|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10767 |
PRK10767 |
chaperone protein DnaJ; Provisional |
377-448 |
3.29e-21 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 236757 [Multi-domain] Cd Length: 371 Bit Score: 95.21 E-value: 3.29e-21
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 262206280 377 SKRkDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEVQkeeekkFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK10767 2 AKR-DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGdKEAEEK------FKEIKEAYEVLSDPQKRAAYD 67
|
|
| DnaJ_bact |
TIGR02349 |
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ... |
381-469 |
4.18e-21 |
|
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Pssm-ID: 274090 [Multi-domain] Cd Length: 354 Bit Score: 94.59 E-value: 4.18e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 381 DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYDS-GQDLDEEGM- 458
Cdd:TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAE------EKFKEINEAYEVLSDPEKRAQYDQfGHAGFNGGGg 74
|
90
....*....|..
gi 262206280 459 -NMGDFDPNNIF 469
Cdd:TIGR02349 75 gGGGGFNGFDIG 86
|
|
| DnaJ |
pfam00226 |
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ... |
381-448 |
4.32e-20 |
|
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.
Pssm-ID: 395170 [Multi-domain] Cd Length: 63 Bit Score: 83.68 E-value: 4.32e-20
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 262206280 381 DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGasaevQKEEEKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:pfam00226 1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPG-----DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
|
|
| terminal_TopJ |
NF037946 |
terminal organelle assembly protein TopJ; |
377-469 |
7.41e-20 |
|
terminal organelle assembly protein TopJ;
Pssm-ID: 468284 [Multi-domain] Cd Length: 440 Bit Score: 91.81 E-value: 7.41e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 377 SKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYDS-GQDlDE 455
Cdd:NF037946 2 EEKRDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAA------EIFAEINEAYEVLSNPEKRANYDKyGHD-GV 74
|
90
....*....|....
gi 262206280 456 EGMNMGDFDPNNIF 469
Cdd:NF037946 75 DGEGGFGFDAFDVF 88
|
|
| PRK14289 |
PRK14289 |
molecular chaperone DnaJ; |
379-462 |
2.25e-19 |
|
molecular chaperone DnaJ;
Pssm-ID: 237660 [Multi-domain] Cd Length: 386 Bit Score: 89.89 E-value: 2.25e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYDS-------- 449
Cdd:PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGdKEAE------EKFKEAAEAYDVLSDPDKRSRYDQfghagvgg 77
|
90
....*....|....*.
gi 262206280 450 ---GQDLDEEGMNMGD 462
Cdd:PRK14289 78 aagGGGFSGEGMSMED 93
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
169-398 |
2.99e-19 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 86.98 E-value: 2.99e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 169 LEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDhekaci 248
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPD------ 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 249 acrNAKALKAKkedGNKAFKEGNYKLAYELYTEALGIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYI 328
Cdd:COG0457 75 ---DAEALNNL---GLALQALGRYEEALEDYDKALELDPDD----AEALYNLGLALLELGRYDEAIEAYERALELDPDDA 144
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 329 KAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELKKSKRKDYYKILGVDKNASEDEIK 398
Cdd:COG0457 145 DALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAIL 214
|
|
| PRK14277 |
PRK14277 |
chaperone protein DnaJ; Provisional |
379-463 |
1.44e-18 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184599 [Multi-domain] Cd Length: 386 Bit Score: 87.55 E-value: 1.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQkeeekKFKEVGEAFTILSDPKKKTRYDSGQD--LDEE 456
Cdd:PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQ-----KFKEINEAYEILSDPQKRAQYDQFGHaaFDPG 78
|
....*..
gi 262206280 457 GMNMGDF 463
Cdd:PRK14277 79 GFGQGGF 85
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
27-195 |
5.52e-18 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 83.52 E-value: 5.52e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 27 EAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCH 106
Cdd:COG0457 7 DAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 107 LSLGNAMAACRSFQRALELDHKNAQAqqefknanavmeYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECL 186
Cdd:COG0457 87 QALGRYEEALEDYDKALELDPDDAEA------------LYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIAL 154
|
....*....
gi 262206280 187 AMLGRYPEA 195
Cdd:COG0457 155 EKLGRYEEA 163
|
|
| DnaJ |
COG0484 |
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ... |
381-448 |
5.79e-18 |
|
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440252 [Multi-domain] Cd Length: 139 Bit Score: 80.52 E-value: 5.79e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 262206280 381 DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQkeeekKFKEVGEAFTILSDPKKKTRYD 448
Cdd:COG0484 1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEAEE-----KFKEINEAYEVLSDPEKRAAYD 63
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
55-283 |
1.55e-17 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 81.98 E-value: 1.55e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 55 IDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAqq 134
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEA-- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 135 efknanavmeYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALY 214
Cdd:COG0457 79 ----------LNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALY 148
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 215 VRGLCLYYEDCIEKAVQFFVQAL-RMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEAL 283
Cdd:COG0457 149 NLGIALEKLGRYEEALELLEKLEaAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAA 218
|
|
| PRK14297 |
PRK14297 |
molecular chaperone DnaJ; |
380-448 |
2.65e-17 |
|
molecular chaperone DnaJ;
Pssm-ID: 184611 [Multi-domain] Cd Length: 380 Bit Score: 83.68 E-value: 2.65e-17
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14297 4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGnKEAE------EKFKEINEAYQVLSDPQKKAQYD 67
|
|
| PRK14290 |
PRK14290 |
chaperone protein DnaJ; Provisional |
380-469 |
2.90e-17 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172778 [Multi-domain] Cd Length: 365 Bit Score: 83.06 E-value: 2.90e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQkeeeKKFKEVGEAFTILSDPKKKTRYDSGQDLD----E 455
Cdd:PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAE----EKFKEISEAYEVLSDPQKRRQYDQTGTVDfgagG 78
|
90
....*....|....*...
gi 262206280 456 EGMNMGDF----DPNNIF 469
Cdd:PRK14290 79 SNFNWDNFthfsDINDIF 96
|
|
| PRK14298 |
PRK14298 |
chaperone protein DnaJ; Provisional |
377-448 |
3.08e-17 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184612 [Multi-domain] Cd Length: 377 Bit Score: 83.36 E-value: 3.08e-17
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 262206280 377 SKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14298 2 ATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAE------EKFKEISEAYAVLSDAEKRAQYD 67
|
|
| PRK14295 |
PRK14295 |
molecular chaperone DnaJ; |
380-494 |
4.34e-17 |
|
molecular chaperone DnaJ;
Pssm-ID: 237665 [Multi-domain] Cd Length: 389 Bit Score: 82.97 E-value: 4.34e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYDSGQDLdeegM 458
Cdd:PRK14295 9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGdAKAE------ERFKEISEAYDVLSDEKKRKEYDEARSL----F 78
|
90 100 110
....*....|....*....|....*....|....*.
