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Conserved domains on  [gi|61743916|ref|NP_057436|]
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carboxypeptidase A4 isoform 1 preproprotein [Homo sapiens]

Protein Classification

M14 family carboxypeptidase A( domain architecture ID 10491431)

M14 family carboxypeptidase A hydrolyzes single, C-terminal amino acids from polypeptide chains; it favors hydrophobic residues

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
M14_CPA cd03870
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup; Peptidase M14 ...
118-419 0e+00

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup; Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA4, detected in hormone-regulated tissues, is thought to play a role in prostate cancer.


:

Pssm-ID: 349442 [Multi-domain]  Cd Length: 301  Bit Score: 609.82  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 118 FNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGkGVRRPAVWLNAGIHSREWISQATAIWTARK 197
Cdd:cd03870   1 FNYAAYHTLEEIYFWMDNLVAEHPNLVSKLQIGSSFENRPMYVLKFSTG-GEERPAIWIDAGIHSREWVTQASAIWTAEK 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 198 IVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVY 277
Cdd:cd03870  80 IVSDYGKDPSITSILDTMDIFLEIVTNPDGYVFTHSSNRLWRKTRSVNPGSLCIGVDPNRNWDAGFGGPGASSNPCSETY 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 278 HGPHANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTCT 357
Cdd:cd03870 160 HGPHANSEVEVKSIVDFIQSHGNFKAFISIHSYSQLLMYPYGYTVEKAPDQEELDEVAKKAVKALASLHGTEYKVGSIST 239
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 61743916 358 TVYPASGSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHVRDN 419
Cdd:cd03870 240 TIYQASGSSIDWAYDNGIKYAFTFELRDTGRYGFLLPANQIIPTAEETWLALKTIMEHVRDH 301
Propep_M14 pfam02244
Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic ...
27-101 3.36e-22

Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic secretions. The pro-segment moiety (activation peptide) accounts for up to a quarter of the total length of the peptidase, and is responsible for modulation of folding and activity of the pro-enzyme.


:

Pssm-ID: 460505  Cd Length: 73  Bit Score: 89.58  E-value: 3.36e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 61743916    27 LRINVRNGDEISKLSQLvnSNNLKLNFWKSPSSFNRPVDVLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNE 101
Cdd:pfam02244   1 YRVTPETEEQLQLLKEL--EESYDLDFWKPPSKVGKPVDVMVPPSKLEAFEELLEKHGISYEVLIEDVQELIDEE 73
 
Name Accession Description Interval E-value
M14_CPA cd03870
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup; Peptidase M14 ...
118-419 0e+00

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup; Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA4, detected in hormone-regulated tissues, is thought to play a role in prostate cancer.


Pssm-ID: 349442 [Multi-domain]  Cd Length: 301  Bit Score: 609.82  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 118 FNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGkGVRRPAVWLNAGIHSREWISQATAIWTARK 197
Cdd:cd03870   1 FNYAAYHTLEEIYFWMDNLVAEHPNLVSKLQIGSSFENRPMYVLKFSTG-GEERPAIWIDAGIHSREWVTQASAIWTAEK 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 198 IVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVY 277
Cdd:cd03870  80 IVSDYGKDPSITSILDTMDIFLEIVTNPDGYVFTHSSNRLWRKTRSVNPGSLCIGVDPNRNWDAGFGGPGASSNPCSETY 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 278 HGPHANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTCT 357
Cdd:cd03870 160 HGPHANSEVEVKSIVDFIQSHGNFKAFISIHSYSQLLMYPYGYTVEKAPDQEELDEVAKKAVKALASLHGTEYKVGSIST 239
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 61743916 358 TVYPASGSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHVRDN 419
Cdd:cd03870 240 TIYQASGSSIDWAYDNGIKYAFTFELRDTGRYGFLLPANQIIPTAEETWLALKTIMEHVRDH 301
Peptidase_M14 pfam00246
Zinc carboxypeptidase;
129-408 1.49e-142

Zinc carboxypeptidase;


Pssm-ID: 459730 [Multi-domain]  Cd Length: 287  Bit Score: 407.84  E-value: 1.49e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916   129 IYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVR---RPAVWLNAGIHSREWISQATAIWTARKIVSDYQRD 205
Cdd:pfam00246   1 IEAWLDALAARYPDLVRLVSIGKSVEGRPLKVLKISSGPGEHnpgKPAVFIDGGIHAREWIGPATALYLIHQLLTNYGRD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916   206 PAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSE 285
Cdd:pfam00246  81 PEITELLDDTDIYILPVVNPDGYEYTHTTDRLWRKNRSNANGSSCIGVDLNRNFPDHWNEVGASSNPCSETYRGPAPFSE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916   286 VEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVK-KAPDAEELDKVARLAAKALAS-VSGTEYQVGPT-CTTVYPA 362
Cdd:pfam00246 161 PETRAVADFIRSKKPFVLYISLHSYSQVLLYPYGYTRDePPPDDEELKSLARAAAKALQKmVRGTSYTYGITnGATIYPA 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 61743916   363 SGSSIDWAYDN-GIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLG 408
Cdd:pfam00246 241 SGGSDDWAYGRlGIKYSYTIELRDTGRYGFLLPASQIIPTAEETWEA 287
Zn_pept smart00631
Zn_pept domain;
123-402 1.07e-135

Zn_pept domain;


Pssm-ID: 214748 [Multi-domain]  Cd Length: 277  Bit Score: 390.16  E-value: 1.07e-135
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916    123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSREWISQATAIWTARKIVSDY 202
Cdd:smart00631   1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISNGGSHDKPAIFIDAGIHAREWIGPATALYLINQLLENY 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916    203 QRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNpgSSCIGADPNRNWNASFAGkgaSDNPCSEVYHGPHA 282
Cdd:smart00631  81 GRDPRVTNLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPN--SNCRGVDLNRNFPFHWGE---TGNPCSETYAGPSP 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916    283 NSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVK-KAPDAEELDKVARLAAKALASVSGTEYQVGPTCTTVYP 361
Cdd:smart00631 156 FSEPETKAVRDFIRSNRRFKLYIDLHSYSQLILYPYGYTKNdLPPNVDDLDAVAKALAKALASVHGTRYTYGISNGAIYP 235
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 61743916    362 ASGSSIDWAYD-NGIKFAFTFELRDTGTYGFLLPANQIIPTA 402
Cdd:smart00631 236 ASGGSDDWAYGvLGIPFSFTLELRDDGRYGFLLPPSQIIPTG 277
MpaA COG2866
Murein tripeptide amidase MpaA [Cell wall/membrane/envelope biogenesis];
119-321 2.10e-33

Murein tripeptide amidase MpaA [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442113 [Multi-domain]  Cd Length: 337  Bit Score: 127.88  E-value: 2.10e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 119 NYGAYHSLEAIYHEMDNIAADfPDLARRVKIGHSFENRPMYVLKFSTGKGvRRPAVWLNAGIHSREWISQATAIWTARKI 198
Cdd:COG2866  15 SYDRYYTYEELLALLAKLAAA-SPLVELESIGKSVEGRPIYLLKIGDPAE-GKPKVLLNAQQHGNEWTGTEALLGLLEDL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 199 VSDYqrDPAITSILEKMDIFLLPVANPDGYVytqtqnRLWRKTRsrnpgsscIGADPNRNWNASFAgkgasdnpcsevyh 278
Cdd:COG2866  93 LDNY--DPLIRALLDNVTLYIVPMLNPDGAE------RNTRTNA--------NGVDLNRDWPAPWL-------------- 142
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 61743916 279 gphanSEVEVKSVVDFIQKHgNFKGFIDLHSYSQLLMYPYGYS 321
Cdd:COG2866 143 -----SEPETRALRDLLDEH-DPDFVLDLHGQGELFYWFVGTT 179
Propep_M14 pfam02244
Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic ...
27-101 3.36e-22

Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic secretions. The pro-segment moiety (activation peptide) accounts for up to a quarter of the total length of the peptidase, and is responsible for modulation of folding and activity of the pro-enzyme.


