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Conserved domains on  [gi|121583639|ref|NP_666173|]
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proline-rich protein 5 isoform 1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
HbrB super family cl09599
HbrB-like; HbrB is involved hyphal growth and polarity.
40-159 1.14e-15

HbrB-like; HbrB is involved hyphal growth and polarity.


The actual alignment was detected with superfamily member pfam08539:

Pssm-ID: 430059  Cd Length: 159  Bit Score: 73.79  E-value: 1.14e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583639   40 ANATWNSIHNGVIAVFQRKGLPdqeLFI--LNEGVRQ--LLKTELGS--FFTEYLQnQLLTKGMVILRDKIRFYEGQKLL 113
Cdd:pfam08539   1 ADDAWPLLCARVLPLFNGEDLR---VPIedLNRLVSFhiQLCIQRRApnSLLEDLE-ELLTTGFYTLNNTLSFVPDERLL 76
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 121583639  114 DSLAETWDFFFSDVLPTLQAIFYPVQ------------------------------GKEPSVRQLALLHFRNTITL 159
Cdd:pfam08539  77 PRLVEIWLFFYTQVLPYLEAVFLPLDtefkgrgllmtpeqapaspsssspasvstlSEVLDVRRLLLIAFRDSVIL 152
 
Name Accession Description Interval E-value
HbrB pfam08539
HbrB-like; HbrB is involved hyphal growth and polarity.
40-159 1.14e-15

HbrB-like; HbrB is involved hyphal growth and polarity.


Pssm-ID: 430059  Cd Length: 159  Bit Score: 73.79  E-value: 1.14e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583639   40 ANATWNSIHNGVIAVFQRKGLPdqeLFI--LNEGVRQ--LLKTELGS--FFTEYLQnQLLTKGMVILRDKIRFYEGQKLL 113
Cdd:pfam08539   1 ADDAWPLLCARVLPLFNGEDLR---VPIedLNRLVSFhiQLCIQRRApnSLLEDLE-ELLTTGFYTLNNTLSFVPDERLL 76
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 121583639  114 DSLAETWDFFFSDVLPTLQAIFYPVQ------------------------------GKEPSVRQLALLHFRNTITL 159
Cdd:pfam08539  77 PRLVEIWLFFYTQVLPYLEAVFLPLDtefkgrgllmtpeqapaspsssspasvstlSEVLDVRRLLLIAFRDSVIL 152
 
Name Accession Description Interval E-value
HbrB pfam08539
HbrB-like; HbrB is involved hyphal growth and polarity.
40-159 1.14e-15

HbrB-like; HbrB is involved hyphal growth and polarity.


Pssm-ID: 430059  Cd Length: 159  Bit Score: 73.79  E-value: 1.14e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121583639   40 ANATWNSIHNGVIAVFQRKGLPdqeLFI--LNEGVRQ--LLKTELGS--FFTEYLQnQLLTKGMVILRDKIRFYEGQKLL 113
Cdd:pfam08539   1 ADDAWPLLCARVLPLFNGEDLR---VPIedLNRLVSFhiQLCIQRRApnSLLEDLE-ELLTTGFYTLNNTLSFVPDERLL 76
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 121583639  114 DSLAETWDFFFSDVLPTLQAIFYPVQ------------------------------GKEPSVRQLALLHFRNTITL 159
Cdd:pfam08539  77 PRLVEIWLFFYTQVLPYLEAVFLPLDtefkgrgllmtpeqapaspsssspasvstlSEVLDVRRLLLIAFRDSVIL 152
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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