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Conserved domains on  [gi|31563526|ref|NP_065740|]
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sodium/potassium/calcium exchanger 3 precursor [Homo sapiens]

Protein Classification

putative sodium/potassium/calcium exchanger( domain architecture ID 1001229)

putative sodium/potassium/calcium exchanger

Gene Ontology:  GO:0005886|GO:0015293|GO:0006811
PubMed:  15163769
TCDB:  2.A.19

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A1904 super family cl36772
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
90-629 6.03e-108

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


The actual alignment was detected with superfamily member TIGR00927:

Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 350.83  E-value: 6.03e-108
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526     90 PALH---EFPNDIFTNEDRRQGAVVLHVLCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFT 166
Cdd:TIGR00927  434 PDLHpkaEYPPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFT 513
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    167 SVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVALSSWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVL 246
Cdd:TIGR00927  514 SLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWPLFRDVSFYILDLMMLILFFLDSLIAWWESLLLLL 593
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    247 MYLIYIVIMKYNACIH----QCFERR-----------TKGA-------GNMVNGLAN-----NAEIDDSSNCDA------ 293
Cdd:TIGR00927  594 AYALYVFTMKWNKQIElwvkEQLSRRpvakvmalgdlSKGDvaeaehtGERTGEEGErpteaEGENGEESGGEAeqeget 673
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    294 -TVVLLK---------------KANFHRKASVIMVDELLSAYPHQLSFSEAGLRimITSHFPPKTRLSMASRMLINERQ- 356
Cdd:TIGR00927  674 eTKGENEsegeipaerkgeqegEGEIEAKEADHKGETEAEEVEHEGETEAEGTE--DEGEIETGEEGEEVEDEGEGEAEg 751
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    357 RLINSRAYTNGESEVAIKIPIKHTVENGTGPSSAPDRG-VNGTRRDDVVAEAGNETENENEDNENDEEEEEDEDDDEGPY 435
Cdd:TIGR00927  752 KHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGeMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDE 831
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    436 T--------------------------------------------------------------PFDTPSGKLETVKWAFT 453
Cdd:TIGR00927  832 TgeqelnaenqgeakqdekgvdggggsdggdseeeeeeeeeeeeeeeeeeeeeeeeeeneeplSLEWPETRQKQAIYLFL 911
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    454 WPLSFVLYFTVPNCNKPRWEKWFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVA 533
Cdd:TIGR00927  912 LPIVFPLWLTVPDVRRQEARKFFVITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVA 991
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    534 RQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLaVDYGSYIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWQLDKKLGCG 613
Cdd:TIGR00927  992 RKGLGDMAVSSSVGSNIFDITVGLPVPWLLFSL-INGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFT 1070
                          650
                   ....*....|....*.
gi 31563526    614 CLLLYGVFLCFSIMTE 629
Cdd:TIGR00927 1071 MFLLYFVFLIISVMLE 1086
 
Name Accession Description Interval E-value
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
90-629 6.03e-108

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 350.83  E-value: 6.03e-108
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526     90 PALH---EFPNDIFTNEDRRQGAVVLHVLCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFT 166
Cdd:TIGR00927  434 PDLHpkaEYPPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFT 513
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    167 SVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVALSSWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVL 246
Cdd:TIGR00927  514 SLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWPLFRDVSFYILDLMMLILFFLDSLIAWWESLLLLL 593
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    247 MYLIYIVIMKYNACIH----QCFERR-----------TKGA-------GNMVNGLAN-----NAEIDDSSNCDA------ 293
Cdd:TIGR00927  594 AYALYVFTMKWNKQIElwvkEQLSRRpvakvmalgdlSKGDvaeaehtGERTGEEGErpteaEGENGEESGGEAeqeget 673
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    294 -TVVLLK---------------KANFHRKASVIMVDELLSAYPHQLSFSEAGLRimITSHFPPKTRLSMASRMLINERQ- 356
Cdd:TIGR00927  674 eTKGENEsegeipaerkgeqegEGEIEAKEADHKGETEAEEVEHEGETEAEGTE--DEGEIETGEEGEEVEDEGEGEAEg 751
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    357 RLINSRAYTNGESEVAIKIPIKHTVENGTGPSSAPDRG-VNGTRRDDVVAEAGNETENENEDNENDEEEEEDEDDDEGPY 435
Cdd:TIGR00927  752 KHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGeMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDE 831
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    436 T--------------------------------------------------------------PFDTPSGKLETVKWAFT 453
Cdd:TIGR00927  832 TgeqelnaenqgeakqdekgvdggggsdggdseeeeeeeeeeeeeeeeeeeeeeeeeeneeplSLEWPETRQKQAIYLFL 911
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    454 WPLSFVLYFTVPNCNKPRWEKWFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVA 533
Cdd:TIGR00927  912 LPIVFPLWLTVPDVRRQEARKFFVITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVA 991
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    534 RQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLaVDYGSYIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWQLDKKLGCG 613
Cdd:TIGR00927  992 RKGLGDMAVSSSVGSNIFDITVGLPVPWLLFSL-INGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFT 1070
                          650
                   ....*....|....*.
gi 31563526    614 CLLLYGVFLCFSIMTE 629
Cdd:TIGR00927 1071 MFLLYFVFLIISVMLE 1086
ECM27 COG0530
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
130-624 5.12e-34

Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];


Pssm-ID: 440296 [Multi-domain]  Cd Length: 293  Bit Score: 131.41  E-value: 5.12e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 130 DFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGqvVALS 209
Cdd:COG0530   2 DLLVRGADALARRLGISPLVIGLTIVAFGTSLPELAVSVTAALDGSPDIAVGNVVGSNIANILLILGLAALIRP--LAVD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 210 SWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIYIVimkynacihqcferrtkgagnmvnglannaeiddss 289
Cdd:COG0530  80 RRVLRRDLPFLLLASLLLLALLLDGTLSRIDGVILLLLYVLYLY------------------------------------ 123
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 290 ncdatvvllkkanfhrkasvimvdellsayphqlsfseaglrimitshfppktrlsmasRMLINERQRlinsraytnges 369
Cdd:COG0530 124 -----------------------------------------------------------YLIRRARKE------------ 132
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 370 evaikipikhtvengtgpssapdrgvngtRRDDVVAEagnetenenednendeeeeededddegpytpfDTPSGKLETVK 449
Cdd:COG0530 133 -----------------------------PAWEEVEE--------------------------------ELEEKPKMSLW 151
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 450 WAFTWplsfvlyftvpncnkprwekwfmvtFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMAS 529
Cdd:COG0530 152 KALLL-------------------------LVLGLALLVVGARLLVDGAVEIARALGVSELVIGLTIVAIGTSLPELATS 206
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 530 LIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGSYIRLnsrgliySVGLLLASVFVTVFGvhLNKWQLDKK 609
Cdd:COG0530 207 IVAARKGEDDLAVGNIIGSNIFNILLVLGIGALITPIPVDPAVLSFD-------LPVMLAATLLLLGLL--RTGGRIGRW 277
                       490
                ....*....|....*
gi 31563526 610 LGCGCLLLYGVFLCF 624
Cdd:COG0530 278 EGLLLLALYLAYLAL 292
Na_Ca_ex pfam01699
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral ...
113-255 9.82e-28

Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3.


Pssm-ID: 426387 [Multi-domain]  Cd Length: 149  Bit Score: 108.84  E-value: 9.82e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   113 HVLCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNIL 192
Cdd:pfam01699   1 LSLLLFILGLLLISVAADLLVDSAEVLARVLGISGTVLGLTILALGTSLPELVSSIIAALRGEPDLALGNVIGSNIFNIL 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 31563526   193 CIIGVCGLFAGQVVALS----SWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIYIVIM 255
Cdd:pfam01699  81 LVLGLSALIGPVKVDSLllklDLGVLLLVALLLLLLLLLLLLPLFGRLSRFEGLVLLLLYIVYLVFQ 147
PLN03151 PLN03151
cation/calcium exchanger; Provisional
108-638 1.39e-17

