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Concise Results
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Full Results
synaptopodin isoform A [Homo sapiens]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
PHA03247 super family
cl33720 large tegument protein UL36; Provisional
499-900
3.81e-06
large tegument protein UL36; Provisional
PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 51.09
E-value: 3.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 499 S S HT P ELARCPSPTMSLPSSWKY P TNA P GAF RV ASRSP AR TPPASLYHGYL P E ngvl RP EPTKQP P YQLRPSLFVLS P IK 578
Cdd:PHA03247 2629 P S PS P AANEPDPHPPPTVPPPER P RDD P APG RV SRPRR AR RLGRAAQASSP P Q ---- RP RRRAAR P TVGSLTSLADP P PP 2704
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 579 E P AKVS - P R A ASP A K P ss L DLV P NLPKG A L P PS PA L P R P srss P GLYTS P GQDSLQPTAVS PP yggdi SPVS P SRAWS P R 657
Cdd:PHA03247 2705 P P TPEP a P H A LVS A T P -- L PPG P AAARQ A S P AL PA A P A P ---- P AVPAG P ATPGGPARPAR PP ----- TTAG P PAPAP P A 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 658 A KQ A PR P SFS TR N A GIEAQDR RESLP TSP --- PWTPGASR P PSS L DGWV SP GPWE P GRG S SMSSP PP L PP P PP MSPSWSE 734
Cdd:PHA03247 2774 A PA A GP P RRL TR P A VASLSES RESLP SPW dpa DPPAAVLA P AAA L PPAA SP AGPL P PPT S AQPTA PP P PP G PP PPSLPLG 2853
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 735 R SV S P LRP e TEA RPPSR QLQ A LL A RNIINAA RR KSASPR S AGA E N - PR P FSP P RA PP P P PP PPPP P P RMRS P Q P AR P GSA 813
Cdd:PHA03247 2854 G SV A P GGD - VRR RPPSR SPA A KP A APARPPV RR LARPAV S RST E S f AL P PDQ P ER PP Q P QA PPPP Q P QPQP P P P PQ P QPP 2932
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 814 A vpgaaf A P I PR SPL P AG P SSCTSPRS - P LP A P P R P F L YRRS P TDSD V ------- SLD S EDSG A K S PGI L GYNICP R -- G 883
Cdd:PHA03247 2933 P ------ P P P PR PQP P LA P TTDPAGAG e P SG A V P Q P W L GALV P GRVA V prfrvpq PAP S REAP A S S TPP L TGHSLS R vs S 3006
410
....*....|....*..
gi 40353727 884 W NG SL R L KRGSL P AEA S 900
Cdd:PHA03247 3007 W AS SL A L HEETD P PPV S 3023
PRK13914 super family
cl36314 invasion associated endopeptidase;
15-142
4.07e-05
invasion associated endopeptidase;
PRK13914 :Pssm-ID: 237555 [Multi-domain]
Cd Length: 481
Bit Score: 47.10
E-value: 4.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 15 E KV A S E EEEV P L V vyl KEN AALL TA NGLHLSQNREA Q QSSP AP PP A EVHS PA ADV N Q N LASPSATLT T P T S N SSHNP P AT 94
Cdd:PRK13914 259 E AP A A E KQAA P V V --- KEN TNTN TA TTEKKETTTQQ Q TAPK AP TE A AKPA PA PST N T N ANKTNTNTN T N T N N TNTST P SK 335
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 40353727 95 DV N Q N PPAT vvpqslpl SSIQQ N SSEA Q LP SN GTGPA S K p S TLC A DG Q 142
Cdd:PRK13914 336 NT N T N TNSN -------- TNTNS N TNAN Q GS SN NNSNS S A - S AII A EA Q 374
PHA03247 super family
cl33720 large tegument protein UL36; Provisional
233-668
1.14e-04
large tegument protein UL36; Provisional
PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.08
E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 233 P S V VN R TA RP fgiqapg GTSQMERS P MLERRHF G EKAPAPQ P PS LP DRSPR P QRHIM S R SP MVERRMMGQRSPASERRPL 312
Cdd:PHA03247 2580 P A V TS R AR RP ------- DAPPQSAR P RAPVDDR G DPRGPAP P SP LP PDTHA P DPPPP S P SP AANEPDPHPPPTVPPPERP 2652
