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Conserved domains on  [gi|16078114|ref|NP_388931|]
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putative aromatic compound monooxygenase/hydroxylase [Bacillus subtilis subsp. subtilis str. 168]

Protein Classification

PRK08244 family protein( domain architecture ID 11483184)

PRK08244 family protein

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK08244 PRK08244
monooxygenase;
3-496 0e+00

monooxygenase;


:

Pssm-ID: 236199 [Multi-domain]  Cd Length: 493  Bit Score: 952.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    3 MKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSMLDT 82
Cdd:PRK08244   1 MKYEVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPRTLEILDMRGLLERFLEKGRKLPSGHFAGLDT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   83 RLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDGsVRTITSKFAVGADGAGS 162
Cdd:PRK08244  81 RLDFSALDTSSNYTLFLPQAETEKVLEEHARSLGVEIFRGAEVLAVRQDGDGVEVVVRGPDG-LRTLTSSYVVGADGAGS 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  163 TVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSLCTKEGGVMIVPLSPDRYRVVVISPYRTQTPKDVPVTEEELKAD 242
Cdd:PRK08244 160 IVRKQAGIAFPGTDATFTAMLGDVVLKDPPPSSVLSLCTREGGVMIVPLSGGIYRVLIIDPERPQVPKDEPVTLEELKTS 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  243 LLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSWLL 322
Cdd:PRK08244 240 LIRICGTDFGLNDPVWMSRFGNATRQAERYRSGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGWAPDWLL 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  323 DSYHDERHPAAEGLLRNTEAQTKLIDFTQAGLHLRSMMSELLAFPDVNRYVAGQISALDVRYEADRTMPPNRLNGARLPD 402
Cdd:PRK08244 320 DSYHAERHPVGTALLRNTEVQTKLFDFTRPGLALRSMLSDLLGFPEVNRYLAGQISALDVHYEPDAEMPPHPLNGKRLPD 399

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  403 MKLILSDGNSERLYSFLQNGTFVLLSLRQEADDHIEVKGLRTVTASLAEPNEKLRNVHTILIRPDGHVAWAVDASAPDCS 482
Cdd:PRK08244 400 LELTLSDGESERLYSLLHKGTFLLLSFGSEPQDWSRYPHVRVVRASLAEGRADWNDVHTALIRPDGHVAWAVDASDPNAE 479

                        490
                 ....*....|....
gi 16078114  483 EVIQKGISRWFSVT 496
Cdd:PRK08244 480 EAIAAGISRWCGVI 493
 
Name Accession Description Interval E-value
PRK08244 PRK08244
monooxygenase;
3-496 0e+00

monooxygenase;


Pssm-ID: 236199 [Multi-domain]  Cd Length: 493  Bit Score: 952.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    3 MKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSMLDT 82
Cdd:PRK08244   1 MKYEVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPRTLEILDMRGLLERFLEKGRKLPSGHFAGLDT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   83 RLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDGsVRTITSKFAVGADGAGS 162
Cdd:PRK08244  81 RLDFSALDTSSNYTLFLPQAETEKVLEEHARSLGVEIFRGAEVLAVRQDGDGVEVVVRGPDG-LRTLTSSYVVGADGAGS 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  163 TVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSLCTKEGGVMIVPLSPDRYRVVVISPYRTQTPKDVPVTEEELKAD 242
Cdd:PRK08244 160 IVRKQAGIAFPGTDATFTAMLGDVVLKDPPPSSVLSLCTREGGVMIVPLSGGIYRVLIIDPERPQVPKDEPVTLEELKTS 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  243 LLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSWLL 322
Cdd:PRK08244 240 LIRICGTDFGLNDPVWMSRFGNATRQAERYRSGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGWAPDWLL 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  323 DSYHDERHPAAEGLLRNTEAQTKLIDFTQAGLHLRSMMSELLAFPDVNRYVAGQISALDVRYEADRTMPPNRLNGARLPD 402
Cdd:PRK08244 320 DSYHAERHPVGTALLRNTEVQTKLFDFTRPGLALRSMLSDLLGFPEVNRYLAGQISALDVHYEPDAEMPPHPLNGKRLPD 399

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  403 MKLILSDGNSERLYSFLQNGTFVLLSLRQEADDHIEVKGLRTVTASLAEPNEKLRNVHTILIRPDGHVAWAVDASAPDCS 482
Cdd:PRK08244 400 LELTLSDGESERLYSLLHKGTFLLLSFGSEPQDWSRYPHVRVVRASLAEGRADWNDVHTALIRPDGHVAWAVDASDPNAE 479

                        490
                 ....*....|....
gi 16078114  483 EVIQKGISRWFSVT 496
Cdd:PRK08244 480 EAIAAGISRWCGVI 493
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 4-340 2.02e-128

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 377.05  E-value: 2.02e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114     4 KYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIP-TGHFSMLD- 81
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQAGLEDRILAEGVPHEgMGLAFYNTr 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    82 --TRLDFsglDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDR-DGSVRTITSKFAVGAD 158
Cdd:pfam01494  81 rrADLDF---LTSPPRVTVYPQTELEPILVEHAEARGAQVRFGTEVLSLEQDGDGVTAVVRDRrDGEEYTVRAKYLVGCD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   159 GAGSTVRKQAKIEFPGTDsTVTAALGDVVLLSPPPS--------GVLSLCTKEGGVMIVPLSP--DRYRVVVISPYRTQT 228
Cdd:pfam01494 158 GGRSPVRKTLGIEFEGFE-GVPFGSLDVLFDAPDLSdpverafvHYLIYAPHSRGFMVGPWRSagRERYYVQVPWDEEVE 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   229 PKDVPVTEEELKADLLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWK 308
Cdd:pfam01494 237 ERPEEFTDEELKQRLRSIVGIDLALVEILWKSIWGVASRVATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWK 316

                         330       340       350
                  ....*....|....*....|....*....|..
gi 16078114   309 LAAAIKGSAPSWLLDSYHDERHPAAEGLLRNT 340
Cdd:pfam01494 317 LAAVLRGQAGESLLDTYSAERLPVAWAVVDFA 348
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 2-371 6.19e-75

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 239.07  E-value: 6.19e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   2 MMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSMLD 81
Cdd:COG0654   1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLARGAPIRGIRVRDGS 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  82 T---RLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFkdRDGsvRTITSKFAVGAD 158
Cdd:COG0654  81 DgrvLARFDAAETGLPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGVTVTL--ADG--RTLRADLVVGAD 156

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114 159 GAGSTVRKQAKIEFPGTDSTVTAALGDVVLlspppsgvlslctkeggvmivplspdryrvvvispyrtqtpkdvpvteeE 238
Cdd:COG0654 157 GARSAVRRLLGIGFTGRDYPQRALWAGVRT-------------------------------------------------E 187

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114 239 LKADLLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAP 318
Cdd:COG0654 188 LRARLAAAGPRLGELLELSPRSAFPLRRRRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDD 267

                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*
gi 16078114 319 SWLLDSYHDERHPAAEGLLRNTEAQTKLIDFTQAGLHL--RSMMSELLAFPDVNR 371
Cdd:COG0654 268 EAALARYERERRPRAARVQRAADALGRLFHPDSPPLRLlrNAGLRLLDRLPPLKG 322
Ubi-OHases TIGR01988
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ...
 8-346 5.64e-28

Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273913 [Multi-domain]  Cd Length: 385  Bit Score: 114.99  E-value: 5.64e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114     8 VIIGGGPVGFMLASELAIAGVGTCVIE-----RLEKPVPHSKALTLHPRTLELLEMRG----ILERFVSKGSKIPT---G 75
Cdd:TIGR01988   3 VIVGGGMVGLALALALARSGLKVALIEatplpAPADPGFDNRVSALSAASIRLLEKLGvwdkIEPARAQPIRDIHVsdgG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    76 HFSMLdtRLDFSGLDTSC-----PYTLLLpqsktEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRdgsvRTIT 150
Cdd:TIGR01988  83 SFGAL--RFDADEIGLEAlgyvvENRVLQ-----QALWERLQELPNVTLLCPARVVELPRHSDHVELTLDDG----QQLR 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   151 SKFAVGADGAGSTVRKQAKIEFPGTD---STVTAalgdVVLLSPPPSGVLSLC-TKEGGVMIVPLSPDRYRVV-VISPYR 225
Cdd:TIGR01988 152 ARLLVGADGANSKVRQLAGIPTTGWDygqSAVVA----NVKHERPHQGTAWERfTPTGPLALLPLPDNRSSLVwTLPPEE 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   226 TQTPKDVPvtEEELKADLLRICGTDFG-LTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAH-IHfPAGGQGLNVGLQDAM 303
Cdd:TIGR01988 228 AERLLALS--DEEFLAELQRAFGSRLGaITLVGERHAFPLSLTHAKRYVAPRLALIGDAAHtIH-PLAGQGLNLGLRDVA 304

