|
Name |
Accession |
Description |
Interval |
E-value |
| rne |
PRK10811 |
ribonuclease E; Reviewed |
120-279 |
5.04e-11 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 64.68 E-value: 5.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 120 EIQTTQPAATEAQTTqPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAM 199
Cdd:PRK10811 862 EEVQVQPVVAEVPVA-AAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAVAQ 940
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 200 E-AQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAME-ALSTEPSATEALSMEPT 277
Cdd:PRK10811 941 EvAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVApAQVPEATVEHNHATAPM 1020
|
..
gi 331284236 278 TK 279
Cdd:PRK10811 1021 TR 1022
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
120-277 |
2.45e-10 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 62.75 E-value: 2.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 120 EIQTTQPAATEAQTTQPVPTEAQTTPLA-ATEAQTTRLTATEAQTTPLAATEAQttPPAATEAQTTQPTGLEAQTTAPAA 198
Cdd:PRK10811 852 DVQVEEQREAEEVQVQPVVAEVPVAAAVePVVSAPVVEAVAEVVEEPVVVAEPQ--PEEVVVVETTHPEVIAAPVTEQPQ 929
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 199 MEAQTTAPAAME--AQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALSMEP 276
Cdd:PRK10811 930 VITESDVAVAQEvaEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEA 1009
|
.
gi 331284236 277 T 277
Cdd:PRK10811 1010 T 1010
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
124-298 |
2.82e-10 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 62.36 E-value: 2.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 124 TQPAATEAQTtQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTglEAQTTAPAAMEAQT 203
Cdd:PRK10811 848 VRPQDVQVEE-QREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV--VVETTHPEVIAAPV 924
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 204 TA-PAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALSMEPTTKRGL 282
Cdd:PRK10811 925 TEqPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPA 1004
|
170
....*....|....*.
gi 331284236 283 FIPFSVSSVTHKGIPM 298
Cdd:PRK10811 1005 QVPEATVEHNHATAPM 1020
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
156-262 |
5.44e-08 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 54.26 E-value: 5.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 156 LTATEAQTTPLaaTEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTAPAAMEAQTTPPAameaQTTQTTAMEAQTTA 235
Cdd:PRK10856 154 LSQNSGQSVPL--DTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPS----QANVDTAATPAPAA 227
|
90 100
....*....|....*....|....*..
gi 331284236 236 PEATEAQTTQPTATEAQTTPLAAMEAL 262
Cdd:PRK10856 228 PATPDGAAPLPTDQAGVSTPAADPNAL 254
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
136-278 |
2.39e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 53.12 E-value: 2.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 136 PVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQ-PTGLEAQTTAPAAMEAQTTAPAAMEAQ-T 213
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVeEPVVVAEPQPEEVVVVETTHPEVIAAPvT 925
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331284236 214 TPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALSMEPTT 278
Cdd:PRK10811 926 EQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAE 990
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
105-218 |
4.09e-07 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 51.57 E-value: 4.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 105 ELANMGNLStdSAAMEIQTTQPAATEAQTTQPVPTeaQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATeAQTT 184
Cdd:PRK10856 142 EITTMADQS--SAELSQNSGQSVPLDTSTTTDPAT--TPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAP-SQAN 216
|
90 100 110
....*....|....*....|....*....|....
gi 331284236 185 QPTGLEAQTTAPAAMEAQTTAPAAMEAQTTPPAA 218
Cdd:PRK10856 217 VDTAATPAPAAPATPDGAAPLPTDQAGVSTPAAD 250
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
166-274 |
7.79e-07 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 50.41 E-value: 7.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 166 LAATEAQTTPPAATEAQTTQPTglEAQTTAPAAMEAQTTAPAAmeaQTTPPAAMEAQTTQTTAMeAQTTAPEATEAQTTQ 245
Cdd:PRK10856 154 LSQNSGQSVPLDTSTTTDPATT--PAPAAPVDTTPTNSQTPAV---ATAPAPAVDPQQNAVVAP-SQANVDTAATPAPAA 227
|
90 100
....*....|....*....|....*....
gi 331284236 246 PTATEAQTTPLAAMEALSTEPSATEALSM 274
Cdd:PRK10856 228 PATPDGAAPLPTDQAGVSTPAADPNALVM 256
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
166-269 |
1.35e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.66 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 166 LAATEAQTTPPAATEAQTTQPTgleAQTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQ 245
Cdd:PRK12270 33 FADYGPGSTAAPTAAAAAAAAA---ASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109
|
90 100 110
....*....|....*....|....*....|..