cation/calcium exchanger; Provisional


Pssm-ID: 215604 [Multi-domain]  Cd Length: 650  Bit Score: 86.74  E-value: 1.39e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  108 GAVVLHVlCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSvIGVFITK--GDVGVGTIVG 185
Cdd:PLN03151 139 GYAVLGV-WLVALFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFAS-IAAFVGKdaGEVGLNSVLG 216
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  186 SAVFNILCIIGVCGL-FAGQVVALSSWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIYIVIMKYNAcIHQC 264
Cdd:PLN03151 217 GAVFVTCVVVGIVSLcVADKEVQIDKRCFIRDLCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVAANE-ILRK 295
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  265 FERRTKgagnmvnglannaeiddssnCDATVVLLKKANFHRKASvimVDELLSAYPHQL-SFSEAGlrimitshfPPKTR 343
Cdd:PLN03151 296 HARRLK--------------------LDVVTPLLPVQGSIFSPS---VEEDESMYSPLLeSDTESD---------VPRLQ 343
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  344 LSMASRMLinerqrlinsraytngESEVAIKipIKHTVENGTGPSSAPDRGVNgtrrdDVVAEAGNETENENEDNENDEE 423
Cdd:PLN03151 344 TSLPQWMW----------------ASNVAIY--SNHFAKGSVHDEERPPWGWT-----DEGAEVESSLFSCSKLFSLLEM 400
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  424 EEEDEDDDEGPYT-------PFDTPSGKLETVKWAFTW-----------------------PLSFVLY-FTVPNcNKPR- 471
Cdd:PLN03151 401 PLTIPRRLTIPIVeedrwskTYAVASASLAPVLLAFLWssqddvslqariaayfigvaigsTLGFLAYkYTEPD-RPPRr 479
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  472 -WEKWFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGmGD---MAVSNSIG 547
Cdd:PLN03151 480 fLIPWVLGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNG-GDgvqIAMSGCYA 558
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  548 SNVFDILIGLGLPWALQTLAVDYGSYIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWQLDKKLGCGCLLLYGVFLCFSIM 627
Cdd:PLN03151 559 GPMFNTLVGLGMSMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRVS 638
                        570
                 ....*....|.
gi 31563526  628 TEFNVFTFVNL 638
Cdd:PLN03151 639 TAMGFIPWAGL 649
 
Name Accession Description Interval E-value
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
90-629 6.03e-108

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 350.83  E-value: 6.03e-108
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526     90 PALH---EFPNDIFTNEDRRQGAVVLHVLCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFT 166
Cdd:TIGR00927  434 PDLHpkaEYPPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFT 513
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    167 SVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVALSSWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVL 246
Cdd:TIGR00927  514 SLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWPLFRDVSFYILDLMMLILFFLDSLIAWWESLLLLL 593
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    247 MYLIYIVIMKYNACIH----QCFERR-----------TKGA-------GNMVNGLAN-----NAEIDDSSNCDA------ 293
Cdd:TIGR00927  594 AYALYVFTMKWNKQIElwvkEQLSRRpvakvmalgdlSKGDvaeaehtGERTGEEGErpteaEGENGEESGGEAeqeget 673
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    294 -TVVLLK---------------KANFHRKASVIMVDELLSAYPHQLSFSEAGLRimITSHFPPKTRLSMASRMLINERQ- 356
Cdd:TIGR00927  674 eTKGENEsegeipaerkgeqegEGEIEAKEADHKGETEAEEVEHEGETEAEGTE--DEGEIETGEEGEEVEDEGEGEAEg 751
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    357 RLINSRAYTNGESEVAIKIPIKHTVENGTGPSSAPDRG-VNGTRRDDVVAEAGNETENENEDNENDEEEEEDEDDDEGPY 435
Cdd:TIGR00927  752 KHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGeMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDE 831
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    436 T--------------------------------------------------------------PFDTPSGKLETVKWAFT 453
Cdd:TIGR00927  832 TgeqelnaenqgeakqdekgvdggggsdggdseeeeeeeeeeeeeeeeeeeeeeeeeeneeplSLEWPETRQKQAIYLFL 911
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    454 WPLSFVLYFTVPNCNKPRWEKWFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVA 533
Cdd:TIGR00927  912 LPIVFPLWLTVPDVRRQEARKFFVITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVA 991
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526    534 RQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLaVDYGSYIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWQLDKKLGCG 613
Cdd:TIGR00927  992 RKGLGDMAVSSSVGSNIFDITVGLPVPWLLFSL-INGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFT 1070
                          650
                   ....*....|....*.
gi 31563526    614 CLLLYGVFLCFSIMTE 629
Cdd:TIGR00927 1071 MFLLYFVFLIISVMLE 1086
TIGR00367 TIGR00367
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ...
112-605 4.63e-43

K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]


