mRNA decay activator protein ZFP36L2 [Homo sapiens]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Tis11B_N | pfam04553 | Tis11B like protein, N terminus; Members of this family always contain a tandem repeat of CCCH ... |
1-131 | 1.07e-34 | |||
Tis11B like protein, N terminus; Members of this family always contain a tandem repeat of CCCH zinc fingers pfam00642. Tis11B, Tis11D and their homologs are thought to be regulatory proteins involved in the response to growth factors. The function of the N terminus is unknown. : Pssm-ID: 461350 Cd Length: 114 Bit Score: 125.75 E-value: 1.07e-34
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CTH1 super family | cl34885 | CCCH-type Zn-finger protein [General function prediction only]; |
154-216 | 2.32e-12 | |||
CCCH-type Zn-finger protein [General function prediction only]; The actual alignment was detected with superfamily member COG5063: Pssm-ID: 227395 [Multi-domain] Cd Length: 351 Bit Score: 68.16 E-value: 2.32e-12
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Name | Accession | Description | Interval | E-value | |||
Tis11B_N | pfam04553 | Tis11B like protein, N terminus; Members of this family always contain a tandem repeat of CCCH ... |
1-131 | 1.07e-34 | |||
Tis11B like protein, N terminus; Members of this family always contain a tandem repeat of CCCH zinc fingers pfam00642. Tis11B, Tis11D and their homologs are thought to be regulatory proteins involved in the response to growth factors. The function of the N terminus is unknown. Pssm-ID: 461350 Cd Length: 114 Bit Score: 125.75 E-value: 1.07e-34
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CTH1 | COG5063 | CCCH-type Zn-finger protein [General function prediction only]; |
154-216 | 2.32e-12 | |||
CCCH-type Zn-finger protein [General function prediction only]; Pssm-ID: 227395 [Multi-domain] Cd Length: 351 Bit Score: 68.16 E-value: 2.32e-12
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zf-CCCH | pfam00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar); |
154-180 | 4.20e-08 | |||
Zinc finger C-x8-C-x5-C-x3-H type (and similar); Pssm-ID: 459885 [Multi-domain] Cd Length: 27 Bit Score: 48.73 E-value: 4.20e-08
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ZnF_C3H1 | smart00356 | zinc finger; |
191-217 | 3.52e-06 | |||
zinc finger; Pssm-ID: 214632 [Multi-domain] Cd Length: 27 Bit Score: 43.39 E-value: 3.52e-06
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Name | Accession | Description | Interval | E-value | |||
Tis11B_N | pfam04553 | Tis11B like protein, N terminus; Members of this family always contain a tandem repeat of CCCH ... |
1-131 | 1.07e-34 | |||
Tis11B like protein, N terminus; Members of this family always contain a tandem repeat of CCCH zinc fingers pfam00642. Tis11B, Tis11D and their homologs are thought to be regulatory proteins involved in the response to growth factors. The function of the N terminus is unknown. Pssm-ID: 461350 Cd Length: 114 Bit Score: 125.75 E-value: 1.07e-34
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CTH1 | COG5063 | CCCH-type Zn-finger protein [General function prediction only]; |
154-216 | 2.32e-12 | |||
CCCH-type Zn-finger protein [General function prediction only]; Pssm-ID: 227395 [Multi-domain] Cd Length: 351 Bit Score: 68.16 E-value: 2.32e-12
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CTH1 | COG5063 | CCCH-type Zn-finger protein [General function prediction only]; |
154-216 | 6.84e-11 | |||
CCCH-type Zn-finger protein [General function prediction only]; Pssm-ID: 227395 [Multi-domain] Cd Length: 351 Bit Score: 63.53 E-value: 6.84e-11
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CTH1 | COG5063 | CCCH-type Zn-finger protein [General function prediction only]; |
150-220 | 4.76e-10 | |||
CCCH-type Zn-finger protein [General function prediction only]; Pssm-ID: 227395 [Multi-domain] Cd Length: 351 Bit Score: 61.22 E-value: 4.76e-10
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zf-CCCH | pfam00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar); |
154-180 | 4.20e-08 | |||
Zinc finger C-x8-C-x5-C-x3-H type (and similar); Pssm-ID: 459885 [Multi-domain] Cd Length: 27 Bit Score: 48.73 E-value: 4.20e-08
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zf-CCCH | pfam00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar); |
192-216 | 1.23e-07 | |||
Zinc finger C-x8-C-x5-C-x3-H type (and similar); Pssm-ID: 459885 [Multi-domain] Cd Length: 27 Bit Score: 47.57 E-value: 1.23e-07
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ZnF_C3H1 | smart00356 | zinc finger; |
191-217 | 3.52e-06 | |||
zinc finger; Pssm-ID: 214632 [Multi-domain] Cd Length: 27 Bit Score: 43.39 E-value: 3.52e-06
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ZnF_C3H1 | smart00356 | zinc finger; |
153-179 | 1.32e-05 | |||
zinc finger; Pssm-ID: 214632 [Multi-domain] Cd Length: 27 Bit Score: 41.85 E-value: 1.32e-05
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zf_CCCH_4 | pfam18345 | Zinc finger domain; This is a zinc finger domain found in Zinc finger CCCH-type with G patch ... |
159-178 | 8.31e-03 | |||
Zinc finger domain; This is a zinc finger domain found in Zinc finger CCCH-type with G patch domain-containing proteins such as ZIP. Functional studies indicate that ZIP specifically targets EGFR and represses its transcription, and that the zinc finger and the coiled-coil domains are central to that process. Pssm-ID: 465719 [Multi-domain] Cd Length: 19 Bit Score: 33.93 E-value: 8.31e-03
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Blast search parameters | ||||
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