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Conserved domains on  [gi|186504335|ref|NP_180627|]
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lateral signaling target-like protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

Protein Classification

zein-binding domain-containing protein( domain architecture ID 10518975)

zein-binding domain-containing protein similar to Zea mays protein FLOURY 1 that is involved in protein body development and 22 kDa alpha-zein localization

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Zein-binding pfam04576
Zein-binding; This domain binds to zein proteins, pfam01559. Zein proteins are seed storage ...
 614-705 3.64e-40

Zein-binding; This domain binds to zein proteins, pfam01559. Zein proteins are seed storage proteins.


:

Pssm-ID: 428019 [Multi-domain]  Cd Length: 92  Bit Score: 142.28  E-value: 3.64e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186504335  614 EVLKQQLEHGRKSLRDLNKEFEEERNASAIATNQAMAMITRLQEEKAALHMEALQYLRMMDEQAEHDMDALERANDVLAD 693
Cdd:pfam04576   1 EALREAVEEERQSIQALYAELEEERNASASAANEAMAMILRLQEEKAAVEMEARQYKRMAEEKMEYDQEEIESLEDLLYQ 80

                          90
                  ....*....|..
gi 186504335  694 REKEIQDLEMEL 705
Cdd:pfam04576  81 REKEIQALEKEL 92
 
Name Accession Description Interval E-value
Zein-binding pfam04576
Zein-binding; This domain binds to zein proteins, pfam01559. Zein proteins are seed storage ...
 614-705 3.64e-40

Zein-binding; This domain binds to zein proteins, pfam01559. Zein proteins are seed storage proteins.


Pssm-ID: 428019 [Multi-domain]  Cd Length: 92  Bit Score: 142.28  E-value: 3.64e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186504335  614 EVLKQQLEHGRKSLRDLNKEFEEERNASAIATNQAMAMITRLQEEKAALHMEALQYLRMMDEQAEHDMDALERANDVLAD 693
Cdd:pfam04576   1 EALREAVEEERQSIQALYAELEEERNASASAANEAMAMILRLQEEKAAVEMEARQYKRMAEEKMEYDQEEIESLEDLLYQ 80

                          90
                  ....*....|..
gi 186504335  694 REKEIQDLEMEL 705
Cdd:pfam04576  81 REKEIQALEKEL 92
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 604-706 1.87e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 41.85  E-value: 1.87e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186504335 604 SSDIEGESLVEVLKQQLEHGRKSLRDLNKEFEEERNASAIATNQAMAMITRLQEEKAALHMEALQYLRMMDEQAEHDMDA 683
Cdd:COG1196  672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751

                         90       100
                 ....*....|....*....|....*.
gi 186504335 684 LERANDVLADR---EKEIQDLEMELE 706
Cdd:COG1196  752 ALEELPEPPDLeelERELERLEREIE 777
 
Name Accession Description Interval E-value
Zein-binding pfam04576
Zein-binding; This domain binds to zein proteins, pfam01559. Zein proteins are seed storage ...
 614-705 3.64e-40

Zein-binding; This domain binds to zein proteins, pfam01559. Zein proteins are seed storage proteins.


Pssm-ID: 428019 [Multi-domain]  Cd Length: 92  Bit Score: 142.28  E-value: 3.64e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186504335  614 EVLKQQLEHGRKSLRDLNKEFEEERNASAIATNQAMAMITRLQEEKAALHMEALQYLRMMDEQAEHDMDALERANDVLAD 693
Cdd:pfam04576   1 EALREAVEEERQSIQALYAELEEERNASASAANEAMAMILRLQEEKAAVEMEARQYKRMAEEKMEYDQEEIESLEDLLYQ 80

                          90
                  ....*....|..
gi 186504335  694 REKEIQDLEMEL 705
Cdd:pfam04576  81 REKEIQALEKEL 92
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 604-706 1.87e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 41.85  E-value: 1.87e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186504335 604 SSDIEGESLVEVLKQQLEHGRKSLRDLNKEFEEERNASAIATNQAMAMITRLQEEKAALHMEALQYLRMMDEQAEHDMDA 683
Cdd:COG1196  672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751

                         90       100
                 ....*....|....*....|....*.
gi 186504335 684 LERANDVLADR---EKEIQDLEMELE 706
Cdd:COG1196  752 ALEELPEPPDLeelERELERLEREIE 777
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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