|
Name |
Accession |
Description |
Interval |
E-value |
| CCDC34 |
pfam13904 |
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several ... |
102-321 |
1.24e-38 |
|
Coiled-coil domain-containing protein 3; This family is found in eukaryotes; it has several conserved tryptophan residues. The function is not known.
Pssm-ID: 464032 [Multi-domain] Cd Length: 221 Bit Score: 137.53 E-value: 1.24e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 102 DSEAKVASLRGMELQgcASTQVESENNQEEQKQVRLPESRLTPWEVWFIGKeKEERDRlqlkalEELNQQLEKRKEMEER 181
Cdd:pfam13904 16 EEESSKHRVPSLSLD--SSSQSSSLTYARKLEGLKLERQPLEAYENWLAAK-QRQRQK------ELQAQKEEREKEEQEA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 182 EKRKIIAEEKHKEWVQKKNEQKRKEREQKINKEMEEKAAKEL---EKEYLQEKAKEKYQEWLKKKNAEECERKKKEKEKE 258
Cdd:pfam13904 87 ELRKRLAKEKYQEWLQRKARQQTKKREESHKQKAAESASKSLakpERKVSQEEAKEVLQEWERKKLEQQQRKREEEQREQ 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 63054848 259 KQQQAEIQEKKEIAEKKFQEWLENAKHKPRPAAKSYGYANGKLTGfysgnsypEPAFYNPIPW 321
Cdd:pfam13904 167 LKKEEEEQERKQLAEKAWQKWMKNVKNKPKPVPLNQGFDSLRGTV--------SPIYINPIPW 221
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
152-293 |
2.78e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 152 KEKEERDRLQLKALEELNQQLEKRKEMEEREKRKIIAEEKHKEWVQKKNEQKRKEREQKINKEMEEKAAKELEKeylQEK 231
Cdd:PTZ00121 1339 EEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKK---AAA 1415
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 63054848 232 AKEKYQEWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKfqewlENAKHKPRPAAKS 293
Cdd:PTZ00121 1416 AKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA-----EEAKKKAEEAKKA 1472
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
106-278 |
3.63e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.82 E-value: 3.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 106 KVASLRGMELQGCASTQVESENNQEEQKQVRLPESRLTPWEVWFIGKEKEERDRLQLKALEELNQqLEKRKEMEEREKRK 185
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK-IKAAEEAKKAEEDK 1674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 186 IIAEEKHKEwvqkkNEQKRKEREQKINKEMEEKAAKELEKEYLQEKAK----EKYQEWLKKKNAEECERKKKEKEKEKQQ 261
Cdd:PTZ00121 1675 KKAEEAKKA-----EEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKaeelKKAEEENKIKAEEAKKEAEEDKKKAEEA 1749
|
170
....*....|....*..
gi 63054848 262 QAEIQEKKEIAEKKFQE 278
Cdd:PTZ00121 1750 KKDEEEKKKIAHLKKEE 1766
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
152-292 |
3.99e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.82 E-value: 3.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 152 KEKEERDRLQLKALEELNQQLEKRKEMEEREKRKIIAEEKHKEWVQKKNEQKRKEREQKinKEMEEKAAKELEKeylqeK 231
Cdd:PTZ00121 1238 DAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAK--KAEEKKKADEAKK-----K 1310
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 63054848 232 AKEKYQEWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKFQEWLENAKHKPRPAAK 292
Cdd:PTZ00121 1311 AEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEK 1371
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
122-291 |
4.58e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.44 E-value: 4.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 122 QVESENNQEEQKQVRLPESRLTPWEVWFIgKEKEERDRLQLKALEELNQ--QLEKRKEMEEREKRKIIAEEKHK-EWVQK 198
Cdd:PTZ00121 1244 KAEEERNNEEIRKFEEARMAHFARRQAAI-KAEEARKADELKKAEEKKKadEAKKAEEKKKADEAKKKAEEAKKaDEAKK 1322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 199 KNEQKRKEREQKINKEMEEKAAKELEKEYLQEKAKEKYQEWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKFQE 278
Cdd:PTZ00121 1323 KAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEE 1402
|
170
....*....|...
gi 63054848 279 WLENAKHKPRPAA 291
Cdd:PTZ00121 1403 DKKKADELKKAAA 1415
|
|
| CCDC47 |
pfam07946 |
PAT complex subunit CCDC47; This family represents CCDC47 proteins which are a component of ... |
186-235 |
6.01e-04 |
|
PAT complex subunit CCDC47; This family represents CCDC47 proteins which are a component of the PAT complex, an endoplasmic reticulum (ER)-resident membrane multiprotein complex that facilitates multi-pass membrane proteins insertion into membranes. The PAT complex, formed by CCDC47 and Asterix proteins, acts as an intramembrane chaperone by directly interacting with nascent transmembrane domains (TMDs), releasing its substrates upon correct folding, and is needed for optimal biogenesis of multi-pass membrane proteins. CCDC47 is required to maintain the stability of Asterix. CCDC47 is associated with various membrane-associated processes and is component of a ribosome-associated ER translocon complex involved in multi-pass membrane protein transport into the ER membrane and biogenesis. It is also involved in the regulation of calcium ion homeostasis in the ER, being also required for proper protein degradation via the ERAD (ER-associated degradation) pathway.