Pssm-ID: 273039 [Multi-domain]  Cd Length: 307  Bit Score: 157.10  E-value: 4.63e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   112 LHVLCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNI 191
Cdd:TIGR00367   1 LLLIGYLILGLILLIYGADLFVKSSVRIARHLGISPLIIGVTVVAIGTSLPELFTSLIASLMGQPDIGVGNVIGSNIFNI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   192 LCIIGVCGLFAGQVVAlsSWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIYivimkynacihqcferrtkg 271
Cdd:TIGR00367  81 LLILGLSAIFSPIIVD--KDWLRRDILFYLLVSILLLFFGLDGQISRIDGVVLLILYIVY-------------------- 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   272 agnmvnglannaeiddssncdaTVVLLKKanfhrkasvimvdellsayphqlsfseaglrimitshfppktrlsmasrml 351
Cdd:TIGR00367 139 ----------------------LLFLVKN--------------------------------------------------- 145
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   352 inerQRLINSRAYTngesevaikipikhtvengtgpssapdrgvngtrrddvvaeagnetenenednendeeeeededdd 431
Cdd:TIGR00367 146 ----ERWVKYDTYT------------------------------------------------------------------ 155
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   432 egpytpfDTPSGKLETVKWAFTWPLSFVLYFTvpncnkprwekwfmvtfasstlWIAAFSYMMVWMVTIIGYTLGIPDVI 511
Cdd:TIGR00367 156 -------EENLDENNRRPQIFFSLVLLIIGLI----------------------GLVVGSRLLVDGAVKIAEILGISEKI 206
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   512 MGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGSYIRLNSRGLIYSVGLLLas 591
Cdd:TIGR00367 207 IGLTLLAIGTSLPELVVSLAAARKGLGDIAVGNVIGSNIFNILVGLGVPSLFMPIPVEPLAYNLDAPVMVIVTLLLML-- 284
                         490
                  ....*....|....
gi 31563526   592 vfVTVFGVHLNKWQ 605
Cdd:TIGR00367 285 --FFKTSMKLGRWE 296
ECM27 COG0530
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
130-624 5.12e-34

Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];


Pssm-ID: 440296 [Multi-domain]  Cd Length: 293  Bit Score: 131.41  E-value: 5.12e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 130 DFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGqvVALS 209
Cdd:COG0530   2 DLLVRGADALARRLGISPLVIGLTIVAFGTSLPELAVSVTAALDGSPDIAVGNVVGSNIANILLILGLAALIRP--LAVD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 210 SWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIYIVimkynacihqcferrtkgagnmvnglannaeiddss 289
Cdd:COG0530  80 RRVLRRDLPFLLLASLLLLALLLDGTLSRIDGVILLLLYVLYLY------------------------------------ 123
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 290 ncdatvvllkkanfhrkasvimvdellsayphqlsfseaglrimitshfppktrlsmasRMLINERQRlinsraytnges 369
Cdd:COG0530 124 -----------------------------------------------------------YLIRRARKE------------ 132
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 370 evaikipikhtvengtgpssapdrgvngtRRDDVVAEagnetenenednendeeeeededddegpytpfDTPSGKLETVK 449
Cdd:COG0530 133 -----------------------------PAWEEVEE--------------------------------ELEEKPKMSLW 151
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 450 WAFTWplsfvlyftvpncnkprwekwfmvtFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMAS 529
Cdd:COG0530 152 KALLL-------------------------LVLGLALLVVGARLLVDGAVEIARALGVSELVIGLTIVAIGTSLPELATS 206
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 530 LIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGSYIRLnsrgliySVGLLLASVFVTVFGvhLNKWQLDKK 609
Cdd:COG0530 207 IVAARKGEDDLAVGNIIGSNIFNILLVLGIGALITPIPVDPAVLSFD-------LPVMLAATLLLLGLL--RTGGRIGRW 277
                       490
                ....*....|....*
gi 31563526 610 LGCGCLLLYGVFLCF 624
Cdd:COG0530 278 EGLLLLALYLAYLAL 292
Na_Ca_ex pfam01699
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral ...
113-255 9.82e-28

Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3.


