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Conserved domains on  [gi|224994269|ref|NP_705731|]
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interleukin-36 gamma [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
IL1 super family cl00094
Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and ...
89-180 1.10e-14

Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and beta are also known as hematopoietin and catabolin. This family also contains interleukin-1 receptor antagonists (inhibitors).


The actual alignment was detected with superfamily member cd00100:

Pssm-ID: 412157  Cd Length: 144  Bit Score: 67.84  E-value: 1.10e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224994269  89 ESLEQDKGIAIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILDLYHHPEPMKPFLFYHTRTGGTSTFESVAFPGHYIASSK 168
Cdd:cd00100   42 QGEESDSKIPVTLGISKTNLYLSCVKEGDDPPLQLEEVPPKDYPKKKITEKRFVFFWEEIGNKNYFESAAFPNWFIATKQ 121
                         90
                 ....*....|...
gi 224994269 169 TGN-PIFLTSKKG 180
Cdd:cd00100  122 EEDkPVFLANGPG 134
 
Name Accession Description Interval E-value
IL1 cd00100
Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and ...
89-180 1.10e-14

Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and beta are also known as hematopoietin and catabolin. This family also contains interleukin-1 receptor antagonists (inhibitors).


Pssm-ID: 238048  Cd Length: 144  Bit Score: 67.84  E-value: 1.10e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224994269  89 ESLEQDKGIAIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILDLYHHPEPMKPFLFYHTRTGGTSTFESVAFPGHYIASSK 168
Cdd:cd00100   42 QGEESDSKIPVTLGISKTNLYLSCVKEGDDPPLQLEEVPPKDYPKKKITEKRFVFFWEEIGNKNYFESAAFPNWFIATKQ 121
                         90
                 ....*....|...
gi 224994269 169 TGN-PIFLTSKKG 180
Cdd:cd00100  122 EEDkPVFLANGPG 134
IL1 pfam00340
Interleukin-1 / 18; This family includes interleukin-1 and interleukin-18.
89-181 5.47e-12

Interleukin-1 / 18; This family includes interleukin-1 and interleukin-18.


Pssm-ID: 395269  Cd Length: 119  Bit Score: 59.77  E-value: 5.47e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224994269   89 ESLEQDKGIAIYLGIQNPDKCLFCkEVNGHPTLLLKEEKILDLYHHPEPMKPFLFYHTRTGGTSTFESVAFPGHYIASSK 168
Cdd:pfam00340  18 KGDSDDSKIPVTLGIKGKKLYLSC-VNKDEPVLQLEEVNIPKLIKNKESDKRFFFIRSESKNYVEFESAAYPGWFIATKQ 96
                          90
                  ....*....|....
gi 224994269  169 TGN-PIFLTSKKGE 181
Cdd:pfam00340  97 EEDlPVFLVNTAGG 110
IL1 smart00125
Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and ...
89-187 2.61e-11

Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and beta are also known as hematopoietin and catabolin.


Pssm-ID: 128430  Cd Length: 147  Bit Score: 58.93  E-value: 2.61e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224994269    89 ESLEQDKGIAIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILDlYHHPEPMKPFLFYHTRTGGTSTFESVAFPGHYIASSK 168
Cdd:smart00125  46 QGEEDDSKIPVTLGISGTNLYLSCVKKGDEPTLQLEMVDPPK-YPKKEMEKRFVFEKHEIGNKVEFESAAHPNWFISTSQ 124
                           90       100
                   ....*....|....*....|
gi 224994269   169 TGN-PIFLTSKKGEYYNINF 187
Cdd:smart00125 125 EEDkPVFLGNGPPSQDITDF 144
PHA02651 PHA02651
IL-1 receptor antagonist; Provisional
51-178 5.03e-09

