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Conserved domains on  [gi|6691420|ref|NP_033663|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Terebratulina retusa]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06602 super family cl00535
NADH:ubiquinone oxidoreductase subunit A; Validated
 1-116 3.11e-32

NADH:ubiquinone oxidoreductase subunit A; Validated


The actual alignment was detected with superfamily member MTH00202:

Pssm-ID: 469809 [Multi-domain]  Cd Length: 117  Bit Score: 109.31  E-value: 3.11e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420     1 MNSYSTFLLITLIVPPLLILLGLMAHTRSLLDRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFL 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 6691420    81 SFSSTHLISSLMWASFILVLILGTLYEWYEGSLSWM 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
 
Name Accession Description Interval E-value
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 3.11e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 109.31  E-value: 3.11e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420     1 MNSYSTFLLITLIVPPLLILLGLMAHTRSLLDRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFL 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 6691420    81 SFSSTHLISSLMWASFILVLILGTLYEWYEGSLSWM 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-113 4.87e-19

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 75.15  E-value: 4.87e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420     32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIP--IPFLSFSSTHLISSLMwasFILVLILGTLYEWY 109
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwaVSFRELGWFGFVEMLI---FIAILLVGLVYAWK 89


                  ....
gi 6691420    110 EGSL 113
Cdd:pfam00507  90 KGAL 93
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 4.60e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.92  E-value: 4.60e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420   32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIP--FLSFSSTHLISSLMwasFILVLILGTLYEWY 109
Cdd:COG0838  35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAvvFRELGWFGLIEMLV---FIAILLVGLIYAWK 111


                ....*.
gi 6691420  110 EGSLSW 115
Cdd:COG0838 112 KGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 3.11e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 109.31  E-value: 3.11e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420     1 MNSYSTFLLITLIVPPLLILLGLMAHTRSLLDRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFL 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 6691420    81 SFSSTHLISSLMWASFILVLILGTLYEWYEGSLSWM 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 2.05e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 102.24  E-value: 2.05e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420     1 MNSYSTFLLITLIVPPLLILLGLMAHTRSLLDRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFL 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 6691420    81 SFSSTHLISSLMWASFILVLILGTLYEWYEGSLSWM 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 27-115 9.81e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 98.01  E-value: 9.81e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    27 TRSLLDRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFLSFSSTHLISSLMWASFILVLILGTLY 106
Cdd:MTH00012  27 ARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIH 106


                 ....*....
gi 6691420   107 EWYEGSLSW 115
Cdd:MTH00012 107 EWREGSLDW 115
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 29-115 5.22e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 93.30  E-value: 5.22e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    29 SLLDRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFLSFSSTHLISSLMWASFILVLILGTLYEW 108
Cdd:MTH00161  27 SIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEW 106


                 ....*..
gi 6691420   109 YEGSLSW 115
Cdd:MTH00161 107 NQGALEW 113
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 32-115 1.12e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 90.36  E-value: 1.12e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFlsfsSTHLIS---SLMWASFILVLI-LGTLYE 107
Cdd:MTH00136  31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPW----GDQLPSpllTFFWATAVLILLtLGLIYE 106


                 ....*...
gi 6691420   108 WYEGSLSW 115
Cdd:MTH00136 107 WLQGGLEW 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 2.62e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 89.27  E-value: 2.62e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420     1 MNSYSTFLLITLIVPPLLILLGLMAHTRSLlDRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFL 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 6691420    81 SFSSTHLISSLMWASFILVLILGTLYEWYEGSLSW 115
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEW 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 32-115 7.08e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 88.13  E-value: 7.08e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFLSfSSTHLISSLMWASFILVLI-LGTLYEWYE 110
Cdd:MTH00069  29 DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWAS-QLNTPTNTLFWSTLILILLtLGLIYEWIQ 107


                 ....*
gi 6691420   111 GSLSW 115
Cdd:MTH00069 108 GGLEW 112
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-115 1.38e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 84.99  E-value: 1.38e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    34 QKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFLSFSSTHLISSLMWASFILVLILGTLYEWYEGSL 113
Cdd:MTH00106  32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                 ..
gi 6691420   114 SW 115
Cdd:MTH00106 112 EW 113
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 32-116 5.01e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 80.70  E-value: 5.01e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFlSFSSTHLISSLMWASFILVLI-LGTLYEWYE 110
Cdd:MTH00113  30 DNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPW-AINLTTPTTTLTWATIILTLLtLGLIYEWLQ 108


                 ....*.
gi 6691420   111 GSLSWM 116
Cdd:MTH00113 109 GGLEWA 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 29-115 1.66e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 76.86  E-value: 1.66e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    29 SLLDRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFLSFSSTHlisSLMWASFILVLI-LGTLYE 107
Cdd:MTH00203  28 VNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL---SLLLAFLFLILLtLGLIYE 104