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 313 GNFT AP PTYT ---------- ETLSTA P LASWV R -- SP P SYSV L YPSS DP KSSHLKGQAV P ASKTGILEESMARRGS R KSM 380
Cdd:PHA03247 2653 RDDP AP GRVS rprrarrlgr AAQASS P PQRPR R ra AR P TVGS L TSLA DP PPPPPTPEPA P HALVSATPLPPGPAAA R QAS 2732
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 381 FTFVEK P KVTPN P DLLDL vqtadekrrqr DQ G EVGVEEE P FAL G AE A SN fqqep A P RDR A SPAAAEEVV P EW AS CLK S PR 460
Cdd:PHA03247 2733 PALPAA P APPAV P AGPAT ----------- PG G PARPARP P TTA G PP A PA ----- P P AAP A AGPPRRLTR P AV AS LSE S RE 2796
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 461 IQAK P KPKPNQNLSEASGKG A ELY A RRQSRMEKYVIESSSHT P ELARC P S P TMSLPSSWKY P t NAPGAF R VA SRSPA RT P 540
Cdd:PHA03247 2797 SLPS P WDPADPPAAVLAPAA A LPP A ASPAGPLPPPTSAQPTA P PPPPG P P P PSLPLGGSVA P - GGDVRR R PP SRSPA AK P 2875
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 541 P A S lyh GYL P ENGVL RP EPTKQPPYQLR P slfvls P IKEPAKVS P R A AS P AK P S sldlvpnlpkg AL PP S P AL P R P SRSS 620
Cdd:PHA03247 2876 A A P --- ARP P VRRLA RP AVSRSTESFAL P ------ P DQPERPPQ P Q A PP P PQ P Q ----------- PQ PP P P PQ P Q P PPPP 2935
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 40353727 621 P GLYTS P GQDSLQ P TAVSP P Y G GDIS P ---- VS P S R AWS PR AK - QA P R PS FST 668
Cdd:PHA03247 2936 P PRPQP P LAPTTD P AGAGE P S G AVPQ P wlga LV P G R VAV PR FR v PQ P A PS REA 2988
Name
Accession
Description
Interval
E-value
PHA03247
PHA03247 large tegument protein UL36; Provisional
499-900
3.81e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 51.09
E-value: 3.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 499 S S HT P ELARCPSPTMSLPSSWKY P TNA P GAF RV ASRSP AR TPPASLYHGYL P E ngvl RP EPTKQP P YQLRPSLFVLS P IK 578
Cdd:PHA03247 2629 P S PS P AANEPDPHPPPTVPPPER P RDD P APG RV SRPRR AR RLGRAAQASSP P Q ---- RP RRRAAR P TVGSLTSLADP P PP 2704
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 579 E P AKVS - P R A ASP A K P ss L DLV P NLPKG A L P PS PA L P R P srss P GLYTS P GQDSLQPTAVS PP yggdi SPVS P SRAWS P R 657
Cdd:PHA03247 2705 P P TPEP a P H A LVS A T P -- L PPG P AAARQ A S P AL PA A P A P ---- P AVPAG P ATPGGPARPAR PP ----- TTAG P PAPAP P A 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 658 A KQ A PR P SFS TR N A GIEAQDR RESLP TSP --- PWTPGASR P PSS L DGWV SP GPWE P GRG S SMSSP PP L PP P PP MSPSWSE 734
Cdd:PHA03247 2774 A PA A GP P RRL TR P A VASLSES RESLP SPW dpa DPPAAVLA P AAA L PPAA SP AGPL P PPT S AQPTA PP P PP G PP PPSLPLG 2853
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 735 R SV S P LRP e TEA RPPSR QLQ A LL A RNIINAA RR KSASPR S AGA E N - PR P FSP P RA PP P P PP PPPP P P RMRS P Q P AR P GSA 813
Cdd:PHA03247 2854 G SV A P GGD - VRR RPPSR SPA A KP A APARPPV RR LARPAV S RST E S f AL P PDQ P ER PP Q P QA PPPP Q P QPQP P P P PQ P QPP 2932
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 814 A vpgaaf A P I PR SPL P AG P SSCTSPRS - P LP A P P R P F L YRRS P TDSD V ------- SLD S EDSG A K S PGI L GYNICP R -- G 883
Cdd:PHA03247 2933 P ------ P P P PR PQP P LA P TTDPAGAG e P SG A V P Q P W L GALV P GRVA V prfrvpq PAP S REAP A S S TPP L TGHSLS R vs S 3006
410
....*....|....*..