Pssm-ID: 426387 [Multi-domain]  Cd Length: 149  Bit Score: 108.84  E-value: 9.82e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   113 HVLCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNIL 192
Cdd:pfam01699   1 LSLLLFILGLLLISVAADLLVDSAEVLARVLGISGTVLGLTILALGTSLPELVSSIIAALRGEPDLALGNVIGSNIFNIL 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 31563526   193 CIIGVCGLFAGQVVALS----SWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIYIVIM 255
Cdd:pfam01699  81 LVLGLSALIGPVKVDSLllklDLGVLLLVALLLLLLLLLLLLPLFGRLSRFEGLVLLLLYIVYLVFQ 147
Na_Ca_ex pfam01699
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral ...
475-627 1.34e-26

Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3.


Pssm-ID: 426387 [Multi-domain]  Cd Length: 149  Bit Score: 105.76  E-value: 1.34e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   475 WFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSIGSNVFDIL 554
Cdd:pfam01699   1 LSLLLFILGLLLISVAADLLVDSAEVLARVLGISGTVLGLTILALGTSLPELVSSIIAALRGEPDLALGNVIGSNIFNIL 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 31563526   555 IGLGLPWALQTLAVDyGSYIRLNSRGLIYSVGLLLASVFVTVFgvhLNKWQLDKKLGCGCLLLYGVFLCFSIM 627
Cdd:pfam01699  81 LVLGLSALIGPVKVD-SLLLKLDLGVLLLVALLLLLLLLLLLL---PLFGRLSRFEGLVLLLLYIVYLVFQIV 149
ECM27 COG0530
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
89-255 1.82e-23

Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];


Pssm-ID: 440296 [Multi-domain]  Cd Length: 293  Bit Score: 100.98  E-value: 1.82e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  89 EPALHEFPNDIFTNEDRRQGAVVLHVLCAIymfyALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSV 168
Cdd:COG0530 132 EPAWEEVEEELEEKPKMSLWKALLLLVLGL----ALLVVGARLLVDGAVEIARALGVSELVIGLTIVAIGTSLPELATSI 207
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 169 IGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGqvVALSSWCLLRDSIYYTLSVIALIVFIY-DEKVSWWESLVLVLM 247
Cdd:COG0530 208 VAARKGEDDLAVGNIIGSNIFNILLVLGIGALITP--IPVDPAVLSFDLPVMLAATLLLLGLLRtGGRIGRWEGLLLLAL 285

                ....*...
gi 31563526 248 YLIYIVIM 255
Cdd:COG0530 286 YLAYLALL 293
PLN03151 PLN03151
cation/calcium exchanger; Provisional
108-638 1.39e-17

cation/calcium exchanger; Provisional


Pssm-ID: 215604 [Multi-domain]  Cd Length: 650  Bit Score: 86.74  E-value: 1.39e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  108 GAVVLHVlCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSvIGVFITK--GDVGVGTIVG 185
Cdd:PLN03151 139 GYAVLGV-WLVALFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFAS-IAAFVGKdaGEVGLNSVLG 216
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  186 SAVFNILCIIGVCGL-FAGQVVALSSWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIYIVIMKYNAcIHQC 264
Cdd:PLN03151 217 GAVFVTCVVVGIVSLcVADKEVQIDKRCFIRDLCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVAANE-ILRK 295
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  265 FERRTKgagnmvnglannaeiddssnCDATVVLLKKANFHRKASvimVDELLSAYPHQL-SFSEAGlrimitshfPPKTR 343
Cdd:PLN03151 296 HARRLK--------------------LDVVTPLLPVQGSIFSPS---VEEDESMYSPLLeSDTESD---------VPRLQ 343
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  344 LSMASRMLinerqrlinsraytngESEVAIKipIKHTVENGTGPSSAPDRGVNgtrrdDVVAEAGNETENENEDNENDEE 423
Cdd:PLN03151 344 TSLPQWMW----------------ASNVAIY--SNHFAKGSVHDEERPPWGWT-----DEGAEVESSLFSCSKLFSLLEM 400
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  424 EEEDEDDDEGPYT-------PFDTPSGKLETVKWAFTW-----------------------PLSFVLY-FTVPNcNKPR- 471
Cdd:PLN03151 401 PLTIPRRLTIPIVeedrwskTYAVASASLAPVLLAFLWssqddvslqariaayfigvaigsTLGFLAYkYTEPD-RPPRr 479
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  472 -WEKWFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGmGD---MAVSNSIG 547
Cdd:PLN03151 480 fLIPWVLGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNG-GDgvqIAMSGCYA 558
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  548 SNVFDILIGLGLPWALQTLAVDYGSYIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWQLDKKLGCGCLLLYGVFLCFSIM 627
Cdd:PLN03151 559 GPMFNTLVGLGMSMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRVS 638
                        570
                 ....*....|.
gi 31563526  628 TEFNVFTFVNL 638
Cdd:PLN03151 639 TAMGFIPWAGL 649
caca TIGR00845
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ...
104-315 4.14e-15

sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]