gi 331284236 246 PTATEAQTTPL---AA-----MEALSTEPSAT 269
Cdd:PRK12270 110 AAAVEDEVTPLrgaAAavaknMDASLEVPTAT 141
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
56-236 |
1.59e-06 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 50.42 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 56 ETEPPEMLRNSTDTTPLTGPGTPESTTVEPAARRSTGLDAGGAVTELTTElanmgnlstdSAAMEIQTTQPAATEAQ-TT 134
Cdd:PRK10811 857 EQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQP----------EEVVVVETTHPEVIAAPvTE 926
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 135 QPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTtqptgleaqTTAPAAMEAQTTAPAAMEAQTT 214
Cdd:PRK10811 927 QPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEV---------VAQPAAPVVAEVAAEVETVTAV 997
|
170 180
....*....|....*....|..
gi 331284236 215 PPAAMEAQTTQTTAMEAQTTAP 236
Cdd:PRK10811 998 EPEVAPAQVPEATVEHNHATAP 1019
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
126-277 |
2.16e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 49.86 E-value: 2.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 126 PAATEAQTTQPVpteAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTA 205
Cdd:PRK07994 361 PAAPLPEPEVPP---QSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 331284236 206 PAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALSMEPT 277
Cdd:PRK07994 438 AKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKT 509
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
117-248 |
2.17e-06 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 50.04 E-value: 2.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 117 AAMEIQTTQPAATEAqtTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAP 196
Cdd:PRK10811 881 PVVSAPVVEAVAEVV--EEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETAD 958
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 331284236 197 AAMEAQTTAPAAMEAQT-TPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTA 248
Cdd:PRK10811 959 IEEAAETAEVVVAEPEVvAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATV 1011
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
135-239 |
3.95e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.12 E-value: 3.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 135 QPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQ--TTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTAPAAMEAQ 212
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPpaAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
|
90 100 110
....*....|....*....|....*....|
gi 331284236 213 TTP---PAAMEAQTtqttaMEAQTTAPEAT 239
Cdd:PRK12270 117 VTPlrgAAAAVAKN-----MDASLEVPTAT 141
|
|
| PRK12727 |
PRK12727 |
flagellar biosynthesis protein FlhF; |
61-275 |
5.68e-06 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 48.45 E-value: 5.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 61 EMLRNSTDTTPLTGPGTPESTTVEPAARRSTGLDAGGAVTELTTELANmgnlSTDSAAMEIQTTQPAATEAQTTQPVPTE 140
Cdd:PRK12727 56 ETARSDTPATAAAPAPAPQAPTKPAAPVHAPLKLSANANMSQRQRVAS----AAEDMIAAMALRQPVSVPRQAPAAAPVR 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 141 AQTTPLAATEAQttrltateaqttplAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTAPAAMEAQTTPPAAME 220
Cdd:PRK12727 132 AASIPSPAAQAL--------------AHAAAVRTAPRQEHALSAVPEQLFADFLTTAPVPRAPVQAPVVAAPAPVPAIAA 197
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 331284236 221 AqtTQTTAMEAQTTAPEATEAQTTQPTATeAQTTPLAAMEALSTEPSATEALSME 275
Cdd:PRK12727 198 A--LAAHAAYAQDDDEQLDDDGFDLDDAL-PQILPPAALPPIVVAPAAPAALAAV 249
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
122-268 |
6.66e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 48.32 E-value: 6.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 122 QTTQPAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEA 201
Cdd:PRK07994 362 AAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKS 441
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 331284236 202 QTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQ--TTPLAAMEALSTEPSA 268
Cdd:PRK07994 442 EPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEpvATPKALKKALEHEKTP 510
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
148-281 |
1.14e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 47.67 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 148 ATEAQTTRLTATE--AQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQ 225
Cdd:PRK07764 370 DERGLLARLERLErrLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAP 449
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 331284236 226 TTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALSMEPTTKRG 281
Cdd:PRK07764 450 AGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAG 505
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
157-259 |
1.25e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.58 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 157 TATEAQTTPlAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTT-- 234
Cdd:PRK12270 42 AAPTAAAAA-AAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTpl 120
|
90 100 110
....*....|....*....|....*....|.
gi 331284236 235 --APEAT----EAQTTQPTATEAQTTPLAAM 259
Cdd:PRK12270 121 rgAAAAVaknmDASLEVPTATSVRAVPAKLL 151
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
141-253 |
2.71e-05 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 46.38 E-value: 2.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 141 AQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTgleaqTTAPAAMEAQTTAPAAMEAQTTPPAAME 220
Cdd:PRK11907 12 ALTLALLTASNPKLAQAEEIVTTTPATSTEAEQTTPVESDATEEADN-----TETPVAATTAAEAPSSSETAETSDPTSE 86
|
90 100 110
....*....|....*....|....*....|...
