|
Name |
Accession |
Description |
Interval |
E-value |
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
51-512 |
2.23e-126 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 376.18 E-value: 2.23e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 51 LHTSPLSKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKEEGWYLELGPMRIPESHKLIHTYVQKLG 130
Cdd:COG1231 1 MSRRARGKDVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGGRVWTLRFGDDGLYAELGAMRIPPSHTNLLALARELG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 131 LKLNKFHQYDSNTWYLLNGQRYRASEVMANPGILGyplrpseknktvtDLFYQAITKIKphRKTSNCSQLLSLYDSYSTK 210
Cdd:COG1231 81 LPLEPFPNENGNALLYLGGKRVRAGEIAADLRGVA-------------ELLAKLLRALA--AALDPWAHPAAELDRESLA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 211 AYLMKEGtLSKGAIEMIGDIMNENAG---YYKSLLESLRIASIFSKSDQFSEITGGFDQLPNGLSASLkPGTIRLGSKVE 287
Cdd:COG1231 146 EWLRRNG-ASPSARRLLGLLGAGEYGadpDELSLLDLLRYAASAGGGAQQFRIVGGMDQLPRALAAEL-GDRIRLGAPVT 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 288 RVVRDGPKVKVMYRTDGptsalhKLTADYAIITASAKATRLITFQPPLSREKTHALRSVHYTSATKVVLVCNERFWEQDG 367
Cdd:COG1231 224 RIRQDGDGVTVTTDDGG------TVRADAVIVTVPPSVLRRIEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWEEDG 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 368 IRGGYSITDRPSRFIYYPSHSLPGGKGVLLaSFTVGDDSSFFAALKPNQVVDVVLDDLAAVHRIPKEELKRmcpkSAIKH 447
Cdd:COG1231 298 LYGGISLTDLPIRQTWYPSNGPDGGAGVLL-GYVGGDDARALAALSPEERVAAALEQLARIFGVYAAEPVD----YVSTD 372
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 227500024 448 WSLDPLTIGAFTEFTPYQFVDYSKQLSQPEGRIYFAGEHTCLP-HSWIDTAIKSGIRASCNIQAAV 512
Cdd:COG1231 373 WGRDPWSRGAYAAAPPGQLTAAGPALAEPDGRIHFAGEHTSDEwPGWVEGALESGERAAAEILARL 438
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
67-508 |
2.50e-77 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 250.10 E-value: 2.50e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 67 MAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRnkEEGWYLELGPMRIPESHKLIHTYVQKLGLKLNKFHQyDSNTWYL 146
Cdd:pfam01593 1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVR--DDGFLIELGAMWFHGAQPPLLALLKELGLEDRLVLP-DPAPFYT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 147 L---NGQRYRAsEVMANPGIL------GYPLRPSEKNKTVTDLFYQAITKIKPhrktsncsqllslYDSYSTKAYLMKEG 217
Cdd:pfam01593 78 VlfaGGRRYPG-DFRRVPAGWegllefGRLLSIPEKLRLGLAALASDALDEFD-------------LDDFSLAESLLFLG 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 218 TLSKGAIEMIGDIMNENA--------GYYKSLLESLRIASIFSKSDQFSE-------ITGGFDQLPNGLSASLKPGTIRL 282
Cdd:pfam01593 144 RRGPGDVEVWDRLIDPELfaalpfasGAFAGDPSELSAGLALPLLWALLGeggslllPRGGLGALPDALAAQLLGGDVRL 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 283 GSKVERVVRDGPKVKVMYrTDGptsalHKLTADYAIITASAKATRLITFQPPLSREKTHALRSVHYTSATKVVLVCNERF 362
Cdd:pfam01593 224 NTRVRSIDREGDGVTVTL-TDG-----EVIEADAVIVTVPLGVLKRILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKF 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 363 WEQDGIRG--GYSITDRPSRFIY--YPSHSLPGGKGVLLASFTVGDDSSFFAALKPNQVVDVVLDDLAAVHRIPKEELKR 438
Cdd:pfam01593 298 WPDLGLLGllSELLTGLGTAFSWltFPNRAPPGKGLLLLVYVGPGDRARELEGLSDEELLQAVLRDLRKLFGEEAPEPLR 377
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 227500024 439 MCpksaIKHWSLDPLTIGAFTEFTPYQF-VDYSKQLSQPEGRIYFAGEHTC--LPHSwIDTAIKSGIRASCNI 508
Cdd:pfam01593 378 VL----VSDWHTDPWPRGSYSLPQYGPGhDDYRPLARTPDPGLFFAGEHTStgYPGT-VEGAIESGRRAARAV 445
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
57-436 |
1.15e-29 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 121.09 E-value: 1.15e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 57 SKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRnkEEGWYLELGP----MRIPESHKLIHtyvqKLGLK 132
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIRTVE--VDGFRIDRGPhsflTRDPEVLELLR----ELGLG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 133 LNKFHQYDSNTWYLLNGQRYR----ASEVMANPGI---------LGY--PLRPSEKNKTVTDLFYQAITK------IKPh 191
Cdd:COG1232 75 DELVWPNTRKSYIYYGGKLHPlpqgPLALLRSPLLslagklralLELlaPRRPPGEDESLAEFVRRRFGRevyerlVEP- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 192 rktsncsqLLSLYdsYSTKAYlmkegTLSKGAI-EMIGDIMNEnagyYKSLLES-LRIASIFSKSDQFSEITGGFDQLPN 269
Cdd:COG1232 154 --------LLEGV--YAGDPD-----ELSADWAfPRLKRLELE----HGSLIKGaLALRKGAKAGEVFGYLRGGLGTLVE 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 270 GLSASLKPGTIRLGSKVERVVRDGPKVKVMYRtDGPTsalhkLTADYAIITASAKAT-RLItfqPPLSREKTHALRSVHY 348
Cdd:COG1232 215 ALAEALEAGEIRLGTRVTAIEREGGGWRVTTS-DGET-----IEADAVVSATPAPALaRLL---APLPPEVAAALAGIPY 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 349 TSATKVVLVCN-ERFWEQDGIrgGYSITDRPSRFIY---YPS----HSLPGGKGVLLAS-FTVGDDSsfFAALKPNQVVD 419
Cdd:COG1232 286 ASVAVVALGFDrPDLPPPDGF--GWLVPRDEGVPILavtFSSnkwpHRAPDGKVLLRLEvGGAGDPE--LWQLSDEELVA 361
|
410
....*....|....*..