gi 262206280 459 NMGDFDPNnifkaffggpggfsFEASGPGNFFFQFG 494
Cdd:PRK14295 79 GNGGFRPG--------------PGGGGGGGFNFDLG 100
|
|
| PRK14292 |
PRK14292 |
chaperone protein DnaJ; Provisional |
381-469 |
5.03e-17 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237662 [Multi-domain] Cd Length: 371 Bit Score: 82.63 E-value: 5.03e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 381 DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQkeeekkFKEVGEAFTILSDPKKKTRYDSGQDLDEEGMNM 460
Cdd:PRK14292 3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEK------FAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPG 76
|
90
....*....|....*
gi 262206280 461 GD------FDPNNIF 469
Cdd:PRK14292 77 GDpfggmgFDPMDIF 91
|
|
| PRK14299 |
PRK14299 |
chaperone protein DnaJ; Provisional |
380-449 |
1.12e-16 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237667 [Multi-domain] Cd Length: 291 Bit Score: 80.37 E-value: 1.12e-16
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYDS 449
Cdd:PRK14299 4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAE------EKFKEINEAYTVLSDPEKRRIYDT 67
|
|
| DnaJ |
smart00271 |
DnaJ molecular chaperone homology domain; |
380-443 |
2.91e-16 |
|
DnaJ molecular chaperone homology domain;
Pssm-ID: 197617 [Multi-domain] Cd Length: 60 Bit Score: 73.04 E-value: 2.91e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQkeeeKKFKEVGEAFTILSDPKK 443
Cdd:smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAE----EKFKEINEAYEVLSDPEK 60
|
|
| PRK14279 |
PRK14279 |
molecular chaperone DnaJ; |
380-448 |
3.70e-16 |
|
molecular chaperone DnaJ;
Pssm-ID: 237655 [Multi-domain] Cd Length: 392 Bit Score: 80.16 E-value: 3.70e-16
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14279 9 KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGdPAAE------ERFKAVSEAHDVLSDPAKRKEYD 72
|
|
| PRK14294 |
PRK14294 |
chaperone protein DnaJ; Provisional |
377-448 |
6.41e-16 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237664 [Multi-domain] Cd Length: 366 Bit Score: 79.04 E-value: 6.41e-16
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 262206280 377 SKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEVQKEEEkkfkevGEAFTILSDPKKKTRYD 448
Cdd:PRK14294 1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGdKEAEELFKEA------AEAYEVLSDPKKRGIYD 67
|
|
| PRK14280 |
PRK14280 |
molecular chaperone DnaJ; |
377-463 |
6.64e-16 |
|
molecular chaperone DnaJ;
Pssm-ID: 237656 [Multi-domain] Cd Length: 376 Bit Score: 79.38 E-value: 6.64e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 377 SKRkDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD------SG 450
Cdd:PRK14280 2 AKR-DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGAD------EKFKEISEAYEVLSDDQKRAQYDqfghagPN 74
|
90
....*....|...
gi 262206280 451 QDLDEEGMNMGDF 463
Cdd:PRK14280 75 QGFGGGGFGGGDF 87
|
|
| PRK14291 |
PRK14291 |
chaperone protein DnaJ; Provisional |
379-468 |
7.29e-16 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237661 [Multi-domain] Cd Length: 382 Bit Score: 79.04 E-value: 7.29e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD-------SGQ 451
Cdd:PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAE------EKFKEINEAYQVLSDPEKRKLYDqfghaafSGS 75
|
90
....*....|....*...
gi 262206280 452 DLDEEGMN-MGDFDPNNI 468
Cdd:PRK14291 76 GQQQQGQEgFSDFGGGNI 93
|
|
| PRK14276 |
PRK14276 |
chaperone protein DnaJ; Provisional |
380-448 |
7.59e-16 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237653 [Multi-domain] Cd Length: 380 Bit Score: 78.98 E-value: 7.59e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14276 4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAE------EKYKEVQEAYETLSDPQKRAAYD 66
|
|
| PRK14287 |
PRK14287 |
chaperone protein DnaJ; Provisional |
379-464 |
9.13e-16 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237659 [Multi-domain] Cd Length: 371 Bit Score: 78.90 E-value: 9.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQkeeekkFKEVGEAFTILSDPKKKTRYDSGQDLDEE-- 456
Cdd:PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDK------FKEVKEAYDTLSDPQKKAHYDQFGHTDPNqg 76
|
90
....*....|
gi 262206280 457 --GMNMGDFD 464
Cdd:PRK14287 77 fgGGGAGDFG 86
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
95-386 |
1.24e-15 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 77.08 E-value: 1.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 95 FVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAqqefknanavmeYEKIAETDFEKRDFRKVVFCMDRALEFAPA 174
Cdd:COG2956 7 AALGWYFKGLNYLLNGQPDKAIDLLEEALELDPETVEA------------HLALGNLYRRRGEYDRAIRIHQKLLERDPD 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 175 CHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIacrnak 254
Cdd:COG2956 75 RAEALLELAQDYLKAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYC------ 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 255 alkakkEDGNKAFKEGNYKLAYELYTEALGIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRR 334
Cdd:COG2956 149 ------ELAELYLEQGDYDEAIEALEKALKLDPDC----ARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRL 218
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 262206280 335 AQCYMDTEQYEEAVRDYEKVYqtEKTKEHKQLLKNAQLELKKSKRKDYYKIL 386
Cdd:COG2956 219 AELYEKLGDPEEALELLRKAL--ELDPSDDLLLALADLLERKEGLEAALALL 268
|
|
| PRK14301 |
PRK14301 |
chaperone protein DnaJ; Provisional |
379-448 |
1.36e-15 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237668 [Multi-domain] Cd Length: 373 Bit Score: 78.25 E-value: 1.36e-15
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDnPEAE------QKFKEAAEAYEVLRDAEKRARYD 67
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
28-244 |
1.89e-15 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 76.31 E-value: 1.89e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 28 AETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHL 107
Cdd:COG2956 42 VEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLDRAEELLEKLLELDPDDAEALRLLAEIYE 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 108 SLGNAMAACRSFQRALELDHKNAQAQQEfknanavmeyekIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLA 187
Cdd:COG2956 122 QEGDWEKAIEVLERLLKLGPENAHAYCE------------LAELYLEQGDYDEAIEALEKALKLDPDCARALLLLAELYL 189
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 262206280 188 MLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHE 244
Cdd:COG2956 190 EQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDD 246
|
|
| PRK14283 |
PRK14283 |
chaperone protein DnaJ; Provisional |
379-448 |
2.57e-15 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184604 [Multi-domain] Cd Length: 378 Bit Score: 77.56 E-value: 2.57e-15
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAE------EKFKEISEAYAVLSDDEKRQRYD 67
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
186-362 |
4.88e-15 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 77.73 E-value: 4.88e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 186 LAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACrnakalkakkedGNK 265
Cdd:COG3914 88 LQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNL------------GEA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 266 AFKEGNYKLAYELYTEALGIDPNniktNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYE 345
Cdd:COG3914 156 LRRLGRLEEAIAALRRALELDPD----NAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQACDWE 231
|
170
....*....|....*..
