|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
534-871 |
1.06e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 62.65 E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 534 EPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPA--SAEEAIPLPASS 611
Cdd:PHA03247 2675 QASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAppAVPAGPATPGGP 2754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 612 DSERSASSVEGPGGAlyARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPP 691
Cdd:PHA03247 2755 ARPARPPTTAGPPAP--APPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPT 2832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 692 GS-EAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPglpeeATALAAPSPPRARARGRgPGLLEPTDAGGPPRSAPE 770
Cdd:PHA03247 2833 SAqPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSP-----AAKPAAPARPPVRRLAR-PAVSRSTESFALPPDQPE 2906
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 771 AASMLAAELRGKTRslgraevALGAQGPREKPAPPQKAKRSVPPASPARAPPATE----TPGPEKAATDLPAPETPRKKT 846
Cdd:PHA03247 2907 RPPQPQAPPPPQPQ-------PQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEpsgaVPQPWLGALVPGRVAVPRFRV 2979
|
330 340
....*....|....*....|....*
gi 604723370 847 PIQKPPRKKSREAAGELGRAGAPTL 871
Cdd:PHA03247 2980 PQPAPSREAPASSTPPLTGHSLSRV 3004
|
|
| FimV |
COG3170 |
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures]; |
679-849 |
2.99e-03 |
|
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 40.93 E-value: 2.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 679 AAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGS--PRTRDPTPRP-PGLPEEATALAAPSP-PRARARGRGPG 754
Cdd:COG3170 117 AAAPAPAPAAPAAAAAAADQPAAEAAPAASGEYYPVRPGDtlWSIAARPVRPsSGVSLDQMMVALYRAnPDAFIDGNINR 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 755 LLE------PTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQgPREKPAPPQKAKRSVpPASPARAPPATETPG 828
Cdd:COG3170 197 LKAgavlrvPAAEEVAALSPAEARQEVQAQSADWAAYRARLAAAVEPA-PAAAAPAAPPAAAAA-AGPVPAAAEDTLSPE 274
|
170 180
....*....|....*....|.
gi 604723370 829 PEKAATDLPAPETPRKKTPIQ 849
Cdd:COG3170 275 VTAAAAAEEADALPEAAAELA 295
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
578-797 |
4.98e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 40.33 E-value: 4.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 578 PEVPTVPAEAPAPSPVPLTTPASAEEAIPlPASSDSERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERR 657
Cdd:pfam17823 222 PAAGTALAAVGNSSPAAGTVTAAVGTVTP-AALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARNPAAPMG 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 658 KPPPPDPATKPKVSWIHGKhsaaaagrAPSPPPPGSEAAPSPSKRKRTPSDKSAhTVEHGSPRTRDPT----PRPPG--L 731
Cdd:pfam17823 301 AQAQGPIIQVSTDQPVHNT--------AGEPTPSPSNTTLEPNTPKSVASTNLA-VVTTTKAQAKEPSaspvPVLHTsmI 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 604723370 732 PE-EATA-LAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQG 797
Cdd:pfam17823 372 PEvEATSpTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPKTLAMASCQLSTQG 439
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
713-860 |
5.63e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 39.75 E-value: 5.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 713 TVEHGSPRTRDPTP---RPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRA 789
Cdd:NF040712 201 TVPRLAREPADARPeevEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEP 280
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 604723370 790 EVALGA-QGPREKPAPPQkakrsvppasparappatetPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAA 860
Cdd:NF040712 281 PAPGAAeTPEAAEPPAPA--------------------PAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRAS 332
|
|
| fibronec_FbpA |
NF033913 |
LPXTG-anchored fibronectin-binding protein FbpA; FbpA, a fibronectin-binding protein described ... |
534-715 |
8.13e-03 |
|
LPXTG-anchored fibronectin-binding protein FbpA; FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
Pssm-ID: 468243 [Multi-domain] Cd Length: 386 Bit Score: 39.67 E-value: 8.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 534 EPPSGlEQPSPSWSSRASFSSFDTTDEGPVYCVPHEE--APAESRDPEVPTVPAeAPAPSPVPLTTPASAEEAIPLPASS 611
Cdd:NF033913 166 ETPSS-ETPAPSIPALPEAPAQSAESEEPSVAASSEEtpSPETPAAPETPEEPA-APAPSPESEPSVAASSEETPSPSTP 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 612 DSERSASSVEGPggalyarvarrearparargeigglslSPSPErrkppppdpatkpkvswihGKHSAAAAGRAPSPPPP 691
Cdd:NF033913 244 AAPETPAESEAP---------------------------AQPAE-------------------SEESSVAATTSPSPSTP 277
|
170 180
....*....|....*....|....*
gi 604723370 692 G-SEAAPSPSKRKrtPSDKSAHTVE 715
Cdd:NF033913 278 AeSETQTPPAVTK--DSDKPSSAAE 300
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
679-765 |
8.44e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.60 E-value: 8.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 679 AAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPeEATALAAPSPPRARARGRGPGLLEP 758
Cdd:NF041121 12 AAQMGRAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAP-YPGSLAPPPPPPPGPAGAAPGAALP 90
|
....*..
