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Conserved domains on  [gi|15610281|ref|NP_217661|]
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NADH-quinone oxidoreductase subunit A [Mycobacterium tuberculosis H37Rv]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06602 super family cl00535
NADH:ubiquinone oxidoreductase subunit A; Validated
 1-128 8.63e-61

NADH:ubiquinone oxidoreductase subunit A; Validated


The actual alignment was detected with superfamily member PRK07928:

Pssm-ID: 469809 [Multi-domain]  Cd Length: 119  Bit Score: 182.18  E-value: 8.63e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281    1 MNVYIPILVLAALAAAFAVVSVVIASLVGPSRFNRSKQAAYECGIEPAstgartsigPGAASGQRFPIKYYLTAMLFIVF 80
Cdd:PRK07928   1 MNVYIPILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPT---------PQPAGGGRFPVKYYLTAMLFIVF 71

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 15610281   81 DIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFVAYAYVWRRGGLTWD 128
Cdd:PRK07928  72 DIEIVFLYPWAVSFDALGVFGLVEMALFMLTVFVAYAYVWRRGGLEWD 119
 
Name Accession Description Interval E-value
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 1-128 8.63e-61

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 182.18  E-value: 8.63e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281    1 MNVYIPILVLAALAAAFAVVSVVIASLVGPSRFNRSKQAAYECGIEPAstgartsigPGAASGQRFPIKYYLTAMLFIVF 80
Cdd:PRK07928   1 MNVYIPILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPT---------PQPAGGGRFPVKYYLTAMLFIVF 71

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 15610281   81 DIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFVAYAYVWRRGGLTWD 128
Cdd:PRK07928  72 DIEIVFLYPWAVSFDALGVFGLVEMALFMLTVFVAYAYVWRRGGLEWD 119
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
27-125 9.08e-38

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 122.92  E-value: 9.08e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281    27 LVGPSRFNRSKQAAYECGIEPASTgartsigpgaaSGQRFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMA 106
Cdd:pfam00507   6 LLGPKRPNPEKLSPYECGFDPVGD-----------ARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGFVEML 74

                          90
                  ....*....|....*....
gi 15610281   107 IFMLTVFVAYAYVWRRGGL 125
Cdd:pfam00507  75 IFIAILLVGLVYAWKKGAL 93
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-127 2.78e-37

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 122.54  E-value: 2.78e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   1 MNVYIPILVLAALAAAFAVVSVVIASLVGPSRFNRSKQAAYECGIEPastgartsIGPGaasGQRFPIKYYLTAMLFIVF 80
Cdd:COG0838   2 LSDYLPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEP--------VGDA---RIRFSVRYYLVALLFVIF 70

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 15610281  81 DIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFVAYAYVWRRGGLTW 127
Cdd:COG0838  71 DVEVVFLFPWAVVFRELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 1-128 8.63e-61

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 182.18  E-value: 8.63e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281    1 MNVYIPILVLAALAAAFAVVSVVIASLVGPSRFNRSKQAAYECGIEPAstgartsigPGAASGQRFPIKYYLTAMLFIVF 80
Cdd:PRK07928   1 MNVYIPILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPT---------PQPAGGGRFPVKYYLTAMLFIVF 71

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 15610281   81 DIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFVAYAYVWRRGGLTWD 128
Cdd:PRK07928  72 DIEIVFLYPWAVSFDALGVFGLVEMALFMLTVFVAYAYVWRRGGLEWD 119
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
27-125 9.08e-38

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 122.92  E-value: 9.08e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281    27 LVGPSRFNRSKQAAYECGIEPASTgartsigpgaaSGQRFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMA 106
Cdd:pfam00507   6 LLGPKRPNPEKLSPYECGFDPVGD-----------ARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGFVEML 74

                          90
                  ....*....|....*....
gi 15610281   107 IFMLTVFVAYAYVWRRGGL 125
Cdd:pfam00507  75 IFIAILLVGLVYAWKKGAL 93
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-127 2.78e-37

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 122.54  E-value: 2.78e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   1 MNVYIPILVLAALAAAFAVVSVVIASLVGPSRFNRSKQAAYECGIEPastgartsIGPGaasGQRFPIKYYLTAMLFIVF 80
Cdd:COG0838   2 LSDYLPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEP--------VGDA---RIRFSVRYYLVALLFVIF 70

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 15610281  81 DIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFVAYAYVWRRGGLTW 127
Cdd:COG0838  71 DVEVVFLFPWAVVFRELGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 27-128 1.90e-30

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 105.33  E-value: 1.90e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   27 LVGPSRFNRSKQAAYECGIEPAStGARTsigpgaasgqRFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMA 106
Cdd:PRK06602  31 LLGPRAPDREKNSPYESGFEAFG-DARM----------KFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGFVEAM 99