gi 262206280 346 EAVRDYEKVYQTEKTKE 362
Cdd:COG3914 232 VYDRFEELLAALARGPS 248
|
|
| PRK14282 |
PRK14282 |
chaperone protein DnaJ; Provisional |
379-448 |
5.24e-15 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184603 [Multi-domain] Cd Length: 369 Bit Score: 76.37 E-value: 5.24e-15
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQkeeeKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAE----QKFKEIQEAYEVLSDPQKRAMYD 68
|
|
| PRK14284 |
PRK14284 |
chaperone protein DnaJ; Provisional |
381-448 |
7.37e-15 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237658 [Multi-domain] Cd Length: 391 Bit Score: 76.03 E-value: 7.37e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 262206280 381 DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14284 2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGdAEAE------KRFKEVSEAYEVLSDAQKRESYD 64
|
|
| termin_org_DnaJ |
TIGR03835 |
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ... |
379-466 |
9.22e-15 |
|
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274808 [Multi-domain] Cd Length: 871 Bit Score: 77.16 E-value: 9.22e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYDS-GQD-LDEE 456
Cdd:TIGR03835 1 KRDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAA------SIFAEINEANDVLSNPKKRANYDKyGHDgVDRE 74
|
90
....*....|
gi 262206280 457 GMNmgDFDPN 466
Cdd:TIGR03835 75 DDF--DFQAD 82
|
|
| DnaJ |
cd06257 |
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ... |
381-440 |
9.92e-15 |
|
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Pssm-ID: 99751 [Multi-domain] Cd Length: 55 Bit Score: 68.34 E-value: 9.92e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 381 DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQkeeekKFKEVGEAFTILSD 440
Cdd:cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEE-----KFKEINEAYEVLSD 55
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
26-160 |
1.01e-14 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 73.89 E-value: 1.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 26 REAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKC 105
Cdd:COG0457 40 DDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLA 119
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 262206280 106 HLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRK 160
Cdd:COG0457 120 LLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAA 174
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
251-356 |
1.19e-14 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 73.03 E-value: 1.19e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 251 RNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKA 330
Cdd:COG4785 68 ALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDL----AEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYA 143
|
90 100
....*....|....*....|....*.
gi 262206280 331 YLRRAQCYMDTEQYEEAVRDYEKVYQ 356
Cdd:COG4785 144 YLNRGIALYYLGRYELAIADLEKALE 169
|
|
| PRK14281 |
PRK14281 |
chaperone protein DnaJ; Provisional |
379-471 |
3.56e-14 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237657 [Multi-domain] Cd Length: 397 Bit Score: 74.07 E-value: 3.56e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGAS-AEvqkeeeKKFKEVGEAFTILSDPKKKTRYD--------- 448
Cdd:PRK14281 2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKeAE------EHFKEVNEAYEVLSNDDKRRRYDqfghagvgs 75
|
90 100
....*....|....*....|...
gi 262206280 449 SGQDLDEEGMNMGDFDPNNIFKA 471
Cdd:PRK14281 76 SAASGGGPGYGGGGGDFNDIFSA 98
|
|
| PRK14293 |
PRK14293 |
molecular chaperone DnaJ; |
381-463 |
4.69e-14 |
|
molecular chaperone DnaJ;
Pssm-ID: 237663 [Multi-domain] Cd Length: 374 Bit Score: 73.49 E-value: 4.69e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 381 DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD-------SG--- 450
Cdd:PRK14293 4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAE------DRFKEINRAYEVLSDPETRARYDqfgeagvSGaag 77
|
90
....*....|....
gi 262206280 451 -QDLDeegmNMGDF 463
Cdd:PRK14293 78 fPDMG----DMGGF 87
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
2-209 |
4.76e-14 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 74.64 E-value: 4.76e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 2 AAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREA 81
Cdd:COG3914 52 AEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEA 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 82 LGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQQEfknanavmeyekIAETDFEKRDFRKV 161
Cdd:COG3914 132 LAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNN------------LGNALQDLGRLEEA 199
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 262206280 162 VFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTN 209
Cdd:COG3914 200 IAAYRRALELDPDNADAHSNLLFALRQACDWEVYDRFEELLAALARGP 247
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
12-132 |
5.72e-14 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 71.10 E-value: 5.72e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 12 AATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRL 91
Cdd:COG4785 57 ALAAERIDRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALEL 136
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 262206280 92 DDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQA 132
Cdd:COG4785 137 DPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPER 177
|
|
| PTZ00037 |
PTZ00037 |
DnaJ_C chaperone protein; Provisional |
380-469 |
6.02e-14 |
|
DnaJ_C chaperone protein; Provisional
Pssm-ID: 240236 [Multi-domain] Cd Length: 421 Bit Score: 73.70 E-value: 6.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRhsGASAEvqkeeekKFKEVGEAFTILSDPKKKTRYDsgqDLDEEGM- 458
Cdd:PTZ00037 28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK--GGDPE-------KFKEISRAYEVLSDPEKRKIYD---EYGEEGLe 95
|
90
....*....|..
gi 262206280 459 -NMGDFDPNNIF 469
Cdd:PTZ00037 96 gGEQPADASDLF 107
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
28-247 |
7.99e-14 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 73.87 E-value: 7.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 28 AETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYY------------GNRAATLMMLGRFREALGDAQQSVRLDDSF 95
Cdd:COG3914 1 AAAAALLALAALAAAALLAAAAAAELALAAELEAAALAaalglallllaaLAEAAAAALLALAAGEAAAAAAALLLLAAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 96 VRGHLREgkcHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAETdfekrdfrkvvfCMDRALEFAPAC 175
Cdd:COG3914 81 LELAALL---LQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALA------------ALRRALALNPDF 145
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 262206280 176 HRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKAC 247
Cdd:COG3914 146 AEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAH 217
|
|
| PRK14278 |
PRK14278 |
chaperone protein DnaJ; Provisional |
380-457 |
1.11e-13 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237654 [Multi-domain] Cd Length: 378 Bit Score: 72.39 E-value: 1.11e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYDSGQDLDEEG 457
Cdd:PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQ------EKFKEISVAYEVLSDPEKRRIVDLGGDPLESA 74
|
|
| SEC63 |
COG5407 |
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ... |
381-446 |
1.23e-13 |
|
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 444165 [Multi-domain] Cd Length: 61 Bit Score: 65.41 E-value: 1.23e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 262206280 381 DYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSG-ASAEvqkeeeKKFKEVGEAFTILSDPKKKTR 446
Cdd:COG5407 1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGdPKAE------ERFKEINEAYELLSDAEKRAR 61
|
|
| CbpA |
COG2214 |
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription]; |
377-448 |
1.56e-13 |
|
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
Pssm-ID: 441816 [Multi-domain] Cd Length: 91 Bit Score: 66.28 E-value: 1.56e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 262206280 377 SKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHsgasAEVQKEEEKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:COG2214 2 PDLKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRG----GELKALAEELFQRLNEAYEVLSDPERRAEYD 69
|
|
| PLN03088 |
PLN03088 |
SGT1, suppressor of G2 allele of SKP1; Provisional |
253-353 |
2.06e-13 |
|
SGT1, suppressor of G2 allele of SKP1; Provisional
Pssm-ID: 215568 [Multi-domain] Cd Length: 356 Bit Score: 71.36 E-value: 2.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 253 AKALKAKkedGNKAFKEGNYKLAYELYTEALGIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYL 332
Cdd:PLN03088 2 AKDLEDK---AKEAFVDDDFALAVDLYTQAIDLDPNN----AELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYL 74
|
90 100
....*....|....*....|.