Pssm-ID: 460505  Cd Length: 73  Bit Score: 89.58  E-value: 3.36e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 61743916    27 LRINVRNGDEISKLSQLvnSNNLKLNFWKSPSSFNRPVDVLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNE 101
Cdd:pfam02244   1 YRVTPETEEQLQLLKEL--EESYDLDFWKPPSKVGKPVDVMVPPSKLEAFEELLEKHGISYEVLIEDVQELIDEE 73
 
Name Accession Description Interval E-value
M14_CPA cd03870
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup; Peptidase M14 ...
118-419 0e+00

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup; Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA4, detected in hormone-regulated tissues, is thought to play a role in prostate cancer.


Pssm-ID: 349442 [Multi-domain]  Cd Length: 301  Bit Score: 609.82  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 118 FNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGkGVRRPAVWLNAGIHSREWISQATAIWTARK 197
Cdd:cd03870   1 FNYAAYHTLEEIYFWMDNLVAEHPNLVSKLQIGSSFENRPMYVLKFSTG-GEERPAIWIDAGIHSREWVTQASAIWTAEK 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 198 IVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVY 277
Cdd:cd03870  80 IVSDYGKDPSITSILDTMDIFLEIVTNPDGYVFTHSSNRLWRKTRSVNPGSLCIGVDPNRNWDAGFGGPGASSNPCSETY 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 278 HGPHANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTCT 357
Cdd:cd03870 160 HGPHANSEVEVKSIVDFIQSHGNFKAFISIHSYSQLLMYPYGYTVEKAPDQEELDEVAKKAVKALASLHGTEYKVGSIST 239
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 61743916 358 TVYPASGSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHVRDN 419
Cdd:cd03870 240 TIYQASGSSIDWAYDNGIKYAFTFELRDTGRYGFLLPANQIIPTAEETWLALKTIMEHVRDH 301
M14_CP_A-B_like cd03860
Peptidase M14 carboxypeptidase subfamily A/B-like; The Peptidase M14 Carboxypeptidase (CP) A/B ...
123-416 2.02e-162

Peptidase M14 carboxypeptidase subfamily A/B-like; The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4 is detected in hormone-regulated tissues, and is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor, PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues.


Pssm-ID: 349433 [Multi-domain]  Cd Length: 300  Bit Score: 458.53  E-value: 2.02e-162
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVR-RPAVWLNAGIHSREWISQATAIWTARKIVSD 201
Cdd:cd03860   1 YHPLDDIVQWLDDLAAAFPDNVEIFTIGKSYEGRDITGIHIWGSGGKGgKPAIVIHGGQHAREWISTSTVEYLAHQLLSG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 202 YQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPH 281
Cdd:cd03860  81 YGSDATITALLDKFDFYIIPVVNPDGYVYTWTTDRLWRKNRQPTGGSSCVGIDLNRNWGYKWGGPGASTNPCSETYRGPS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 282 ANSEVEVKSVVDFIQKHG---NFKGFIDLHSYSQLLMYPYGYSV-KKAPDAEELDKVARLAAKALASVSGTEYQVGPTCT 357
Cdd:cd03860 161 AFSAPETKALADFINALAagqGIKGFIDLHSYSQLILYPYGYSCdAVPPDLENLMELALGAAKAIRAVHGTTYTVGPACS 240
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 358 TVYPASGSSIDWAYDNG-IKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHV 416
Cdd:cd03860 241 TLYPASGSSLDWAYDVAkIKYSYTIELRDTGTYGFLLPPEQILPTGEETWAGVKYLADFI 300
Peptidase_M14 pfam00246
Zinc carboxypeptidase;
129-408 1.49e-142

Zinc carboxypeptidase;


Pssm-ID: 459730 [Multi-domain]  Cd Length: 287  Bit Score: 407.84  E-value: 1.49e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916   129 IYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVR---RPAVWLNAGIHSREWISQATAIWTARKIVSDYQRD 205
Cdd:pfam00246   1 IEAWLDALAARYPDLVRLVSIGKSVEGRPLKVLKISSGPGEHnpgKPAVFIDGGIHAREWIGPATALYLIHQLLTNYGRD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916   206 PAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSE 285
Cdd:pfam00246  81 PEITELLDDTDIYILPVVNPDGYEYTHTTDRLWRKNRSNANGSSCIGVDLNRNFPDHWNEVGASSNPCSETYRGPAPFSE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916   286 VEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVK-KAPDAEELDKVARLAAKALAS-VSGTEYQVGPT-CTTVYPA 362
Cdd:pfam00246 161 PETRAVADFIRSKKPFVLYISLHSYSQVLLYPYGYTRDePPPDDEELKSLARAAAKALQKmVRGTSYTYGITnGATIYPA 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 61743916   363 SGSSIDWAYDN-GIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLG 408
Cdd:pfam00246 241 SGGSDDWAYGRlGIKYSYTIELRDTGRYGFLLPASQIIPTAEETWEA 287
Zn_pept smart00631
Zn_pept domain;
123-402 1.07e-135

Zn_pept domain;


Pssm-ID: 214748 [Multi-domain]  Cd Length: 277  Bit Score: 390.16  E-value: 1.07e-135
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916    123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSREWISQATAIWTARKIVSDY 202
Cdd:smart00631   1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISNGGSHDKPAIFIDAGIHAREWIGPATALYLINQLLENY 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916    203 QRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNpgSSCIGADPNRNWNASFAGkgaSDNPCSEVYHGPHA 282
Cdd:smart00631  81 GRDPRVTNLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPN--SNCRGVDLNRNFPFHWGE---TGNPCSETYAGPSP 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916    283 NSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVK-KAPDAEELDKVARLAAKALASVSGTEYQVGPTCTTVYP 361
Cdd:smart00631 156 FSEPETKAVRDFIRSNRRFKLYIDLHSYSQLILYPYGYTKNdLPPNVDDLDAVAKALAKALASVHGTRYTYGISNGAIYP 235
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 61743916    362 ASGSSIDWAYD-NGIKFAFTFELRDTGTYGFLLPANQIIPTA 402
Cdd:smart00631 236 ASGGSDDWAYGvLGIPFSFTLELRDDGRYGFLLPPSQIIPTG 277
M14_CPB cd03871
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B subgroup; Peptidase M14 ...
118-416 5.73e-133

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B subgroup; Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients. this subfamily also includes thrombin activatable fibrinolysis inhibitor (TAFIa), a carboxypeptidase that stabilizes fibrin clots by removing C-terminal arginines and lysines from partially degraded fibrin. Inhibition of TAFIa stimulates the degradation of fibrin clots and may help in prevention of thrombosis.


Pssm-ID: 349443 [Multi-domain]  Cd Length: 300  Bit Score: 384.11  E-value: 5.73e-133
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 118 FNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTgKGVRRPAVWLNAGIHSREWISQATAIWTARK 197
Cdd:cd03871   1 HSYEKYNNWETIEAWTEQVASKNPDLVSRSQIGTTFEGRPIYLLKVGK-PGSNKKAIFMDCGFHAREWISPAFCQWFVRE 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 198 IVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVY 277
Cdd:cd03871  80 AVRTYGKEKIMTKLLDRLDFYILPVLNIDGYVYTWTKNRMWRKTRSPNAGSSCIGTDPNRNFNAGWCTVGASSNPCSETY 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 278 HGPHANSEVEVKSVVDFIQKH-GNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTC 356
Cdd:cd03871 160 CGSAPESEKETKALANFIRNNlSSIKAYLTIHSYSQMLLYPYSYTYKLAPNHEELNSIAKGAVKELSSLYGTKYTYGPGA 239
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 357 TTVYPASGSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHV 416
Cdd:cd03871 240 TTIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFLLPESQIKPTCEETMLAVKYIANYV 299
M14_CPB2 cd06246
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B2 subgroup; Peptidase M14 ...
120-416 9.35e-114

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B2 subgroup; Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity while low TAFI levels have been correlated with chronic liver disease.


