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plexin domain-containing protein 1 precursor [Homo sapiens]
NIDO and PSI domain-containing protein( domain architecture ID 10250010)
NIDO and PSI domain-containing protein
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
PSI | pfam01437 | Plexin repeat; A cysteine rich repeat found in several different extracellular receptors. The ... |
303-347 | 1.98e-08 | |||
Plexin repeat; A cysteine rich repeat found in several different extracellular receptors. The function of the repeat is unknown. Three copies of the repeat are found Plexin. Two copies of the repeat are found in mahogany protein. A related C. elegans protein contains four copies of the repeat. The Met receptor contains a single copy of the repeat. The Pfam alignment shows 6 conserved cysteine residues that may form three conserved disulphide bridges, whereas some members show 8 conserved cysteines. The pattern of conservation suggests that cysteines 5 and 7 (that are not absolutely conserved) form a disulphide bridge (Personal observation. A Bateman). : Pssm-ID: 396154 [Multi-domain] Cd Length: 52 Bit Score: 50.40 E-value: 1.98e-08
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NIDO super family | cl02648 | Nidogen-like; This is a nidogen-like domain (NIDO) domain and is an extracellular domain found ... |
152-242 | 4.10e-04 | |||
Nidogen-like; This is a nidogen-like domain (NIDO) domain and is an extracellular domain found in nidogen and hypothetical proteins of unknown function. The actual alignment was detected with superfamily member smart00539: Pssm-ID: 470642 Cd Length: 152 Bit Score: 40.87 E-value: 4.10e-04
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Name | Accession | Description | Interval | E-value | |||
PSI | pfam01437 | Plexin repeat; A cysteine rich repeat found in several different extracellular receptors. The ... |
303-347 | 1.98e-08 | |||
Plexin repeat; A cysteine rich repeat found in several different extracellular receptors. The function of the repeat is unknown. Three copies of the repeat are found Plexin. Two copies of the repeat are found in mahogany protein. A related C. elegans protein contains four copies of the repeat. The Met receptor contains a single copy of the repeat. The Pfam alignment shows 6 conserved cysteine residues that may form three conserved disulphide bridges, whereas some members show 8 conserved cysteines. The pattern of conservation suggests that cysteines 5 and 7 (that are not absolutely conserved) form a disulphide bridge (Personal observation. A Bateman). Pssm-ID: 396154 [Multi-domain] Cd Length: 52 Bit Score: 50.40 E-value: 1.98e-08
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PSI | smart00423 | domain found in Plexins, Semaphorins and Integrins; |
304-347 | 4.96e-07 | |||
domain found in Plexins, Semaphorins and Integrins; Pssm-ID: 214655 [Multi-domain] Cd Length: 47 Bit Score: 46.38 E-value: 4.96e-07
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NIDO | smart00539 | Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins; |
152-242 | 4.10e-04 | |||
Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins; Pssm-ID: 214712 Cd Length: 152 Bit Score: 40.87 E-value: 4.10e-04
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Name | Accession | Description | Interval | E-value | |||
PSI | pfam01437 | Plexin repeat; A cysteine rich repeat found in several different extracellular receptors. The ... |
303-347 | 1.98e-08 | |||
Plexin repeat; A cysteine rich repeat found in several different extracellular receptors. The function of the repeat is unknown. Three copies of the repeat are found Plexin. Two copies of the repeat are found in mahogany protein. A related C. elegans protein contains four copies of the repeat. The Met receptor contains a single copy of the repeat. The Pfam alignment shows 6 conserved cysteine residues that may form three conserved disulphide bridges, whereas some members show 8 conserved cysteines. The pattern of conservation suggests that cysteines 5 and 7 (that are not absolutely conserved) form a disulphide bridge (Personal observation. A Bateman). Pssm-ID: 396154 [Multi-domain] Cd Length: 52 Bit Score: 50.40 E-value: 1.98e-08
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PSI | smart00423 | domain found in Plexins, Semaphorins and Integrins; |
304-347 | 4.96e-07 | |||
domain found in Plexins, Semaphorins and Integrins; Pssm-ID: 214655 [Multi-domain] Cd Length: 47 Bit Score: 46.38 E-value: 4.96e-07
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NIDO | smart00539 | Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins; |
152-242 | 4.10e-04 | |||
Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins; Pssm-ID: 214712 Cd Length: 152 Bit Score: 40.87 E-value: 4.10e-04
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Blast search parameters | ||||
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