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 16078114   304 NLGWKLAAAIK-----GSAPswLLDSYHDERHPAAEGLLRNTEAQTKL 346
Cdd:TIGR01988 305 ALAEVLEDARRrgediGSLR--VLQRYERRRRFDNAAMLGATDGLNRL 350
 
Name Accession Description Interval E-value
PRK08244 PRK08244
monooxygenase;
3-496 0e+00

monooxygenase;


Pssm-ID: 236199 [Multi-domain]  Cd Length: 493  Bit Score: 952.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    3 MKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSMLDT 82
Cdd:PRK08244   1 MKYEVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPRTLEILDMRGLLERFLEKGRKLPSGHFAGLDT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   83 RLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDGsVRTITSKFAVGADGAGS 162
Cdd:PRK08244  81 RLDFSALDTSSNYTLFLPQAETEKVLEEHARSLGVEIFRGAEVLAVRQDGDGVEVVVRGPDG-LRTLTSSYVVGADGAGS 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  163 TVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSLCTKEGGVMIVPLSPDRYRVVVISPYRTQTPKDVPVTEEELKAD 242
Cdd:PRK08244 160 IVRKQAGIAFPGTDATFTAMLGDVVLKDPPPSSVLSLCTREGGVMIVPLSGGIYRVLIIDPERPQVPKDEPVTLEELKTS 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  243 LLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSWLL 322
Cdd:PRK08244 240 LIRICGTDFGLNDPVWMSRFGNATRQAERYRSGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGWAPDWLL 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  323 DSYHDERHPAAEGLLRNTEAQTKLIDFTQAGLHLRSMMSELLAFPDVNRYVAGQISALDVRYEADRTMPPNRLNGARLPD 402
Cdd:PRK08244 320 DSYHAERHPVGTALLRNTEVQTKLFDFTRPGLALRSMLSDLLGFPEVNRYLAGQISALDVHYEPDAEMPPHPLNGKRLPD 399

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  403 MKLILSDGNSERLYSFLQNGTFVLLSLRQEADDHIEVKGLRTVTASLAEPNEKLRNVHTILIRPDGHVAWAVDASAPDCS 482
Cdd:PRK08244 400 LELTLSDGESERLYSLLHKGTFLLLSFGSEPQDWSRYPHVRVVRASLAEGRADWNDVHTALIRPDGHVAWAVDASDPNAE 479

                        490
                 ....*....|....
gi 16078114  483 EVIQKGISRWFSVT 496
Cdd:PRK08244 480 EAIAAGISRWCGVI 493
PRK06834 PRK06834
hypothetical protein; Provisional
 2-493 1.11e-138

hypothetical protein; Provisional


Pssm-ID: 235870 [Multi-domain]  Cd Length: 488  Bit Score: 408.64  E-value: 1.11e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    2 MMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKP-VPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSMl 80
Cdd:PRK06834   1 MTEHAVVIAGGGPTGLMLAGELALAGVDVAIVERRPNQeLVGSRAGGLHARTLEVLDQRGIADRFLAQGQVAQVTGFAA- 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   81 dTRLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRdgsvRTITSKFAVGADGA 160
Cdd:PRK06834  80 -TRLDISDFPTRHNYGLALWQNHIERILAEWVGELGVPIYRGREVTGFAQDDTGVDVELSDG----RTLRAQYLVGCDGG 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  161 GSTVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSlctKEGGVMIVPLSPDRYRVVVISPYRTQTPKDVPvTEEELK 240
Cdd:PRK06834 155 RSLVRKAAGIDFPGWDPTTSYLIAEVEMTEEPEWGVHR---DALGIHAFGRLEDEGPVRVMVTEKQVGATGEP-TLDDLR 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  241 ADLLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSW 320
Cdd:PRK06834 231 EALIAVYGTDYGIHSPTWISRFTDMARQAASYRDGRVLLAGDAAHVHSPVGGQGLNTGVQDAVNLGWKLAQVVKGTSPES 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  321 LLDSYHDERHPAAEGLLRNTEAQTKLI---DFTQAglhLRSMMSELLAFPDVNRYVAGQISALDVRYEADrtmPPNRLNG 397
Cdd:PRK06834 311 LLDTYHAERHPVAARVLRNTMAQVALLrpdDRTEA---LRDIVAELLGMDEPRKRIAAMMSGLDIHYDLG---EGHPLLG 384

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  398 ARLPDMKLILSDGnSERLYSFLQNGTFVLLSLrqEADDHIEVKG----LRTVTASLAEPNE-----KLRNVHTILIRPDG 468
Cdd:PRK06834 385 RRMPDLDLVTADG-PRRVFTLLHNARPVLLNL--GAPGAFDIAPwsdrVRLVDAKYAGPWElpvlgAVAAPAAVLIRPDG 461

                        490       500
                 ....*....|....*....|....*
gi 16078114  469 HVAWAVDASAPDCSEviqkGISRWF 493
Cdd:PRK06834 462 YVAWVGEGTDDGLAD----ALTTWF 482
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 4-340 2.02e-128

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 377.05  E-value: 2.02e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114     4 KYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIP-TGHFSMLD- 81
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQAGLEDRILAEGVPHEgMGLAFYNTr 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    82 --TRLDFsglDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDR-DGSVRTITSKFAVGAD 158
Cdd:pfam01494  81 rrADLDF---LTSPPRVTVYPQTELEPILVEHAEARGAQVRFGTEVLSLEQDGDGVTAVVRDRrDGEEYTVRAKYLVGCD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   159 GAGSTVRKQAKIEFPGTDsTVTAALGDVVLLSPPPS--------GVLSLCTKEGGVMIVPLSP--DRYRVVVISPYRTQT 228
Cdd:pfam01494 158 GGRSPVRKTLGIEFEGFE-GVPFGSLDVLFDAPDLSdpverafvHYLIYAPHSRGFMVGPWRSagRERYYVQVPWDEEVE 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   229 PKDVPVTEEELKADLLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWK 308
Cdd:pfam01494 237 ERPEEFTDEELKQRLRSIVGIDLALVEILWKSIWGVASRVATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWK 316

                         330       340       350
                  ....*....|....*....|....*....|..
gi 16078114   309 LAAAIKGSAPSWLLDSYHDERHPAAEGLLRNT 340
Cdd:pfam01494 317 LAAVLRGQAGESLLDTYSAERLPVAWAVVDFA 348
PRK06184 PRK06184
hypothetical protein; Provisional
 6-480 5.85e-81

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 260.30  E-value: 5.85e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    6 EAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSMLDTRLD 85
Cdd:PRK06184   5 DVLIVGAGPTGLTLAIELARRGVSFRLIEKAPEPFPGSRGKGIQPRTQEVFDDLGVLDRVVAAGGLYPPMRIYRDDGSVA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   86 FSGL--------DTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDGsVRTITSKFAVGA 157
Cdd:PRK06184  85 ESDMfahleptpDEPYPLPLMVPQWRTERILRERLAELGHRVEFGCELVGFEQDADGVTARVAGPAG-EETVRARYLVGA 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  158 DGAGSTVRKQAKIEFPG-TDSTVTAALGDVVL--LS-------PPPSGvlslctkeGGVMIVPLSP-DRYRVVVISPyrt 226
Cdd:PRK06184 164 DGGRSFVRKALGIGFPGeTLGIDRMLVADVSLtgLDrdawhqwPDGDM--------GMIALCPLPGtDLFQIQAPLP--- 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  227 qtPKDVPVTEEELKADLL--RICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMN 304
Cdd:PRK06184 233 --PGGEPDLSADGLTALLaeRTGRTDIRLHSVTWASAFRMNARLADRYRVGRVFLAGDAAHVHPPAGGQGLNTSVQDAYN 310

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  305 LGWKLAAAIKGsAPSWLLDSYHDERHPAAEGLLRNTeaqTKLIDFTQAGlhlrsmmsellafpDVNRYVAGQisALDVRY 384
Cdd:PRK06184 311 LGWKLAAVLAG-APEALLDTYEEERRPVAAAVLGLS---TELLDAIKRG--------------DMRRGRDVQ--QLDLGY 370

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  385 EA-----DRTMPPNRLN-GARLPDMKLILSDGNSERLYSFLQNGTFVLLSLRQEADDHIEVKGLRTVTASLAEPNEKLRN 458
Cdd:PRK06184 371 RGsslavDGPERTGGLRaGDRAPDAPLLGAAGQPTRLFDLFRGPHWTLLAFGAGAAAILARRGLRIHRVGDAAEGGDLVD 450

                        490       500       510
                 ....*....|....*....|....*....|....*
gi 16078114  459 VHT-------------ILIRPDGHVAWAVDASAPD 480
Cdd:PRK06184 451 DAGhfrdaygltggtlVLVRPDGYVGLIAAGDDAA 485
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 2-371 6.19e-75

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 239.07  E-value: 6.19e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   2 MMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSMLD 81
Cdd:COG0654   1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLARGAPIRGIRVRDGS 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  82 T---RLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFkdRDGsvRTITSKFAVGAD 158
Cdd:COG0654  81 DgrvLARFDAAETGLPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGVTVTL--ADG--RTLRADLVVGAD 156