Pssm-ID: 462322 Cd Length: 323 Bit Score: 41.40 E-value: 6.01e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 63054848 186 IIAEEKHKEWVQKKNEQKRKEREQKINKEMEEKAAKELEKEylQEKAKEK 235
Cdd:pfam07946 276 AAEEERAEEAQEKKEEAKKKEREEKLAKLSPEEQRKYEEKE--RKKEQRK 323
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
155-292 |
7.07e-04 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 41.33 E-value: 7.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 155 EERDRLQLKALEELNQQLEKRKEMEEREKRKIIAEEKHKEwvqKKNEQKRKEREQKinKEMEEKAAKELEKEYLQEKAKE 234
Cdd:PRK09510 79 EQRKKKEQQQAEELQQKQAAEQERLKQLEKERLAAQEQKK---QAEEAAKQAALKQ--KQAEEAAAKAAAAAKAKAEAEA 153
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 63054848 235 KYQEWLKKKNAeecERKKKEKEKEKQQQAEIQEKKEIAEKKFQEWLENAKHKPRPAAK 292
Cdd:PRK09510 154 KRAAAAAKKAA---AEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAK 208
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
197-275 |
1.58e-03 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 40.17 E-value: 1.58e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 63054848 197 QKKNEQKRKEREQKINKEMEEKAAKELEKeyLQEKAKEKYQEWLKKKNAeeceRKKKEKEKEKQQQAEIQEKKEIAEKK 275
Cdd:PRK09510 74 AKRAEEQRKKKEQQQAEELQQKQAAEQER--LKQLEKERLAAQEQKKQA----EEAAKQAALKQKQAEEAAAKAAAAAK 146
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
152-281 |
2.21e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.12 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 152 KEKEERDRLQLKALEELNQ----------QLEKRKEMEEREKRKIIAEEKHKEWVQKKNEQKRKEREQKINKEMEE-KAA 220
Cdd:PTZ00121 1570 KKAEEDKNMALRKAEEAKKaeearieevmKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEkKKA 1649
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 63054848 221 KELEKEylQEKAKEKYQEWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKFQEWLE 281
Cdd:PTZ00121 1650 EELKKA--EEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELK 1708
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
152-290 |
3.26e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.74 E-value: 3.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 152 KEKEERDRLQLkalEELNQQLEKRKEMEEREKRKIIAEEKHKEWVQKKNEQKRKEREQKINKEMEEKAAKELEKEYLQEK 231
Cdd:PTZ00121 1363 EEKAEAAEKKK---EEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKK 1439
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 232 AKEKYQ-EWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKFQEWLENAKHKPRPA 290
Cdd:PTZ00121 1440 AEEAKKaDEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKA 1499
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
119-278 |
3.91e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.35 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 119 ASTQVESENNQEEQKQVRLPESRLTPWEVWFIGKEKEERDRLQLKAlEELNQQLEKRKEMEEREKRKIIAEEKHKEwVQK 198
Cdd:PTZ00121 1355 AADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKA-EEDKKKADELKKAAAAKKKADEAKKKAEE-KKK 1432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 199 KNEQKRKEREQKINKEMEEKAAKELEKEYLQEKAKE--KYQEWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKF 276
Cdd:PTZ00121 1433 ADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEakKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKA 1512
|
..
gi 63054848 277 QE 278
Cdd:PTZ00121 1513 DE 1514
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
152-288 |
6.45e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 38.97 E-value: 6.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 152 KEKEERDRLQLKALEELNQQLEKRKEMEEREKRKIIAEE--KHKEWVQKKNEQKRKEREQKINKEMEEKAAKELEKEYLQ 229
Cdd:PTZ00121 1397 KKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEakKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAK 1476
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 63054848 230 EKAKEKYQEWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKFQEWLENAKHKPR 288
Cdd:PTZ00121 1477 KKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKK 1535
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
188-288 |
8.95e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 38.20 E-value: 8.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 63054848 188 AEEKHK-EWVQKKNEQKRKEREQKINKEMEEKAAKELEKEYLQEKAKEKYQEWLKKKNAEECERKKKEKEKEKQQQAEiq 266
Cdd:PTZ00121 1466 AEEAKKaDEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAE-- 1543
|
90 100
....*....|....*....|..
gi 63054848 267 EKKEIAEKKFQEWLENAKHKPR 288
Cdd:PTZ00121 1544 EKKKADELKKAEELKKAEEKKK 1565
|
|
|