Pssm-ID: 349465 [Multi-domain]  Cd Length: 300  Bit Score: 335.24  E-value: 9.35e-114
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 120 YGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd06246   2 YEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWIDCGIHAREWISPAFCLWFIGHAS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 200 SDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHG 279
Cdd:cd06246  82 YFYGIIGQHTNLLNLVDFYVMPVVNVDGYDYSWKKNRMWRKNRSKHANNRCIGTDLNRNFDAGWCGKGASSDSCSETYCG 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 280 PHANSEVEVKSVVDFIQKH-GNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTCTT 358
Cdd:cd06246 162 PYPESEPEVKAVASFLRRHkDTIKAYISMHSYSQMVLFPYSYTRNKSKDHDELSLLAKEAVTAIRKTSRNRYTYGPGAET 241
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 61743916 359 VYPASGSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHV 416
Cdd:cd06246 242 IYLAPGGSDDWAYDLGIKYSFTFELRDRGTYGFLLPPSYIKPTCNEALLAVKKIALHV 299
M14_CPO cd06247
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase O subgroup; Peptidase M14 ...
120-416 1.14e-105

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase O subgroup; Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.


Pssm-ID: 349466 [Multi-domain]  Cd Length: 298  Bit Score: 314.48  E-value: 1.14e-105
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 120 YGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd06247   1 YTKYHPMDEIYQWMDQMQEKNSEVVSQHYLGQTYEKRPMYYLKIGWPSDKPKKIIWMDCGIHAREWIAPAFCQWFVKEIL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 200 SDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHG 279
Cdd:cd06247  81 QNYKTDSRLNKLLKNLDFYVLPVLNIDGYIYSWTTDRLWRKSRSPHNNGTCYGTDLNRNFNSQWCSIGASRNCCSIIFCG 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 280 PHANSEVEVKSVVDFIQKHGN-FKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTCTT 358
Cdd:cd06247 161 TGPESEPETKAVADLIEKKKSdILCYLTIHSYGQLILLPYGYTKEPSPNHEEMMEVGEKAAAALKEKHGTSYRVGSSADI 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 61743916 359 VYPASGSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHV 416
Cdd:cd06247 241 LYSNSGSSRDWARDIGIPFSYTFELRDTGTYGFVLPEDQIQPTCEETMEAVMSIIEYV 298
M14_CPA6 cd03872
Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A6 subgroup; ...
123-416 9.14e-99

Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A6 subgroup; Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expressed. It is also broadly expressed in embryonic tissue, being found in neuronal tissues, bone, skin as well as the lateral rectus eye muscle. A disruption in the CPA6 gene is linked to Duane syndrome, a defect in the abducens nerve/lateral rectus muscle connection.


Pssm-ID: 349444 [Multi-domain]  Cd Length: 300  Bit Score: 296.89  E-value: 9.14e-99
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSREWISQATAIWTARKIVSDY 202
Cdd:cd03872   2 YHSLEEIESWMFYMNKTHSDLVHMFSIGKSYEGRSLYVLKLGKRSRSYKKAVWIDCGIHAREWIGPAFCQWFVKEAINSY 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 203 QRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHA 282
Cdd:cd03872  82 QTDPAMKKMLNQLYFYVMPVFNVDGYHYSWTNDRFWRKTRSKNSRFQCRGVDANRNWKVKWCDEGASLHPCDDTYCGPFP 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 283 NSEVEVKSVVDFIQKH-GNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTCTTVYP 361
Cdd:cd03872 162 ESEPEVKAVAQFLRKHrKHVRAYLSFHAYAQMLLYPYSYKYATIPNFGCVESAAHNAVNALQSAYGVRYRYGPASSTLYV 241
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 61743916 362 ASGSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHV 416
Cdd:cd03872 242 SSGSSMDWAYKNGIPYAFAFELRDTGYFGFLLPEGLIKPTCTETMLAVKNITMHL 296
M14_CPT cd03859
Peptidase M14 Carboxypeptidase T subfamily; Peptidase M14-like domain of carboxypeptidase (CP) ...
121-409 8.86e-89

Peptidase M14 Carboxypeptidase T subfamily; Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.


Pssm-ID: 349432 [Multi-domain]  Cd Length: 292  Bit Score: 271.05  E-value: 8.86e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 121 GAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVR--RPAVWLNAGIHSREWISQATAIWTARKI 198
Cdd:cd03859   2 GGYHTYAELVAELDQLAAEYPEITKLISIGKSVEGRPIWAVKISDNPDEDedEPEVLFMGLHHAREWISLEVALYFADYL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 199 VSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQ--NRLWRKTRSRNPGSSC--IGADPNRNWNASFAG--KGASDNP 272
Cdd:cd03859  82 LENYGTDPRITNLVDNREIWIIPVVNPDGYEYNRETggGRLWRKNRRPNNGNNPgsDGVDLNRNYGYHWGGdnGGSSPDP 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 273 CSEVYHGPHANSEVEVKSVVDFIQKHgNFKGFIDLHSYSQLLMYPYGYSVK-KAPDAEELDKVARlaakALASVSGTEYq 351
Cdd:cd03859 162 SSETYRGPAPFSEPETQAIRDLVESH-DFKVAISYHSYGELVLYPWGYTSDaPTPDEDVFEELAE----EMASYNGGGY- 235
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 352 vGPTCTTV-YPASGSSIDWAY-DNGIkFAFTFELRdTGTYGFLLPANQIIPTAEETWLGL 409
Cdd:cd03859 236 -TPQQSSDlYPTNGDTDDWMYgEKGI-IAFTPELG-PEFYPFYPPPSQIDPLAEENLPAA 292
M14_CP_insect cd06248
Peptidase M14 carboxypeptidase subfamily A/B-like; This family includes peptidase M14 ...
123-411 1.50e-75

Peptidase M14 carboxypeptidase subfamily A/B-like; This family includes peptidase M14 carboxypeptidases found specifically in insects, including B-type carboxypeptidase of H. zea (CPBHz, insect gut carboxypeptidase-3) that is insensitive to potato carboxypeptidase inhibitor (PCI) in corn earworm, and midgut procarboxypeptidase A (PCPAHa, insect gut carboxypeptidase-1) from Helicoverpa armigera larva, a devastating pest of crops. PCPAHa preferentially cleaves aliphatic and aromatic residues. The peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4 is detected in hormone-regulated tissues, and is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor, PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues.