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114 159 GAGSTVRKQAKIEFPGTDSTVTAALGDVVLlspppsgvlslctkeggvmivplspdryrvvvispyrtqtpkdvpvteeE 238
Cdd:COG0654 157 GARSAVRRLLGIGFTGRDYPQRALWAGVRT-------------------------------------------------E 187

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114 239 LKADLLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAP 318
Cdd:COG0654 188 LRARLAAAGPRLGELLELSPRSAFPLRRRRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDD 267

                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*
gi 16078114 319 SWLLDSYHDERHPAAEGLLRNTEAQTKLIDFTQAGLHL--RSMMSELLAFPDVNR 371
Cdd:COG0654 268 EAALARYERERRPRAARVQRAADALGRLFHPDSPPLRLlrNAGLRLLDRLPPLKG 322
PRK06126 PRK06126
hypothetical protein; Provisional
 1-485 1.88e-59

hypothetical protein; Provisional


Pssm-ID: 235704 [Multi-domain]  Cd Length: 545  Bit Score: 204.84  E-value: 1.88e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    1 MMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKG--SKIP----- 73
Cdd:PRK06126   4 NTSETPVLIVGGGPVGLALALDLGRRGVDSILVERKDGTAFNPKANTTSARSMEHFRRLGIADEVRSAGlpVDYPtdiay 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   74 ----TGHF-------SMLDTRLDFSGLDTSCP---YTLLLPQSKTEKLLEDHARSLGT-EVFRGAEALAVTQNGEAVQTI 138
Cdd:PRK06126  84 ftrlTGYElarfrlpSAREAITPVGGPDGSWPspeLPHRIPQKYLEPILLEHAAAQPGvTLRYGHRLTDFEQDADGVTAT 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  139 FKDRD-GSVRTITSKFAVGADGAGSTVRKQAKIEFPGTdSTVTAALGdVVLLSPppsGVLSLCTKEGGVMIVPLSPDRYR 217
Cdd:PRK06126 164 VEDLDgGESLTIRADYLVGCDGARSAVRRSLGISYEGT-SGLQRDLS-IYIRAP---GLAALVGHDPAWMYWLFNPDRRG 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  218 VVV---------ISPYRTQTPkDVPVTEEELKADLLRICGTDFGL----TDPsWMSRfgnaARQAKRYRDGRIFLAGDAA 284
Cdd:PRK06126 239 VLVaidgrdewlFHQLRGGED-EFTIDDVDARAFVRRGVGEDIDYevlsVVP-WTGR----RLVADSYRRGRVFLAGDAA 312

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  285 HIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSWLLDSYHDERHPAAeglLRNTEAQTK-------------LIDFTQ 351
Cdd:PRK06126 313 HLFTPTGGYGMNTGIGDAVNLAWKLAAVLNGWAGPALLDSYEAERRPIA---ARNTDYARRnadalgsfpvppeIEDDGP 389

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  352 AGLHLRSMMSELLAfpDVNR---YVAGqiSALDVRYE------ADRTMPP---------NRLNGARLPdmKLILSDGNSe 413
Cdd:PRK06126 390 AGDAARRKVGDALS--EHARqefNSPG--ITLGYRYDgspiivPDGTPPPpddpgvyvpSACPGGRAP--HAWLSDGRS- 462

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  414 rLYSFLQNGtFVLLSLRQEADD-----------HIEVKGLRTVTASLAEpnekLRNVHTILIRPDGHVAWAVDASAPDCS 482
Cdd:PRK06126 463 -LYDLFGPG-FTLLRFGDAAVDvapleaaaaalGVPLAVVDLPGPEAAA----LYEADLVLVRPDQHVAWRGDAAPDDAA 536


                 ...
gi 16078114  483 EVI 485
Cdd:PRK06126 537 ALL 539
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
2-493 1.16e-50

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 180.10  E-value: 1.16e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    2 MMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGskIPTGHFSMLD 81
Cdd:PRK06183   8 AHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWPTLYDLPRAVGIDDEALRVLQAIGLADEVLPHT--TPNHGMRFLD 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   82 TR----LDFSGLDTS---CPYTLLLPQSKTEKLLEDHARSL-GTEVFRGAEALAVTQNGEAVQTIFKDRDGSVRTITSKF 153
Cdd:PRK06183  86 AKgrclAEIARPSTGefgWPRRNAFHQPLLEAVLRAGLARFpHVRVRFGHEVTALTQDDDGVTVTLTDADGQRETVRARY 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  154 AVGADGAGSTVRKQAKIEFPGTDS-----TVTAALGDVVLLSPppsGVLSLCTKEGGVMIVPLSPDRYRV-VVISPyrTQ 227
Cdd:PRK06183 166 VVGCDGANSFVRRTLGVPFEDLTFperwlVVDVLIANDPLGGP---HTYQYCDPARPYTSVRLPHGRRRWeFMLLP--GE 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  228 TPKDVpVTEEELkADLLRicgtDFGLTDpswmsrfGNA-----------ARQAKRYRDGRIFLAGDAAHIHFPAGGQGLN 296
Cdd:PRK06183 241 TEEQL-ASPENV-WRLLA----PWGPTP-------DDAelirhavytfhARVADRWRSGRVLLAGDAAHLMPPFAGQGMN 307

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  297 VGLQDAMNLGWKLAAAIKGSAPSWLLDSYHDERHPAAEgllrnteaqtKLIDF-TQAGlhlrSMMSEllafpdVNRYVAG 375
Cdd:PRK06183 308 SGIRDAANLAWKLAAVLRGRAGDALLDTYEQERRPHAR----------AMIDLaVRLG----RVICP------TDRLAAA 367

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  376 qisaldvryEADRTMPPnrlnGARLPDMKLILSDGNSERLYSFLQNGtFVLLSLRQEADDHIEVKGLRTVTAslaepnek 455
Cdd:PRK06183 368 ---------LRDAVLPV----GTLFPQPRVELGGGDRGLLDDVLGPG-FAVLGWGCDPLAGLSDEQRARWRA-------- 425

                        490       500       510
                 ....*....|....*....|....*....|....*...
gi 16078114  456 lRNVHTILIRPDGHVAWAVDASAPDCSEVIQkgisRWF 493
Cdd:PRK06183 426 -LGARFVQVVPAVQAHTAQDDHDSDVDGALR----AWL 458
PRK07190 PRK07190
FAD-binding protein;
8-474 2.07e-45

FAD-binding protein;


Pssm-ID: 235955 [Multi-domain]  Cd Length: 487  Bit Score: 165.76  E-value: 2.07e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    8 VIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPT------GHFSMLD 81
Cdd:PRK07190   9 VIIGAGPVGLMCAYLGQLCGLNTVIVDKSDGPLEVGRADALNARTLQLLELVDLFDELYPLGKPCNTssvwanGKFISRQ 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   82 TRL--DFSGldtsC--PYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKdrdgSVRTITSKFAVGA 157
Cdd:PRK07190  89 SSWweELEG----ClhKHFLMLGQSYVEKLLDDKLKEAGAAVKRNTSVVNIELNQAGCLTTLS----NGERIQSRYVIGA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  158 DGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLS--PPPSGVLSLCTKEGGVMIVPLSPDRYRVVVispyRTQTpKDVpvT 235
Cdd:PRK07190 161 DGSRSFVRNHFNVPFEIIRPQIIWAVIDGVIDTdfPKVPEIIVFQAETSDVAWIPREGEIDRFYV----RMDT-KDF--T 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  236 EEELKADLLR-ICGTDFGLTDPSWMSRFGNAARQAKRYR-DGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAI 313
Cdd:PRK07190 234 LEQAIAKINHaMQPHRLGFKEIVWFSQFSVKESVAEHFFiQDRIFLAGDACHIHSVNGGQGLNTGLADAFNLIWKLNMVI 313

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  314 KGSAPSWLLDSYHDERHPAAEGLLRNTEAQTKLIDFTQAGLHLRsmmsellafpDVNRYV---AGQISALDVRYEADrtm 390
Cdd:PRK07190 314 HHGASPELLQSYEAERKPVAQGVIETSGELVRSTKYSANGTHAQ----------DYVKIVekrAGYITGMGIRYGEE--- 380

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  391 ppnRLNGARLPDMKLilsDGNSE--RLYSFLQNGTFVLL-----SLRQEADDHIEVK--GLRTVTASLAEPNEKLRNvHT 461
Cdd:PRK07190 381 ---GLCGSRLFDFEI---FQGSEktRLYSLLDYRKFTLFifgdcEVELNVPEFVKVIhiYPQQEQANFWTRNSPYAG-QA 453

                        490
                 ....*....|...
gi 16078114  462 ILIRPDGHVAWAV 474
Cdd:PRK07190 454 ILVRPDSYIEWSV 466
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 8-487 2.46e-37