gi 262206280 333 RRAQCYMDTEQYEEAVRDYEK 353
Cdd:PLN03088 75 RKGTACMKLEEYQTAKAALEK 95
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
209-356 |
3.62e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 71.95 E-value: 3.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 209 NADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKED-----GNKAFKEGNYKLAYELYTEAL 283
Cdd:COG3914 60 LALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNAEalfnlGNLLLALGRLEEALAALRRAL 139
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 262206280 284 GIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356
Cdd:COG3914 140 ALNPDF----AEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALE 208
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
123-386 |
4.82e-13 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 68.88 E-value: 4.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 123 LELDHKNAQAqqefknanavmeYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDI 202
Cdd:COG0457 1 LELDPDDAEA------------YNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQA 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 203 LRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDhekaciacrNAKALKAKkedGNKAFKEGNYKLAYELYTEA 282
Cdd:COG0457 69 LELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPD---------DAEALYNL---GLALLELGRYDEAIEAYERA 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 283 LGIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKE 362
Cdd:COG0457 137 LELDPDD----ADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLA 212
|
250 260
....*....|....*....|....
gi 262206280 363 HKQLLKNAQLELKKSKRKDYYKIL 386
Cdd:COG0457 213 ILTLAALAELLLLALALLLALRLA 236
|
|
| PRK14286 |
PRK14286 |
chaperone protein DnaJ; Provisional |
380-461 |
8.08e-13 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172774 [Multi-domain] Cd Length: 372 Bit Score: 69.63 E-value: 8.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGasaevQKEEEKKFKEVGEAFTILSDPKKKTRYDSgqdLDEEGMN 459
Cdd:PRK14286 4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKG-----NKESEEKFKEATEAYEILRDPKKRQAYDQ---FGKAGVN 75
|
..
gi 262206280 460 MG 461
Cdd:PRK14286 76 AG 77
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
19-353 |
1.96e-12 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 69.63 E-value: 1.96e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 19 LDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIdMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRG 98
Cdd:TIGR00990 118 LSEEERKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAI-ECKPDPVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKA 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 99 HLREGKCHLSLGNamaacrsFQRALeLDHKNAQAQQEFKNANAVMEYEkiaetdfekRDFRKvvFCMDRALEfapachrf 178
Cdd:TIGR00990 197 LNRRANAYDGLGK-------YADAL-LDLTASCIIDGFRNEQSAQAVE---------RLLKK--FAESKAKE-------- 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 179 kILKAEclamLGRYPEAQSVAS--DILRM--------DSTNADA--------LYVRGLCLYYEDCIEKAVQFFVQALRMA 240
Cdd:TIGR00990 250 -ILETK----PENLPSVTFVGNylQSFRPkprpagleDSNELDEetgngqlqLGLKSPESKADESYEEAARAFEKALDLG 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 241 PDHEKACIACRNAKALKakkedgnkaFKEGNYKLAYELYTEALGIDPNNIKTnaklYCNRGTVNSKLRKLDDAIEDCTNA 320
Cdd:TIGR00990 325 KLGEKEAIALNLRGTFK---------CLKGKHLEALADLSKSIELDPRVTQS----YIKRASMNLELGDPDKAEEDFDKA 391
|
330 340 350
....*....|....*....|....*....|...
gi 262206280 321 VKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEK 353
Cdd:TIGR00990 392 LKLNSEDPDIYYHRAQLHFIKGEFAQAGKDYQK 424
|
|
| PRK14285 |
PRK14285 |
chaperone protein DnaJ; Provisional |
379-448 |
2.71e-12 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172773 [Multi-domain] Cd Length: 365 Bit Score: 68.09 E-value: 2.71e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 379 RKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGasaevQKEEEKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKG-----NKEAESIFKEATEAYEVLIDDNKRAQYD 66
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
33-238 |
3.79e-12 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 66.68 E-value: 3.79e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 33 EQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNA 112
Cdd:COG2956 81 ELAQDYLKAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDY 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 113 MAACRSFQRALELDHKNAQAqqefknanavmeYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRY 192
Cdd:COG2956 161 DEAIEALEKALKLDPDCARA------------LLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDP 228
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 262206280 193 PEAQSVASDILRMDSTNADALYVRGLCLYYEDcIEKAVQFFVQALR 238
Cdd:COG2956 229 EEALELLRKALELDPSDDLLLALADLLERKEG-LEAALALLERQLR 273
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
235-356 |
1.26e-11 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 66.94 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 235 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNniktNAKLYCNRGTVNSKLRKLDDAI 314
Cdd:COG3914 57 AALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPD----NAEALFNLGNLLLALGRLEEAL 132
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 262206280 315 EDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356
Cdd:COG3914 133 AALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALE 174
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
22-206 |
1.41e-11 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 65.14 E-value: 1.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 22 QEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLR 101
Cdd:COG2956 104 ELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARALLL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 102 EGKCHLSLGNAMAACRSFQRALELDHKNAQAqqefknanavmeYEKIAETDFEKRDFRKVVFCMDRALEFAPAcHRFKIL 181
Cdd:COG2956 184 LAELYLEQGDYEEAIAALERALEQDPDYLPA------------LPRLAELYEKLGDPEEALELLRKALELDPS-DDLLLA 250
|
170 180
....*....|....*....|....*
gi 262206280 182 KAECLAMLGRYPEAQSVASDILRMD 206
Cdd:COG2956 251 LADLLERKEGLEAALALLERQLRRH 275
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
28-157 |
2.24e-11 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 63.87 E-value: 2.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 28 AETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHL 107
Cdd:COG0457 76 AEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALE 155
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 262206280 108 SLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKRD 157
Cdd:COG0457 156 KLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQ 205
|
|
| DjlA |
COG1076 |
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones]; |
381-442 |
4.62e-11 |
|
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440694 [Multi-domain] Cd Length: 75 Bit Score: 58.65 E-value: 4.62e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 262206280 381 DYYKILGVDKNASEDEIKKAYRKRALMHHPDRH-SGASAEVQKEEEKKFKEVGEAFTILSDPK 442
Cdd:COG1076 5 DAFELLGLPPDADDAELKRAYRKLQREHHPDRLaAGLPEEEQRLALQKAAAINEAYETLKDPR 67
|
|
| PRK14296 |
PRK14296 |
chaperone protein DnaJ; Provisional |
378-448 |
5.19e-11 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237666 [Multi-domain] Cd Length: 372 Bit Score: 64.20 E-value: 5.19e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 262206280 378 KRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK14296 2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAH------DKMVEINEAADVLLDKDKRKQYD 66
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
28-134 |
6.74e-11 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 60.02 E-value: 6.74e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 28 AETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHL 107
Cdd:COG4235 17 AEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAF 96
|
90 100
....*....|....*....|....*..