gi 40353727 884 W NG SL R L KRGSL P AEA S 900
Cdd:PHA03247 3007 W AS SL A L HEETD P PPV S 3023
PRK13914
PRK13914 invasion associated endopeptidase;
15-142
4.07e-05
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain]
Cd Length: 481
Bit Score: 47.10
E-value: 4.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 15 E KV A S E EEEV P L V vyl KEN AALL TA NGLHLSQNREA Q QSSP AP PP A EVHS PA ADV N Q N LASPSATLT T P T S N SSHNP P AT 94
Cdd:PRK13914 259 E AP A A E KQAA P V V --- KEN TNTN TA TTEKKETTTQQ Q TAPK AP TE A AKPA PA PST N T N ANKTNTNTN T N T N N TNTST P SK 335
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 40353727 95 DV N Q N PPAT vvpqslpl SSIQQ N SSEA Q LP SN GTGPA S K p S TLC A DG Q 142
Cdd:PRK13914 336 NT N T N TNSN -------- TNTNS N TNAN Q GS SN NNSNS S A - S AII A EA Q 374
PHA03247
PHA03247 large tegument protein UL36; Provisional
233-668
1.14e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.08
E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 233 P S V VN R TA RP fgiqapg GTSQMERS P MLERRHF G EKAPAPQ P PS LP DRSPR P QRHIM S R SP MVERRMMGQRSPASERRPL 312
Cdd:PHA03247 2580 P A V TS R AR RP ------- DAPPQSAR P RAPVDDR G DPRGPAP P SP LP PDTHA P DPPPP S P SP AANEPDPHPPPTVPPPERP 2652
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 313 GNFT AP PTYT ---------- ETLSTA P LASWV R -- SP P SYSV L YPSS DP KSSHLKGQAV P ASKTGILEESMARRGS R KSM 380
Cdd:PHA03247 2653 RDDP AP GRVS rprrarrlgr AAQASS P PQRPR R ra AR P TVGS L TSLA DP PPPPPTPEPA P HALVSATPLPPGPAAA R QAS 2732
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 381 FTFVEK P KVTPN P DLLDL vqtadekrrqr DQ G EVGVEEE P FAL G AE A SN fqqep A P RDR A SPAAAEEVV P EW AS CLK S PR 460
Cdd:PHA03247 2733 PALPAA P APPAV P AGPAT ----------- PG G PARPARP P TTA G PP A PA ----- P P AAP A AGPPRRLTR P AV AS LSE S RE 2796
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 461 IQAK P KPKPNQNLSEASGKG A ELY A RRQSRMEKYVIESSSHT P ELARC P S P TMSLPSSWKY P t NAPGAF R VA SRSPA RT P 540
Cdd:PHA03247 2797 SLPS P WDPADPPAAVLAPAA A LPP A ASPAGPLPPPTSAQPTA P PPPPG P P P PSLPLGGSVA P - GGDVRR R PP SRSPA AK P 2875
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 541 P A S lyh GYL P ENGVL RP EPTKQPPYQLR P slfvls P IKEPAKVS P R A AS P AK P S sldlvpnlpkg AL PP S P AL P R P SRSS 620
Cdd:PHA03247 2876 A A P --- ARP P VRRLA RP AVSRSTESFAL P ------ P DQPERPPQ P Q A PP P PQ P Q ----------- PQ PP P P PQ P Q P PPPP 2935
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 40353727 621 P GLYTS P GQDSLQ P TAVSP P Y G GDIS P ---- VS P S R AWS PR AK - QA P R PS FST 668
Cdd:PHA03247 2936 P PRPQP P LAPTTD P AGAGE P S G AVPQ P wlga LV P G R VAV PR FR v PQ P A PS REA 2988
Name
Accession
Description
Interval
E-value
PHA03247
PHA03247 large tegument protein UL36; Provisional
499-900
3.81e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 51.09