IL-1 receptor antagonist; Provisional


Pssm-ID: 165031  Cd Length: 165  Bit Score: 53.11  E-value: 5.03e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224994269  51 VFDLDQQVWIFRNQALVTVPRSHRVTPVSVTIlpckypeslEQDKGIAIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILD 130
Cdd:PHA02651  27 IWDVNQKIFYLRNNQLVAGHIQDNSLAEKITA---------KLIDGNDIFLGVKNGEKSLECTEHGDKVTLSLSDKKTNS 97
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 224994269 131 LYHHPEpmKPFLFYHTRTGGTSTFESVAFPGHYIASSKTG--NPIFLTSK 178
Cdd:PHA02651  98 LDENQD--KRFAFIRSDNGHTSTFESVAFPGWFLCTSSGDgiEPVGLTYK 145
 
Name Accession Description Interval E-value
IL1 cd00100
Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and ...
89-180 1.10e-14

Interleukin-1 homologes; Cytokines with various biological functions. Interleukin 1 alpha and beta are also known as hematopoietin and catabolin. This family also contains interleukin-1 receptor antagonists (inhibitors).


Pssm-ID: 238048  Cd Length: 144  Bit Score: 67.84  E-value: 1.10e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224994269  89 ESLEQDKGIAIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILDLYHHPEPMKPFLFYHTRTGGTSTFESVAFPGHYIASSK 168
Cdd:cd00100   42 QGEESDSKIPVTLGISKTNLYLSCVKEGDDPPLQLEEVPPKDYPKKKITEKRFVFFWEEIGNKNYFESAAFPNWFIATKQ 121
                         90
                 ....*....|...
gi 224994269 169 TGN-PIFLTSKKG 180
Cdd:cd00100  122 EEDkPVFLANGPG 134
IL1 pfam00340
Interleukin-1 / 18; This family includes interleukin-1 and interleukin-18.
89-181 5.47e-12

Interleukin-1 / 18; This family includes interleukin-1 and interleukin-18.


Pssm-ID: 395269  Cd Length: 119  Bit Score: 59.77  E-value: 5.47e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224994269   89 ESLEQDKGIAIYLGIQNPDKCLFCkEVNGHPTLLLKEEKILDLYHHPEPMKPFLFYHTRTGGTSTFESVAFPGHYIASSK 168
Cdd:pfam00340  18 KGDSDDSKIPVTLGIKGKKLYLSC-VNKDEPVLQLEEVNIPKLIKNKESDKRFFFIRSESKNYVEFESAAYPGWFIATKQ 96
                          90
                  ....*....|....
gi 224994269  169 TGN-PIFLTSKKGE 181
Cdd:pfam00340  97 EEDlPVFLVNTAGG 110
IL1 smart00125
Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and ...
89-187 2.61e-11

Interleukin-1 homologues; Cytokines with various biological functions. Interluekin 1 alpha and beta are also known as hematopoietin and catabolin.


Pssm-ID: 128430  Cd Length: 147  Bit Score: 58.93  E-value: 2.61e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224994269    89 ESLEQDKGIAIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILDlYHHPEPMKPFLFYHTRTGGTSTFESVAFPGHYIASSK 168
Cdd:smart00125  46 QGEEDDSKIPVTLGISGTNLYLSCVKKGDEPTLQLEMVDPPK-YPKKEMEKRFVFEKHEIGNKVEFESAAHPNWFISTSQ 124
                           90       100
                   ....*....|....*....|
gi 224994269   169 TGN-PIFLTSKKGEYYNINF 187
Cdd:smart00125 125 EEDkPVFLGNGPPSQDITDF 144
PHA02651 PHA02651
IL-1 receptor antagonist; Provisional
51-178 5.03e-09

IL-1 receptor antagonist; Provisional


Pssm-ID: 165031  Cd Length: 165  Bit Score: 53.11  E-value: 5.03e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224994269  51 VFDLDQQVWIFRNQALVTVPRSHRVTPVSVTIlpckypeslEQDKGIAIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILD 130
Cdd:PHA02651  27 IWDVNQKIFYLRNNQLVAGHIQDNSLAEKITA---------KLIDGNDIFLGVKNGEKSLECTEHGDKVTLSLSDKKTNS 97
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 224994269 131 LYHHPEpmKPFLFYHTRTGGTSTFESVAFPGHYIASSKTG--NPIFLTSK 178
Cdd:PHA02651  98 LDENQD--KRFAFIRSDNGHTSTFESVAFPGWFLCTSSGDgiEPVGLTYK 145
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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