gi 604723370 759 TDAGGPP 765
Cdd:NF041121 91 VRVPAPP 97
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
534-871 |
1.06e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 62.65 E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 534 EPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPA--SAEEAIPLPASS 611
Cdd:PHA03247 2675 QASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAppAVPAGPATPGGP 2754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 612 DSERSASSVEGPGGAlyARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPP 691
Cdd:PHA03247 2755 ARPARPPTTAGPPAP--APPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPT 2832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 692 GS-EAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPglpeeATALAAPSPPRARARGRgPGLLEPTDAGGPPRSAPE 770
Cdd:PHA03247 2833 SAqPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSP-----AAKPAAPARPPVRRLAR-PAVSRSTESFALPPDQPE 2906
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 771 AASMLAAELRGKTRslgraevALGAQGPREKPAPPQKAKRSVPPASPARAPPATE----TPGPEKAATDLPAPETPRKKT 846
Cdd:PHA03247 2907 RPPQPQAPPPPQPQ-------PQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEpsgaVPQPWLGALVPGRVAVPRFRV 2979
|
330 340
....*....|....*....|....*
gi 604723370 847 PIQKPPRKKSREAAGELGRAGAPTL 871
Cdd:PHA03247 2980 PQPAPSREAPASSTPPLTGHSLSRV 3004
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
570-852 |
8.75e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.57 E-value: 8.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 570 EAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIPLPASSDSERSassvEGPGGALYARVARREARPARARGEIGGLS 649
Cdd:PHA03247 2590 DAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN----EPDPHPPPTVPPPERPRDDPAPGRVSRPR 2665
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 650 LSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRaPSPPPPGSEAAPSPSKrKRTPSDKSAHTVEHGSPrtrdPTPRPP 729
Cdd:PHA03247 2666 RARRLGRAAQASSPPQRPRRRAARPTVGSLTSLAD-PPPPPPTPEPAPHALV-SATPLPPGPAAARQASP----ALPAAP 2739
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 730 GLPEEATALAAPSPPRARARgrgpgllePTDAGGPPRSAPEAASMLAAElrgktRSLGRAEVALGAQGPREKPAPPQKAK 809
Cdd:PHA03247 2740 APPAVPAGPATPGGPARPAR--------PPTTAGPPAPAPPAAPAAGPP-----RRLTRPAVASLSESRESLPSPWDPAD 2806
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 604723370 810 RSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPP 852
Cdd:PHA03247 2807 PPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPS 2849
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
581-860 |
6.76e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 56.40 E-value: 6.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 581 PTVPAEAPAPSPVPLTTP-ASAEEAIPLPASSDSERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRKP 659
Cdd:PRK07003 374 ARVAGAVPAPGARAAAAVgASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 660 PPPDPAtkpkvswihgkhSAAAAGRAPSPPP-PGSEAAPSPSKR---KRTPSDKSAHTVEHGSPRTRDptPRPPGLPEEA 735
Cdd:PRK07003 454 NARASA------------DSRCDERDAQPPAdSGSASAPASDAPpdaAFEPAPRAAAPSAATPAAVPD--ARAPAAASRE 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 736 TALAAPSPPRARARGRGPGlleptdAGGPPRSAPEAASMLAAeLR--GKTRSLGRAEVAlgaqGPREKPAPPQKAkrsvp 813
Cdd:PRK07003 520 DAPAAAAPPAPEARPPTPA------AAAPAARAGGAAAALDV-LRnaGMRVSSDRGARA----AAAAKPAAAPAA----- 583
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 604723370 814 pasparappaTETPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAA 860
Cdd:PRK07003 584 ----------APKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAA 620
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
671-852 |
2.70e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 2.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 671 SWIHGKHSAAAaGRAPSPPPPGSEAAPSPSKRKRTPSDKSAhtvehgsPRTRDPT----PRPPGLPEEATALAAPSPPRA 746
Cdd:PHA03247 2535 TWIRGLEELAS-DDAGDPPPPLPPAAPPAAPDRSVPPPRPA-------PRPSEPAvtsrARRPDAPPQSARPRAPVDDRG 2606
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 747 RARGRGPGLLEPTDAGGPPRSAPEAASmlaaelRGKTRSLGRAEVALGAQGPREKPAPPQ--KAKRSVPPASPARAPPAT 824
Cdd:PHA03247 2607 DPRGPAPPSPLPPDTHAPDPPPPSPSP------AANEPDPHPPPTVPPPERPRDDPAPGRvsRPRRARRLGRAAQASSPP 2680
|
170 180
....*....|....*....|....*...