E-value: 3.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 499 S S HT P ELARCPSPTMSLPSSWKY P TNA P GAF RV ASRSP AR TPPASLYHGYL P E ngvl RP EPTKQP P YQLRPSLFVLS P IK 578
Cdd:PHA03247 2629 P S PS P AANEPDPHPPPTVPPPER P RDD P APG RV SRPRR AR RLGRAAQASSP P Q ---- RP RRRAAR P TVGSLTSLADP P PP 2704
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 579 E P AKVS - P R A ASP A K P ss L DLV P NLPKG A L P PS PA L P R P srss P GLYTS P GQDSLQPTAVS PP yggdi SPVS P SRAWS P R 657
Cdd:PHA03247 2705 P P TPEP a P H A LVS A T P -- L PPG P AAARQ A S P AL PA A P A P ---- P AVPAG P ATPGGPARPAR PP ----- TTAG P PAPAP P A 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 658 A KQ A PR P SFS TR N A GIEAQDR RESLP TSP --- PWTPGASR P PSS L DGWV SP GPWE P GRG S SMSSP PP L PP P PP MSPSWSE 734
Cdd:PHA03247 2774 A PA A GP P RRL TR P A VASLSES RESLP SPW dpa DPPAAVLA P AAA L PPAA SP AGPL P PPT S AQPTA PP P PP G PP PPSLPLG 2853
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 735 R SV S P LRP e TEA RPPSR QLQ A LL A RNIINAA RR KSASPR S AGA E N - PR P FSP P RA PP P P PP PPPP P P RMRS P Q P AR P GSA 813
Cdd:PHA03247 2854 G SV A P GGD - VRR RPPSR SPA A KP A APARPPV RR LARPAV S RST E S f AL P PDQ P ER PP Q P QA PPPP Q P QPQP P P P PQ P QPP 2932
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 814 A vpgaaf A P I PR SPL P AG P SSCTSPRS - P LP A P P R P F L YRRS P TDSD V ------- SLD S EDSG A K S PGI L GYNICP R -- G 883
Cdd:PHA03247 2933 P ------ P P P PR PQP P LA P TTDPAGAG e P SG A V P Q P W L GALV P GRVA V prfrvpq PAP S REAP A S S TPP L TGHSLS R vs S 3006
410
....*....|....*..
gi 40353727 884 W NG SL R L KRGSL P AEA S 900
Cdd:PHA03247 3007 W AS SL A L HEETD P PPV S 3023
PRK13914
PRK13914 invasion associated endopeptidase;
15-142
4.07e-05
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain]
Cd Length: 481
Bit Score: 47.10
E-value: 4.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 15 E KV A S E EEEV P L V vyl KEN AALL TA NGLHLSQNREA Q QSSP AP PP A EVHS PA ADV N Q N LASPSATLT T P T S N SSHNP P AT 94
Cdd:PRK13914 259 E AP A A E KQAA P V V --- KEN TNTN TA TTEKKETTTQQ Q TAPK AP TE A AKPA PA PST N T N ANKTNTNTN T N T N N TNTST P SK 335
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 40353727 95 DV N Q N PPAT vvpqslpl SSIQQ N SSEA Q LP SN GTGPA S K p S TLC A DG Q 142
Cdd:PRK13914 336 NT N T N TNSN -------- TNTNS N TNAN Q GS SN NNSNS S A - S AII A EA Q 374
PHA03247
PHA03247 large tegument protein UL36; Provisional
233-668
1.14e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.08
E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 233 P S V VN R TA RP fgiqapg GTSQMERS P MLERRHF G EKAPAPQ P PS LP DRSPR P QRHIM S R SP MVERRMMGQRSPASERRPL 312
Cdd:PHA03247 2580 P A V TS R AR RP ------- DAPPQSAR P RAPVDDR G DPRGPAP P SP LP PDTHA P DPPPP S P SP AANEPDPHPPPTVPPPERP 2652