gi 262206280 108 SLGNAMAACRSFQRALELDHKNAQAQQ 134
Cdd:COG4235 97 QQGDYAEAIAAWQKLLALLPADAPARL 123
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
26-155 |
1.06e-10 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 59.44 E-value: 1.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 26 REAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKC 105
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 262206280 106 HLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAETDFEK 155
Cdd:COG4783 82 LLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEK 131
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
2-126 |
2.98e-10 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 58.82 E-value: 2.98e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 2 AAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREA 81
Cdd:COG5010 28 EAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEA 107
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 262206280 82 LGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELD 126
Cdd:COG5010 108 KEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTS 152
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
22-129 |
4.33e-10 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 57.89 E-value: 4.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 22 QEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLR 101
Cdd:COG4783 32 ELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLR 111
|
90 100
....*....|....*....|....*...
gi 262206280 102 EGKCHLSLGNAMAACRSFQRALELDHKN 129
Cdd:COG4783 112 LARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| PRK14300 |
PRK14300 |
chaperone protein DnaJ; Provisional |
380-469 |
1.41e-09 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172788 [Multi-domain] Cd Length: 372 Bit Score: 59.64 E-value: 1.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEvqkeeeKKFKEVGEAFTILSDPKKKTRYDS-GQDLDEE-- 456
Cdd:PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAE------KKFKEINAAYDVLKDEQKRAAYDRfGHDAFQNqq 76
|
90
....*....|....*....
gi 262206280 457 ----GMNMGDFDP--NNIF 469
Cdd:PRK14300 77 srggGGNHGGFHPdiNDIF 95
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
210-356 |
2.13e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 55.97 E-value: 2.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 210 ADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDhekaciacrNAKALKAKkedGNKAFKEGNYKLAYELYTEALGIDPNN 289
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDPD---------NPEAFALL---GEILLQLGDLDEAIVLLHEALELDPDE 71
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 262206280 290 iktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356
Cdd:COG4783 72 ----PEARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALE 134
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
35-386 |
2.55e-09 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 59.71 E-value: 2.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 35 GNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNama 114
Cdd:TIGR02917 370 GEAYLALGDFEKAAEYLAKATELDPENAAARTQLGISKLSQGDPSEAIADLETAAQLDPELGRADLLLILSYLRSGQ--- 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 115 acrsFQRALEldhknAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPAcHRFKILKaecLAML----G 190
Cdd:TIGR02917 447 ----FDKALA-----AAKKLEKKQPDNASLHNLLGAIYLGKGDLAKAREAFEKALSIEPD-FFPAAAN---LARIdiqeG 513
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 191 RYPEAQSVASDILRMDSTNADALyvRGLCLYYEDC--IEKAVQFFVQAlrmapdhekaciACRNAKALKAKKEDGNKAFK 268
Cdd:TIGR02917 514 NPDDAIQRFEKVLTIDPKNLRAI--LALAGLYLRTgnEEEAVAWLEKA------------AELNPQEIEPALALAQYYLG 579
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 269 EGNYKLAYELYTEALgidpNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAV 348
Cdd:TIGR02917 580 KGQLKKALAILNEAA----DAAPDSPEAWLMLGRAQLAAGDLNKAVSSFKKLLALQPDSALALLLLADAYAVMKNYAKAI 655
|
330 340 350
....*....|....*....|....*....|....*...
gi 262206280 349 RDYEKVYQTEKTKEHKQLLKnAQLELKKSKRKDYYKIL 386
Cdd:TIGR02917 656 TSLKRALELKPDNTEAQIGL-AQLLLAAKRTESAKKIA 692
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
37-126 |
3.44e-09 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 54.02 E-value: 3.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 37 AYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALgDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAAC 116
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAI-ALEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|
gi 262206280 117 RSFQRALELD 126
Cdd:COG3063 80 AYLERALELD 89
|
|
| PRK10266 |
PRK10266 |
curved DNA-binding protein; |
380-448 |
4.35e-09 |
|
curved DNA-binding protein;
Pssm-ID: 182347 [Multi-domain] Cd Length: 306 Bit Score: 57.91 E-value: 4.35e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQkeeekkFKEVGEAFTILSDPKKKTRYD 448
Cdd:PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEAR------FKEVAEAWEVLSDEQRRAEYD 66
|
|
| PLN03088 |
PLN03088 |
SGT1, suppressor of G2 allele of SKP1; Provisional |
43-150 |
5.34e-09 |
|
SGT1, suppressor of G2 allele of SKP1; Provisional
Pssm-ID: 215568 [Multi-domain] Cd Length: 356 Bit Score: 57.87 E-value: 5.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 43 DYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAAcrsfQRA 122
Cdd:PLN03088 17 DFALAVDLYTQAIDLDPNNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMKLEEYQTA----KAA 92
|
90 100
....*....|....*....|....*...
gi 262206280 123 LELDHKNAQAQQEFKNANAVMEyEKIAE 150
Cdd:PLN03088 93 LEKGASLAPGDSRFTKLIKECD-EKIAE 119
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
28-139 |
7.08e-09 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 56.08 E-value: 7.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 28 AETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHL 107
Cdd:COG4785 107 AEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPERALWLYLAER 186
|
90 100 110
....*....|....*....|....*....|....*
gi 262206280 108 SLGNAMAACR---SFQRALELDHKNAQAQQEFKNA 139
Cdd:COG4785 187 KLDPEKALALlleDWATAYLLQGDTEEARELFKLA 221
|
|
| PRK14288 |
PRK14288 |
molecular chaperone DnaJ; |
382-463 |
1.55e-08 |
|
molecular chaperone DnaJ;
Pssm-ID: 172776 [Multi-domain] Cd Length: 369 Bit Score: 56.62 E-value: 1.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 382 YYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGasaevQKEEEKKFKEVGEAFTILSDPKKKTRYD--SGQDLDEEGMN 459
Cdd:PRK14288 5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAG-----DKEAEEKFKLINEAYGVLSDEKKRALYDryGKKGLNQAGAS 79
|
....