Pssm-ID: 349467 [Multi-domain]  Cd Length: 297  Bit Score: 237.36  E-value: 1.50e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGK--GVRRPAVWLNAGIHSREWISQATAIWTARKIVS 200
Cdd:cd06248   1 YHSLDEIDEYLDGLAEESPDVVTVVEGGYTFEGRPIKYVRIRSTNseDTSKPTIMIEGGINPREWISPPAALYAIHKLVE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 201 DyqrDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRN---PGSSCIGADPNRNWNASFAGKGASDNPCSEVY 277
Cdd:cd06248  81 D---VETQSDLLNNFDWIILPVANPDGYVFTHTNDREWTKNRSTNsnpLGQICFGVNINRNFDYQWNPVLSSESPCSELY 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 278 HGPHANSEVEVKSVVDFIQKHGN-FKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTC 356
Cdd:cd06248 158 AGPSAFSEAESRAIRDILHEHGNrIHLYISFHSGGSFILYPWGYDGSTSSNARQLHLAGVAAAAAISSNNGRPYVVGQSS 237
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 61743916 357 TTVYPASGSSIDWAYDNGiKFAFTFELRD-TGTYGFLLPANQIIPTAEETWLGLKT 411
Cdd:cd06248 238 VLLYRAAGTSSDYAMGIA-GIDYTYELPGySSGDPFYVPPAYIEQVVREAWEGIVV 292
Peptidase_M14_like cd00596
M14 family of metallocarboxypeptidases and related proteins; The M14 family of ...
174-409 2.65e-50

M14 family of metallocarboxypeptidases and related proteins; The M14 family of metallocarboxypeptidases (MCPs), also known as funnelins, are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349427 [Multi-domain]  Cd Length: 216  Bit Score: 169.18  E-value: 2.65e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 174 VWLNAGIHSREWISQATAIWTARKIVSDYQRDPaITSILEKMDIFLLPVANPDGYVYTQTqnRLWRKTRSrnpgssciGA 253
Cdd:cd00596   1 ILITGGIHGNEVIGVELALALIEYLLENYGNDP-LKRLLDNVELWIVPLVNPDGFARVID--SGGRKNAN--------GV 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 254 DPNRNWNASFaGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHgNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDK 333
Cdd:cd00596  70 DLNRNFPYNW-GKDGTSGPSSPTYRGPAPFSEPETQALRDLAKSH-RFDLAVSYHSSSEAILYPYGYTNEPPPDFSEFQE 147
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 61743916 334 VARlaakALASVSGTEYQVGPTCTTVYPASGSSIDWAYDNGIKFAFTFELrdtGTYGFLLPANQIIPTAEETWLGL 409
Cdd:cd00596 148 LAA----GLARALGAGEYGYGYSYTWYSTTGTADDWLYGELGILAFTVEL---GTADYPLPGTLLDRRLERNLAAL 216
M14-like cd06228
Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup ...
172-382 1.12e-47

Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349447  Cd Length: 294  Bit Score: 164.87  E-value: 1.12e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 172 PAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAIT------------SILEKMDIFLLPVANPDGYVYTQTQNRLWR 239
Cdd:cd06228   1 PGVYFIGGVHAREWGSPDILIYFAADLLEAYTNNTGLTyggktftaaqvkSILENVDLVVFPLVNPDGRWYSQTSESMWR 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 240 KTRSRNPGS---SCIGADPNRN----WNA----SFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHGNFKGFIDLH 308
Cdd:cd06228  81 KNRNPASAGdggSCIGVDINRNfdflWDFpryfDPGRVPASTSPCSETYHGPSAFSEPETRNVVWLFDAYPNIRWFVDVH 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 309 SYSQLLMYPYG-----------------YSVK-------------KAPDAEELDKVARLAAKALASVSGTEYQVGPTCTT 358
Cdd:cd06228 161 SASELILYSWGddenqstdpamnflnpaYDGKrgiagdtryrefiPSDDRTIAVNLANRMALAIAAVRGRVYTVQQAFGL 240
                       250       260       270
                ....*....|....*....|....*....|.
gi 61743916 359 vYPASGSSIDWAYD----NGIK---FAFTFE 382
Cdd:cd06228 241 -YPTSGASDDYAYSrhfvNPAKrkvYGFTIE 270
M14_CPT_like cd06226
Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT) ...
158-400 2.16e-44

Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT)-like proteins; Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.


Pssm-ID: 349445 [Multi-domain]  Cd Length: 267  Bit Score: 155.30  E-value: 2.16e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 158 MYVLKFS---TGKGVRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGyVYTQTQ 234
Cdd:cd06226   2 IRALKLTnkqATPPGEKPKFFMMAAIHAREYTTAELVARFAEDLVAGYGTDADATWLLDYTELHLVPQVNPDG-RKIAET 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 235 NRLWRKTRSRNPGSSCI---GADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFI------QKHGNF---- 301
Cdd:cd06226  81 GLLWRKNTNTTPCPASSptyGVDLNRNSSFKWGGAGAGGSACSETYRGPSAASEPETQAIENYVkqlfpdQRGPGLtdpa 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 302 ----KG-FIDLHSYSQLLMYPYGYSVKKAPDAEELdkvARLAAKaLASVSGteYQVGPTcTTVYPASGSSIDWAYDN-GI 375
Cdd:cd06226 161 pddtSGiYIDIHSYGNLVLYPWGWTGTPAPNAAGL---RTLGRK-FAYFNG--YTPQQA-VALYPTDGTTDDFAYGTlGV 233
                       250       260
                ....*....|....*....|....*...
gi 61743916 376 KfAFTFELrdtGTYGFLLPA---NQIIP 400
Cdd:cd06226 234 A-AYTFEL---GTAFFESCSyfeNTILP 257
M14-CPA-like cd06227
Peptidase M14 carboxypeptidase A-like domain; uncharacterized subfamily; A functionally ...
171-383 3.08e-37

Peptidase M14 carboxypeptidase A-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349446 [Multi-domain]  Cd Length: 224  Bit Score: 135.09  E-value: 3.08e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 171 RPAVWLNAGIHSREWISQATAIWTARKIVSDYQ------RDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTrSR 244
Cdd:cd06227   1 KPRVLLVFGEHARELISVESALRLLRQLCGGLQepaasaLRELAREILDNVELKIIPNANPDGRRLVESGDYCWRGN-EN 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 245 npgssciGADPNRNWNASFaGKGASDNPcSEVYHGPHANSEVEVKSVVDFIQKHgNFKGFIDLHSYSQLLMYPYGYSVKK 324
Cdd:cd06227  80 -------GVDLNRNWGVDW-GKGEKGAP-SEEYPGPKPFSEPETRALRDLALSF-KPHAFVSVHSGMLAIYTPYAYSASV 149
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 61743916 325 APDAEELDKVARLAAKALAsvSGTEYQVGPTCTTV-YPASGSSIDWAYDN-GIKFAFTFEL 383
Cdd:cd06227 150 PRPNRAADMDDLLDVVAKA--SCGDCTVGSAGKLVgYLADGTAMDYMYGKlKVPYSFTFEI 208
MpaA COG2866
Murein tripeptide amidase MpaA [Cell wall/membrane/envelope biogenesis];
119-321 2.10e-33

Murein tripeptide amidase MpaA [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442113 [Multi-domain]  Cd Length: 337  Bit Score: 127.88  E-value: 2.10e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 119 NYGAYHSLEAIYHEMDNIAADfPDLARRVKIGHSFENRPMYVLKFSTGKGvRRPAVWLNAGIHSREWISQATAIWTARKI 198
Cdd:COG2866  15 SYDRYYTYEELLALLAKLAAA-SPLVELESIGKSVEGRPIYLLKIGDPAE-GKPKVLLNAQQHGNEWTGTEALLGLLEDL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 199 VSDYqrDPAITSILEKMDIFLLPVANPDGYVytqtqnRLWRKTRsrnpgsscIGADPNRNWNASFAgkgasdnpcsevyh 278
Cdd:COG2866  93 LDNY--DPLIRALLDNVTLYIVPMLNPDGAE------RNTRTNA--------NGVDLNRDWPAPWL-------------- 142
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 61743916 279 gphanSEVEVKSVVDFIQKHgNFKGFIDLHSYSQLLMYPYGYS 321
Cdd:COG2866 143 -----SEPETRALRDLLDEH-DPDFVLDLHGQGELFYWFVGTT 179
M14-like cd06905
Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup ...
123-383 6.14e-33

Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349476 [Multi-domain]  Cd Length: 359  Bit Score: 126.96  E-value: 6.14e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVL---KFSTGKGVRRPAVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd06905   6 YYTYAELTARLKALAEAYPNLVRLESIGKSYEGRDIWLLtitNGETGPADEKPALWVDGNIHGNEVTGSEVALYLAEYLL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 200 SDYQRDPAITSILEKMDIFLLPVANPDGY--VYTQTQNRLW--------------------------------------- 238
Cdd:cd06905  86 TNYGKDPEITRLLDTRTFYILPRLNPDGAeaYKLKTERSGRssprdddrdgdgdedgpedlngdglitqmrvkdptgtwk 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 239 ------RKTRSRNPGSSCI----------------------GADPNRN----WNASFAGKGAsdnpcsevyhGPHANSEV 286
Cdd:cd06905 166 vdpddpRLMVDREKGEKGFyrlypegidndgdgrynedgpgGVDLNRNfpynWQPFYVQPGA----------GPYPLSEP 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 287 EVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKAlasVSGTEYQVGP---TCTTVY--P 361
Cdd:cd06905 236 ETRAVADFLLAHPNIAAVLTFHTSGGMILRPPGTGPDSDMPPADRRVYDAIGKKG---VELTGYPVSSvykDFYTVPggP 312
                       330       340
                ....*....|....*....|...
gi 61743916 362 ASGSSIDWAYDN-GIkFAFTFEL 383
Cdd:cd06905 313 LDGDFFDWAYFHlGI-PSFSTEL 334
Propep_M14 pfam02244
Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic ...
27-101 3.36e-22

Carboxypeptidase activation peptide; Carboxypeptidases are found in abundance in pancreatic secretions. The pro-segment moiety (activation peptide) accounts for up to a quarter of the total length of the peptidase, and is responsible for modulation of folding and activity of the pro-enzyme.


Pssm-ID: 460505  Cd Length: 73  Bit Score: 89.58  E-value: 3.36e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 61743916    27 LRINVRNGDEISKLSQLvnSNNLKLNFWKSPSSFNRPVDVLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNE 101
Cdd:pfam02244   1 YRVTPETEEQLQLLKEL--EESYDLDFWKPPSKVGKPVDVMVPPSKLEAFEELLEKHGISYEVLIEDVQELIDEE 73
M14_CP_plant cd18172
Zinc carboxypeptidase, including SOL1, a carboxypeptidase D in plant; This family includes ...
123-386 9.17e-21

Zinc carboxypeptidase, including SOL1, a carboxypeptidase D in plant; This family includes only plant members of the carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). It includes Arabidopsis thaliana SOL1 carboxypeptidase D which is known to possess enzymatic activity to remove the C-terminal arginine residue of CLE19 proprotein in vitro, and SOL1-dependent cleavage of the C-terminal arginine residue is necessary for CLE19 activity in vivo. The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation.


Pssm-ID: 349482 [Multi-domain]  Cd Length: 276  Bit Score: 91.32  E-value: 9.17e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVR--RPAVWLNAGIHSREWISQATAIWTARKIVS 200
Cdd:cd18172   1 YHSNAELEDALKAFTRRCGAISRLIVIGSSVNGFPLWALEISDGPGEDetEPAFKFVGNMHGDEPVGRELLLRLADWLCA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 201 DYQR-DPAITSILEKMDIFLLPVANPDGYVytqtqnrlwRKTRSrNPGssciGADPNRNWNASFAGKGASDNpcsevyhg 279
Cdd:cd18172  81 NYKAkDPLAAKIVENAHLHLVPTMNPDGFA---------RRRRN-NAN----NVDLNRDFPDQFFPKNLRND-------- 138
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 280 pHANSEVEVKSVVDFIQKHgNFKGFIDLHSYSQLLMYPY--------GYSvkKAPDAEELDKVARLAAKALASVS-GTEY 350
Cdd:cd18172 139 -LAARQPETLAVMNWSRSV-RFTASANLHEGALVANYPWdgnadgrtKYS--ASPDDATFRRLASVYAQAHPNMAkSKEF 214
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 61743916 351 QVGPT-CTTVYPASGSSIDWAYDNGIKFAFTFELRDT 386
Cdd:cd18172 215 PGGITnGAQWYPLYGGMQDWNYLHTGCMDLTLEVNDN 251
M14_CP_bacteria cd18173
bacterial peptidase M14 carboxypeptidase, uncharacterized; This family contains only bacterial ...
122-375 1.71e-20

bacterial peptidase M14 carboxypeptidase, uncharacterized; This family contains only bacterial carboxypeptidase (CP) members of the M14 family of metallocarboxypeptidases (MCPs), mostly of which have yet to be characterized. The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation.


Pssm-ID: 349483 [Multi-domain]  Cd Length: 281  Bit Score: 90.72  E-value: 1.71e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 122 AYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVR--RPAVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd18173   3 SYPTYEEYEAMMQSFAANYPNICRLVSIGTSVQGRKLLALKISDNVNTEeaEPEFKYTSTMHGDETTGYELMLRLIDYLL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 200 SDYQRDPAITSILEKMDIFLLPVANPDGYvYTQTQNRLWRKTRSrNPgsscIGADPNRNwnasFAGKGASDNPcsevyhg 279
Cdd:cd18173  83 TNYGTDPRITNLVDNTEIWINPLANPDGT-YAGGNNTVSGATRY-NA----NGVDLNRN----FPDPVDGDHP------- 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 280 PHANSEVEVKSVVDFIQKHgNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARlaakalasvsgtEYqvGPTCTTV 359
Cdd:cd18173 146 DGNGWQPETQAMMNFADEH-NFVLSANFHGGAEVVNYPWDTWYSRHPDDDWFQDISR------------EY--ADTNQAN 210
                       250
                ....*....|....*.
gi 61743916 360 YPASGSSidwAYDNGI 375
Cdd:cd18173 211 SPPMYMS---EFNNGI 223
M14_CP_N-E_like cd03858
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase (CP) N/E-like subfamily of ...
123-383 1.10e-18

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation.


Pssm-ID: 349431 [Multi-domain]  Cd Length: 292  Bit Score: 85.78  E-value: 1.10e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRR---PAVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd03858   1 HHNYEELEEFLKQVAKRYPNITRLYSIGKSVEGRELWVLEISDNPGVHEpgePEFKYVANMHGNEVVGRELLLLLAEYLC 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 200 SDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWrkTRSRNPGSsciGADPNRNWNASFAGkgasdnpcsevYHG 279
Cdd:cd03858  81 ENYGKDPRVTQLVNSTRIHIMPSMNPDGYEKAQEGDCGG--LIGRNNAN---GVDLNRNFPDQFFQ-----------VYS 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 280 PHANSEVEVKSVVDFIQKHgnfkGFI---DLHSYSQLLMYPYGYS-------VKKAPDaeelDKVARLAAKALASVSGTE 349
Cdd:cd03858 145 DNNPRQPETKAVMNWLESI----PFVlsaNLHGGALVANYPYDDTrsgksteYSPSPD----DAVFRMLARSYSDAHPTM 216
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 61743916 350 YQVGPTCTTV--------------YPASGSSIDWAYDNGIKFAFTFEL 383
Cdd:cd03858 217 SMGKPCCCDDdenfpngitngaawYSVSGGMQDFNYLHTNCFEITLEL 264
M14_Endopeptidase_I cd06229
Peptidase M14 carboxypeptidase family-like domain of Endopeptidase I; Peptidase M14-like ...
174-383 1.16e-17

Peptidase M14 carboxypeptidase family-like domain of Endopeptidase I; Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs), and is classified as belonging to subfamily C. However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1 has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide. ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.