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 313 GNFT AP PTYT ---------- ETLSTA P LASWV R -- SP P SYSV L YPSS DP KSSHLKGQAV P ASKTGILEESMARRGS R KSM 380
Cdd:PHA03247 2653 RDDP AP GRVS rprrarrlgr AAQASS P PQRPR R ra AR P TVGS L TSLA DP PPPPPTPEPA P HALVSATPLPPGPAAA R QAS 2732
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 381 FTFVEK P KVTPN P DLLDL vqtadekrrqr DQ G EVGVEEE P FAL G AE A SN fqqep A P RDR A SPAAAEEVV P EW AS CLK S PR 460
Cdd:PHA03247 2733 PALPAA P APPAV P AGPAT ----------- PG G PARPARP P TTA G PP A PA ----- P P AAP A AGPPRRLTR P AV AS LSE S RE 2796
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 461 IQAK P KPKPNQNLSEASGKG A ELY A RRQSRMEKYVIESSSHT P ELARC P S P TMSLPSSWKY P t NAPGAF R VA SRSPA RT P 540
Cdd:PHA03247 2797 SLPS P WDPADPPAAVLAPAA A LPP A ASPAGPLPPPTSAQPTA P PPPPG P P P PSLPLGGSVA P - GGDVRR R PP SRSPA AK P 2875
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 541 P A S lyh GYL P ENGVL RP EPTKQPPYQLR P slfvls P IKEPAKVS P R A AS P AK P S sldlvpnlpkg AL PP S P AL P R P SRSS 620
Cdd:PHA03247 2876 A A P --- ARP P VRRLA RP AVSRSTESFAL P ------ P DQPERPPQ P Q A PP P PQ P Q ----------- PQ PP P P PQ P Q P PPPP 2935
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 40353727 621 P GLYTS P GQDSLQ P TAVSP P Y G GDIS P ---- VS P S R AWS PR AK - QA P R PS FST 668
Cdd:PHA03247 2936 P PRPQP P LAPTTD P AGAGE P S G AVPQ P wlga LV P G R VAV PR FR v PQ P A PS REA 2988
PHA03247
PHA03247 large tegument protein UL36; Provisional
50-352
6.20e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 43.77
E-value: 6.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 50 A Q Q S SPA P P -- PA EVHS PA ADVNQNLASPS A TLT T PTSNSSHN PPA TDVNQN P PATVV P QSLP LS SIQQNSSEAQL P SNG 127
Cdd:PHA03247 2728 A R Q A SPA L P aa PA PPAV PA GPATPGGPARP A RPP T TAGPPAPA PPA APAAGP P RRLTR P AVAS LS ESRESLPSPWD P ADP 2807
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 128 TGPASK P STLCADGQPQ A PAEEVRC S TLLIDKVST P ATTTSTFSREATLI P ---- SS RPP A sdfmsssllidi QPNTLVV 203
Cdd:PHA03247 2808 PAAVLA P AAALPPAASP A GPLPPPT S AQPTAPPPP P GPPPPSLPLGGSVA P ggdv RR RPP S ------------ RSPAAKP 2875
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 204 S A DQEMSG R AA A TTPTKVYS E vhf TL A K PP SVVN R TAR P FGIQA P GGTS Q MERS P MLERRH fg EKA P A PQPP SL P DRS P R 283
Cdd:PHA03247 2876 A A PARPPV R RL A RPAVSRST E --- SF A L PP DQPE R PPQ P QAPPP P QPQP Q PPPP P QPQPPP -- PPP P R PQPP LA P TTD P A 2950
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 284 PQRHIMSRS P ------ M V ER R MMGQ R SPASERR P LGNFT A PP T YTE T LSTAP - LA SW VR S -------- PP SY S V --- L Y P 345
Cdd:PHA03247 2951 GAGEPSGAV P qpwlga L V PG R VAVP R FRVPQPA P SREAP A SS T PPL T GHSLS r VS SW AS S lalheetd PP PV S L kqt L W P 3030
....*..