gi 262206280 460 MGDF 463
Cdd:PRK14288 80 QSDF 83
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
8-380 |
2.05e-08 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 57.02 E-value: 2.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 8 DVVMAATEPELLDDQEAkreAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQ 87
Cdd:TIGR02917 108 QVLDELPGKTLLDDEGA---AELLALRGLAYLGLGQLELAQKSYEQALAIDPRSLYAKLGLAQLALAENRFDEARALIDE 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 88 SVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQA----------QQEF----KNANAVME--------- 144
Cdd:TIGR02917 185 VLTADPGNVDALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVllalatilieAGEFeeaeKHADALLKkapnsplah 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 145 YEKiAETDFEKRDFRKVVFCMDRALEFAP---------------------ACHRF-KILKA--------ECLAM----LG 190
Cdd:TIGR02917 265 YLK-ALVDFQKKNYEDARETLQDALKSAPeylpalllagaseyqlgnleqAYQYLnQILKYapnshqarRLLASiqlrLG 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 191 RYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAP-----------------DHEKACIACRNA 253
Cdd:TIGR02917 344 RVDEAIATLSPALGLDPDDPAALSLLGEAYLALGDFEKAAEYLAKATELDPenaaartqlgisklsqgDPSEAIADLETA 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 254 -------------------------KALKA-----KKEDGNKA---------FKEGNYKLAYELYTEALGIDPNNIKTNA 294
Cdd:TIGR02917 424 aqldpelgradlllilsylrsgqfdKALAAakkleKKQPDNASlhnllgaiyLGKGDLAKAREAFEKALSIEPDFFPAAA 503
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 295 KLycnrGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLEL 374
Cdd:TIGR02917 504 NL----ARIDIQEGNPDDAIQRFEKVLTIDPKNLRAILALAGLYLRTGNEEEAVAWLEKAAELNPQEIEPALALAQYYLG 579
|
....*.
gi 262206280 375 KKSKRK 380
Cdd:TIGR02917 580 KGQLKK 585
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
139-289 |
2.39e-08 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 52.89 E-value: 2.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 139 ANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGL 218
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGL 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 262206280 219 CLYYEDCIEKAVQFFVQALRMAPDHEKAciACRNAKALKAKkedgnkafkeGNYKLAYELYTEALGIDPNN 289
Cdd:COG4783 81 ALLKAGDYDEALALLEKALKLDPEHPEA--YLRLARAYRAL----------GRPDEAIAALEKALELDPDD 139
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
2-132 |
7.21e-08 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 53.00 E-value: 7.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 2 AAAAECDVVMAATEPELLDDQEAKR-EAETFKEQGNAYYAKKDYNEAYNYYTkaidMCPKNASYYGNRAATLMMLGRFRE 80
Cdd:COG4785 16 AAAASKAAILLAALLFAAVLALAIAlADLALALAAAALAAAALAAERIDRAL----ALPDLAQLYYERGVAYDSLGDYDL 91
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 262206280 81 ALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQA 132
Cdd:COG4785 92 AIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYA 143
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
114-246 |
8.06e-08 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 51.16 E-value: 8.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 114 AACRSFQRALELDHKNAQAqqefknanavmeYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYP 193
Cdd:COG4235 1 EAIARLRQALAANPNDAEG------------WLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTE 68
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 262206280 194 EAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKA 246
Cdd:COG4235 69 EAEELLERALALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPA 121
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
266-356 |
8.69e-08 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 49.78 E-value: 8.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 266 AFKEGNYKLAYELYTEALGIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEdCTNAVKLDDTYIKAYLRRAQCYMDTEQYE 345
Cdd:COG3063 2 YLKLGDLEEAEEYYEKALELDPDN----ADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYD 76
|
90
....*....|.
gi 262206280 346 EAVRDYEKVYQ 356
Cdd:COG3063 77 EALAYLERALE 87
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
263-411 |
1.32e-07 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 52.81 E-value: 1.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 263 GNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLycnrGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTE 342
Cdd:COG2956 15 GLNYLLNGQPDKAIDLLEEALELDPETVEAHLAL----GNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 343 QYEEAVRDYEKVYQT---------------EKTKEHKQLLKNA-QLELKKSKRKDYYKILGV--DKNASEDEIKKAYRKr 404
Cdd:COG2956 91 LLDRAEELLEKLLELdpddaealrllaeiyEQEGDWEKAIEVLeRLLKLGPENAHAYCELAElyLEQGDYDEAIEALEK- 169
|
....*..
gi 262206280 405 ALMHHPD 411
Cdd:COG2956 170 ALKLDPD 176
|
|
| djlA |
PRK09430 |
co-chaperone DjlA; |
380-411 |
1.41e-07 |
|
co-chaperone DjlA;
Pssm-ID: 236512 [Multi-domain] Cd Length: 267 Bit Score: 52.89 E-value: 1.41e-07
10 20 30
....*....|....*....|....*....|....
gi 262206280 380 KDYYKILGVDKNASEDEIKKAYRKraLM--HHPD 411
Cdd:PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRK--LMseHHPD 231
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
253-354 |
1.50e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 50.58 E-value: 1.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 253 AKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYL 332
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEKALELDPDN----PEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARL 76
|
90 100
....*....|....*....|..
gi 262206280 333 RRAQCYMDTEQYEEAVRDYEKV 354
Cdd:COG4783 77 NLGLALLKAGDYDEALALLEKA 98
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
263-354 |
2.31e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 49.62 E-value: 2.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 263 GNKAFKEGNYKLAYELYTEALGIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTE 342
Cdd:COG4235 24 GRAYLRLGRYDEALAAYEKALRLDPDN----ADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAFQQG 99
|
90
....*....|..