gi 227500024 420 VVLDDLAAVHRIPKEEL 436
Cdd:COG1232 362 LALADLRKLLGIDAEPV 378
|
|
| PLN02676 |
PLN02676 |
polyamine oxidase |
44-520 |
9.08e-20 |
|
polyamine oxidase
Pssm-ID: 215362 [Multi-domain] Cd Length: 487 Bit Score: 92.09 E-value: 9.08e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 44 LLIAQNGLHTSPLSKRVVVVGAGMAGLVAAKTLQDAGHE-VTILEASNHIGGRVvtlrNKEE--GWYLELGPMRI----- 115
Cdd:PLN02676 13 VHLFAVAAMDAKPSPSVIIVGAGMSGISAAKTLSEAGIEdILILEATDRIGGRM----RKANfaGVSVELGANWVegvgg 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 116 PESHKlIHTYVQKLGLK--LNKFHQYDSNTwYLLNGQRYrasevmanpgilgyplrpseKNKTVTDLFYQAITKIKphrK 193
Cdd:PLN02676 89 PESNP-IWELANKLKLRtfYSDFDNLSSNI-YKQDGGLY--------------------PKKVVQKSMKVADASDE---F 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 194 TSNCSQLLSLYDSYSTKAYLMK--EGTLSKGAIEMIGDIMNenagYYKSLLESLRIASI-----------FSKSDQFSEI 260
Cdd:PLN02676 144 GENLSISLSAKKAVDISILTAQrlFGQVPKTPLEMVIDYYN----YDYEFAEPPRVTSLkntepnptfvdFGEDEYFVAD 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 261 TGGFDQLPNGLSA---SLKPGTI---RLgsKVERVVR------DGPKVKVmyrTDGPTsalhkLTADYAIITASAKA--T 326
Cdd:PLN02676 220 PRGYESLVYYLAEqflSTKSGKItdpRL--KLNKVVReisyskNGVTVKT---EDGSV-----YRAKYVIVSVSLGVlqS 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 327 RLITFQPPLSREKTHALRSVHYTSATKVVLVCNERFWEQ----------DGIRGGYSITDRPSRfiYYPshslpgGKGVL 396
Cdd:PLN02676 290 DLIKFKPPLPDWKIEAIYQFDMAVYTKIFLKFPYKFWPSgpgtefflyaHERRGYYPFWQHLEN--EYP------GSNVL 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 397 LASFTvGDDSSFFAALKPNQV---VDVVLDDLAAVHrIPKEElKRMCPKsaikhWSLDPLTIGAFTEF----TPYQFvdy 469
Cdd:PLN02676 362 FVTVT-DEESRRIEQQPDSETkaeIMEVLRKMFGPN-IPEAT-DILVPR-----WWSNRFFKGSYSNWpigvSRYEF--- 430
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 227500024 470 sKQLSQPEGRIYFAGEHTCLPHS-WIDTAIKSGIRASCNIQAAVDKEATRGH 520
Cdd:PLN02676 431 -DQIRAPVGRVYFTGEHTSEKYNgYVHGAYLAGIDTANDLLECIKKKKCRKN 481
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
60-509 |
1.44e-19 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 91.29 E-value: 1.44e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTlrNKEEGWYLELGPMRIPE--SHKLIHTYVQKLGLKLNKF- 136
Cdd:PLN02268 3 VIVIGGGIAGIAAARALHDASFKVTLLESRDRIGGRVHT--DYSFGFPVDMGASWLHGvcNENPLAPLIGRLGLPLYRTs 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 137 --------HQYDSNTWYLLNGQRYrasevmanpgilgyplrPSEKNKTVTDLFYQAITKIKPHRKTSncSQLLSLYDSYS 208
Cdd:PLN02268 81 gdnsvlydHDLESYALFDMDGNQV-----------------PQELVTKVGETFERILEETEKVRDEH--EEDMSLLQAIS 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 209 T----KAYLMKEGtlskgaiemigdIMNENAGYYKSLLESLRIA---SIFSKS-DQFSEITG-------GFDQLPNGLSA 273
Cdd:PLN02268 142 IvlerHPELRLEG------------LAHEVLQWYLCRMEGWFAAdadTISLKSwDQEELLEGghglmvrGYDPVINTLAK 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 274 SLKpgtIRLGSKVERVVRDGPKVKVMYRtDGPTsalhkLTADYAIITASA---KAtRLITFQPPLSREKTHALRSVHYTS 350
Cdd:PLN02268 210 GLD---IRLNHRVTKIVRRYNGVKVTVE-DGTT-----FVADAAIIAVPLgvlKA-NIIKFEPELPEWKEEAISDLGVGI 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 351 ATKVVLVCNERFWEQDGIRGGYSITDRPSRfiYYPSHSLPGGKGVLLasftvgddssFFAALKPNQVVDVVLDDLAAVHR 430
Cdd:PLN02268 280 ENKIALHFDSVFWPNVEFLGVVAPTSYGCS--YFLNLHKATGHPVLV----------YMPAGRLARDIEKLSDEAAANFA 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 431 IpkEELKRMCP------KSAIKHWSLDPLTIGAFTeftpYQFV----DYSKQLSQPEGRIYFAGEHTCLPHSW-IDTAIK 499
Cdd:PLN02268 348 M--SQLKKMLPdatepvQYLVSRWGSDPNSLGCYS----YDLVgkphDLYERLRAPVDNLFFAGEATSSDFPGsVHGAYS 421
|
490
....*....|
gi 227500024 500 SGIRASCNIQ 509
Cdd:PLN02268 422 TGVMAAEECR 431
|
|
| PLN02568 |
PLN02568 |
polyamine oxidase |
59-503 |
3.13e-16 |
|
polyamine oxidase
Pssm-ID: 215308 [Multi-domain] Cd Length: 539 Bit Score: 81.41 E-value: 3.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGH-----EVTILEASNHIGGRVVTlrNKEEGWYLELGPMRIpesHKLIHTYVQKLGLKL 133
Cdd:PLN02568 7 RIVIIGAGMAGLTAANKLYTSSAandmfELTVVEGGDRIGGRINT--SEFGGERIEMGATWI---HGIGGSPVYKIAQEA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 134 NKFHQydSNTWYLLNGQRYRASeVMANPGIL---------------------GYPLRPSEKNKTVTDLFYQAITKIKPHR 192
Cdd:PLN02568 82 GSLES--DEPWECMDGFPDRPK-TVAEGGFEvdpsivesistlfrglmddaqGKLIEPSEVDEVDFVKLAAKAARVCESG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 193 KTSNCSQLL-----SLYDSYSTKAYLMKEGTLSKGAIEMIGDIMNENAGY-YKSL--LESLRIASiFSKSDQFS--EIT- 261