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 144.24  E-value: 2.46e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    8 VIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTG----------HF 77
Cdd:PRK08132  27 VVVGAGPVGLALAIDLAQQGVPVVLLDDDDTLSTGSRAICFAKRSLEIFDRLGCGERMVDKGVSWNVGkvflrdeevyRF 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   78 SMLdtrldfSGLDTSCPYTLLLPQSKTEKLLEDHARSL-GTEVFRGAEALAVTQNGEAVQTIFKDRDGSVrTITSKFAVG 156
Cdd:PRK08132 107 DLL------PEPGHRRPAFINLQQYYVEGYLVERAQALpNIDLRWKNKVTGLEQHDDGVTLTVETPDGPY-TLEADWVIA 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  157 ADGAGSTVRKQAKIEFPGT---DSTVTAalgDVVLLSP----------PPSgvlslctKEGGVMIVPLSPDR-YRVvvis 222
Cdd:PRK08132 180 CDGARSPLREMLGLEFEGRtfeDRFLIA---DVKMKADfpterwfwfdPPF-------HPGQSVLLHRQPDNvWRI---- 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  223 pyRTQTPKDVPVTEEELKADLL-RI-----CGTDFgltDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLN 296
Cdd:PRK08132 246 --DFQLGWDADPEAEKKPENVIpRVrallgEDVPF---ELEWVSVYTFQCRRMDRFRHGRVLFAGDAAHQVSPFGARGAN 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  297 VGLQDAMNLGWKLAAAIKGSAPSWLLDSYHDERHPAAEGLLRNTEAQTKLID--------FTQAGLHL-------RSMM- 360
Cdd:PRK08132 321 SGIQDADNLAWKLALVLRGRAPDSLLDSYASEREFAADENIRNSTRSTDFITpkspvsrlFRDAVLRLardhpfaRRLVn 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  361 SELLAFPDVnrYVAGQISALDVRYEAdRTMPPnrlnGARLPDMKLiLSDGNSERLYSFLQNGtFVLL----------SLR 430
Cdd:PRK08132 401 SGRLSVPAV--YADSPLNTPDGDAFA-GGPVP----GAPAPDAPV-RADGEPGWLLDLLGGG-FTLLlfgddaaaaaLLQ 471

                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16078114  431 QEADDHIEVKGLRTVTASLAEPNEK-LRNVH-------------TILIRPDGHVA--WAvDASAPDCSEVIQK 487
Cdd:PRK08132 472 ALAAAALPVRVVAVVPAGAAQAAAGvLEDADglaaerydarpgtVYLIRPDQHVAarWR-TPDAAAVRAALAR 543
Ubi-OHases TIGR01988
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ...
 8-346 5.64e-28

Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273913 [Multi-domain]  Cd Length: 385  Bit Score: 114.99  E-value: 5.64e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114     8 VIIGGGPVGFMLASELAIAGVGTCVIE-----RLEKPVPHSKALTLHPRTLELLEMRG----ILERFVSKGSKIPT---G 75
Cdd:TIGR01988   3 VIVGGGMVGLALALALARSGLKVALIEatplpAPADPGFDNRVSALSAASIRLLEKLGvwdkIEPARAQPIRDIHVsdgG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    76 HFSMLdtRLDFSGLDTSC-----PYTLLLpqsktEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRdgsvRTIT 150
Cdd:TIGR01988  83 SFGAL--RFDADEIGLEAlgyvvENRVLQ-----QALWERLQELPNVTLLCPARVVELPRHSDHVELTLDDG----QQLR 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   151 SKFAVGADGAGSTVRKQAKIEFPGTD---STVTAalgdVVLLSPPPSGVLSLC-TKEGGVMIVPLSPDRYRVV-VISPYR 225
Cdd:TIGR01988 152 ARLLVGADGANSKVRQLAGIPTTGWDygqSAVVA----NVKHERPHQGTAWERfTPTGPLALLPLPDNRSSLVwTLPPEE 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   226 TQTPKDVPvtEEELKADLLRICGTDFG-LTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAH-IHfPAGGQGLNVGLQDAM 303
Cdd:TIGR01988 228 AERLLALS--DEEFLAELQRAFGSRLGaITLVGERHAFPLSLTHAKRYVAPRLALIGDAAHtIH-PLAGQGLNLGLRDVA 304

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 16078114   304 NLGWKLAAAIK-----GSAPswLLDSYHDERHPAAEGLLRNTEAQTKL 346
Cdd:TIGR01988 305 ALAEVLEDARRrgediGSLR--VLQRYERRRRFDNAAMLGATDGLNRL 350
PRK06185 PRK06185
FAD-dependent oxidoreductase;
1-357 1.56e-27

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 114.19  E-value: 1.56e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    1 MMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERlekpvpHSKAL------TLHPRTLELLEMRGILERFVS-KGSKIP 73
Cdd:PRK06185   3 EVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEK------HADFLrdfrgdTVHPSTLELMDELGLLERFLElPHQKVR 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   74 TGHFSMLDTRL---DFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGT-EVFRGAEALAVTQNGEAVQTI-FKDRDGSVrT 148
Cdd:PRK06185  77 TLRFEIGGRTVtlaDFSRLPTPYPYIAMMPQWDFLDFLAEEASAYPNfTLRMGAEVTGLIEEGGRVTGVrARTPDGPG-E 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  149 ITSKFAVGADGAGSTVRKQAKIEFPGTDSTVtaalgDVVLL------SPPPSGVLSLCTKEGGVMIvplspDRYRVV--- 219
Cdd:PRK06185 156 IRADLVVGADGRHSRVRALAGLEVREFGAPM-----DVLWFrlprepDDPESLMGRFGPGQGLIMI-----DRGDYWqcg 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  220 -VIspyrtqtPKDvpvTEEELKADLL-----RICGTDFGLTDP-----SW---------MSRfgnaarqAKR-YRDGRIF 278
Cdd:PRK06185 226 yVI-------PKG---GYAALRAAGLeafreRVAELAPELADRvaelkSWddvklldvrVDR-------LRRwHRPGLLC 288

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16078114  279 LaGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSwlldsyhdERHPAAegLLRNTEAQTKLIDFTQAGLHLR 357
Cdd:PRK06185 289 I-GDAAHAMSPVGGVGINLAIQDAVAAANILAEPLRRGRVS--------DRDLAA--VQRRREFPTRVTQALQRRIQRR 356
PRK08294 PRK08294
phenol 2-monooxygenase; Provisional
 8-349 1.06e-26

phenol 2-monooxygenase; Provisional


Pssm-ID: 236223 [Multi-domain]  Cd Length: 634  Bit Score: 113.93  E-value: 1.06e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    8 VIIGGGPVGFMLASELA-IAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHF--------- 77
Cdd:PRK08294  36 LIVGCGPAGLTLAAQLSaFPDITTRIVERKPGRLELGQADGIACRTMEMFQAFGFAERILKEAYWINETAFwkpdpadps 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   78 ------SMLDTRLDFSGLdtscPYtLLLPQSKTEKLLEDHARSLGTEV-------FRGaeaLAVTQNGE-AVQTIFKD-- 141
Cdd:PRK08294 116 tivrtgRVQDTEDGLSEF----PH-VIVNQARVHDYFLDVMRNSPTRLepdygreFVD---LEVDEEGEyPVTVTLRRtd 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  142 --RDGSVRTITSKFAVGADGAGSTVRKQ--------------------AKIEFPG--TDSTVTAALGDVVLLSPppsgvl 197
Cdd:PRK08294 188 geHEGEEETVRAKYVVGCDGARSRVRKAigrelrgdsanhawgvmdvlAVTDFPDirLKCAIQSASEGSILLIP------ 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  198 slctKEGGVMI---VPLS--PDRYRVVVispyrtqtpKDVPVteEELKADLLRICGT-DFGLTDPSWMS----------R 261
Cdd:PRK08294 262 ----REGGYLVrlyVDLGevPPDERVAV---------RNTTV--EEVIAKAQRILHPyTLDVKEVAWWSvyevgqrltdR 326

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  262 FGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSWLLDSYHDERHPAAEGllrnte 341
Cdd:PRK08294 327 FDDVPAEEAGTRLPRVFIAGDACHTHSAKAGQGMNVSMQDGFNLGWKLAAVLSGRSPPELLHTYSAERQAIAQE------ 400


                 ....*...
gi 16078114  342 aqtkLIDF 349
Cdd:PRK08294 401 ----LIDF 404
PRK07364 PRK07364
FAD-dependent hydroxylase;
5-312 8.18e-24