gi 604723370 825 ETPGPeKAATDLPAPETPRKKTPIQKPP 852
Cdd:PHA03247 2681 QRPRR-RAARPTVGSLTSLADPPPPPPT 2707
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
678-853 |
5.41e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 50.26 E-value: 5.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 678 SAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSP-PRARARGRGPGLL 756
Cdd:PRK12323 393 AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPaAAARPAAAGPRPV 472
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 757 EPTDAGGPPRSAPEAASMLAA-------ELRGKTRSLGRAEVALG------AQGPREKPAPPQKAKrsvppasparappa 823
Cdd:PRK12323 473 AAAAAAAPARAAPAAAPAPADddpppweELPPEFASPAPAQPDAApagwvaESIPDPATADPDDAF-------------- 538
|
170 180 190
....*....|....*....|....*....|
gi 604723370 824 tETPGPEKAATDLPAPETPRKKTPIQKPPR 853
Cdd:PRK12323 539 -ETLAPAPAAAPAPRAAAATEPVVAPRPPR 567
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
675-869 |
1.61e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.83 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 675 GKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHtvehgSPRTRDPTPRPPGLPEEATALAAPSPPRARARGRGPG 754
Cdd:PRK07764 605 SSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAA-----PAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPA 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 755 LLEPTDAGGPPRS-APEAASMLAAELRGKTRSLGRAEVALGAQGPREKPAPPQkakrSVPPASPARAPPATETPGPEKAA 833
Cdd:PRK07764 680 APPPAPAPAAPAApAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPS----PAADDPVPLPPEPDDPPDPAGAP 755
|
170 180 190
....*....|....*....|....*....|....*.
gi 604723370 834 TDLPAPETPRKKTPIQKPPRKKSREAAGELGRAGAP 869
Cdd:PRK07764 756 AQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAP 791
|
|
| flhF |
PRK06995 |
flagellar biosynthesis protein FlhF; |
731-864 |
2.47e-05 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 47.65 E-value: 2.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 731 LPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAelrgKTRSLGRAEVALGAQGPREKPAPPQKAKR 810
Cdd:PRK06995 43 LADSDLAALAPPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLVE----HAKRLTAQREQLVARAAAPAAPEAQAPAA 118
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 604723370 811 SVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKP-PRKKSREAAGELG 864
Cdd:PRK06995 119 PAERAAAENAARRLARAAAAAPRPRVPADAAAAVADAVKARiERIVNDTVMQELR 173
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
678-779 |
4.97e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.02 E-value: 4.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 678 SAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARGRGPGLLE 757
Cdd:PRK14951 388 APAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVA 467
|
90 100
....*....|....*....|....*.