Cdd:PLN02568 159 GGGSVGSFLrrgldAYWDSVSADEQIKGYGGWSRKLLEEAIFTMHENTQRtYTSAddLSTLDLAA-ESEYRMFPgeEITi 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 262 -GGFDQLPNGLSASLKPGTIRLGSKVERVVRDGPKVKVMYrTDGPTsalhkLTADYAIITAS---AKA---TRLITFQPP 334
Cdd:PLN02568 238 aKGYLSVIEALASVLPPGTIQLGRKVTRIEWQDEPVKLHF-ADGST-----MTADHVIVTVSlgvLKAgigEDSGLFSPP 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 335 LSREKTHALRSVHYTSATKVVLVCNERfweQDGIRGGYS-------ITDRP---SRFIYYP-----SHSL-P--GGKGVL 396
Cdd:PLN02568 312 LPDFKTDAISRLGFGVVNKLFVELSPR---PDGSPEDVAkfpflqmAFHRSdseARHDKIPwwmrrTASIcPihKNSSVL 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 397 LASFTvGDDSSFFAALKPNQVVDVVLDDLAAV--HRIPKEELKRMCP--------------KSAIKH--WSLDPLTIGAF 458
Cdd:PLN02568 389 LSWFA-GKEALELEKLSDEEIIRGVQTTLSSFlkRRVAGLGSQSHPLcnggassndgsrwkFVKVLKskWGTDPLFLGSY 467
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 227500024 459 TEFT-------------PYQFVDYSKQLSQPEGRIYFAGEHTCLPH-SWIDTAIKSGIR 503
Cdd:PLN02568 468 SYVAvgssgddldrmaePLPRISDHDQAGGPPLQLLFAGEATHRTHySTTHGAYFSGLR 526
|
|
| PLN03000 |
PLN03000 |
amine oxidase |
53-518 |
3.98e-16 |
|
amine oxidase
Pssm-ID: 178578 [Multi-domain] Cd Length: 881 Bit Score: 81.60 E-value: 3.98e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 53 TSPLSKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVT--LRNKEEGWYLELGPMRIPESH-KLIHTYVQKL 129
Cdd:PLN03000 180 AQSSKSSVVIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRVYTkkMEANRVGAAADLGGSVLTGTLgNPLGIIARQL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 130 GLKLNKFHqyDSNTWYLLNGQryrasevmanpgilgyPLRPSEKNKTVTDlFYQAITKIKPHRK-TSNCSQLLSLYDSYS 208
Cdd:PLN03000 260 GSSLYKVR--DKCPLYRVDGK----------------PVDPDVDLKVEVA-FNQLLDKASKLRQlMGDVSMDVSLGAALE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 209 TkaylMKEGTLSKGAIEMIG-------DIMNENAGyyksLLESLRIAsiFSKSDQFSEITGGFDQLPNG---LSASLKPG 278
Cdd:PLN03000 321 T----FRQVSGNDVATEEMGlfnwhlaNLEYANAG----LVSKLSLA--FWDQDDPYDMGGDHCFLPGGngrLVQALAEN 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 279 TIRLGSKVERVVRDGPK-VKVmyrtdgpTSALHKLTADYAIITASAKATR--LITFQPPLSREKTHALRSVHYTSATKVV 355
Cdd:PLN03000 391 VPILYEKTVQTIRYGSNgVKV-------IAGNQVYEGDMVLCTVPLGVLKngSIKFVPELPQRKLDCIKRLGFGLLNKVA 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 356 LVCNERFWEQDGIRGGYsITDRPSR----FIYYPSHSLPGGKgvLLASFTVGDDSSFFAALKPNQVVDVVLDDLAAVHR- 430
Cdd:PLN03000 464 MLFPYVFWSTDLDTFGH-LTEDPNYrgefFLFYSYAPVAGGP--LLIALVAGEAAHKFETMPPTDAVTRVLHILRGIYEp 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 431 ----IPkEELKRMCPKsaikhWSLDPLTIGAFTEFTPYQFVDYSKQLSQP--EGRIYFAGEHTCLPH-SWIDTAIKSGIR 503
Cdd:PLN03000 541 qginVP-DPLQTVCTR-----WGGDPFSLGSYSNVAVGASGDDYDILAESvgDGRLFFAGEATTRRYpATMHGAFVTGLR 614
|
490
....*....|....*
gi 227500024 504 ASCNIQAAVDKEATR 518
Cdd:PLN03000 615 EAANMAQSAKARGIR 629
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
57-428 |
1.80e-15 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 78.74 E-value: 1.80e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 57 SKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKEEGWYLELGPmripesHKLI----HT--YVQKLG 130
Cdd:COG3349 3 PPRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRARSFPDPDTGLPIDNGQ------HVLLgcyrNTldLLRRIG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 131 LkLNKFHQYDSNTWYLLNGQRYRASevmANPG---------ILGYP-LRPSEKNKTVtdlfyQAITKIKPHRktsncsql 200
Cdd:COG3349 77 A-ADNLVGPEPLQFPLPGGRRWTLR---APRLpaplhllraLLRAPgLSLADRLALL-----RLLTACRERR-------- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 201 LSLYDSYSTKAYLMKEGtlskgaiemigdimnENAGYYKSLLESLRIASIFSKSDQ--------------FSEITGGFDQ 266
Cdd:COG3349 140 WRELDDISVADWLRRHG---------------QSPRLIRRLWEPLLLAALNTPPEQasarlaltvlretlLAGPAASDLL 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 267 LPNG-LSASL-KP---------GTIRLGSKVERVVRDGPKVKVMYRTDGPTsalhkLTADYAIITASAK-ATRLItfqPP 334
Cdd:COG3349 205 VPRGpLSELFvDPalayleargGEVRLGTRVRALEFDGGRVTGLVLADGET-----VPADAVVLAVPPEvAARLL---PE 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 335 LSREKTHALrsvhyTSATKVVLVCNERFWEQDGIRGG----YSITDRPSRFIYYPSHSLPGGKGVLLASFTVGDDssfFA 410
Cdd:COG3349 277 LARLPELGL-----LAPLEYSPIVNVHLWLDRPVTLGpppfAGLVGSTSQWVFDRGAGDGGQGGVLSVVISAADR---LL 348
|
410
....*....|....*...