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 103.56  E-value: 8.18e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    5 YEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSK--ALTLHPRTLELLEMRGILERFVSKgskipTGHFSMLdt 82
Cdd:PRK07364  19 YDVAIVGGGIVGLTLAAALKDSGLRIALIEAQPAEAAAAKgqAYALSLLSARIFEGIGVWEKILPQ-----IGKFRQI-- 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   83 RLDfsglDTSCPYTL-LLPQS-KTEKL--LEDHARSLGT--EVFRG---------AEALAVTQNGEAVQTIFKdRDGSVR 147
Cdd:PRK07364  92 RLS----DADYPGVVkFQPTDlGTEALgyVGEHQVLLEAlqEFLQScpnitwlcpAEVVSVEYQQDAATVTLE-IEGKQQ 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  148 TITSKFAVGADGAGSTVRKQAKIEFPGTD---STVTAalgdVVLLSPPPSGVLSLCTKEGGVM-IVPLSPDRYRVVVISP 223
Cdd:PRK07364 167 TLQSKLVVAADGARSPIRQAAGIKTKGWKywqSCVTA----TVKHEAPHNDIAYERFWPSGPFaILPLPGNRCQIVWTAP 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  224 Y-RTQTPKDVPvtEEELKADLLRICGTDFG----LTDPSWmsrFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVG 298
Cdd:PRK07364 243 HaQAKALLALP--EAEFLAELQQRYGDQLGklelLGDRFL---FPVQLMQSDRYVQHRLALVGDAAHCCHPVGGQGLNLG 317

                        330
                 ....*....|....
gi 16078114  299 LQDAMNLGWKLAAA 312
Cdd:PRK07364 318 IRDAAALAQVLQTA 331
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
1-365 4.38e-17

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 83.03  E-value: 4.38e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    1 MMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERlekPVP----HSKALtLHPrTLELLEMRGILERFVSK-------- 68
Cdd:PRK07494   4 EKEHTDIAVIGGGPAGLAAAIALARAGASVALVAP---EPPyadlRTTAL-LGP-SIRFLERLGLWARLAPHaaplqsmr 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   69 ----GSKI---PTGHFSMLDTRLDFSGLDtscpytllLPQSKTEKLLEDHARSLGTEVFRGAEALAV-TQNGEAVQTIfk 140
Cdd:PRK07494  79 ivdaTGRLiraPEVRFRAAEIGEDAFGYN--------IPNWLLNRALEARVAELPNITRFGDEAESVrPREDEVTVTL-- 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  141 dRDGsvRTITSKFAVGADGAGSTVRKQAKIefpgtdSTVTAALGD--VVL--LSPPPSGVLS--LCTKEGGVMIVPLSPD 214
Cdd:PRK07494 149 -ADG--TTLSARLVVGADGRNSPVREAAGI------GVRTWSYPQkaLVLnfTHSRPHQNVSteFHTEGGPFTQVPLPGR 219

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  215 RYRVV-VISPYRTQTPKDVPVTEEELKADlLRICGTdFG-LTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGG 292
Cdd:PRK07494 220 RSSLVwVVRPAEAERLLALSDAALSAAIE-ERMQSM-LGkLTLEPGRQAWPLSGQVAHRFAAGRTALVGEAAHVFPPIGA 297

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16078114  293 QGLNVGLQDAMNLGWKLAAAIKGSAPSWLLDSYHDERHPaaegllrNTEAQTKLIDFTQaglhlRSMMSELLA 365
Cdd:PRK07494 298 QGLNLGLRDVATLVEIVEDRPEDPGSAAVLAAYDRARRP-------DILSRTASVDLLN-----RSLLSDFLP 358
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
12-328 2.63e-16

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 79.24  E-value: 2.63e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  12 GGPVGFMLASELAIAGVGTCVIERleKPVPHSKALT--LHPRTLELLEMRGILERFVSKGSKIptGHFSMLDTRLDFsgl 89
Cdd:COG0644   1 AGPAGSAAARRLARAGLSVLLLEK--GSFPGDKICGggLLPRALEELEPLGLDEPLERPVRGA--RFYSPGGKSVEL--- 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  90 DTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRdgsvRTITSKFAVGADGAGSTVRKQAK 169
Cdd:COG0644  74 PPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVVVRTGDG----EEIRADYVVDADGARSLLARKLG 149

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114 170 IEFP-GTDSTVTAALGDVVLLSPPPSG-------VLSLCTKEGGVMIVPLSPDRYRVvvispyrtqtpkdvpvteeelka 241
Cdd:COG0644 150 LKRRsDEPQDYALAIKEHWELPPLEGVdpgavefFFGEGAPGGYGWVFPLGDGRVSV----------------------- 206

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114 242 dllricGTDFGltdpswmsrfgnaaRQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSW- 320
Cdd:COG0644 207 ------GIPLG--------------GPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAIAEALEGGDFSAe 266


                ....*...
gi 16078114 321 LLDSYHDE 328
Cdd:COG0644 267 ALAEYERR 274
PRK06847 PRK06847
hypothetical protein; Provisional
 1-331 1.93e-14

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 74.91  E-value: 1.93e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    1 MMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSkiPTGHFSM- 79
Cdd:PRK06847   1 MAAVKKVLIVGGGIGGLSAAIALRRAGIAVDLVEIDPEWRVYGAGITLQGNALRALRELGVLDECLEAGF--GFDGVDLf 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   80 ------LDTRLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDrdGSvrTITSKF 153
Cdd:PRK06847  79 dpdgtlLAELPTPRLAGDDLPGGGGIMRPALARILADAARAAGADVRLGTTVTAIEQDDDGVTVTFSD--GT--TGRYDL 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  154 AVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVllsPPPSGVLSLCTKEGG---VMIVPLSPDRYRVVVISPYRTQtPK 230
Cdd:PRK06847 155 VVGADGLYSKVRSLVFPDEPEPEYTGQGVWRAVL---PRPAEVDRSLMYLGPttkAGVVPLSEDLMYLFVTEPRPDN-PR 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  231 DVPVTEEELKADLLRICGTDFG------LTDPSWMS--RFGNAARQAKRYRdGRIFLAGDAAHIHFPAGGQGLNVGLQDA 302
Cdd:PRK06847 231 IEPDTLAALLRELLAPFGGPVLqelreqITDDAQVVyrPLETLLVPAPWHR-GRVVLIGDAAHATTPHLAQGAGMAIEDA 309

                        330       340
                 ....*....|....*....|....*....
gi 16078114  303 MNLGWKLAaaiKGSAPSWLLDSYHDERHP 331
Cdd:PRK06847 310 IVLAEELA---RHDSLEAALQAYYARRWE 335
PRK07045 PRK07045
putative monooxygenase; Reviewed
 6-337 5.46e-13

putative monooxygenase; Reviewed


Pssm-ID: 136171 [Multi-domain]  Cd Length: 388  Bit Score: 70.32  E-value: 5.46e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    6 EAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTG----HFSMLD 81
Cdd:PRK07045   7 DVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFAAGGLRRDAmrlyHDKELI 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   82 TRLDFSGLDtSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEAL-AVTQNGEAVQTIFKDRDGsvRTITSKFAVGADGA 160
Cdd:PRK07045  87 ASLDYRSAS-ALGYFILIPCEQLRRLLLAKLDGLPNVRLRFETSIeRIERDADGTVTSVTLSDG--ERVAPTVLVGADGA 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  161 GSTVRKQA------KIEFPGTDSTVTAALGDVVllspPPSGVLSLCTKEGGVMIVPLSPDRYRVVVISPYRTQTPKDVPV 234
Cdd:PRK07045 164 RSMIRDDVlrmpaeRVPYATPMAFGTIALTDSV----RECNRLYVDSNQGLAYFYPIGDQATRLVVSFPADEMQGYLADT 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  235 TEEELKADLLRICGTDfgltDPSWMSRFGNAAR---------QAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNL 305
Cdd:PRK07045 240 TRTKLLARLNEFVGDE----SADAMAAIGAGTAfpliplgrmNLDRYHKRNVVLLGDAAHSIHPITGQGMNLAIEDAGEL 315

                        330       340       350
                 ....*....|....*....|....*....|...
gi 16078114  306 GWKLAAAIKGS-APSWLLDSYHDERHPAAEGLL 337
Cdd:PRK07045 316 GACLDLHLSGQiALADALERFERIRRPVNEAVI 348
PRK08850 PRK08850
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
 1-311 1.01e-12

2-octaprenyl-6-methoxyphenol hydroxylase; Validated


Pssm-ID: 236341 [Multi-domain]  Cd Length: 405  Bit Score: 69.80  E-value: 1.01e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    1 MMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIE-RL------EKPVPHSKALTLHPRTL--ELLEMRGILERFVSkgsk 71
Cdd:PRK08850   1 MMQSVDVAIIGGGMVGLALAAALKESDLRIAVIEgQLpeealnELPDVRVSALSRSSEHIlrNLGAWQGIEARRAA---- 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   72 iPTGHFSMLD----TRLDFSGLDTSCPYTLLLPQSKTEKL-LEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDrDGsv 146
Cdd:PRK08850  77 -PYIAMEVWEqdsfARIEFDAESMAQPDLGHIVENRVIQLaLLEQVQKQDNVTLLMPARCQSIAVGESEAWLTLD-NG-- 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  147 RTITSKFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSLCTKEGGVMIVPLSPDRYRVVVISPYRT 226
Cdd:PRK08850 153 QALTAKLVVGADGANSWLRRQMDIPLTHWDYGHSALVANVRTVDPHNSVARQIFTPQGPLAFLPMSEPNMSSIVWSTEPL 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  227 QTPKDVPVTEEELKADLLRICGTDFGLTD-PSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNL 305
Cdd:PRK08850 233 RAEALLAMSDEQFNKALTAEFDNRLGLCEvVGERQAFPLKMRYARDFVRERVALVGDAAHTIHPLAGQGVNLGLLDAASL 312


