gem-associated protein 7 [Homo sapiens]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Gemin7 | cd11677 | Gemin 7; Gemins 7, together with the survival motor neuron (SMN) protein, other Gemins, and ... |
54-130 | 2.53e-43 | ||
Gemin 7; Gemins 7, together with the survival motor neuron (SMN) protein, other Gemins, and Unr-interacting protein (UNRIP) form the SMN complex, which plays an important role in the Sm core assembly reaction, by binding directly to the Sm proteins, as well as UsnRNAs. Gemin 7 forms a heterodimer with Gemin 6, which serve as a surrogate for the SmB-SmD3 dimer during the formation of the heptameric Sm ring. : Pssm-ID: 212488 Cd Length: 77 Bit Score: 136.62 E-value: 2.53e-43
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| SUZ-C super family | cl15152 | SUZ-C motif; The SUZ-C domain is a conserved motif found in one or more copies in several ... |
8-25 | 6.30e-03 | ||
SUZ-C motif; The SUZ-C domain is a conserved motif found in one or more copies in several RNA-binding proteins. It is always found at the C-terminus of the protein and appear to be required for localization of the protein to specific subcellular structures. It was first characterized in the C.elegans protein Szy-20 which localizes to the centrosome. It is widely distributed in eukaryotes. The actual alignment was detected with superfamily member pfam12901: Pssm-ID: 463745 Cd Length: 33 Bit Score: 32.51 E-value: 6.30e-03
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| Name | Accession | Description | Interval | E-value | ||
| Gemin7 | cd11677 | Gemin 7; Gemins 7, together with the survival motor neuron (SMN) protein, other Gemins, and ... |
54-130 | 2.53e-43 | ||
Gemin 7; Gemins 7, together with the survival motor neuron (SMN) protein, other Gemins, and Unr-interacting protein (UNRIP) form the SMN complex, which plays an important role in the Sm core assembly reaction, by binding directly to the Sm proteins, as well as UsnRNAs. Gemin 7 forms a heterodimer with Gemin 6, which serve as a surrogate for the SmB-SmD3 dimer during the formation of the heptameric Sm ring. Pssm-ID: 212488 Cd Length: 77 Bit Score: 136.62 E-value: 2.53e-43
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| Gemin7 | pfam11095 | Gem-associated protein 7 (Gemin7); Gemin7 is a novel component of the survival of motor neuron ... |
54-129 | 5.02e-40 | ||
Gem-associated protein 7 (Gemin7); Gemin7 is a novel component of the survival of motor neuron complex which functions in the assembly of spliceosomal small nuclear ribonucleoproteins. Gemin7 interacts with several Sm proteins of spliceosomal small nuclear ribonucleoproteins, especially SmE. Pssm-ID: 463219 Cd Length: 76 Bit Score: 128.46 E-value: 5.02e-40
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| SUZ-C | pfam12901 | SUZ-C motif; The SUZ-C domain is a conserved motif found in one or more copies in several ... |
8-25 | 6.30e-03 | ||
SUZ-C motif; The SUZ-C domain is a conserved motif found in one or more copies in several RNA-binding proteins. It is always found at the C-terminus of the protein and appear to be required for localization of the protein to specific subcellular structures. It was first characterized in the C.elegans protein Szy-20 which localizes to the centrosome. It is widely distributed in eukaryotes. Pssm-ID: 463745 Cd Length: 33 Bit Score: 32.51 E-value: 6.30e-03
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| Name | Accession | Description | Interval | E-value | ||
| Gemin7 | cd11677 | Gemin 7; Gemins 7, together with the survival motor neuron (SMN) protein, other Gemins, and ... |
54-130 | 2.53e-43 | ||
Gemin 7; Gemins 7, together with the survival motor neuron (SMN) protein, other Gemins, and Unr-interacting protein (UNRIP) form the SMN complex, which plays an important role in the Sm core assembly reaction, by binding directly to the Sm proteins, as well as UsnRNAs. Gemin 7 forms a heterodimer with Gemin 6, which serve as a surrogate for the SmB-SmD3 dimer during the formation of the heptameric Sm ring. Pssm-ID: 212488 Cd Length: 77 Bit Score: 136.62 E-value: 2.53e-43
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| Gemin7 | pfam11095 | Gem-associated protein 7 (Gemin7); Gemin7 is a novel component of the survival of motor neuron ... |
54-129 | 5.02e-40 | ||
Gem-associated protein 7 (Gemin7); Gemin7 is a novel component of the survival of motor neuron complex which functions in the assembly of spliceosomal small nuclear ribonucleoproteins. Gemin7 interacts with several Sm proteins of spliceosomal small nuclear ribonucleoproteins, especially SmE. Pssm-ID: 463219 Cd Length: 76 Bit Score: 128.46 E-value: 5.02e-40
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| Sm_like | cd00600 | Sm and related proteins; The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to ... |
70-128 | 9.57e-06 | ||
Sm and related proteins; The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes. Pssm-ID: 212462 [Multi-domain] Cd Length: 63 Bit Score: 40.69 E-value: 9.57e-06
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| SUZ-C | pfam12901 | SUZ-C motif; The SUZ-C domain is a conserved motif found in one or more copies in several ... |
8-25 | 6.30e-03 | ||
SUZ-C motif; The SUZ-C domain is a conserved motif found in one or more copies in several RNA-binding proteins. It is always found at the C-terminus of the protein and appear to be required for localization of the protein to specific subcellular structures. It was first characterized in the C.elegans protein Szy-20 which localizes to the centrosome. It is widely distributed in eukaryotes. Pssm-ID: 463745 Cd Length: 33 Bit Score: 32.51 E-value: 6.30e-03
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