gi 227500024 411 ALKPNQVVDVVLDDLAAV 428
Cdd:COG3349 349 DLSREELAAEVWAELAAL 366
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
58-434 |
2.33e-15 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 78.35 E-value: 2.33e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAG--HEVTILEASNHIGGRVVTLRnkEEGWYLELGP----MRIPESHKLIHtyvqKLGL 131
Cdd:PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGpdADITLLEASDRLGGKIQTVR--KDGFPIELGPesflARKPSAPALVK----ELGL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 132 KlnkfHQYDSNT----WYLLNGQRYRASE--VManpGIlgyplrPSEKNKTVTDLFYQAITK--------IKPHRKTSNC 197
Cdd:PRK11883 75 E----DELVANTtgqsYIYVNGKLHPIPPgtVM---GI------PTSIAPFLFAGLVSPIGKlraaadlrPPRWKPGQDQ 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 198 S-----------QL-------------------LSLYDSYST-KAYLMKEGTLSKGAIEMIGDIMNENAGYYKSLleslr 246
Cdd:PRK11883 142 SvgaffrrrfgdEVvenliepllsgiyagdidtLSLRATFPQlAQAEDKYGSLLRGMRKALPKEKKKTKGVFGTL----- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 247 iasifsksdqfseiTGGFDQLPNGLSASLKPGTIRLGSKVERVVRDGPKVKVMYrTDGPTsalhkLTADYAIITASAKAT 326
Cdd:PRK11883 217 --------------KGGLQSLIEALEEKLPAGTIHKGTPVTKIDKSGDGYEIVL-SNGGE-----IEADAVIVAVPHPVL 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 327 RLITFQPPlsreKTHALRSVHYTSATKVVLV---CNERFWEQDGI----RGGYSITDrpsrfIYYPS----HSLPGGKGV 395
Cdd:PRK11883 277 PSLFVAPP----AFALFKTIPSTSVATVALAfpeSATNLPDGTGFlvarNSDYTITA-----CTWTSkkwpHTTPEGKVL 347
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 227500024 396 LLASF-TVGDDSSffAALKPNQVVDVVLDDLAAVHRIPKE 434
Cdd:PRK11883 348 LRLYVgRPGDEAV--VDATDEELVAFVLADLSKVMGITGD 385
|
|
| PLN02328 |
PLN02328 |
lysine-specific histone demethylase 1 homolog |
60-516 |
5.18e-15 |
|
lysine-specific histone demethylase 1 homolog
Pssm-ID: 215187 [Multi-domain] Cd Length: 808 Bit Score: 78.11 E-value: 5.18e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKEEGWYLEL---GPMRIPESHKLIHTYVQKLGLKLNKF 136
Cdd:PLN02328 241 VVVVGAGLAGLVAARQLLSMGFKVVVLEGRARPGGRVKTMKMKGDGVVAAAdlgGSVLTGINGNPLGVLARQLGLPLHKV 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 137 HqyDSNTWYLLNGQRYRAS-----EVMANPgILGY--PLRPS--EKNKTVTDLFYQAITKIKPHRKTSNCSQLLSLYDSY 207
Cdd:PLN02328 321 R--DICPLYLPDGKAVDAEidskiEASFNK-LLDRvcKLRQAmiEEVKSVDVNLGTALEAFRHVYKVAEDPQERMLLNWH 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 208 stkaylmkegtlskgaiemIGDIMNENAgyykSLLESLRIAsIFSKSDQFSE------ITGGFDQLPNGLSASLKpgtIR 281
Cdd:PLN02328 398 -------------------LANLEYANA----SLMSNLSMA-YWDQDDPYEMggdhcfIPGGNDTFVRELAKDLP---IF 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 282 LGSKVERvVRDGPKVKVMYRTDgptsalHKLTADYAIITASAKATR--LITFQPPLSREKTHALRSVHYTSATKVVLVCN 359
Cdd:PLN02328 451 YERTVES-IRYGVDGVIVYAGG------QEFHGDMVLCTVPLGVLKkgSIEFYPELPQRKKDAIQRLGYGLLNKVALLFP 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 360 ERFWEQDGIRGGYSITDRPSR---FIYYPSHSLPGGKgvLLASFTVGDDSSFFAALKPNQVVDVVLDDLAAVHRiPK--- 433
Cdd:PLN02328 524 YNFWGGEIDTFGHLTEDPSMRgefFLFYSYSSVSGGP--LLIALVAGDAAVKFETLSPVESVKRVLQILRGIFH-PKgiv 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 434 --EELKRMCPKsaikhWSLDPLTIGAFTEFTPYQFVDYSKQLSQP--EGRIYFAGEHTCLPH-SWIDTAIKSGIRASCNI 508
Cdd:PLN02328 601 vpDPVQAVCTR-----WGKDCFTYGSYSYVAVGSSGDDYDILAESvgDGRVFFAGEATNKQYpATMHGAFLSGMREAANI 675
|
....*...
gi 227500024 509 QAAVDKEA 516
Cdd:PLN02328 676 LRVARRRS 683
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
59-363 |
1.56e-14 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 75.69 E-value: 1.56e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRnkEEGWYLElgpmR----IPES-HKLIHtYVQKLGLKl 133
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASFE--FGGLPIE----RfyhhIFKSdEALLE-LLDELGLE- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 134 NKFHQYDSNTWYLLNGQRYRasevMANP-GILGYP-LRPSEKNKtvTDLFYQAITKIKPHRKtsncsqllslYDSYSTKA 211
Cdd:PRK07233 73 DKLRWRETKTGYYVDGKLYP----LGTPlELLRFPhLSLIDKFR--LGLLTLLARRIKDWRA----------LDKVPAEE 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 212 YLmkegtlskgaIEMIGdimnENAgyYKSLLESL-------------------RIASI-FSKSDQFSE----ITGGFDQL 267
Cdd:PRK07233 137 WL----------RRWSG----EGV--YEVFWEPLleskfgdyaddvsaawlwsRIKRRgNRRYSLFGEklgyLEGGFATL 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 268 PNGLSASL--KPGTIRLGSKVERVVRDGPKVKVMyRTDGptsalHKLTADYAIITASAKATRLITfqPPLSREKTHALRS 345
Cdd:PRK07233 201 IDALAEAIeaRGGEIRLGTPVTSVVIDGGGVTGV-EVDG-----EEEDFDAVISTAPPPILARLV--PDLPADVLARLRR 272
|
330 340
....*....|....*....|..