gi 40353727 346 SS D PKS S 352
Cdd:PHA03247 3031 PD D TED S 3037
PRK12323
PRK12323 DNA polymerase III subunit gamma/tau;
509-712
1.58e-03
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain]
Cd Length: 700
Bit Score: 42.17
E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 509 P SPTMSL P SSWKY P TN A PG A FRVASRSPARTP PA SLYHGYLPENG V LRPEPTKQ P PYQLRPSLFVL S PIKEPAKVS P RA A 588
Cdd:PRK12323 374 P ATAAAA P VAQPA P AA A AP A AAAPAPAAPPAA PA AAPAAAAAARA V AAAPARRS P APEALAAARQA S ARGPGGAPA P AP A 453
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 589 SP A K P SS l DLV P NLPKGALPPSP A LPR P S R SS P GLYTS P GQ D SLQ P TAVS PP YGGDIS P VS P SR A WSPRAKQA prpsf ST 668
Cdd:PRK12323 454 PA A A P AA - AAR P AAAGPRPVAAA A AAA P A R AA P AAAPA P AD D DPP P WEEL PP EFASPA P AQ P DA A PAGWVAES ----- IP 527
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 40353727 669 RN A GIEAQ D RR E S L PTS P PWT P g A S R PPSSLDGW V S P G P WEPGR 712
Cdd:PRK12323 528 DP A TADPD D AF E T L APA P AAA P - A P R AAAATEPV V A P R P PRASA 570
PRK07764
PRK07764 DNA polymerase III subunits gamma and tau; Validated
553-749
2.00e-03
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 41.90
E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 553 G VLR P EPTKQ P PYQL RP S lfvl S P IKEP A KVS P RA A SP A KPSSLDLVPNL P KG A l P P SPALPRPSRSSPGLYTSPGQDSL 632
Cdd:PRK07764 599 G PPA P ASSGP P EEAA RP A ---- A P AAPA A PAA P AP A GA A AAPAEASAAPA P GV A - A P EHHPKHVAVPDASDGGDGWPAKA 673
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 633 QPT A VSP P YGGDISPVSPSR A WSPR A KQ AP R P SFSTR nag IEAQ D RRESL P TSPPWTPG A SR P PSSLDGWVS P G P WE P GR 712
Cdd:PRK07764 674 GGA A PAA P PPAPAPAAPAAP A GAAP A QP AP A P AATPP --- AGQA D DPAAQ P PQAAQGAS A PS P AADDPVPLP P E P DD P PD 750
170 180 190
....*....|....*....|....*....|....*..
gi 40353727 713 GSSMSSP PP L PP P P PMSPSWSERSVSPLRP E T E ARPP 749
Cdd:PRK07764 751 PAGAPAQ PP P PP A P APAAAPAAAPPPSPPS E E E EMAE 787
PHA03307
PHA03307 transcriptional regulator ICP4; Provisional
550-873
5.78e-03
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain]
Cd Length: 1352
Bit Score: 40.54
E-value: 5.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 550 P EN G VLRPE P TKQPPYQLRP SL FV L S P IKEPAKV SP RAAS P AK P SSLDLV P NLPKGALP P S P A L PRPS R SSPGLYTS P GQ 629
Cdd:PHA03307 71 P PP G PGTEA P ANESRSTPTW SL ST L A P ASPAREG SP TPPG P SS P DPPPPT P PPASPPPS P A P D L SEML R PVGSPGPP P AA 150
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 630 DSLQPT A VSPP ------ YGGDISPVSP S RAWSP RA KQA P RPSFSTRNAGIE A QD R re SLPT S P P WTPG AS R P pssldgwv 703
Cdd:PHA03307 151 SPPAAG A SPAA vasdaa SSRQAALPLS S PEETA RA PSS P PAEPPPSTPPAA A SP R -- PPRR S S P ISAS AS S P -------- 220
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 704 S P G P WEPGRGSSMS S PPPLPPPPPMSPS W SERSVS PL RPETEARP P S R QLQ A LLA rnii N AARRKSASPR S AGAENP R PF 783
Cdd:PHA03307 221 A P A P GRSAADDAGA S SSDSSSSESSGCG W GPENEC PL PRPAPITL P T R IWE A SGW ---- N GPSSRPGPAS S SSSPRE R SP 296
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40353727 784 SP PRAP P PPP P P P PP P PRMR S PQPA R PG S AAVPGAAFAPIPRSPLPA GPS SC tsp RSP L P AP P R P FLYRR SP TDSDVSLD 863
Cdd:PHA03307 297 SP SPSS P GSG P A P SS P RASS S SSSS R ES S SSSTSSSSESSRGAAVSP GPS PS --- RSP S P SR P P P PADPS SP RKRPRPSR 373
330
....*....|
gi 40353727 864 SED S G A K S P G 873
Cdd:PHA03307 374 APS S P A A S A G 383
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
