kinesin light chain 4 isoform c [Homo sapiens]
tetratricopeptide repeat protein( domain architecture ID 12321303)
tetratricopeptide repeat (TPR) protein may adopt a right-handed helical structure with an amphipathic channel and may function as an interaction scaffold in the formation of multi-protein complexes
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
TPR_12 | pfam13424 | Tetratricopeptide repeat; |
210-285 | 1.33e-11 | ||||
Tetratricopeptide repeat; : Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 59.32 E-value: 1.33e-11
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Spy super family | cl27809 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
134-294 | 6.80e-04 | ||||
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; The actual alignment was detected with superfamily member COG3914: Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 41.13 E-value: 6.80e-04
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SMC_prok_B super family | cl37069 | chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
33-148 | 1.04e-03 | ||||
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] The actual alignment was detected with superfamily member TIGR02168: Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 1.04e-03
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Name | Accession | Description | Interval | E-value | ||||
TPR_12 | pfam13424 | Tetratricopeptide repeat; |
210-285 | 1.33e-11 | ||||
Tetratricopeptide repeat; Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 59.32 E-value: 1.33e-11
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
208-294 | 4.97e-07 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 51.07 E-value: 4.97e-07
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
208-292 | 3.24e-06 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 48.76 E-value: 3.24e-06
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Spy | COG3914 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
208-294 | 7.91e-06 | ||||
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 47.30 E-value: 7.91e-06
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
203-292 | 1.03e-05 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 46.84 E-value: 1.03e-05
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
201-292 | 1.95e-05 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 46.07 E-value: 1.95e-05
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
216-294 | 5.51e-04 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 41.44 E-value: 5.51e-04
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Spy | COG3914 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
134-294 | 6.80e-04 | ||||
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 41.13 E-value: 6.80e-04
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
223-294 | 8.70e-04 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 41.06 E-value: 8.70e-04
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
223-292 | 9.01e-04 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 41.06 E-value: 9.01e-04
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SMC_prok_B | TIGR02168 | chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
33-148 | 1.04e-03 | ||||
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 1.04e-03
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COG5283 | COG5283 | Phage-related tail protein [Mobilome: prophages, transposons]; |
27-151 | 2.06e-03 | ||||
Phage-related tail protein [Mobilome: prophages, transposons]; Pssm-ID: 444094 [Multi-domain] Cd Length: 747 Bit Score: 39.84 E-value: 2.06e-03
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Name | Accession | Description | Interval | E-value | ||||
TPR_12 | pfam13424 | Tetratricopeptide repeat; |
210-285 | 1.33e-11 | ||||
Tetratricopeptide repeat; Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 59.32 E-value: 1.33e-11
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TPR_10 | pfam13374 | Tetratricopeptide repeat; |
252-292 | 1.11e-08 | ||||
Tetratricopeptide repeat; Pssm-ID: 463861 [Multi-domain] Cd Length: 42 Bit Score: 50.19 E-value: 1.11e-08
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
208-294 | 4.97e-07 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 51.07 E-value: 4.97e-07
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
208-292 | 3.24e-06 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 48.76 E-value: 3.24e-06
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Spy | COG3914 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
208-294 | 7.91e-06 | ||||
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 47.30 E-value: 7.91e-06
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
203-292 | 1.03e-05 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 46.84 E-value: 1.03e-05
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TPR_10 | pfam13374 | Tetratricopeptide repeat; |
211-251 | 1.13e-05 | ||||
Tetratricopeptide repeat; Pssm-ID: 463861 [Multi-domain] Cd Length: 42 Bit Score: 41.72 E-value: 1.13e-05
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
201-292 | 1.95e-05 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 46.07 E-value: 1.95e-05
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Spy | COG3914 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
208-294 | 6.39e-05 | ||||
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 44.60 E-value: 6.39e-05
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TPR_12 | pfam13424 | Tetratricopeptide repeat; |
251-296 | 1.36e-04 | ||||
Tetratricopeptide repeat; Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 39.68 E-value: 1.36e-04
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
208-283 | 1.39e-04 | ||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 42.69 E-value: 1.39e-04
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
208-282 | 2.07e-04 | ||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 41.92 E-value: 2.07e-04
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
208-282 | 3.48e-04 | ||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 41.53 E-value: 3.48e-04
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
216-294 | 5.51e-04 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 41.44 E-value: 5.51e-04
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Spy | COG3914 | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
134-294 | 6.80e-04 | ||||
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 41.13 E-value: 6.80e-04
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
223-294 | 8.70e-04 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 41.06 E-value: 8.70e-04
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FxSxx_TPR | NF040586 | FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
223-292 | 9.01e-04 | ||||
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids. Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 41.06 E-value: 9.01e-04
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SMC_prok_B | TIGR02168 | chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
33-148 | 1.04e-03 | ||||
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 1.04e-03
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COG5283 | COG5283 | Phage-related tail protein [Mobilome: prophages, transposons]; |
27-151 | 2.06e-03 | ||||
Phage-related tail protein [Mobilome: prophages, transposons]; Pssm-ID: 444094 [Multi-domain] Cd Length: 747 Bit Score: 39.84 E-value: 2.06e-03
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PilF | COG3063 | Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
208-287 | 2.69e-03 | ||||
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 36.69 E-value: 2.69e-03
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TPR_16 | pfam13432 | Tetratricopeptide repeat; This family is found predominantly at the C-terminus of ... |
221-280 | 5.68e-03 | ||||
Tetratricopeptide repeat; This family is found predominantly at the C-terminus of transglutaminase enzyme core regions. Pssm-ID: 433202 [Multi-domain] Cd Length: 68 Bit Score: 35.00 E-value: 5.68e-03
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Blast search parameters | ||||
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