gi 604723370 758 P----TDAGGPPRSAPEAASMLAAEL 779
Cdd:PRK14951 468 PepavASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
678-866 |
5.98e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 5.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 678 SAAAAGRAPSPPPPGSEAAPS--PSKRKRTPSDKSAHTVEH----GSPRTRDPTPRPPGLPEEATALAAPSPPRARARGR 751
Cdd:PRK07764 616 AAPAAPAAPAAPAPAGAAAAPaeASAAPAPGVAAPEHHPKHvavpDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAG 695
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 752 GPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATETPGPEK 831
Cdd:PRK07764 696 AAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
|
170 180 190
....*....|....*....|....*....|....*
gi 604723370 832 AATDLPAPETPRKKTPiqkPPRKKSREAAGELGRA 866
Cdd:PRK07764 776 PSPPSEEEEMAEDDAP---SMDDEDRRDAEEVAME 807
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
679-871 |
1.65e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.25 E-value: 1.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 679 AAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAhtvehgsprtRDPTPRPPglpeeatALAAPSPPRARARGRGPGLLEP 758
Cdd:PRK12323 388 AAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVA----------AAPARRSP-------APEALAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 759 TDAGGP---PRSAPEAASMLAAELRGKTRSLGRAEVALGAQGPREKP----APPQKAKRSVPPASPARAPPATET---PG 828
Cdd:PRK12323 451 APAPAAapaAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPpweeLPPEFASPAPAQPDAAPAGWVAESipdPA 530
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 604723370 829 PEKAATDLPAPETPRKKTPIQKPPRKKSREAAGELGRAGAPTL 871
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGL 573
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
566-789 |
3.67e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 3.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 566 VPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALYARVARREARPARARGEI 645
Cdd:PHA03307 194 PPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEAS 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 646 GGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPP--PPGSEAAPSPSKRKRTPSDKSAHTvehGSPRTRD 723
Cdd:PHA03307 274 GWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSssSSRESSSSSTSSSSESSRGAAVSP---GPSPSRS 350
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 604723370 724 PTPRPPGLPeeatalAAPSPPRARARGRGPGllePTDAGGPPRSAPEAASMLAAEL---RGKTRSLGRA 789
Cdd:PHA03307 351 PSPSRPPPP------ADPSSPRKRPRPSRAP---SSPAASAGRPTRRRARAAVAGRarrRDATGRFPAG 410
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
678-794 |
5.04e-04 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 43.75 E-value: 5.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 678 SAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRtRDPTPRPPGL--PEEATALAAPSPPRARARGRGPGL 755
Cdd:PRK01297 20 APPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPR-RERKPKPASLwkLEDFVVEPQEGKTRFHDFNLAPEL 98
|
90 100 110
....*....|....*....|....*....|....*....
gi 604723370 756 LEPTDAGGPPRSAPEAASMLAAELRGKTrSLGRAEVALG 794
Cdd:PRK01297 99 MHAIHDLGFPYCTPIQAQVLGYTLAGHD-AIGRAQTGTG 136
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
678-752 |
5.49e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 43.78 E-value: 5.49e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 604723370 678 SAAAAGRAPSPPPPGSEAAPSPSKRKRtPSDKSAHTVEHGS---PRTRDPTPRPPGLPEEATAlaapSPPRARARGRG 752
Cdd:PRK14954 387 SPDVKKKAPEPDLPQPDRHPGPAKPEA-PGARPAELPSPASaptPEQQPPVARSAPLPPSPQA----SAPRNVASGKP 459
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
563-804 |
5.96e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 5.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 563 VYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGAlyarvARREARPARAR 642
Cdd:PRK07764 584 VEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGV-----AAPEHHPKHVA 658
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 643 GEIGGLSLSPSPERRKPPPPDPATKPKVSWihgkHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTR 722
Cdd:PRK07764 659 VPDASDGGDGWPAKAGGAAPAAPPPAPAPA----APAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPA 734
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 723 -DPTPRPPGLPEEATALA-----APSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVA--LG 794
Cdd:PRK07764 735 aDDPVPLPPEPDDPPDPAgapaqPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAMELLEeeLG 814
|
250
....*....|
gi 604723370 795 AQGPREKPAP 804
Cdd:PRK07764 815 AKKIEEFAAD 824
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
559-779 |
6.14e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.33 E-value: 6.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 559 DEGPVYCVPHEEAPAESRDPEVPTVPAE--APAPSPVPLTTPASAEEAIPLPASSDSERSASSVEGPGGALYARVARREA 636
Cdd:PRK12323 384 QPAPAAAAPAAAAPAPAAPPAAPAAAPAaaAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAAR 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 637 RPARARGEIGGLSLSPSPERRKppppdpatkpkvswihgkhsAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEH 716
Cdd:PRK12323 464 PAAAGPRPVAAAAAAAPARAAP--------------------AAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVA 523
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 604723370 717 GS---PRTRDPTPRPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPE----AASM----LAAEL 779
Cdd:PRK12323 524 ESipdPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDwpalAARLpvrgLAQQL 597
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
676-853 |
7.63e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.14 E-value: 7.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 676 KHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPR-------TRDPTP-------------RPPGLPEEA 735
Cdd:PTZ00449 506 KHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGetkegevGKKPGPakehkpskiptlsKKPEFPKDP 585
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 736 TALAAPSPPRARARGRGPGllEPTDAGGPPRsaPEAASMlaaelrgkTRSLGRAEvalGAQGPReKPAPPQKAKrsvppa 815
Cdd:PTZ00449 586 KHPKDPEEPKKPKRPRSAQ--RPTRPKSPKL--PELLDI--------PKSPKRPE---SPKSPK-RPPPPQRPS------ 643
|
170 180 190
....*....|....*....|....*....|....*....