                 ....*.
gi 16078114  306 GWKLAA 311
Cdd:PRK08850 313 AQEILA 318
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 5-299 1.03e-12

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 68.50  E-value: 1.03e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114     5 YEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKP--VPHSKALTlhPRTLELLEMRGILE-------RFVSKGS----- 70
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPryKPCGGALS--PRALEELDLPGELIvnlvrgaRFFSPNGdsvei 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    71 KIPTGHFSMLDtRLDFsgldtscpytlllpqsktEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFkdrDGSVRTIT 150
Cdd:TIGR02032  79 PIETELAYVID-RDAF------------------DEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIV---RGSEGTVT 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   151 SKFAVGADGAGSTVRKQ-------------AKIEFPGTDSTVTAALGDVVLlsppPSGVLslctkEGGVM-IVPLSPDRY 216
Cdd:TIGR02032 137 AKIVIGADGSRSIVAKKlglkkepreygvaARAEVEMPDEEVDEDFVEVYI----DRGIV-----PGGYGwVFPKGDGTA 207

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   217 RVVVISPYRTQTPKDVPVTEEELKAdllRICGTDFGLTDP-SWMSRFGNAARQAKRyrdGRIFLAGDAAHIHFPAGGQGL 295
Cdd:TIGR02032 208 NVGVGSRSAEEGEDPKKYLKDFLAR---RPELKDAETVEVcGALIPIGRPDEKLVR---GNVLLVGDAAGHVNPLTGEGI 281


                  ....
gi 16078114   296 NVGL 299
Cdd:TIGR02032 282 YYAM 285
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
1-312 3.20e-12

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 68.06  E-value: 3.20e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    1 MMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVP-----HSKALTLHPRTLELLEMRGILERFvsKGSKIPTG 75
Cdd:PRK07608   2 YHMKFDVVVVGGGLVGASLALALAQSGLRVALLAPRAPPRPaddawDSRVYAISPSSQAFLERLGVWQAL--DAARLAPV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   76 H----FSMLDTRLDFSGLDTSCP-YTLLLPQSKTEKLLEDHARSLGT-EVFRG-AEALAVTQNGEAVQTifkdRDGsvRT 148
Cdd:PRK07608  80 YdmrvFGDAHARLHFSAYQAGVPqLAWIVESSLIERALWAALRFQPNlTWFPArAQGLEVDPDAATLTL----ADG--QV 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  149 ITSKFAVGADGAGSTVRKQAKIefpGTDSTVTAALGDVVLLSP--PPSGVLSLCTKEGGVM-IVPLsPDRyRVVVISPYR 225
Cdd:PRK07608 154 LRADLVVGADGAHSWVRSQAGI---KAERRPYRQTGVVANFKAerPHRGTAYQWFRDDGILaLLPL-PDG-HVSMVWSAR 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  226 TQTPKD-VPVTEEELKADLLRICGTDFG----LTDPswmSRFGNAARQAKRYRDGRIFLAGDAAH-IHfPAGGQGLNVGL 299
Cdd:PRK07608 229 TAHADElLALSPEALAARVERASGGRLGrlecVTPA---AGFPLRLQRVDRLVAPRVALVGDAAHlIH-PLAGQGMNLGL 304

                        330
                 ....*....|...
gi 16078114  300 QDAMNLGWKLAAA 312
Cdd:PRK07608 305 RDVAALADVLAGR 317
COQ6 TIGR01989
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ...
 147-332 6.74e-11

ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone


Pssm-ID: 273914 [Multi-domain]  Cd Length: 437  Bit Score: 64.01  E-value: 6.74e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   147 RTITSKFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLSPP----------PSGVLSL-------------CTKE 203
Cdd:TIGR01989 168 QVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATendvawqrflPTGPIALlplpdnnstlvwsTSPE 247

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   204 GGVMIVPLSPDRYRVVVISPYRTQTP----------------KDVPVTEEELKADLL---RICGTDfgltDPSWMS---R 261
Cdd:TIGR01989 248 EALRLLSLPPEDFVDALNAAFDLGYSdhpysylldyameklnEDIGFRTEGSKSCFQvppRVIGVV----DKSRAAfplG 323

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16078114   262 FGNAARqakrYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIK-----GSapSWLLDSYHDERHPA 332
Cdd:TIGR01989 324 LGHADE----YVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSvgadiGS--ISSLKPYERERYAK 393
PRK09126 PRK09126
FAD-dependent hydroxylase;
2-343 1.61e-10

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 62.65  E-value: 1.61e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    2 MMKYEAVIIGGGPVGFMLASELAIAGVGTCVIER-----LEKPVPHSK--ALTLHprTLELLEMRGILERfvskgskIPT 74
Cdd:PRK09126   1 MMHSDIVVVGAGPAGLSFARSLAGSGLKVTLIERqplaaLADPAFDGReiALTHA--SREILQRLGAWDR-------IPE 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   75 GHFSML-DTRLdfsgLDTSCPYTLLLPQSKTeklledHARSLGTEV----FRGA--EALAVTQN-----GEAVQTIFKDR 142
Cdd:PRK09126  72 DEISPLrDAKV----LNGRSPFALTFDARGR------GADALGYLVpnhlIRRAayEAVSQQDGielltGTRVTAVRTDD 141

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  143 DGSV------RTITSKFAVGADGAGSTVRKQAKIefpGTDSTvtaALGDVVLL-----SPPPSGVLSLCTKEG-GVMIVP 210
Cdd:PRK09126 142 DGAQvtlangRRLTARLLVAADSRFSATRRQLGI---GADMH---DFGRTMLVcrmrhELPHHHTAWEWFGYGqTLALLP 215

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  211 LSPDRYRVVVISPYRtQTPKDVPVTEEELKADLLRICGTDFGLtdpswMSRFGN------AARQAKRYRDGRIFLAGDAA 284
Cdd:PRK09126 216 LNGHLSSLVLTLPPD-QIEALLALDPEAFAAEVTARFKGRLGA-----MRLVSSrhayplVAVYAHRFVAKRFALIGDAA 289

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 16078114  285 HIHFPAGGQGLNVGLQDAMNLGWKLAAAIKgsapswlldsyhDERHPAAEGLLRNTEAQ 343
Cdd:PRK09126 290 VGMHPVTAHGFNLGLKGQDILARLILAAAR------------RGQDIGAASLLERYERK 336
PRK08243 PRK08243
4-hydroxybenzoate 3-monooxygenase; Validated
 3-327 2.27e-10

4-hydroxybenzoate 3-monooxygenase; Validated


Pssm-ID: 236198 [Multi-domain]  Cd Length: 392  Bit Score: 62.51  E-value: 2.27e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    3 MKYEAVIIGGGPVGFMLASELAIAGVGTCVIER------LEKPvphsKALTLHPRTLELLEMRGILERFVSKGskIPTGH 76
Cdd:PRK08243   1 MRTQVAIIGAGPAGLLLGQLLHLAGIDSVVLERrsreyvEGRI----RAGVLEQGTVDLLREAGVGERMDREG--LVHDG 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   77 FSML----DTRLDFSGLdTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDGSVRTITSK 152
Cdd:PRK08243  75 IELRfdgrRHRIDLTEL-TGGRAVTVYGQTEVTRDLMAARLAAGGPIRFEASDVALHDFDSDRPYVTYEKDGEEHRLDCD 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  153 FAVGADGAGSTVRK---QAKI-----EFPgtdstvTAALGdvvLLS--PPPSGVLSLCTKEGG-VMIVPLSPDRYRvvvi 221
Cdd:PRK08243 154 FIAGCDGFHGVSRAsipAGALrtferVYP------FGWLG---ILAeaPPVSDELIYANHERGfALCSMRSPTRSR---- 220

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  222 spYRTQTPKDVPVTE-------EELKADLlricGTDFG---LTDPSW------MSRFgnaarQAKRYRDGRIFLAGDAAH 285
Cdd:PRK08243 221 --YYLQCPLDDKVEDwsderfwDELRRRL----PPEDAerlVTGPSIeksiapLRSF-----VAEPMQYGRLFLAGDAAH 289

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 16078114  286 IHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSwLLDSYHD 327
Cdd:PRK08243 290 IVPPTGAKGLNLAASDVRYLARALVEFYREGDTA-LLDAYSA 330
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 2-301 1.25e-08

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 56.70  E-value: 1.25e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    2 MMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLE-KPVPHSKALTLH-----PRTLELLEMRGILErfvskgskiptg 75
Cdd:PRK08849   1 MNKYDIAVVGGGMVGAATALGFAKQGRSVAVIEGGEpKAFEPSQPMDIRvsaisQTSVDLLESLGAWS------------ 68