Pssm-ID: 349448 [Multi-domain]  Cd Length: 238  Bit Score: 81.62  E-value: 1.16e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 174 VWLNAGIHSREWISQATAIwtarKIVSDY---------QRDPAITSILEKMDIFLLPVANPDGYVYTQ----TQNRLWRK 240
Cdd:cd06229   1 VLYNASFHAREYITTLLLM----KFIEDYakayvnksyIRGKDVGELLNKVTLHIVPMVNPDGVEISQngsnAINPYYLR 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 241 TRSRNPGSSCI--------GADPNRNWNASFaGKGASDN---PCSEVYHGPHANSEVEVKSVVDFIQKHgNFKGFIDLHS 309
Cdd:cd06229  77 LVAWNKKGTDFtgwkanirGVDLNRNFPAGW-EKEKRLGpkaPGPRDYPGKEPLSEPETKAMAALTRQN-DFDLVLAYHS 154
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 61743916 310 ySQLLMYpYGYSVKKAPDAEELdkvarlaAKALASVSGTEYqVGPTCTtvyPASGSSIDWAYDNGIKFAFTFEL 383
Cdd:cd06229 155 -QGEEIY-WGYNGLEPEESKAM-------AEKFASVSGYEP-VEAEAI---DSYGGFKDWFIYEFKKPSFTIET 215
M14_CPD_I cd03868
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup; The ...
120-383 2.78e-17

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup; The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. This Domain I family contains two contiguous surface cysteines that may become palmitoylated and target the enzyme to membranes, thus regulating intracellular trafficking. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down-regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. In D. melanogaster, the CPD variant 1B short (DmCPD1Bs) is necessary and sufficient for viability of the fruit fly.


Pssm-ID: 349440  Cd Length: 294  Bit Score: 81.91  E-value: 2.78e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 120 YGAYHSLEAIYHEMdniAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVR---RPAVWLNAGIHSREWISQATAIWTAR 196
Cdd:cd03868   1 YHNYDELTDLLHKL---AETYPNIAKLHSIGKSVQGRELWVLEISDNVNRRepgKPMFKYVANMHGDETVGRQLLIYLAQ 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 197 KIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQ------TQNRLWRKTRSrnpgssciGADPNRNWNASFAGKGasd 270
Cdd:cd03868  78 YLLENYGKDERVTRLVNSTDIHLMPSMNPDGFENSKegdcsgDPGYGGRENAN--------NVDLNRNFPDQFEDSD--- 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 271 npcsevyHGPHANSEVEVKSVVDFIQKhGNFKGFIDLHSYSQLLMYPY----------GYSvkKAPDaeelDKVARLAAK 340
Cdd:cd03868 147 -------DRLLEGRQPETLAMMKWIVE-NPFVLSANLHGGSVVASYPFddspshiecgVYS--KSPD----DAVFRHLAH 212
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 61743916 341 ALASvSGTEYQVGPTCTTV------------YPASGSSIDWAYDNGIKFAFTFEL 383
Cdd:cd03868 213 TYAD-NHPTMHKGNNCCEDsfkdgitngaewYDVPGGMQDFNYVHSNCFEITLEL 266
M14_CPD_II cd03863
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup; The ...
133-383 6.04e-11

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup; The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop.


Pssm-ID: 349435 [Multi-domain]  Cd Length: 296  Bit Score: 63.04  E-value: 6.04e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 133 MDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRR---PAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAIT 209
Cdd:cd03863  18 LRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGVHEpgePEFKYIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVT 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 210 SILEKMDIFLLPVANPDGYVYTQTQNRLwrKTRSRNPGSScigADPNRNWNASFagKGASDNPcsevyhgphansEVEVK 289
Cdd:cd03863  98 DLVQNTRIHIMPSMNPDGYEKSQEGDRG--GTVGRNNSNN---YDLNRNFPDQF--FQITDPP------------QPETL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 290 SVVDFIQKHgNFKGFIDLHSYSQLLMYPY--------GYSvkKAPDaeelDKVARLAAKALASVSGTEYQvGPTCTTVYP 361
Cdd:cd03863 159 AVMSWLKTY-PFVLSANLHGGSLVVNYPFdddeqglaTYS--KSPD----DAVFQQLALSYSKENSKMYQ-GSPCKELYP 230
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 61743916 362 ----------------ASGSSIDWAYDNGIKFAFTFEL 383
Cdd:cd03863 231 neyfphgitngaqwynVPGGMQDWNYLNTNCFEVTIEL 268
M14_CPD_III cd06245
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup; ...
123-380 1.10e-09

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup; The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop.


Pssm-ID: 349464 [Multi-domain]  Cd Length: 283  Bit Score: 59.00  E-value: 1.10e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRP---AVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd06245   1 YHSYKQLSKFLRGLNSNYPTITNLTSLGQSVEKRDIWVLEIGNKPNESEPsepKILFVGGIHGNAPVGTELLLLLAHFLC 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 200 SDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQnrlwrktrsRNPGSSCIGADPNRNWNASFAGKgasdnpcsevYHG 279
Cdd:cd06245  81 HNYKKDSAITKLLNRTRIHIVPSLNPDGAEKAEEK---------KCTSKIGEKNANGVDLDTDFESN----------ANN 141
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 280 PHANSEVEVKSVVDFIQKHgNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAkalasVSGTEYQVG-PTCTT 358
Cdd:cd06245 142 RSGAAQPETKAIMDWLKEK-DFTLSVALDGGSLVVTYPYDKPVQTVENKETLKHLAKVYA-----NNHPTMHAGdPGCCS 215
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 61743916 359 ---------VYPAS------GSSIDWAYDNGIKFAFT 380
Cdd:cd06245 216 nsdenftngVIRASewhshkGSMLDFSYKFGSCPEIT 252
M14_CPZ cd03867
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup; Peptidase ...
123-228 1.52e-09

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup; Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.


Pssm-ID: 349439  Cd Length: 315  Bit Score: 58.74  E-value: 1.52e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKG---VRRPAVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd03867   1 HHSYSQMVRVLKKTAARCAHIARTYSIGRSFEGKDLLVIEFSSNPGqheLLEPEVKYIGNMHGNEVVGREMLIYLAQYLC 80
                        90       100       110
                ....*....|....*....|....*....|
gi 61743916 200 SDY-QRDPAITSILEKMDIFLLPVANPDGY 228
Cdd:cd03867  81 SEYlLGNPRIQTLINTTRIHLLPSMNPDGY 110
M14_CPM cd03866
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup; Peptidase M14 ...
123-383 2.22e-09

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup; Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the control of peptide hormones and growth factor activity on the cell surface and in the membrane-localized degradation of extracellular proteins, for example it hydrolyses the C-terminal arginine of epidermal growth factor (EGF) resulting in des-Arg-EGF which binds to the EGF receptor (EGFR) with an equal or greater affinity than native EGF. CPM is a required processing enzyme that generates specific agonists for the B1 receptor.


Pssm-ID: 349438  Cd Length: 289  Bit Score: 58.27  E-value: 2.22e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVL---KFSTGKGVRRPAVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd03866   1 YHNQEQMETYLKDVNKNYPSITHLHSIGKSVEGRDLWVLvlgRFPTKHRIGIPEFKYVANMHGDEVVGRELLLHLIEFLV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 200 SDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTR-SRNpgssciGADPNRNWNASFAGKGASDNPcsevyh 278
Cdd:cd03866  81 TSYGSDPVITRLINSTRIHIMPSMNPDGFEATKKPDCYYTKGRyNKN------GYDLNRNFPDAFEENNVQRQP------ 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 279 gphansevEVKSVVDFIqKHGNFKGFIDLHSYSQLLMYPY--GYSV-------KKAPDaeelDKVARLAAKALASVSGTE 349
Cdd:cd03866 149 --------ETRAVMDWI-KNETFVLSANLHGGALVASYPFdnGNSGtgqlgyySVSPD----DDVFIYLAKTYSYNHTNM 215
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 61743916 350 YQvGPTCTTV-------------YPASGSSIDWAYDNGIKFAFTFEL 383
Cdd:cd03866 216 YK-GIECSNSqsfpggitngyqwYPLQGGMQDYNYVWGQCFEITLEL 261
M14_MpaA-like cd06904
Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A and related proteins; ...
146-383 1.15e-08

Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A and related proteins; Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.