gi 604723370 816 sparappatetpGPEKaatdlpaPETPRK-KTPiqKPPR 853
Cdd:PTZ00449 644 ------------SPER-------PEGPKIiKSP--KPPK 661
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
697-869 |
1.01e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 697 PSPSKRKRTPSDKSAHTVEHGSPRTRDPTP--RPPGLPEEATALAAPSPPRARARGRGPGlleptdAGGPPRSAPEAASM 774
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPAPAAAAPAAaaPAPAAPPAAPAAAPAAAAAARAVAAAPA------RRSPAPEALAAARQ 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 775 LAAELRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPPRK 854
Cdd:PRK12323 439 ASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAP 518
|
170
....*....|....*
gi 604723370 855 KSREAAGELGRAGAP 869
Cdd:PRK12323 519 AGWVAESIPDPATAD 533
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
717-869 |
1.12e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 717 GSPRTRDPTPRPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEvalgAQ 796
Cdd:PRK07003 365 GGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR----GD 440
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 604723370 797 GPREKPAPPQKAKrSVPPASPARAPPATETPGPEKAATDLPAPETPrkktpiqKPPRKKSREAAGELGRAGAP 869
Cdd:PRK07003 441 DAADGDAPVPAKA-NARASADSRCDERDAQPPADSGSASAPASDAP-------PDAAFEPAPRAAAPSAATPA 505
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
534-869 |
1.97e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.08 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 534 EPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPlttPASAEEAIPLPASSDS 613
Cdd:PHA03307 62 CDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPP---PASPPPSPAPDLSEML 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 614 ERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGS 693
Cdd:PHA03307 139 RPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASAS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 694 EAAPSPSKRKRTP----SDKSAHTVEHGS---PRTRDPTPRP-----------PGLPEEATALAAPSPPRARARGRGPGL 755
Cdd:PHA03307 219 SPAPAPGRSAADDagasSSDSSSSESSGCgwgPENECPLPRPapitlptriweASGWNGPSSRPGPASSSSSPRERSPSP 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 756 LEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPAT-ETPGPEKAAT 834
Cdd:PHA03307 299 SPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKrPRPSRAPSSP 378
|
330 340 350
....*....|....*....|....*....|....*
gi 604723370 835 DLPAPETPRKKTPIQKPPRKKSREAAGELGRAGAP 869
Cdd:PHA03307 379 AASAGRPTRRRARAAVAGRARRRDATGRFPAGRPR 413
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
670-870 |
2.21e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 670 VSWIHGKHSAAAAGRAPSPPPPGSEAAPSPskrKRTPSDKSAHTVehgsPRTRDPTPRPPGLPEEATALAAPSPPRARAR 749
Cdd:PRK07764 584 VEAVVGPAPGAAGGEGPPAPASSGPPEEAA---RPAAPAAPAAPA----APAPAGAAAAPAEASAAPAPGVAAPEHHPKH 656
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 750 GRGPGllEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQGPREKPAPPqkAKRSVPPASPARAPPATETPGP 829
Cdd:PRK07764 657 VAVPD--ASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPP--AGQADDPAAQPPQAAQGASAPS 732
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 604723370 830 EKAATDLPAPETPRKKTPIQKPPRKKSREAAGELGRAGAPT 870
Cdd:PRK07764 733 PAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAA 773
|
|
| flhF |
PRK06995 |
flagellar biosynthesis protein FlhF; |
677-772 |
2.35e-03 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 41.49 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 677 HSAAAAGRAPSPPPPgsEAAPSPSKRKRTPSDKSA-HTVEHGSPRT--RDPTPRPPGLPEEATAlAAPSPPRARARGRGP 753
Cdd:PRK06995 52 APPAAAAPAAAQPPP--AAAPAAVSRPAAPAAEPApWLVEHAKRLTaqREQLVARAAAPAAPEA-QAPAAPAERAAAENA 128
|
90
....*....|....*....