gi 262206280 343 QYEEAVRDYEKV 354
Cdd:COG4235 100 DYAEAIAAWQKL 111
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
24-379 |
9.10e-07 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 51.62 E-value: 9.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 24 AKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNAsyygnraATLMMLGRFREALGDAQQSVRLDDSFVRGHLREG 103
Cdd:TIGR02917 18 GDQSPEELIEAAKSYLQKNKYKAAIIQLKNALQKDPNDA-------EARFLLGKIYLALGDYAAAEKELRKALSLGYPKN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 104 KCHLSLGNAMAACRSFQRALELdhKNAQAQQEFKNANAVMEYEKIAEtdFEKRDFRKVVFCMDRALEFAPACHRFKILKA 183
Cdd:TIGR02917 91 QVLPLLARAYLLQGKFQQVLDE--LPGKTLLDDEGAAELLALRGLAY--LGLGQLELAQKSYEQALAIDPRSLYAKLGLA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 184 ECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIAcrnakalkakkeDG 263
Cdd:TIGR02917 167 QLALAENRFDEARALIDEVLTADPGNVDALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVLLA------------LA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 264 NKAFKEGNYKLAYELYTEALGIDPNNIKTNAKlycnRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKA-YLRRAQCYM--D 340
Cdd:TIGR02917 235 TILIEAGEFEEAEKHADALLKKAPNSPLAHYL----KALVDFQKKNYEDARETLQDALKSAPEYLPAlLLAGASEYQlgN 310
|
330 340 350
....*....|....*....|....*....|....*....
gi 262206280 341 TEQYEEAVRDYEKvyQTEKTKEHKQLLKNAQLELKKSKR 379
Cdd:TIGR02917 311 LEQAYQYLNQILK--YAPNSHQARRLLASIQLRLGRVDE 347
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
160-289 |
9.35e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 48.08 E-value: 9.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 160 KVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRM 239
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 262206280 240 APDHekaciacrnakaLKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNN 289
Cdd:COG4235 81 DPDN------------PEALYLLGLAAFQQGDYAEAIAAWQKLLALLPAD 118
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
209-359 |
1.11e-06 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 48.42 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 209 NADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPN 288
Cdd:COG5010 7 FDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPN 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 262206280 289 NiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEK 359
Cdd:COG5010 87 N----PELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
43-261 |
1.20e-06 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 51.14 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 43 DYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRA 122
Cdd:TIGR00990 380 DPDKAEEDFDKALKLNSEDPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQYKEGSIASSMATFRRC 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 123 LeldhknaqaqQEFKNANAVMEYekIAETDFEKRDFRKVVFCMDRALEFA----PACHRFKILKAECLAML---GRYPEA 195
Cdd:TIGR00990 460 K----------KNFPEAPDVYNY--YGELLLDQNKFDEAIEKFDTAIELEketkPMYMNVLPLINKALALFqwkQDFIEA 527
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 262206280 196 QSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKE 261
Cdd:TIGR00990 528 ENLCEKALIIDPECDIAVATMAQLLLQQGDVDEALKLFERAAELARTEGELVQAISYAEATRTQIQ 593
|
|
| C39_PA2778_fam |
NF033920 |
PA2778 family cysteine peptidase; Members of this family are MEROPS classification C39 family ... |
35-91 |
1.15e-05 |
|
PA2778 family cysteine peptidase; Members of this family are MEROPS classification C39 family cysteine peptidases, a group that includes many processing enzyme for peptide natural products such as lantibiotics and other bacteriocins. This family, more specifically, includes PA2778 as found in Pseudomonas aeruginosa. All members of the defining seed alignment are encoded in the vicinity of a homolog of PA2779 (see HMM NF033919). Note that the C-terminal region consists largely of tetratricopeptide repeats (TPR), so classification using this HMM must be based on comparing the top domain score to the second gathering threshold (GA2).
Pssm-ID: 468245 [Multi-domain] Cd Length: 255 Bit Score: 46.77 E-value: 1.15e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 262206280 35 GNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRL 91
Cdd:NF033920 197 GNAAYAAGDYAAAAAAFRQAVERHPDSAAAWNNLAYALAAQGCTAQARAAAECALAL 253
|
|
| ZUO1 |
COG5269 |
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ... |
373-449 |
2.68e-05 |
|
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 227594 [Multi-domain] Cd Length: 379 Bit Score: 46.56 E-value: 2.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 373 ELKKSKRKDYYKILGVDK---NASEDEIKKAYRKRALMHHPDRhsgASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDS 449
Cdd:COG5269 36 DFKNWKKVDLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDK---TAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDS 112
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
28-135 |
2.74e-05 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 45.77 E-value: 2.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 28 AETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHL 107
Cdd:COG0457 110 AEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALA 189
|
90 100
....*....|....*....|....*...
gi 262206280 108 SLGNAMAACRSFQRALELDHKNAQAQQE 135
Cdd:COG0457 190 LAAAEVLLALLLALEQALRKKLAILTLA 217
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
12-290 |
3.19e-05 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 46.61 E-value: 3.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 12 AATEPELLDDQEAKREAETF--KEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSV 89
Cdd:PRK11447 251 VAAARSQLAEQQKQLADPAFraRAQGLAAVDSGQGGKAIPELQQAVRANPKDSEALGALGQAYSQQGDRARAVAQFEKAL 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 90 RLD-DSFVRGH-------------LREGKCHLSLGNAMAACRSFQRALELDHKNAQAqqefknanavmeyekiaetdfek 155
Cdd:PRK11447 331 ALDpHSSNRDKwesllkvnrywllIQQGDAALKANNLAQAERLYQQARQVDNTDSYA----------------------- 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 156 rdfrkVVFCMDRALefapachrfkilkAEclamlGRYPEAQSVASDILRMDSTNADAlyVRGLC-LYYEDCIEKAVQFfV 234
Cdd:PRK11447 388 -----VLGLGDVAM-------------AR-----KDYAAAERYYQQALRMDPGNTNA--VRGLAnLYRQQSPEKALAF-I 441
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 262206280 235 QALrmaPDHEKACIA-CRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNI 290
Cdd:PRK11447 442 ASL---SASQRRSIDdIERSLQNDRLAQQAEALENQGKWAQAAELQRQRLALDPGSV 495
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
59-133 |
3.82e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 43.46 E-value: 3.82e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 262206280 59 PKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQ 133
Cdd:COG4235 14 PNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEAL 88
|
|
| TPR_11 |
pfam13414 |
TPR repeat; |
35-76 |
4.69e-05 |
|
TPR repeat;
Pssm-ID: 315977 [Multi-domain] Cd Length: 42 Bit Score: 40.53 E-value: 4.69e-05
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 262206280 35 GNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLG 76
Cdd:pfam13414 1 GDAYYEQGKYEEAIEAYKKALKLDPDNPEAYYNLGLAYYKLG 42
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
28-61 |
8.62e-05 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 39.74 E-value: 8.62e-05
10 20 30
....*....|....*....|....*....|....