                 ....*...
gi 6691420   108 WYEGSLSW 115
Cdd:MTH00203 105 WLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-113 4.87e-19

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 75.15  E-value: 4.87e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420     32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIP--IPFLSFSSTHLISSLMwasFILVLILGTLYEWY 109
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPwaVSFRELGWFGFVEMLI---FIAILLVGLVYAWK 89


                  ....
gi 6691420    110 EGSL 113
Cdd:pfam00507  90 KGAL 93
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 4.60e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.92  E-value: 4.60e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420   32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIP--FLSFSSTHLISSLMwasFILVLILGTLYEWY 109
Cdd:COG0838  35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAvvFRELGWFGLIEMLV---FIAILLVGLIYAWK 111


                ....*.
gi 6691420  110 EGSLSW 115
Cdd:COG0838 112 KGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-115 5.86e-15

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 65.66  E-value: 5.86e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPfLSFSSTHLISSLMWASFILVLILGTLYEWYEG 111
Cdd:PRK06602  38 DREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWA-VSFREIGWLGFVEAMIFILVLLVGLVYLWRKG 116


                 ....
gi 6691420   112 SLSW 115
Cdd:PRK06602 117 ALDW 120
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 32-115 4.34e-14

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 63.16  E-value: 4.34e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFLsFSSTHLISSLMWASFILVLILGTLYEWYEG 111
Cdd:MTH00018  30 DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVL-YNQIAPFGFWTMVGFLFILTLGLIYEWIKG 108


                 ....
gi 6691420   112 SLSW 115
Cdd:MTH00018 109 GLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 9.83e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 62.64  E-value: 9.83e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFLsFSSTHLISSLMWASFILVLILGTLYEWYEG 111
Cdd:MTH00030  40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIV-FNQLNLFSFWIVYTFLIVLAIGLAYEWIKG 118


                 ....
gi 6691420   112 SLSW 115
Cdd:MTH00030 119 GLEW 122
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.07e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 62.03  E-value: 1.07e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPfLSFSSTHLISSLMWASFILVLILGTLYEWYEG 111
Cdd:MTH00055  35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWC-VVYNQIGLFGFWVMYLFLIILTIGLIYEWVKG 113


                 ....
gi 6691420   112 SLSW 115
Cdd:MTH00055 114 GLEW 117
ndhC CHL00022
NADH dehydrogenase subunit 3
 34-115 1.60e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 48.83  E-value: 1.60e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    34 QKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPfLSFSSTHLISSLMWASFILVLILGTLYEWYEGSL 113
Cdd:CHL00022  39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWA-MSFDVLGVSAFIEALIFVLILIVGLVYAWRKGAL 117


                 ..
gi 6691420   114 SW 115
Cdd:CHL00022 118 EW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 1.43e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 46.20  E-value: 1.43e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDPKDMARIP--FSMRFFLLAVIFLVFDIELALIIPIPfLSFSSTHLISSLMWASFILVLILGTLYEWY 109
Cdd:PRK07928  34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWA-VSFDALGVFGLVEMALFMLTVFVAYAYVWR 112


                 ....*.
gi 6691420   110 EGSLSW 115
Cdd:PRK07928 113 RGGLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-116 1.29e-06

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 43.96  E-value: 1.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPfLSFSSTHLISSLMWASFILVLILGTLYEWYEG 111
Cdd:PRK07756  39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWA-VAYDKLGLFALIEMLIFVVMLLVGLAYAWKKK 117


                 ....*
gi 6691420   112 SLSWM 116
Cdd:PRK07756 118 VLQWL 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
32-115 1.25e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.19  E-value: 1.25e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    32 DRQKSSPFECGFDP-KDMARIpfSMRFFLLAVIFLVFDIELALIIP--IPFLSFSSTHLISSLMwasFILVLILGTLYEW 108
Cdd:PRK08489  44 EKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPwaVDFKLLGLFGLIEMLL---FIVLLTIGFIYAW 118


                 ....*..
gi 6691420   109 YEGSLSW 115
Cdd:PRK08489 119 KKGALEW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 22-117 4.25e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 4.25e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6691420    22 GLMAHTRSLLDRQKSSPFECGFDPKDMARIPFSMRFFLLAVIFLVFDIELALIIPIPFLSFSSTHLISSLMwasFILVLI 101
Cdd:MTH00060  24 GLWNNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFYNFWYYYF---FLLLLF 100

                         90
                 ....*....|....*.
gi 6691420   102 LGTLYEWYEGSLSWMF 117
Cdd:MTH00060 101 LGFVVELFSGYVRWVY 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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