Pssm-ID: 273296 [Multi-domain]  Cd Length: 928  Bit Score: 79.07  E-value: 4.14e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   104 DRRQGAVVLHVLcAIYMFYALAIVCDDFFV----------------PSLEKICERLHL-SEDVAGATFMAAGSSAPELFT 166
Cdd:TIGR00845  70 DKIARATVYFVA-MVYMFLGVSIIADRFMAsievitsqekeitikkPNGETTVTTVRIwNETVSNLTLMALGSSAPEILL 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   167 SVIGVF---ITKGDVGVGTIVGSAVFNILCIIGVCGLF--AGQVVAL---------SSWcllrdSIY-YTLSVIALIVFI 231
Cdd:TIGR00845 149 SVIEVCghnFEAGDLGPSTIVGSAAFNMFIIIAICVYVipDGETRKIkhlrvffvtAAW-----SVFaYVWLYLILAVFS 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   232 YDEkVSWWESLvLVLMYLIYIVIMKYNACIHQCFE-------RRTKGAGNMVNGLANNAEIDDSSNCDATVVLLKKANFH 304
Cdd:TIGR00845 224 PGV-VEVWEGL-LTFFFFPLCVVFAWVADRRLLFYkyvykryRAGKQRGMIIETEGDRPKSKTEIEMDGKMVNSHVDNFL 301
                         250
                  ....*....|.
gi 31563526   305 RKASVIMVDEL 315
Cdd:TIGR00845 302 DGALVLEVKEF 312
TIGR00367 TIGR00367
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ...
103-251 1.88e-13

K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]


Pssm-ID: 273039 [Multi-domain]  Cd Length: 307  Bit Score: 71.59  E-value: 1.88e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   103 EDRRQGAVVLHVLCAIYMFYALAIVCDdFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGT 182
Cdd:TIGR00367 161 ENNRRPQIFFSLVLLIIGLIGLVVGSR-LLVDGAVKIAEILGISEKIIGLTLLAIGTSLPELVVSLAAARKGLGDIAVGN 239
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 31563526   183 IVGSAVFNILCIIGVCGLFA-GQVVALSswcLLRD-SIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIY 251
Cdd:TIGR00367 240 VIGSNIFNILVGLGVPSLFMpIPVEPLA---YNLDaPVMVIVTLLLMLFFKTSMKLGRWEGILLLALYIAY 307
ECM27 COG0530
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
505-629 2.10e-13

Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];


Pssm-ID: 440296 [Multi-domain]  Cd Length: 293  Bit Score: 71.32  E-value: 2.10e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526 505 LGIPDVIMGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDygsyirlnSRGLIYS 584
Cdd:COG0530  15 LGISPLVIGLTIVAFGTSLPELAVSVTAALDGSPDIAVGNVVGSNIANILLILGLAALIRPLAVD--------RRVLRRD 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 31563526 585 VGLLLASVFVTVFGVHLNkwQLDKKLGCGCLLLYGVFLCFSIMTE 629
Cdd:COG0530  87 LPFLLLASLLLLALLLDG--TLSRIDGVILLLLYVLYLYYLIRRA 129
PRK10734 PRK10734
putative calcium/sodium:proton antiporter; Provisional
493-635 2.20e-13

putative calcium/sodium:proton antiporter; Provisional


Pssm-ID: 182684 [Multi-domain]  Cd Length: 325  Bit Score: 71.60  E-value: 2.20e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  493 MMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYGS 572
Cdd:PRK10734 192 MVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALISPGEINPLA 271
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 31563526  573 YIRlnsrglIYSVgLLLASVFVTVFGvhlnkWQLDKKLG--CGCLLLYGVFLCFSIMTEFNVFTF 635
Cdd:PRK10734 272 FSR------DYWV-MLLVSVIFALLC-----WRRKRRIGrgAGALLLGGFIVWLAMLYWLSPILV 324
TIGR00367 TIGR00367
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ...
499-626 8.59e-12

K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]