Pssm-ID: 349475 [Multi-domain]  Cd Length: 214  Bit Score: 54.97  E-value: 1.15e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 146 RVKIGHSFENRPMYVLKFSTGKgvrRPAVWLNAGIHSREWisqaTAIWTARKIVSDYQRDPAITSILekmdIFLLPVANP 225
Cdd:cd06904   1 EKVYGTSVKGRPILAYKFGPGS---RARILIIGGIHGDEP----EGVSLVEHLLRWLKNHPASGDFH----IVVVPCLNP 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 226 DGYVytqtqnrlwRKTR-SRNpgssciGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHgNFKGF 304
Cdd:cd06904  70 DGLA---------AGTRtNAN------GVDLNRNFPTKNWEPDARKPKDPRYYPGPKPASEPETRALVELIERF-KPDRI 133
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 305 IDLHSYSQLLMYPYGYSvkkapdaeeldkvarLAAKALASVSGTEYQVGPTCTtvyPASGSSidWA-YDNGIkFAFTFEL 383
Cdd:cd06904 134 ISLHAPYLVNYDGPAKS---------------LLAEKLAQATGYPVVGDVGYT---PGSLGT--YAgIERNI-PVITLEL 192
M14_CPN cd03864
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup; Peptidase M14 ...
123-321 3.54e-08

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup; Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates include peptides found in the bloodstream, such as kinins (e.g. bradykinin, kalinin, met-lys-bradykinin), complement anaphylatoxins and creatine kinase MM (CK-MM). By removing just one amino acid, CPN can alter peptide activity and receptor binding. For example Bradykinin, a nine-residue peptide released from kiningen in response to tissue injury which is inactivated by CPN, anaphylatoxins which are regulated by CPN by the cleaving and removal of their C-terminal arginines resulting in a reduction in their biological activities of 10-100-fold, and creatine kinase MM, a cytosolic enzyme that catalyzes the reversible transfer of a phosphate group from ATP to creatine, and is regulated by CPN by the cleavage of C-terminal lysines. Like the other N/E subfamily members, two surface loops surrounding the active-site groove restrict access to the catalytic center, thus restricting larger protein carboxypeptidase inhibitors from inhibiting CPN.


Pssm-ID: 349436 [Multi-domain]  Cd Length: 313  Bit Score: 54.55  E-value: 3.54e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVR---RPAVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd03864   1 HHRYDDLVRALYAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPGIHeplEPEFKYVGNMHGNEVLGRELLIQLSEFLC 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 200 SDYQR-DPAITSILEKMDIFLLPVANPDGYVYTQTQNrlwrktrSRNPG-----SSCIGADPNRNW---NA--SFAGKGA 268
Cdd:cd03864  81 EEYRNgNERITRLIQDTRIHILPSMNPDGYEVAARQG-------PEFNGylvgrNNANGVDLNRNFpdlNTlmYYNEKYG 153
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 61743916 269 SDNpcsevYHGP-----HANSEVEVKSVVDFIQKHgNFKGFIDLHSYSQLLMYPYGYS 321
Cdd:cd03864 154 GPN-----HHLPlpdnwKSQVEPETLAVIQWMQNY-NFVLSANLHGGAVVANYPYDKS 205
M14_CPX_like cd03869
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup; Peptidase ...
123-318 2.65e-07

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup; Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Proteins in this subgroup also contain an N-terminal discoidin domain. The CP domain is important for the function of AEBP1 as a transcriptional repressor. AEBP1 is involved in several biological processes including adipogenesis, macrophage cholesterol homeostasis, and inflammation. In macrophages, AEBP1 promotes the expression of IL-6, TNF-alpha, MCP-1, and iNOS whose expression is tightly regulated by NF-kappaB activity. ACLP, a secreted protein that associates with the extracellular matrix, is essential for abdominal wall development and contributes to dermal wound healing.


Pssm-ID: 349441  Cd Length: 322  Bit Score: 52.14  E-value: 2.65e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKG---VRRPAVWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd03869   1 HHNYKDMRQLMKVVNEMCPNITRIYNIGKSYQGLKLYAMEISDNPGeheVGEPEFRYVAGAHGNEVLGRELLLLLMQFLC 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 200 SDYQR-DPAITSILEKMDIFLLPVANPDGY-VYTQTQNRL--WRKTRSRNPGSSCIGADPNRN---WNASFAGKGASDN- 271
Cdd:cd03869  81 QEYLAgNPRIRHLVEETRIHLLPSVNPDGYeKAYEAGSELggWSLGRWTSDGIDINHNFPDLNsllWEAEDRKWVPRKVp 160
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 61743916 272 ----PCSEVYHGPHANSEVEVKSVVDFIQK-----HGNfkgfidLHSYSQLLMYPY 318
Cdd:cd03869 161 nhhiPIPEWYLSENATVAPETRAVIAWMEKipfvlGGN------LQGGELVVSYPY 210
M14-like cd03862
Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup ...
172-337 7.92e-07

Peptidase M14-like domain; uncharacterized subfamily; A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349434  Cd Length: 245  Bit Score: 50.12  E-value: 7.92e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 172 PAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGyvytqtqnrLWRKTRSrNPGssci 251
Cdd:cd03862   1 PVVGLVGGVHGLERIGTQVILAFLRSLLARLKWDKLLQELLEEVRLVVIPIVNPGG---------MALKTRS-NPN---- 66
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 252 GADPNRN------WNASFAGKGASDNPCSEVYHGpHANSEVEVKSVVDFIQKHGNFKGFI---DLHS---YSQLLMYPYG 319
Cdd:cd03862  67 GVDLMRNapveavEKVPFLVGGQRISPHLPWYRG-RNGLETESQALIRYVNEHLLESKMSislDCHSgfgLVDRIWFPYA 145
                       170
                ....*....|....*...
gi 61743916 320 YSVKKAPDAEELDKVARL 337
Cdd:cd03862 146 HTTEPFPNLAEIFALIQL 163
M14_CPE cd03865
Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase E subgroup; Peptidase M14 ...
123-259 1.88e-06

Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase E subgroup; Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine peptides that result in obesity and hyperglycemia. Reduced CPE enzyme and receptor activity could underlie abnormal placental phenotypes from the observation that CPE is down-regulated in enlarged placentas of interspecific hybrid (interspecies hybrid placental dysplasia, IHPD) and cloned mice.