gi 604723370 754 GLLEPTDAGGPPRSAPEAA 772
Cdd:PRK06995 129 ARRLARAAAAAPRPRVPAD 147
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
678-868 |
2.49e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.76 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 678 SAAAAGRAPSPPPPGseAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPsPPRARARGRGPGLLE 757
Cdd:PRK07003 364 GGGAPGGGVPARVAG--AVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEA-PPAAPAPPATADRGD 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 758 PTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLP 837
Cdd:PRK07003 441 DAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASRED 520
|
170 180 190
....*....|....*....|....*....|.
gi 604723370 838 APETPRKKTPIQKPPRKKSREAAGELGRAGA 868
Cdd:PRK07003 521 APAAAAPPAPEARPPTPAAAAPAARAGGAAA 551
|
|
| FimV |
COG3170 |
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures]; |
679-849 |
2.99e-03 |
|
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 40.93 E-value: 2.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 679 AAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGS--PRTRDPTPRP-PGLPEEATALAAPSP-PRARARGRGPG 754
Cdd:COG3170 117 AAAPAPAPAAPAAAAAAADQPAAEAAPAASGEYYPVRPGDtlWSIAARPVRPsSGVSLDQMMVALYRAnPDAFIDGNINR 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 755 LLE------PTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQgPREKPAPPQKAKRSVpPASPARAPPATETPG 828
Cdd:COG3170 197 LKAgavlrvPAAEEVAALSPAEARQEVQAQSADWAAYRARLAAAVEPA-PAAAAPAAPPAAAAA-AGPVPAAAEDTLSPE 274
|
170 180
....*....|....*....|.
gi 604723370 829 PEKAATDLPAPETPRKKTPIQ 849
Cdd:COG3170 275 VTAAAAAEEADALPEAAAELA 295
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
578-797 |
4.98e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 40.33 E-value: 4.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 578 PEVPTVPAEAPAPSPVPLTTPASAEEAIPlPASSDSERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERR 657
Cdd:pfam17823 222 PAAGTALAAVGNSSPAAGTVTAAVGTVTP-AALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARNPAAPMG 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 658 KPPPPDPATKPKVSWIHGKhsaaaagrAPSPPPPGSEAAPSPSKRKRTPSDKSAhTVEHGSPRTRDPT----PRPPG--L 731
Cdd:pfam17823 301 AQAQGPIIQVSTDQPVHNT--------AGEPTPSPSNTTLEPNTPKSVASTNLA-VVTTTKAQAKEPSaspvPVLHTsmI 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 604723370 732 PE-EATA-LAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQG 797
Cdd:pfam17823 372 PEvEATSpTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDPKTLAMASCQLSTQG 439
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
713-860 |
5.63e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 39.75 E-value: 5.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 713 TVEHGSPRTRDPTP---RPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRA 789
Cdd:NF040712 201 TVPRLAREPADARPeevEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEP 280
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 604723370 790 EVALGA-QGPREKPAPPQkakrsvppasparappatetPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAA 860
Cdd:NF040712 281 PAPGAAeTPEAAEPPAPA--------------------PAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRAS 332
|
|
| fibronec_FbpA |
NF033913 |
LPXTG-anchored fibronectin-binding protein FbpA; FbpA, a fibronectin-binding protein described ... |
534-715 |
8.13e-03 |
|
LPXTG-anchored fibronectin-binding protein FbpA; FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
Pssm-ID: 468243 [Multi-domain] Cd Length: 386 Bit Score: 39.67 E-value: 8.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 534 EPPSGlEQPSPSWSSRASFSSFDTTDEGPVYCVPHEE--APAESRDPEVPTVPAeAPAPSPVPLTTPASAEEAIPLPASS 611
Cdd:NF033913 166 ETPSS-ETPAPSIPALPEAPAQSAESEEPSVAASSEEtpSPETPAAPETPEEPA-APAPSPESEPSVAASSEETPSPSTP 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 612 DSERSASSVEGPggalyarvarrearparargeigglslSPSPErrkppppdpatkpkvswihGKHSAAAAGRAPSPPPP 691
Cdd:NF033913 244 AAPETPAESEAP---------------------------AQPAE-------------------SEESSVAATTSPSPSTP 277
|
170 180
....*....|....*....|....*
gi 604723370 692 G-SEAAPSPSKRKrtPSDKSAHTVE 715
Cdd:NF033913 278 AeSETQTPPAVTK--DSDKPSSAAE 300
|
|
| SAV_2336_NTERM |
NF041121 |
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
679-765 |
8.44e-03 |
|
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.
Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.60 E-value: 8.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 679 AAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPeEATALAAPSPPRARARGRGPGLLEP 758
Cdd:NF041121 12 AAQMGRAAAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAP-YPGSLAPPPPPPPGPAGAAPGAALP 90
|
....*..
gi 604723370 759 TDAGGPP 765
Cdd:NF041121 91 VRVPAPP 97
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
534-870 |
8.80e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 39.67 E-value: 8.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 534 EPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIPLPASSDS 613
Cdd:PHA03378 653 QPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPG 732
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 614 ERSAssvegPGGAlyarvarrearparargeigglslsPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPgs 693
Cdd:PHA03378 733 RARP-----PAAA-------------------------PGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPP-- 780
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 694 EAAPSPSKRKRtpsdksahtvehGSPRtrdPTPRPPGLPEEATALaapspPRARARGRGPglleptdaggpprsapeAAS 773
Cdd:PHA03378 781 QAPPAPQQRPR------------GAPT---PQPPPQAGPTSMQLM-----PRAAPGQQGP-----------------TKQ 823
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 774 MLAAELRGKTRSlGRAEVALGAQGPREKPAPPQKakrsvppasparappateTPGPEKAATDLPAPE-TPRKKTPIQKPP 852
Cdd:PHA03378 824 ILRQLLTGGVKR-GRPSLKKPAALERQAAAGPTP------------------SPGSGTSDKIVQAPVfYPPVLQPIQVMR 884
|
330
....*....|....*...
gi 604723370 853 RKKSREAAGELGRAGAPT 870
Cdd:PHA03378 885 QLGSVRAAAASTVTQAPT 902
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
690-871 |
9.02e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 39.67 E-value: 9.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 690 PPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTrdPTP-RPPGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSA 768
Cdd:PHA03378 669 IGHIPYQPSPTGANTMLPIQWAPGTMQPPPRA--PTPmRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARP 746
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 769 PEAASMLAAELRGKTRSLGRAEVALGAQGPREKP-APPQKAKRsvppasparaPPATETPGPEKAATDLPAPETPRKKTP 847
Cdd:PHA03378 747 PAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPqAPPAPQQR----------PRGAPTPQPPPQAGPTSMQLMPRAAPG 816
|
170 180
....*....|....*....|....
gi 604723370 848 IQKPPRKKSREAAGELGRAGAPTL 871
Cdd:PHA03378 817 QQGPTKQILRQLLTGGVKRGRPSL 840
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
679-860 |
9.96e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 39.92 E-value: 9.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 679 AAAAGRAPSPPPPGSEAAPsPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLP--------EEATALAAPSP-PRARAR 749
Cdd:PHA03247 268 APETARGATGPPPPPEAAA-PNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPagdaeeedDEDGAMEVVSPlPRPRQH 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 604723370 750 ------------GRGPGLLEPTDAG-GPPRSAPEAASMLAAELRGKTRSlgrAEVALGAQGPREKPAPPQKAKRSVPPAS 816
Cdd:PHA03247 347 yplgfpkrrrptWTPPSSLEDLSAGrHHPKRASLPTRKRRSARHAATPF---ARGPGGDDQTRPAAPVPASVPTPAPTPV 423
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 604723370 817 PARAPPATETPGP--EKAATDLPAPETPRKKTPIQKPPRKKSREAA 860
Cdd:PHA03247 424 PASAPPPPATPLPsaEPGSDDGPAPPPERQPPAPATEPAPDDPDDA 469
|
|
| |