gi 227500024 346 VHYTSATKVVLVCNER----FW 363
Cdd:PRK07233 273 IDYQGVVCMVLKLRRPltdyYW 294
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
58-111 |
2.47e-14 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 74.14 E-value: 2.47e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNkeEGWYLELG 111
Cdd:COG3380 4 PDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGGRMATRRL--DGGRFDHG 55
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
57-428 |
9.27e-14 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 73.35 E-value: 9.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 57 SKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLrnKEEGWYLELGPMRIPESHkLIHTYVQKLGLKLN-K 135
Cdd:COG1233 3 MYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTF--ERPGFRFDVGPSVLTMPG-VLERLFRELGLEDYlE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 136 FHQYDSNTWYLLNGQR----YRASEVMAN----------PGILGYpLRPSEK--NKTVTDLFYQAITKIKPHRKTSNCSQ 199
Cdd:COG1233 80 LVPLDPAYRVPFPDGRaldlPRDLERTAAelerlfpgdaEAYRRF-LAELRRlyDALLEDLLYRPLLSLRDLLRPLALAR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 200 LLSLYDSySTKAYLMKEgTLSKGAIEMigdiMNENAGYY-KSLLESLRIASIFSKSDQFSEI---TGGFDQLPNGLSASL 275
Cdd:COG1233 159 LLRLLLR-SLRDLLRRY-FKDPRLRAL----LAGQALYLgLSPDRTPALYALIAYLEYAGGVwypKGGMGALADALARLA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 276 K--PGTIRLGSKVERVVRDGPKVKVMYRTDGptsalHKLTADYAIITASAKAT--RLITfQPPLSREKTHALRSVHYT-S 350
Cdd:COG1233 233 EelGGEIRTGAEVERILVEGGRATGVRLADG-----EEIRADAVVSNADPAHTylRLLG-EEALPARYRRRLERFRYSpS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 351 ATKVVLVCNERF-------------WEQ--DGIRGGySITDRPSRFIYYPSH---SL-PGGKGVLLASFTVG-DDSSFFA 410
Cdd:COG1233 307 AFKLYLGLDGPLpglahhtihlsedYEAafDDIFRG-RLPEDPSLYVSIPSLtdpSLaPEGKHTLWVLVPVPyGLEDAWD 385
|
410
....*....|....*...
gi 227500024 411 ALKPnQVVDVVLDDLAAV 428
Cdd:COG1233 386 ELKE-EYAERILARLERY 402
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
58-437 |
2.98e-13 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 71.79 E-value: 2.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 58 KRVVVVGAGMAGLVAA----KTLQDAGHEVTILEASNHIGGRVVTLrnKEEGWYLELGPMRIPESHKLIHTYVQKLGLKl 133
Cdd:TIGR00562 3 KHVVIIGGGISGLCAAyyleKEIPELPVELTLVEASDRVGGKIQTV--KEDGYLIERGPDSFLERKKSAPDLVKDLGLE- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 134 nkfHQYDSNTwyllNGQRYraseVMANPG-ILGYPLRPSEKNKtvTDLF------YQAITKIKPHRKTSNCS-------Q 199
Cdd:TIGR00562 80 ---HVLVSDA----TGQRY----VLVNRGkLMPVPTKIAPFVK--TGLFslggklRAGMDFIRPASPGKDESveefvrrR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 200 LLSLYDSYSTKAYL--MKEGTLSKGAIEMIGDIMNENAGYYKSLLESLRIASIFSKSDQFSEITGGFDQLPNGLSASLK- 276
Cdd:TIGR00562 147 FGDEVVENLIEPLLsgIYAGDPSKLSLKSTFPKFYQTEQKHGSLILGMKKTRNLPQGSGLQLTAKKQGQDFQTLATGLEt 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 277 -PGTIRLGSKVERVVRDGPKVKVMYRTDGPTSALH---KLTADYAIITASA-KATRLItfqPPLSREKTHALRSVHYTSA 351
Cdd:TIGR00562 227 lPEEIEKRLKLTKVYKGTKVTKLSHRGSNYTLELDngvTVETDSVVVTAPHkAAAGLL---SELSNSASSHLDKIHSPPV 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 352 TKVVLVCNERFWEQDGIRGGYSITdRPSRF-----IYYPS---HSLPGGKgVLLASFTVGDDSSFFAALKPNQVVDVVLD 423
Cdd:TIGR00562 304 ANVNLGFPEGSVDGELEGFGFLIS-RSSKFailgcIFTSKlfpNRAPPGK-TLLTAYIGGATDESIVDLSENEIINIVLR 381
|
410
....*....|....
gi 227500024 424 DLAAVHRIPKEELK 437
Cdd:TIGR00562 382 DLKKVLNINNEPEM 395
|
|
| PLN02529 |
PLN02529 |
lysine-specific histone demethylase 1 |
51-511 |
1.02e-12 |
|
lysine-specific histone demethylase 1
Pssm-ID: 178144 [Multi-domain] Cd Length: 738 Bit Score: 70.69 E-value: 1.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 51 LHTSPL-----SKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKEEGWY--LELGPMRIPESH-KLI 122
Cdd:PLN02529 149 SFASPIpeegtEGSVIIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGGRVYTQKMGRKGQFaaVDLGGSVITGIHaNPL 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 123 HTYVQKLGLKLNKFHQydsntwyllNGQRYRASEVMANPGIlgyplrpsekNKTVTDLFYQAITKIKPHRKT----SNCS 198
Cdd:PLN02529 229 GVLARQLSIPLHKVRD---------NCPLYKPDGALVDKEI----------DSNIEFIFNKLLDKVTELRQImggfANDI 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 199 QLLSLYDSYStKAYLMKEGTLSKGAIEM-IGDIMNENAGYYKSLleslrIASIFSKSDQFSE------ITGGFDQLPNGL 271
Cdd:PLN02529 290 SLGSVLERLR-QLYGVARSTEERQLLDWhLANLEYANAGCLSDL-----SAAYWDQDDPYEMggdhcfLAGGNWRLINAL 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 272 SASLKpgtIRLGSKVERVVRDGPKVKVMyrtdgptSALHKLTADYAIITA--SAKATRLITFQPPLSREKTHALRSVHYT 349
Cdd:PLN02529 364 CEGVP---IFYGKTVDTIKYGNDGVEVI-------AGSQVFQADMVLCTVplGVLKKRTIRFEPELPRRKLAAIDRLGFG 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 350 SATKVVLVCNERFWEQD----GIRGGYSItDRPSRFIYYPSHSLPGGKgvLLASFTVGDDSSFFAALKPNQVVDVVLDDL 425
Cdd:PLN02529 434 LLNKVAMVFPSVFWGEEldtfGCLNESSN-KRGEFFLFYGYHTVSGGP--ALVALVAGEAAQRFENTDPSTLLHRVLSVL 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 426 AAVHRiPK-----EELKRMCPKsaikhWSLDPLTIGAFTEF-TPYQFVDYSKQLSQPEGRIYFAGEHTCLPH-SWIDTAI 498
Cdd:PLN02529 511 RGIYN-PKginvpDPIQTICTR-----WGSDPLSYGSYSHVrVQSSGSDYDILAESVSGRLFFAGEATTRQYpATMHGAF 584
|
490
....*....|....