Pssm-ID: 349437 [Multi-domain]  Cd Length: 319  Bit Score: 49.60  E-value: 1.88e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 123 YHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPA---VWLNAGIHSREWISQATAIWTARKIV 199
Cdd:cd03865   1 YHRYPELREALVSVWLQCPAISRIYTVGRSFEGRELLVIEVSDNPGEHEPGepeFKYVGNMHGNEAVGRELLIFLAQYLC 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 61743916 200 SDYQR-DPAITSILEKMDIFLLPVANPDGY-VYTQTQNRL--WRKTRsrnpgSSCIGADPNRNW 259
Cdd:cd03865  81 NEYQKgNETIINLIHSTRIHIMPSLNPDGFeKAASQPGELkdWFVGR-----SNAQGIDLNRNF 139
M14-like cd06240
Peptidase M14-like domain; uncharacterized subgroup; Peptidase M14-like domain of a ...
171-259 2.81e-06

Peptidase M14-like domain; uncharacterized subgroup; Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349459  Cd Length: 212  Bit Score: 48.04  E-value: 2.81e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 171 RPAVWLNAGIHSREWISQATAIWTARKIVSDyqRDPAITSILEKMDIFLLPVANPDG--YV---YTQTQNRlwRKTRSRN 245
Cdd:cd06240   1 KAVVWIDGGLHATEVAGSQMLPELAYRLATS--DDEEVRRILDNVILLLVPSANPDGqdLVvdwYMRYKDT--PKEGSRL 76
                        90
                ....*....|....*.
gi 61743916 246 PG--SSCIGADPNRNW 259
Cdd:cd06240  77 PWlyQKYVGHDNNRDW 92
M14-like cd06242
Peptidase M14-like domain; uncharacterized subgroup; Peptidase M14-like domain of a ...
171-235 5.26e-06

Peptidase M14-like domain; uncharacterized subgroup; Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349461 [Multi-domain]  Cd Length: 220  Bit Score: 47.30  E-value: 5.26e-06
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 61743916 171 RPAVWLNAGIHSREWISQATAIWTARkivsDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQN 235
Cdd:cd06242   1 KPTVLLVGQQHGNEPAGREAALALAR----DLAFGDDARELLEKVNVLVVPRANPDGRAANTRGN 61
M14_PaCCP-like cd06234
Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases similar ...
142-278 7.57e-06

Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases similar to Pseudomonas aerugnosa CCP (PaCCP); A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. This subgroup includes PaCCP from Pseudomonas aeruginosa, a carboxypeptidase homologous to M14D subfamily of human CCPs. Structural complexes with well-known inhibitors of metallocarboxypeptidases indicate that PaCCP might only possess C-terminal hydrolase activity against cellular substrates of particular specificity. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.


Pssm-ID: 349453 [Multi-domain]  Cd Length: 256  Bit Score: 47.18  E-value: 7.57e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 142 DLARRVKIGHSFENRPMYVLKFSTGkGVRRPAVWLNAGIHSREwiSQATaiWTA----RKIVSDYqrDPAITSILEKMDI 217
Cdd:cd06234  17 PGVRLEVLGQTLDGRDIDLLTIGDP-GTGKKKVWIIARQHPGE--TMAE--WFMegllDRLLDED--DPVSRALLEKAVF 89
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 61743916 218 FLLPVANPDGYV--YTQTqNRLwrktrsrnpgssciGADPNRNWnasfAGKGASDNPcsEVYH 278
Cdd:cd06234  90 YVVPNMNPDGSVrgNLRT-NAA--------------GVNLNREW----ANPSLERSP--EVFA 131
M14_REP34-like cd06231
Peptidase M14-like domain similar to rapid encystment phenotype 34 (REP34); This family ...
144-382 2.01e-05

Peptidase M14-like domain similar to rapid encystment phenotype 34 (REP34); This family includes Francisella tularensis protein rapid encystment phenotype 34 (REP34) which is a zinc-containing monomeric protein demonstrating carboxypeptidase B-like activity. REP34 possesses a novel topology with its substrate binding pocket deviating from the canonical M14 peptidases with a possible catalytic role for a conserved tyrosine and distinct S1' recognition site. Thus, REP34, identified as an active carboxypeptidase and a potential key F. tularensis effector protein, may help elucidate a mechanistic understanding of F. tularensis infection of phagocytic cells. A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349450 [Multi-domain]  Cd Length: 239  Bit Score: 45.76  E-value: 2.01e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 144 ARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSRE---------WISQATAIWTARKivsdyqrdpaitsilek 214
Cdd:cd06231  15 FKVRELGEVGYQGYPLFALKSPNPRGDKPRVLISAGIHGDEpagveallrFLESLAEKYLRRV----------------- 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 215 mDIFLLPVANPDGYVytqtqnrlwRKTRsRNPGssciGADPNRnwnaSFAGKGASdnpcsevyhgphanseVEVKSVVDF 294
Cdd:cd06231  78 -NLLVLPCVNPWGFE---------RNTR-ENAD----GIDLNR----SFLKDSPS----------------PEVRALMEF 122
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 295 IQKHGNFKGFIDLH--SYSQllmYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEY-------QVGPTCTTVYPASGS 365
Cdd:cd06231 123 LASLGRFDLHLDLHedWDSD---GFYLYELGPALKAGRDGLQAVDAVIPPDPISLTIDgspapdgVILRPDDPAERPGWP 199
                       250
                ....*....|....*..
gi 61743916 366 SIDWAYDNGIKFAFTFE 382
Cdd:cd06231 200 FAIYLVANGAVRTYTTE 216
M14_Nna1-like cd06237
Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases; ...
133-328 2.11e-04

Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases; uncharacterized bacterial subgroup; A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.


Pssm-ID: 349456 [Multi-domain]  Cd Length: 239  Bit Score: 42.55  E-value: 2.11e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 133 MDNIAADFPdlARRVKIGHSFENRPMYVLKFSTGKGvrRPAVWLNAGIHSREwISQATAIWT-ARKIVSDyqrDPAITSI 211
Cdd:cd06237   7 IDSLAKKPF--VKRSTIGKSVEGRPIEALTIGNPDS--KELVVLLGRQHPPE-VTGALAMQAfVETLLAD---TELAKAF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 212 LEKMDIFLLPVANPDGyVYtqtqNRLWRktrsRNPGssciGADPNRNWNAsFagkgasdnpcsevyhgphanSEVEVKSV 291
Cdd:cd06237  79 RARFRVLVVPLLNPDG-VD----LGHWR----HNAG----GVDLNRDWGP-F--------------------TQPETRAV 124
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 61743916 292 VDFIQK-----HGNFKGFIDLHSYSQLLMYPYGYSVKKAPDA 328
Cdd:cd06237 125 RDFLLElveepGGKVVFGLDFHSTWEDVFYTQPDDEKTNPPG 166
M14_Nna1-like cd18429
Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases; ...
149-260 1.14e-03

Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases; uncharacterized bacterial subgroup; A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.


Pssm-ID: 349485  Cd Length: 253  Bit Score: 40.52  E-value: 1.14e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 149 IGHSFENRPMYVLKFSTGKGVRRpaVWLNAGIHSREwisqATAIWTARKIVSDY-QRDPAITSILEKMDIFLLPVANPDG 227
Cdd:cd18429  20 IGKTVEGRPLEIIRIGNESAPHR--VFLRARAHPWE----AGGNWVVEGLVERLlQNDEEAKRFLKRYCVYILPMANKDG 93
                        90       100       110
                ....*....|....*....|....*....|...
gi 61743916 228 YVYTQTQNRLwrktrsrnpgsscIGADPNRNWN 260
Cdd:cd18429  94 VARGRTRFNA-------------NGKDLNREWD 113
M14-like cd06232
Peptidase M14-like domain; uncharacterized subfamily; Peptidase M14-like domain of a ...
148-228 1.23e-03

Peptidase M14-like domain; uncharacterized subfamily; Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.


Pssm-ID: 349451  Cd Length: 276  Bit Score: 40.45  E-value: 1.23e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 61743916 148 KIGHSFENRPMYVLKF---------STGKG-VRRPAVWLNAGIHSREWISQATAIWTARKIVSDYqrdpaiTSILEKMDI 217
Cdd:cd06232   1 YEARSYQGRDIWAREFtepstsefvSQAKLsLYKPTILISARHHANEVSSTNAALRLAELLATDP------PEILKKVNL 74
                        90
                ....*....|.
gi 61743916 218 FLLPVANPDGY 228
Cdd:cd06232  75 VIIPLENPDGY 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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