                         90       100
                 ....*....|....*....|..
gi 15610281  107 IFMLTVFVAYAYVWRRGGLTWD 128
Cdd:PRK06602 100 IFILVLLVGLVYLWRKGALDWE 121
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
27-127 4.88e-25

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 91.73  E-value: 4.88e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   27 LVGPSRFNRSKQAAYECGIEPASTgartsigpgaaSGQRFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMA 106
Cdd:PRK07756  32 MLRPNKPSAAKATTYESGIEPFHD-----------ANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLFALIEML 100

                         90       100
                 ....*....|....*....|.
gi 15610281  107 IFMLTVFVAYAYVWRRGGLTW 127
Cdd:PRK07756 101 IFVVMLLVGLAYAWKKKVLQW 121
ndhC CHL00022
NADH dehydrogenase subunit 3
 26-127 3.00e-22

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 84.65  E-value: 3.00e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   26 SLVGPSRFNRSKQAAYECGIEPAstgartsigpGAASGQrFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEM 105
Cdd:CHL00022  29 GLLAPISKGPEKLSSYESGIEPM----------GDAWLQ-FRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAFIEA 97

                         90       100
                 ....*....|....*....|..
gi 15610281  106 AIFMLTVFVAYAYVWRRGGLTW 127
Cdd:CHL00022  98 LIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
35-127 3.24e-21

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 82.02  E-value: 3.24e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   35 RSKQAAYECGIEPASTGARTSIgpgaasgqrfpiKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFV 114
Cdd:PRK08489  45 KLKLAIYECGPEPVKQPNRISS------------HFYIMALLFILFDVEIVFMFPWAVDFKLLGLFGLIEMLLFIVLLTI 112

                         90
                 ....*....|...
gi 15610281  115 AYAYVWRRGGLTW 127
Cdd:PRK08489 113 GFIYAWKKGALEW 125
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 34-128 4.12e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 68.55  E-value: 4.12e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   34 NRSKQAAYECGIEPASTgartsigpgaaSGQRFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVF 113
Cdd:MTH00018  30 DREKVSAYECGFDPFGF-----------PGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWTMVGFLFILT 98

                         90
                 ....*....|....*
gi 15610281  114 VAYAYVWRRGGLTWD 128
Cdd:MTH00018  99 LGLIYEWIKGGLEWE 113
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 26-128 8.03e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 65.72  E-value: 8.03e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   26 SLVGPSRFNRSKQAAYECGIEPASTgARTSigpgaasgqrFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEM 105
Cdd:MTH00030  32 SRIGLTKPDSEKSSIYECGFDPFGK-IRTP----------FTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIV 100

                         90       100
                 ....*....|....*....|...
gi 15610281  106 AIFMLTVFVAYAYVWRRGGLTWD 128
Cdd:MTH00030 101 YTFLIVLAIGLAYEWIKGGLEWD 123
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 27-128 5.89e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 63.19  E-value: 5.89e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   27 LVGPSRFNRSKQAAYECGIEPASTgartsigpgaaSGQRFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMA 106
Cdd:MTH00055  28 IVGVKQPDSEKVSVYECGFDPFES-----------SRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMY 96

                         90       100
                 ....*....|....*....|..
gi 15610281  107 IFMLTVFVAYAYVWRRGGLTWD 128
Cdd:MTH00055  97 LFLIILTIGLIYEWVKGGLEWE 118
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 31-127 1.25e-10

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 54.48  E-value: 1.25e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   31 SRFNRSKQAAYECGIEPAStGARTSigpgaasgqrFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEM-AIFM 109
Cdd:MTH00148  29 SYSDREKSSPFECGFDPIS-SARSP----------FSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSlFIFL 97

                         90
                 ....*....|....*...
gi 15610281  110 LTVFVAYAYVWRRGGLTW 127
Cdd:MTH00148  98 LILILGLFHEWNEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 27-127 1.84e-09

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 51.40  E-value: 1.84e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   27 LVGPSRFNRSKQAAYECGIEPASTgARtsigpgaasgQRFPIKYYLTAMLFIVFDIEIVFLYPW-AVSYDSLGTFALVEM 105
Cdd:MTH00012  25 LAARSTADREKTSPFECGFDPHKT-AR----------IPFSLRFFLLAIIFIVFDIEIVLLMPVpTILMTSTSKTVVYTS 93

                         90       100
                 ....*....|....*....|..
gi 15610281  106 AIFMLTVFVAYAYVWRRGGLTW 127
Cdd:MTH00012  94 ILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 33-127 2.25e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 51.32  E-value: 2.25e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   33 FNRSKQAAYECGIEPASTgARTSigpgaasgqrFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFA-LVEMAIFMLT 111
Cdd:MTH00161  29 MDREKSSPFECGFDPKSS-ARLP----------FSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSwLITSSFFILI 97