gi 227500024 499 KSGIR-ASCNIQAA 511
Cdd:PLN02529 585 LSGLReASRILHVA 598
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
62-112 |
6.04e-12 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 61.01 E-value: 6.04e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 227500024 62 VVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKeeGWYLELGP 112
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVP--GYVFDYGA 49
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
58-100 |
2.89e-10 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 63.35 E-value: 2.89e-10
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLR 100
Cdd:PLN02976 694 KKIIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGGRVYTDR 736
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
52-125 |
3.56e-10 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 62.18 E-value: 3.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 52 HTSPLSKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKEEGwyLE-----LGPM--RIpESHKLIHT 124
Cdd:COG1148 135 IKVPVNKRALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRAAQLHKTFPG--LDcpqciLEPLiaEV-EANPNITV 211
|
.
gi 227500024 125 Y 125
Cdd:COG1148 212 Y 212
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
59-94 |
2.35e-09 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 59.49 E-value: 2.35e-09
10 20 30
....*....|....*....|....*....|....*.
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:COG2072 8 DVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGG 43
|
|
| PLN02612 |
PLN02612 |
phytoene desaturase |
53-107 |
8.81e-09 |
|
phytoene desaturase
Pssm-ID: 215330 [Multi-domain] Cd Length: 567 Bit Score: 57.93 E-value: 8.81e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 227500024 53 TSPLskRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKEEGWY 107
Cdd:PLN02612 91 AKPL--KVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWY 143
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
55-114 |
1.32e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 57.21 E-value: 1.32e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 55 PLSKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKeeGWYLELGPMR 114
Cdd:PRK07208 2 TNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISRTVTYK--GNRFDIGGHR 59
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
39-97 |
3.33e-08 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 55.53 E-value: 3.33e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 227500024 39 DYEAFLLIAQNGlhtsplsKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVV 97
Cdd:COG1251 131 DADALRAALAPG-------KRVVVIGGGLIGLEAAAALRKRGLEVTVVERAPRLLPRQL 182
|
|
| PLN02487 |
PLN02487 |
zeta-carotene desaturase |
59-111 |
1.21e-07 |
|
zeta-carotene desaturase
Pssm-ID: 215268 [Multi-domain] Cd Length: 569 Bit Score: 54.42 E-value: 1.21e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKeEGWYLELG 111
Cdd:PLN02487 77 KVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSFVDK-NGNHIEMG 128
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
59-99 |
1.32e-07 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 53.40 E-value: 1.32e-07
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHI--GGRVVTL 99
Cdd:COG0654 5 DVLIVGGGPAGLALALALARAGIRVTVVERAPPPrpDGRGIAL 47
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
58-94 |
3.36e-07 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 52.44 E-value: 3.36e-07
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:COG0493 122 KKVAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGG 158
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
57-94 |
3.83e-07 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 52.43 E-value: 3.83e-07
10 20 30
....*....|....*....|....*....|....*...
gi 227500024 57 SKRVVVVGAGMAGLVAAKTLQDAgHEVTILEASNHIGG 94
Cdd:COG2907 3 RMRIAVIGSGISGLTAAWLLSRR-HDVTLFEANDRLGG 39
|
|
| crtI_fam |
TIGR02734 |
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ... |
60-112 |
4.44e-07 |
|
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Pssm-ID: 274273 [Multi-domain] Cd Length: 495 Bit Score: 52.28 E-value: 4.44e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRnkEEGWYLELGP 112
Cdd:TIGR02734 1 AVVIGAGFGGLALAIRLAAAGIPVTVVEQRDKPGGRAGVLE--DDGFRFDTGP 51
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
55-94 |
4.65e-07 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 52.10 E-value: 4.65e-07
10 20 30 40
....*....|....*....|....*....|....*....|
gi 227500024 55 PLSKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:PRK11749 138 KTGKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGG 177
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
58-94 |
5.63e-07 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 52.09 E-value: 5.63e-07
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:PRK12810 144 KKVAVVGSGPAGLAAADQLARAGHKVTVFERADRIGG 180
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
60-94 |
1.56e-06 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 50.56 E-value: 1.56e-06
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTIL--EASNHIGG 94
Cdd:COG3573 8 VIVVGAGLAGLVAAAELADAGRRVLLLdqEPEANLGG 44
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
60-94 |
2.41e-06 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 50.28 E-value: 2.41e-06
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTIL--EASNHIGG 94
Cdd:PRK12834 7 VIVVGAGLAGLVAAAELADAGKRVLLLdqENEANLGG 43
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
58-94 |
3.97e-06 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 49.49 E-value: 3.97e-06
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:PRK12771 138 KRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGG 174
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
58-94 |
4.65e-06 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 49.34 E-value: 4.65e-06
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:PRK12814 194 KKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGG 230
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
57-94 |
5.08e-06 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 48.75 E-value: 5.08e-06
10 20 30
....*....|....*....|....*....|....*...
gi 227500024 57 SKRVVVVGAGMAGLVAAKTLQDAGHEVTILEAsNHIGG 94
Cdd:COG0665 2 TADVVVIGGGIAGLSTAYHLARRGLDVTVLER-GRPGS 38
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
58-88 |
6.76e-06 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 48.08 E-value: 6.76e-06
10 20 30
....*....|....*....|....*....|.