Pssm-ID: 273039 [Multi-domain]  Cd Length: 307  Bit Score: 66.58  E-value: 8.59e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   499 TIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVDYgSYIRLNS 578
Cdd:TIGR00367  26 VRIARHLGISPLIIGVTVVAIGTSLPELFTSLIASLMGQPDIGVGNVIGSNIFNILLILGLSAIFSPIIVDK-DWLRRDI 104
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 31563526   579 RGLIYSVGLLLasvFVTVFGvhlnkwQLDKKLGCGCLLLYGVFLCFSI 626
Cdd:TIGR00367 105 LFYLLVSILLL---FFGLDG------QISRIDGVVLLILYIVYLLFLV 143
caca TIGR00845
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ...
459-596 1.52e-10

sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]


Pssm-ID: 273296 [Multi-domain]  Cd Length: 928  Bit Score: 64.43  E-value: 1.52e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   459 VLYFTVPNCNkpRWEKWfmVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGMG 538
Cdd:TIGR00845 742 VLFAFVPPTE--YWGGW--ACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQY 817
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 31563526   539 -DMAVSNSIGSNVFDILIGLGLPWalqTLAVDY----GSYIRLNSRGLIYSVGLLLASVFVTV 596
Cdd:TIGR00845 818 aDASIGNVTGSNAVNVFLGIGVAW---SIAAIYhaanGTQFKVSPGTLAFSVTLFTIFAFICI 877
PRK10734 PRK10734
putative calcium/sodium:proton antiporter; Provisional
494-626 1.95e-10

putative calcium/sodium:proton antiporter; Provisional


Pssm-ID: 182684 [Multi-domain]  Cd Length: 325  Bit Score: 62.74  E-value: 1.95e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  494 MVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVdYGSY 573
Cdd:PRK10734  22 LVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILLILGLAALIRPFTV-HSDV 100
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 31563526  574 IRLNsrgliysvglLLASVFVTVF-GVHLNKWQLDKKLGCGCLLLYGVFLCFSI 626
Cdd:PRK10734 101 LRRE----------LPLMLLVSVLaGSVLYDGQLSRSDGIFLLLLAVLWLLFIV 144
PRK10734 PRK10734
putative calcium/sodium:proton antiporter; Provisional
111-255 5.29e-07

putative calcium/sodium:proton antiporter; Provisional


Pssm-ID: 182684 [Multi-domain]  Cd Length: 325  Bit Score: 51.96  E-value: 5.29e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  111 VLHVLCAIYMFYALAIVCDDFFVPSLekicerlhlsedVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFN 190
Cdd:PRK10734  13 LLLVYGADRLVFAASILCRTFGIPPL------------IIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITN 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 31563526  191 ILCIIGVCGLFAGQVVALSswcLLRDSIYYTLSVIALI-VFIYDEKVSWWESLVLVLMYLIYIVIM 255
Cdd:PRK10734  81 ILLILGLAALIRPFTVHSD---VLRRELPLMLLVSVLAgSVLYDGQLSRSDGIFLLLLAVLWLLFI 143
PRK10734 PRK10734
putative calcium/sodium:proton antiporter; Provisional
145-222 5.89e-07

putative calcium/sodium:proton antiporter; Provisional


Pssm-ID: 182684 [Multi-domain]  Cd Length: 325  Bit Score: 51.96  E-value: 5.89e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526  145 LSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGL-----FAGQVVALSSWCLLRDSIY 219
Cdd:PRK10734 206 ISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALispgeINPLAFSRDYWVMLLVSVI 285

                 ...
gi 31563526  220 YTL 222
Cdd:PRK10734 286 FAL 288
caca2 TIGR00846
calcium/proton exchanger; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the ...
126-251 1.64e-03

calcium/proton exchanger; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is generated from the calcium ion/proton exchangers of the CacA family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273297 [Multi-domain]  Cd Length: 363  Bit Score: 41.29  E-value: 1.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31563526   126 IVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIgvcglfagQV 205
Cdd:TIGR00846 232 ILLADYLVDTIDDAVDSWGLSVAFIGLILAPIVGNAAEHVTAVKAALKNKLDLALGVALGSALQIILFVV--------PL 303
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 31563526   206 VALSSWCLLRD---------SIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIY 251
Cdd:TIGR00846 304 VVLVAWMLGIPmdlnfgtfeTIVLALSLFLTTITLQDGRSNYLEGAVLLALYIII 358
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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