                         90
                 ....*....|....*.
gi 15610281  112 VFVAYAYVWRRGGLTW 127
Cdd:MTH00161  98 LLLGLYYEWNQGALEW 113
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 68-127 2.37e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 51.74  E-value: 2.37e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   68 IKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFVAYAYVWRRGGLTW 127
Cdd:PRK06432  83 NQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPFIETLIFLAMPLFAVYYAFKMGYMRW 142
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 37-127 1.07e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 49.55  E-value: 1.07e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   37 KQAAYECGIEPASTgARTSigpgaasgqrFPIKYYLTAMLFIVFDIEIVFLY--PWAVSYDSLGTfaLVEMAIFMLTVFV 114
Cdd:MTH00106  33 KASPYECGFDPMGS-ARLP----------FSMKFFLVAITFLLFDLEIALLLplPWASQTNNLNT--MLTMALLLISLLA 99

                         90
                 ....*....|....
gi 15610281  115 A-YAYVWRRGGLTW 127
Cdd:MTH00106 100 LsLAYEWTQKGLEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 33-127 1.73e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 48.84  E-value: 1.73e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   33 FNRSKQAAYECGIEPASTgARTSigpgaasgqrFPIKYYLTAMLFIVFDIEIVFLYPWAVS-YDSLGTFALVEMAIFMLT 111
Cdd:MTH00202  31 MDREKSSPFECGFDPKES-ARLP----------FSMRFFLLAVIFLVFDIEIALLLPLPLVlKSSWSKGGLLGGTIFLLI 99

                         90
                 ....*....|....*.
gi 15610281  112 VFVAYAYVWRRGGLTW 127
Cdd:MTH00202 100 LIGGLIHEWKEGSLDW 115
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 37-127 4.67e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 47.58  E-value: 4.67e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   37 KQAAYECGIEPASTgartSIGPgaasgqrFPIKYYLTAMLFIVFDIEIVFLYPWAVSyDSLGTFALVEMAIFMLTVFVAY 116
Cdd:MTH00203  34 KLSPYECGFDPLGS----ARLP-------FSLQFFLVALSFLLFDLEIALLLPLPWS-NQLSSLSLLLAFLFLILLTLGL 101

                         90
                 ....*....|.
gi 15610281  117 AYVWRRGGLTW 127
Cdd:MTH00203 102 IYEWLQGGLEW 112
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 30-127 5.87e-08

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 47.67  E-value: 5.87e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   30 PSRFNRS-KQAAYECGIEPASTgARTSigpgaasgqrFPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMA-I 107
Cdd:MTH00042  26 PSRSPDLeKSSPYECGFDPLNS-ARLP----------FSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISlI 94

                         90       100
                 ....*....|....*....|
gi 15610281  108 FMLTVFVAYAYVWRRGGLTW 127
Cdd:MTH00042  95 FLIILTIGLVYEWVNGGLEW 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 37-127 2.07e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 46.14  E-value: 2.07e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   37 KQAAYECGIEPASTgARTSigpgaasgqrFPIKYYLTAMLFIVFDIEIVFLY--PWAVSYDS-LGTFALVEMAIFMLTvf 113
Cdd:MTH00069  32 KLSPYECGFDPLGS-ARLP----------FSIRFFLVAILFLLFDLEIALLLptPWASQLNTpTNTLFWSTLILILLT-- 98

                         90
                 ....*....|....
gi 15610281  114 VAYAYVWRRGGLTW 127
Cdd:MTH00069  99 LGLIYEWIQGGLEW 112
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 37-127 2.65e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 45.68  E-value: 2.65e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   37 KQAAYECGIEPASTgARTSigpgaasgqrFPIKYYLTAMLFIVFDIEIVFLYP--WAVSYDS-LGTFALVEMAIFMLTVF 113
Cdd:MTH00136  34 KLSPYECGFDPLGS-ARLP----------FSLRFFLVAILFLLFDLEIALLLPlpWGDQLPSpLLTFFWATAVLILLTLG 102

                         90
                 ....*....|....
gi 15610281  114 VAYAyvWRRGGLTW 127
Cdd:MTH00136 103 LIYE--WLQGGLEW 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 41-127 4.72e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 45.26  E-value: 4.72e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15610281   41 YECGIEPASTgARTSigpgaasgqrFPIKYYLTAMLFIVFDIEIVFLYP--WAVSYDSLGTFALVEMAIFMLtVFVAYAY 118
Cdd:MTH00113  37 YECGFDPLGS-ARLP----------FSIRFFLVAILFLLFDLEIALLLPlpWAINLTTPTTTLTWATIILTL-LTLGLIY 104


                 ....*....
gi 15610281  119 VWRRGGLTW 127
Cdd:MTH00113 105 EWLQGGLEW 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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