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEA 88
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIED 31
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
60-94 |
1.15e-05 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 47.91 E-value: 1.15e-05
10 20 30
....*....|....*....|....*....|....*
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:COG1053 6 VVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGG 40
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
50-112 |
1.33e-05 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 47.70 E-value: 1.33e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 227500024 50 GLHTSPLSKRVVVVGAGMAGLVAAKTLQDA-GHEVTILEASNHIGGRVVTlrNKEEGWYLELGP 112
Cdd:PLN02576 5 EGSAAASSKDVAVVGAGVSGLAAAYALASKhGVNVLVTEARDRVGGNITS--VSEDGFIWEEGP 66
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
58-91 |
1.70e-05 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 47.05 E-value: 1.70e-05
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQD---AGHEVTILEASNH 91
Cdd:COG1252 2 KRIVIVGGGFAGLEAARRLRKklgGDAEVTLIDPNPY 38
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
59-133 |
2.11e-05 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 46.62 E-value: 2.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIG-------GRVVTlrnkeeGWYLELGPMRIP----ESHKLIHTYVQ 127
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGsgasgrnAGLIH------PGLRYLEPSELArlalEALDLWEELEE 74
|
....*.
gi 227500024 128 KLGLKL 133
Cdd:pfam01266 75 ELGIDC 80
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
57-111 |
2.18e-05 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 46.67 E-value: 2.18e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 227500024 57 SKRVVVVGAGMAGLVAAKTL--QDAGHEVTILEA-----------SNHIGGRV----VTLRnkEEGWYLELG 111
Cdd:COG1251 1 KMRIVIIGAGMAGVRAAEELrkLDPDGEITVIGAephppynrpplSKVLAGETdeedLLLR--PADFYEENG 70
|
|
| PRK07236 |
PRK07236 |
hypothetical protein; Provisional |
59-100 |
2.84e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 235980 [Multi-domain] Cd Length: 386 Bit Score: 46.45 E-value: 2.84e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHI----GGRVVTLR 100
Cdd:PRK07236 8 RAVVIGGSLGGLFAALLLRRAGWDVDVFERSPTEldgrGAGIVLQP 53
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
57-94 |
4.47e-05 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 46.01 E-value: 4.47e-05
10 20 30
....*....|....*....|....*....|....*...
gi 227500024 57 SKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:PLN02172 10 SQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGG 47
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
49-92 |
4.60e-05 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 45.39 E-value: 4.60e-05
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 227500024 49 NGLHTSPLSKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHI 92
Cdd:pfam07992 144 EALRLKLLPKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRL 187
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
58-96 |
5.87e-05 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 45.19 E-value: 5.87e-05
10 20 30
....*....|....*....|....*....|....*....
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRV 96
Cdd:COG0446 125 KRAVVIGGGPIGLELAEALRKRGLKVTLVERAPRLLGVL 163
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
60-94 |
6.13e-05 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 45.36 E-value: 6.13e-05
10 20 30
....*....|....*....|....*....|....*
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
65-98 |
6.26e-05 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 44.96 E-value: 6.26e-05
10 20 30
....*....|....*....|....*....|....
gi 227500024 65 AGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVT 98
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICG 34
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
59-92 |
7.22e-05 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 41.42 E-value: 7.22e-05
10 20 30
....*....|....*....|....*....|....
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHI 92
Cdd:pfam00070 1 RVVVVGGGYIGLELAGALARLGSKVTVVERRDRL 34
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
59-146 |
1.04e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 44.68 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIggrvvtlrnKEEGWYLELGPMRIpesHKL----IHTYVQKLGLKLN 134
Cdd:PRK06753 2 KIAIIGAGIGGLTAAALLQEQGHEVKVFEKNESV---------KEVGAGIGIGDNVI---KKLgnhdLAKGIKNAGQILS 69
|
90
....*....|..
gi 227500024 135 KFHQYDSNTWYL 146
Cdd:PRK06753 70 TMNLLDDKGTLL 81
|
|
| AlaDh_PNT_C |
smart01002 |
Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase catalyzes the ... |
59-99 |
1.88e-04 |
|
Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine.
Pssm-ID: 214966 [Multi-domain] Cd Length: 149 Bit Score: 41.72 E-value: 1.88e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTIL--------EASNHIGGRVVTL 99
Cdd:smart01002 22 KVVVIGAGVVGLGAAATAKGLGAEVTVLdvrparlrQLESLLGARFTTL 70
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
58-93 |
2.03e-04 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 43.72 E-value: 2.03e-04
10 20 30
....*....|....*....|....*....|....*.
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIG 93
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLG 36
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
60-86 |
2.54e-04 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 43.30 E-value: 2.54e-04
10 20
....*....|....*....|....*..
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTIL 86
Cdd:PRK05329 5 VLVIGGGLAGLTAALAAAEAGKRVALV 31
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
61-93 |
2.57e-04 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 43.50 E-value: 2.57e-04
10 20 30
....*....|....*....|....*....|...
gi 227500024 61 VVVGAGMAGLVAAKTLQDAGHEVTILEASNHIG 93
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLLEKNPKVG 33
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
52-88 |
4.70e-04 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 42.91 E-value: 4.70e-04
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 52 HTSPLSKRVVVVGAGMAGLVAAKTLQDAGHEVTILEA 88
Cdd:PRK01747 255 PGSPKARDAAIIGGGIAGAALALALARRGWQVTLYEA 291
|
|
| BetA |
COG2303 |
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ... |
60-95 |
5.41e-04 |
|
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 441878 [Multi-domain] Cd Length: 531 Bit Score: 42.51 E-value: 5.41e-04
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 60 VVVVGAGMAGLVAAKTL-QDAGHEVTILEAsnhiGGR 95
Cdd:COG2303 7 YVIVGAGSAGCVLANRLsEDAGLRVLLLEA----GGR 39
|
|
| TrkA |
COG0569 |
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ... |
50-87 |
5.48e-04 |
|
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440335 [Multi-domain] Cd Length: 296 Bit Score: 41.98 E-value: 5.48e-04
10 20 30
....*....|....*....|....*....|....*...
gi 227500024 50 GLHTSPLSKRVVVVGAGMAGLVAAKTLQDAGHEVTILE 87
Cdd:COG0569 88 ERGIKKLKMHVIIIGAGRVGRSLARELEEEGHDVVVID 125
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
58-97 |
6.83e-04 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 42.31 E-value: 6.83e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVV 97
Cdd:PRK12831 141 KKVAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGGVLV 180
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
58-94 |
7.15e-04 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 42.42 E-value: 7.15e-04
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:PRK12778 432 KKVAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIGG 468
|
|
| L-AlaDH |
cd05305 |
Alanine dehydrogenase NAD-binding and catalytic domains; Alanine dehydrogenase (L-AlaDH) ... |
59-99 |
8.16e-04 |
|
Alanine dehydrogenase NAD-binding and catalytic domains; Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.