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   76 hfSMLDTRLdfsgldtsCPYTLL----LPQSKT---------EKL---LEDHARSLGT-EVFRGAEALAVtQNGEAVQTI 138
Cdd:PRK08849  69 --SIVAMRV--------CPYKRLetweHPECRTrfhsdelnlDQLgyiVENRLIQLGLwQQFAQYPNLTL-MCPEKLADL 137

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  139 FKDRDGSVRTITS------KFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLSPP---------PSG---VLSLC 200
Cdd:PRK08849 138 EFSAEGNRVTLESgaeieaKWVIGADGANSQVRQLAGIGITAWDYRQHCMLINVETEQPQqditwqqftPSGprsFLPLC 217

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  201 TKEGGVmivplspdryrVVVISPYRTQtpKDVPVTEEELKADLLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLA 280
Cdd:PRK08849 218 GNQGSL-----------VWYDSPKRIK--QLSAMNPEQLRSEILRHFPAELGEIKVLQHGSFPLTRRHAQQYVKNNCVLL 284

                        330       340
                 ....*....|....*....|.
gi 16078114  281 GDAAHIHFPAGGQGLNVGLQD 301
Cdd:PRK08849 285 GDAAHTINPLAGQGVNLGFKD 305
PRK08773 PRK08773
UbiH/UbiF family hydroxylase;
6-305 2.93e-07

UbiH/UbiF family hydroxylase;


Pssm-ID: 181552 [Multi-domain]  Cd Length: 392  Bit Score: 52.56  E-value: 2.93e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    6 EAVIIGGGPVGFMLASELAIAGVGTCVIERLEKP-----VPHSKALTLHPRTLELLEMRGILERfVSKGSKIPTGHFSML 80
Cdd:PRK08773   8 DAVIVGGGVVGAACALALADAGLSVALVEGREPPrwqadQPDLRVYAFAADNAALLDRLGVWPA-VRAARAQPYRRMRVW 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   81 DT-----------RLDFSGLDTSCPYTLLLPQskteklLEDHARSLGTEVFRGAEALAVTQNGEAVQtiFKDRDGsvRTI 149
Cdd:PRK08773  87 DAggggelgfdadTLGREQLGWIVENDLLVDR------LWAALHAAGVQLHCPARVVALEQDADRVR--LRLDDG--RRL 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  150 TSKFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSLCTKEGGVMIVPLSPDRYRVVVISPyRTQTP 229
Cdd:PRK08773 157 EAALAIAADGAASTLRELAGLPVSRHDYAQRGVVAFVDTEHPHQATAWQRFLPTGPLALLPFADGRSSIVWTLP-DAEAE 235

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16078114  230 KDVPVTEEELKADLLRICGTDFG-LTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNL 305
Cdd:PRK08773 236 RVLALDEAAFSRELTQAFAARLGeVRVASPRTAFPLRRQLVQQYVSGRVLTLGDAAHVVHPLAGQGVNLGLRDVAAL 312
PRK06996 PRK06996
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;
108-311 1.43e-06

UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;


Pssm-ID: 235905 [Multi-domain]  Cd Length: 398  Bit Score: 50.46  E-value: 1.43e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  108 LEDHARSLGTEVFRGAEALAVTQNGEAVqTIFKDRDGSVRTITSKFAVGADGAGSTVRKQAKIEFPGT-DSTVTAALGDV 186
Cdd:PRK06996 121 LARAVRGTPVRWLTSTTAHAPAQDADGV-TLALGTPQGARTLRARIAVQAEGGLFHDQKADAGDSARRrDYGQTAIVGTV 199

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  187 VLLSPPPSGVLSLCTKEGGVMIVPLSPDR---YRVVVISPyRTQTPKDVPVTEEELKADLlricGTDFGltdpswmSRFG 263
Cdd:PRK06996 200 TVSAPRPGWAWERFTHEGPLALLPLGGPRqadYALVWCCA-PDEAARRAALPDDAFLAEL----GAAFG-------TRMG 267

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  264 NAARQAKRYR------------DGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAA 311
Cdd:PRK06996 268 RFTRIAGRHAfplglnaartlvNGRIAAVGNAAQTLHPVAGQGLNLGLRDAHTLADALSD 327
PRK07538 PRK07538
hypothetical protein; Provisional
 7-339 2.66e-06

hypothetical protein; Provisional


Pssm-ID: 236046 [Multi-domain]  Cd Length: 413  Bit Score: 49.51  E-value: 2.66e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    7 AVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGskIPT---GHFSMLDTR 83
Cdd:PRK07538   3 VLIAGGGIGGLTLALTLHQRGIEVVVFEAAPELRPLGVGINLLPHAVRELAELGLLDALDAIG--IRTrelAYFNRHGQR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   84 LdFS---GLDTSCPYtlllPQ-----SKTEKLLEDHARS-LGTEVFR-GAEALAVTQNGE-AVQTIFKDRDGSVRTITSK 152
Cdd:PRK07538  81 I-WSeprGLAAGYDW----PQysihrGELQMLLLDAVRErLGPDAVRtGHRVVGFEQDADvTVVFLGDRAGGDLVSVRGD 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  153 FAVGADGAGSTVRKQAkieFPGTDSTVtaaLGDVVL-----LSPPpsgVLSlctkeGGVMIVpLSPDRYRVVV--ISPYR 225
Cdd:PRK07538 156 VLIGADGIHSAVRAQL---YPDEGPPR---WNGVMMwrgvtEAPP---FLT-----GRSMVM-AGHLDGKLVVypISEPV 220

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  226 TQTPK-------DVPVTEEEL-----------KADLLRI-CGTDFGLTDPSWMSRfgnAARQA-----------KRYRDG 275
Cdd:PRK07538 221 DADGRqlinwvaEVRVDDAGAprredwnrpgdLEDFLPHfADWRFDWLDVPALIR---AAEAIyeypmvdrdplPRWTRG 297

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16078114  276 RIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAikgSAPSWLLDSYHDERHPAAEGL-LRN 339
Cdd:PRK07538 298 RVTLLGDAAHPMYPVGSNGASQAILDARALADALAAH---GDPEAALAAYEAERRPATAQIvLAN 359
PRK06617 PRK06617
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
 8-301 2.89e-06

2-octaprenyl-6-methoxyphenyl hydroxylase; Validated


Pssm-ID: 168629 [Multi-domain]  Cd Length: 374  Bit Score: 49.54  E-value: 2.89e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    8 VIIGGGPVGFMLASELAIAGVGTCVIERLEKPVP------HSKALTLHPRT-LELLEMRGILERFVSKGSKI---PTGHF 77
Cdd:PRK06617   5 VILGCGLSGMLTALSFAQKGIKTTIFESKSVKSPeffkdiRTTALTPHSKNfLFSIDIWEELEKFVAEMQDIyvvDNKAS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   78 SMLDTRLDFSGLdtscpYTLLLPQSKTEKLLEDHA--RSLGTEVFRGAEALAVTQNGeavQTIFKDRDgsvRTITSKFAV 155
Cdd:PRK06617  85 EILDLRNDADAV-----LGYVVKNSDFKKILLSKItnNPLITLIDNNQYQEVISHND---YSIIKFDD---KQIKCNLLI 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  156 GADGAGSTVRKQ---AKIEFPGTdstvTAALGDVVLLSPPPSGVLSLCTKEGGVMIVPLSpDRYRVVVI-SPYRTQTPKD 231
Cdd:PRK06617 154 ICDGANSKVRSHyfaNEIEKPYQ----TALTFNIKHEKPHENCAMEHFLPLGPFALLPLK-DQYASSVIwSTSSDQAALI 228

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16078114  232 VPVTEEELKADLLRICGTDFG-LTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQD 301
Cdd:PRK06617 229 VNLPVEEVRFLTQRNAGNSLGkITIDSEISSFPLKARIANRYFHNRIVLIADTAHTVHPLAGQGLNQGIKD 299
PRK07333 PRK07333
ubiquinone biosynthesis hydroxylase;
108-305 6.87e-06

ubiquinone biosynthesis hydroxylase;


Pssm-ID: 180935 [Multi-domain]  Cd Length: 403  Bit Score: 48.44  E-value: 6.87e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  108 LEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDgsvrTITSKFAVGADGAGSTVRKQAKIefpgtdSTVTAALGDvv 187
Cdd:PRK07333 117 LRKRAEALGIDLREATSVTDFETRDEGVTVTLSDGS----VLEARLLVAADGARSKLRELAGI------KTVGWDYGQ-- 184

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  188 llspppSGVLslCTKE----------------GGVMIVPLSPDRYRVVVISpyRTQTPK-----DVPVTEEELKadllri 246
Cdd:PRK07333 185 ------SGIV--CTVEherphggraeehflpaGPFAILPLKGNRSSLVWTE--RTADAErlvalDDLVFEAELE------ 248