gi 262206280 28 AETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKN 61
Cdd:smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALELDPNN 34
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
304-448 |
1.33e-04 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 44.78 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 304 NSKLRKLDDAIEDCTnavkLDDTYIKAYLRRAQcymdtEQYEEAVRDYEKVYQTEKTkehkqllknaqLELKKSKrkdYY 383
Cdd:PTZ00341 520 NEEQQTADEHVEEPT----IAEEHVEEEISTAE-----EHIEEPASDVQQDSEAAPT-----------IEIPDTL---FY 576
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 262206280 384 KILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAevqkeeEKKFKEVGEAFTILSDPKKKTRYD 448
Cdd:PTZ00341 577 DILGVGVNADMKEISERYFKLAENYYPPKRSGNEG------FHKFKKINEAYQILGDIDKKKMYN 635
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
275-354 |
2.88e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 40.76 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 275 AYELYTEALGIDPNNiktnAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 354
Cdd:COG4235 2 AIARLRQALAANPND----AEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERA 77
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
28-61 |
3.15e-04 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 38.17 E-value: 3.15e-04
10 20 30
....*....|....*....|....*....|....
gi 262206280 28 AETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKN 61
Cdd:pfam00515 1 AKALYNLGNAYFKLGKYDEALEYYEKALELNPNN 34
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
166-287 |
9.21e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 39.94 E-value: 9.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 166 DRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEK 245
Cdd:COG5010 44 AAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPN 123
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 262206280 246 ACIACRNAKAlkakkedgnkafKEGNYKLAYELYTEALGIDP 287
Cdd:COG5010 124 AYSNLAALLL------------SLGQDDEAKAALQRALGTSP 153
|
|
| BamD |
COG4105 |
Outer membrane protein assembly factor BamD, BamD/ComL family [Cell wall/membrane/envelope ... |
112-376 |
1.03e-03 |
|
Outer membrane protein assembly factor BamD, BamD/ComL family [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443281 [Multi-domain] Cd Length: 254 Bit Score: 41.02 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 112 AMAACRSFQRALeldhKNAQAQQEFKNANAVME---YEKiAETDFEKrdfrkvvfcMDRALEFAPACHRFKILKAECLAM 188
Cdd:COG4105 16 LLAGCSSFKKAL----KSWDAEELYEEAKEALEkgdYEK-AIKLFEE---------LEPRYPGSPYAEQAQLMLAYAYYK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 189 LGRYPEAQSVASDILRM--DSTNAD-ALYVRGLCLYYED--------CIEKAVQFFVQALRMAPDHEKAciacrnakalk 257
Cdd:COG4105 82 QGDYEEAIAAADRFIKLypNSPNADyAYYLRGLSYYEQSpdsdrdqtSTRKAIEAFQELINRYPDSEYA----------- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 258 akkEDGNKAFKEGNYKLA-YELYtealgidpnniktNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDtyikAYLRRAQ 336
Cdd:COG4105 151 ---EDAKKRIDELRDKLArKELE-------------VARYYLKRGAYVAAINRFQNVLEDYPDTPAVEE----ALYLLVE 210
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 262206280 337 CYMDTEQYEEAvRDYEKVYQ-----TEKTKEHKQLLKNAQLELKK 376
Cdd:COG4105 211 AYYALGRYDEA-QDAAAVLGknypdSPYLKDAEKLLKKIGKELKK 254
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
28-97 |
1.11e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 38.23 E-value: 1.11e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 28 AETFKEQGNAYYAKKDYNEAYNYyTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVR 97
Cdd:COG3063 26 ADALNNLGLLLLEQGRYDEAIAL-EKALKLDPNNAEALLNLAELLLELGDYDEALAYLERALELDPSALR 94
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
265-357 |
1.88e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 38.05 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 265 KAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYcNRGTVNSKLRKLDDAIEDCTNAVKL---DDTYIKAYLRRAQCYMDT 341
Cdd:COG1729 2 ALLKAGDYDEAIAAFKAFLKRYPNSPLAPDALY-WLGEAYYALGDYDEAAEAFEKLLKRypdSPKAPDALLKLGLSYLEL 80
|
90
....*....|....*.
gi 262206280 342 EQYEEAVRDYEKVYQT 357
Cdd:COG1729 81 GDYDKARATLEELIKK 96
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
185-288 |
2.10e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 37.46 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 185 CLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFvQALRMAPDhekaciacrNAKALKAKkedGN 264
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIALE-KALKLDPN---------NAEALLNL---AE 67
|
90 100
....*....|....*....|....
gi 262206280 265 KAFKEGNYKLAYELYTEALGIDPN 288
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDPS 91
|
|
| PRK12370 |
PRK12370 |
HilA/EilA family virulence transcriptional regulator; |
104-232 |
2.50e-03 |
|
HilA/EilA family virulence transcriptional regulator;
Pssm-ID: 237080 [Multi-domain] Cd Length: 553 Bit Score: 40.22 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 104 KCHLSLG--------NAM-AACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKrdfrkvvfcmdrALEFAPA 174
Cdd:PRK12370 303 ECYLSMAqmgifdkqNAMiKAKEHAIKATELDHNNPQALGLLGLINTIHSEYIVGSLLFKQ------------ANLLSPI 370
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 262206280 175 CHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQF 232
Cdd:PRK12370 371 SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWITYYHTGIDDAIRL 428
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
294-327 |
3.30e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 35.09 E-value: 3.30e-03
10 20 30
....*....|....*....|....*....|....
gi 262206280 294 AKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTY 327
Cdd:pfam00515 1 AKALYNLGNAYFKLGKYDEALEYYEKALELNPNN 34
|
|
| TPR_17 |
pfam13431 |
Tetratricopeptide repeat; |
50-82 |
3.66e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 433201 [Multi-domain] Cd Length: 34 Bit Score: 35.21 E-value: 3.66e-03
10 20 30
....*....|....*....|....*....|...
gi 262206280 50 YYTKAIDMCPKNASYYGNRAATLMMLGRFREAL 82
Cdd:pfam13431 1 LYLKALELDPNNADAYYNLAVLLLELGQSETAL 33
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
130-241 |
3.95e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 38.02 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 130 AQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTN 209
Cdd:COG5010 42 LAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDN 121
|
90 100 110
....*....|....*....|....*....|..
gi 262206280 210 ADALYVRGLCLYYEDCIEKAVQFFVQALRMAP 241
Cdd:COG5010 122 PNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
37-134 |
5.94e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 36.51 E-value: 5.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 262206280 37 AYYAKKDYNEAYNYYTKAIDMCPK-----NASYYgnRAATLMMLGRFREALGDAQQSVRL--DDSFV-RGHLREGKCHLS 108
Cdd:COG1729 2 ALLKAGDYDEAIAAFKAFLKRYPNsplapDALYW--LGEAYYALGDYDEAAEAFEKLLKRypDSPKApDALLKLGLSYLE 79
|
90 100
....*....|....*....|....*.
gi 262206280 109 LGNAMAACRSFQRALELDHKNAQAQQ 134
Cdd:COG1729 80 LGDYDKARATLEELIKKYPDSEAAKE 105
|
|
| |