Pssm-ID: 240630 [Multi-domain] Cd Length: 359 Bit Score: 41.62 E-value: 8.16e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEAS--------NHIGGRVVTL 99
Cdd:cd05305 170 KVVILGAGVVGENAARVALGLGAEVTVLDINlerlryldDIFGGRVTTL 218
|
|
| PRK13984 |
PRK13984 |
putative oxidoreductase; Provisional |
58-94 |
1.01e-03 |
|
putative oxidoreductase; Provisional
Pssm-ID: 172486 [Multi-domain] Cd Length: 604 Bit Score: 41.68 E-value: 1.01e-03
10 20 30
....*....|....*....|....*....|....*..
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:PRK13984 284 KKVAIVGSGPAGLSAAYFLATMGYEVTVYESLSKPGG 320
|
|
| FMO-like |
pfam00743 |
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ... |
58-105 |
1.50e-03 |
|
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.
Pssm-ID: 395602 [Multi-domain] Cd Length: 531 Bit Score: 41.30 E-value: 1.50e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKEEG 105
Cdd:pfam00743 2 KKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEG 49
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
60-94 |
1.54e-03 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 41.17 E-value: 1.54e-03
10 20 30
....*....|....*....|....*....|....*
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:PRK07843 10 VVVVGSGAAGMVAALTAAHRGLSTVVVEKAPHYGG 44
|
|
| Ald |
COG0686 |
Alanine dehydrogenase (includes sporulation protein SpoVN) [Amino acid transport and ... |
59-99 |
3.11e-03 |
|
Alanine dehydrogenase (includes sporulation protein SpoVN) [Amino acid transport and metabolism]; Alanine dehydrogenase (includes sporulation protein SpoVN) is part of the Pathway/BioSystem: Urea cycle
Pssm-ID: 440450 [Multi-domain] Cd Length: 372 Bit Score: 39.99 E-value: 3.11e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTIL--------EASNHIGGRVVTL 99
Cdd:COG0686 170 KVVILGGGVVGTNAARMALGLGADVTVLdinldrlrRLDDIFGGRVTTL 218
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
60-94 |
3.79e-03 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 39.68 E-value: 3.79e-03
10 20 30
....*....|....*....|....*....|....*
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASnHIGG 94
Cdd:COG1249 6 LVVIGAGPGGYVAAIRAAQLGLKVALVEKG-RLGG 39
|
|
| FAD_oxidored |
pfam12831 |
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ... |
60-94 |
4.97e-03 |
|
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.
Pssm-ID: 432816 [Multi-domain] Cd Length: 420 Bit Score: 39.51 E-value: 4.97e-03
10 20 30
....*....|....*....|....*....|....*
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:pfam12831 2 VVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGG 36
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
60-93 |
5.12e-03 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 38.84 E-value: 5.12e-03
10 20 30
....*....|....*....|....*....|....
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIG 93
Cdd:TIGR02032 3 VVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPR 36
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
60-94 |
5.54e-03 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 39.35 E-value: 5.54e-03
10 20 30
....*....|....*....|....*....|....*
gi 227500024 60 VVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGG 94
Cdd:PRK12844 9 VVVVGSGGGGMCAALAAADSGLEPLIVEKQDKVGG 43
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
59-87 |
5.85e-03 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 39.01 E-value: 5.85e-03
10 20
....*....|....*....|....*....
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILE 87
Cdd:PRK00711 2 RVVVLGSGVIGVTSAWYLAQAGHEVTVID 30
|
|
| AlaDh_PNT_C |
pfam01262 |
Alanine dehydrogenase/PNT, C-terminal domain; This family now also contains the lysine ... |
59-104 |
7.71e-03 |
|
Alanine dehydrogenase/PNT, C-terminal domain; This family now also contains the lysine 2-oxoglutarate reductases.
Pssm-ID: 426165 [Multi-domain] Cd Length: 213 Bit Score: 37.86 E-value: 7.71e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTIL--------EASNHIGGRVVTLRNKEE 104
Cdd:pfam01262 30 KVLVIGGGVAGLNAAATAKGLGAIVTILdvrparleQLESILGAKFVETLYSQA 83
|
|
| PRK08163 |
PRK08163 |
3-hydroxybenzoate 6-monooxygenase; |
59-112 |
8.97e-03 |
|
3-hydroxybenzoate 6-monooxygenase;
Pssm-ID: 181262 [Multi-domain] Cd Length: 396 Bit Score: 38.48 E-value: 8.97e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 227500024 59 RVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGgrvvtlrnkEEGWYLELGP 112
Cdd:PRK08163 6 PVLIVGGGIGGLAAALALARQGIKVKLLEQAAEIG---------EIGAGIQLGP 50
|
|
| PRK07588 |
PRK07588 |
FAD-binding domain; |
58-97 |
9.09e-03 |
|
FAD-binding domain;
Pssm-ID: 169028 [Multi-domain] Cd Length: 391 Bit Score: 38.56 E-value: 9.09e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHI--GGRVV 97
Cdd:PRK07588 1 MKVAISGAGIAGPTLAYWLRRYGHEPTLIERAPELrtGGYMV 42
|
|
| PanE |
COG1893 |
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of ... |
59-86 |
9.12e-03 |
|
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of the Pathway/BioSystem: Pantothenate/CoA biosynthesis
Pssm-ID: 441497 [Multi-domain] Cd Length: 305 Bit Score: 38.30 E-value: 9.12e-03
10 20
....*....|....*....|....*....
gi 227500024 59 RVVVVGAG-MAGLVAAKtLQDAGHEVTIL 86
Cdd:COG1893 2 KIAILGAGaIGGLLGAR-LARAGHDVTLV 29
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
58-88 |
9.93e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 38.32 E-value: 9.93e-03
10 20 30
....*....|....*....|....*....|.
gi 227500024 58 KRVVVVGAGMAGLVAAKTLQDAGHEVTILEA 88
Cdd:PRK06847 5 KKVLIVGGGIGGLSAAIALRRAGIAVDLVEI 35
|
|
| |