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16078114  247 cgTDFGLtdpswmsRFG----NAARQ--------AKRYRDGRIFLAGDAAH-IHfPAGGQGLNVGLQDAMNL 305
Cdd:PRK07333 249 --QRFGH-------RLGelkvLGKRRafplgltlARSFVAPRFALVGDAAHgIH-PIAGQGLNLGLKDVAAL 310
PRK05714 PRK05714
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 147-362 9.01e-06

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 168201 [Multi-domain]  Cd Length: 405  Bit Score: 47.90  E-value: 9.01e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  147 RTITSKFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSLCTKEGGVMIVPLSPDRYR---VVVISP 223
Cdd:PRK05714 153 RQLRAPLVVAADGANSAVRRLAGCATREWDYLHHAIVTSVRCSEPHRATAWQRFTDDGPLAFLPLERDGDEhwcSIVWST 232

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  224 YRTQTPKDVPVTEEELKADLLRICGTDFGL---TDPswmsRFGNAARQ--AKRYRDGRIFLAGDAAHIHFPAGGQGLNVG 298
Cdd:PRK05714 233 TPEEAERLMALDDDAFCAALERAFEGRLGEvlsADP----RLCVPLRQrhAKRYVEPGLALIGDAAHTIHPLAGQGVNLG 308

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16078114  299 LQDAMNLGWKL-AAAIKGSAPSWL--LDSYHDERHP-------AAEGLLRNTEA-QTKLIDFTQAGLHLRSMMSE 362
Cdd:PRK05714 309 FLDAAVLAEVLlHAAERGERLADVrvLSRFERRRMPhnlalmaAMEGFERLFQAdPLPLRWLRNTGLKLVDQMPE 383
PRK06475 PRK06475
FAD-binding protein;
3-171 2.43e-05

FAD-binding protein;


Pssm-ID: 180582 [Multi-domain]  Cd Length: 400  Bit Score: 46.74  E-value: 2.43e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    3 MKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSkipTGHFSML-- 80
Cdd:PRK06475   1 TRGSPLIAGAGVAGLSAALELAARGWAVTIIEKAQELSEVGAGLQLAPNAMRHLERLGVADRLSGTGV---TPKALYLmd 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   81 ----DTRLDFSGLDTS-----CPYtLLLPQSKTEKLLEDHAR-SLGTEVFRGAEALAVTQNGEAVqTIFKDRDGSVRTIT 150
Cdd:PRK06475  78 grkaRPLLAMQLGDLArkrwhHPY-IVCHRADLQSALLDACRnNPGIEIKLGAEMTSQRQTGNSI-TATIIRTNSVETVS 155

                        170       180
                 ....*....|....*....|.
gi 16078114  151 SKFAVGADGAGSTVRKQAKIE 171
Cdd:PRK06475 156 AAYLIACDGVWSMLRAKAGFS 176
PRK07236 PRK07236
hypothetical protein; Provisional
 1-167 1.35e-04

hypothetical protein; Provisional


Pssm-ID: 235980 [Multi-domain]  Cd Length: 386  Bit Score: 44.14  E-value: 1.35e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    1 MMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKA-LTLHPRTLELLEMRGIlERFVSKGskIPTGHFSM 79
Cdd:PRK07236   3 HMSGPRAVVIGGSLGGLFAALLLRRAGWDVDVFERSPTELDGRGAgIVLQPELLRALAEAGV-ALPADIG--VPSRERIY 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   80 LDtrldfsgLDTSCPYTLLLPQSKT------EKLLedhaRSLGTEVFR-GAEALAVTQNGEAVQTIFKDrdGsvRTITSK 152
Cdd:PRK07236  80 LD-------RDGRVVQRRPMPQTQTswnvlyRALR----AAFPAERYHlGETLVGFEQDGDRVTARFAD--G--RRETAD 144

                        170
                 ....*....|....*
gi 16078114  153 FAVGADGAGSTVRKQ 167
Cdd:PRK07236 145 LLVGADGGRSTVRAQ 159
PRK08013 PRK08013
oxidoreductase; Provisional
 2-305 1.60e-04

oxidoreductase; Provisional


Pssm-ID: 236139 [Multi-domain]  Cd Length: 400  Bit Score: 43.88  E-value: 1.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    2 MMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLE-KPVPHSKALTL-----HPRTLELLEMRGILERFVSKGS----- 70
Cdd:PRK08013   1 MQSVDVVIAGGGMVGLAVACGLQGSGLRVAVLEQRVpEPLAADAPPALrvsaiNAASEKLLTRLGVWQDILARRAscyhg 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   71 -----KIPTGHFSMLDTRLDFSGLDTscpytlLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGE--AVQTIfkdRD 143
Cdd:PRK08013  81 mevwdKDSFGRIAFDDQSMGYSHLGH------IIENSVIHYALWQKAQQSSDITLLAPAELQQVAWGEneAFLTL---KD 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  144 GSVrtITSKFAVGADGAGSTVRKQAKIEFPGTDSTvTAALGDVVLLSPPPSGVLSLCTKEGGVM-IVPLSPDRYRVVV-- 220
Cdd:PRK08013 152 GSM--LTARLVVGADGANSWLRNKADIPLTFWDYQ-HHALVATIRTEEPHDAVARQVFHGDGILaFLPLSDPHLCSIVws 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  221 ISPYRTQTPKDVPVTEEElkadllRICGTDF----GLTD-PSWMSRFGNAARQAKRYRDGRIFLAGDAAH-IHfPAGGQG 294
Cdd:PRK08013 229 LSPEEAQRMQQAPEEEFN------RALAIAFdnrlGLCElESERQVFPLTGRYARQFAAHRLALVGDAAHtIH-PLAGQG 301

                        330
                 ....*....|.
gi 16078114  295 LNVGLQDAMNL 305
Cdd:PRK08013 302 VNLGFMDAAEL 312
PRK05732 PRK05732
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
 2-318 8.07e-04

2-octaprenyl-6-methoxyphenyl hydroxylase; Validated


Pssm-ID: 235584 [Multi-domain]  Cd Length: 395  Bit Score: 41.76  E-value: 8.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114    2 MMKYEAVIIGGGPVGFMLA---SELAIAGVGTCVIErlekpvPHSKALTLHP----RTLELLE-MRGILERF-------- 65
Cdd:PRK05732   1 MSRMDVIIVGGGMAGATLAlalSRLSHGGLPVALIE------AFAPESDAHPgfdaRAIALAAgTCQQLARLgvwqalad 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114   66 ---------VSKgskipTGHFSMldTRLD----------------------FSGLDTSCPYTLLLPqskteklledhARS 114
Cdd:PRK05732  75 catpithihVSD-----RGHAGF--VRLDaedygvpalgyvvelhdvgqrlFALLDKAPGVTLHCP-----------ARV 136

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  115 LGTEvfRGAEALAVT-QNGEavqtifkdrdgsvrTITSKFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLSPPP 193
Cdd:PRK05732 137 ANVE--RTQGSVRVTlDDGE--------------TLTGRLLVAADGSHSALREALGIDWQQHPYEQVAVIANVTTSEAHQ 200

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16078114  194 SGVLSLCTKEGGVMIVPLSPDRYRVVVISPyRTQTPKDVPVTEEELKADLLRicgtDFGltdpsWmsRFGN--------- 264
Cdd:PRK05732 201 GRAFERFTEHGPLALLPMSDGRCSLVWCHP-LEDAEEVLSWSDAQFLAELQQ----AFG-----W--RLGRithagkrsa 268

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 16078114  265 ---AARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAP 318
Cdd:PRK05732 269 yplALVTAAQQISHRLALVGNAAQTLHPIAGQGFNLGLRDVMSLAETLTQALARGED 325
PRK07208 PRK07208
hypothetical protein; Provisional
 1-35 1.62e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 41.03  E-value: 1.62e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 16078114    1 MMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIER 35
Cdd:PRK07208   1 MTNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEA 35
sdhA PRK06452
succinate dehydrogenase flavoprotein subunit; Reviewed
 3-45 2.23e-03

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 180567 [Multi-domain]  Cd Length: 566  Bit Score: 40.64  E-value: 2.23e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 16078114    3 MKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKA 45
Cdd:PRK06452   4 IEYDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAA 46
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
1-39 2.24e-03

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 40.51  E-value: 2.24e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 16078114   1 MMMKYEAVIIGGGPVGFMLASELAIA-GVGTCVIERLEKP 39
Cdd:COG0579   1 MMEMYDVVIIGAGIVGLALARELSRYeDLKVLVLEKEDDV 40
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 2-39 5.81e-03

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 39.06  E-value: 5.81e-03
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 16078114   2 MMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKP 39
Cdd:COG1233   1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTP 38
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
 7-61 7.66e-03

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 38.64  E-value: 7.66e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 16078114   7 AVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSK---ALTLHprtlELLEMRGI 61
Cdd:COG0446 127 AVVIGGGPIGLELAEALRKRGLKVTLVERAPRLLGVLDpemAALLE----EELREHGV 180
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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