gi 331284236 221 AQTTqttameAQTTAPEATEAQTTQPTATEAQT 253
Cdd:PRK11907 87 ATDT------TTSEARTVTPAATETSKPVEGQT 113
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
116-228 |
5.29e-05 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 45.49 E-value: 5.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 116 SAAMEIQTTQPAATEAQTTQPVPTEAQTTPLAATE--AQTTRLTATEAQTTPLAATEAQTTPP----AATEAQTTQPTGL 189
Cdd:PHA03269 34 SAATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPdlAQAPTPAASEKFDPAPAPHQAASRAPdpavAPQLAAAPKPDAA 113
|
90 100 110
....*....|....*....|....*....|....*....
gi 331284236 190 EAQTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTA 228
Cdd:PHA03269 114 EAFTSAAQAHEAPADAGTSAASKKPDPAAHTQHSPPPFA 152
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
142-271 |
8.13e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 44.70 E-value: 8.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 142 QTTPLAATEAQTTRLTATEAQTTPLAATEAQTTP---PAA----TEAQTTQPTGLEAQTTAP----AAMEAQTTAPAAME 210
Cdd:PRK08691 373 ENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPvqtASAaampSEGKTAGPVSNQENNDVPpwedAPDEAQTAAGTAQT 452
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 331284236 211 AQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQ-PTATEAQTTPLAamEALSTEPSATEA 271
Cdd:PRK08691 453 SAKSIQTASEAETPPENQVSKNKAADNETDAPLSEvPSENPIQATPND--EAVETETFAHEA 512
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
100-255 |
9.43e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.77 E-value: 9.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 100 TELTteLANMGNLSTDSaameiQTTQPAATEAQTTQPVPTEaqttPLAATEAQTTrlTATEAQTTPLAATEAQTTPPAAT 179
Cdd:PRK14971 352 VELT--LIQLAQLTQKG-----DDASGGRGPKQHIKPVFTQ----PAAAPQPSAA--AAASPSPSQSSAAAQPSAPQSAT 418
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 331284236 180 EAQTTQPTGLEAQTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTP 255
Cdd:PRK14971 419 QPAGTPPTVSVDPPAAVPVNPPSTAPQAVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQK 494
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
113-268 |
1.12e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.47 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 113 STDSAAMEIQTTQPAAT-EAQTTQPVPTEAQTTPLAATEAQTTRLTATEaqttpLAATEAQTTPPAATEAQTTQPTGLEA 191
Cdd:PRK07994 374 SAAPAASAQATAAPTAAvAPPQAPAVPPPPASAPQQAPAVPLPETTSQL-----LAARQQLQRAQGATKAKKSEPAAASR 448
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 331284236 192 QTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSA 268
Cdd:PRK07994 449 ARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLAAEAIERDP 525
|
|
| Agg_substance |
NF033875 |
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ... |
112-241 |
1.21e-04 |
|
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.
Pssm-ID: 411439 [Multi-domain] Cd Length: 1306 Bit Score: 44.32 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 112 LSTDSAAMEIQTTQPAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPL--------AATEAQTTPPAATEAQt 183
Cdd:NF033875 36 LATDNVQAAELDTQPGTTTVQPDNPDPQSGSETPKTAVSEEATVQKDTTSQPTKVeevaseknGAEQSSATPNDTTNAQ- 114
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 331284236 184 tQPTgLEAQTTA---PAAMEAQTTAPAameAQTTPPAAMEAQTTQTTAMEAQTTAPEATEA 241
Cdd:NF033875 115 -QPT-VGAEKSAqeqPVVSPETTNEPL---GQPTEVAPAENEANKSTSIPKEFETPDVDKA 170
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
159-275 |
1.29e-04 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 43.95 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 159 TEAQTTPLAATEAQTTP--------PAATEAQTTQPTGLEAQTTA------------PAAMEAQTTAPAAMEAQTTPP-- 216
Cdd:PHA03269 19 IANLNTNIPIPELHTSAatqkpdpaPAPHQAASRAPDPAVAPTSAasrkpdlaqaptPAASEKFDPAPAPHQAASRAPdp 98
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 331284236 217 --AAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATeAQTTPLAAMEALSTEPSATEALSME 275
Cdd:PHA03269 99 avAPQLAAAPKPDAAEAFTSAAQAHEAPADAGTSA-ASKKPDPAAHTQHSPPPFAYTRSME 158
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
126-238 |
1.49e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.21 E-value: 1.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 126 PAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTA 205
Cdd:PRK07764 392 GAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPA 471
|
90 100 110
....*....|....*....|....*....|...
gi 331284236 206 PAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEA 238
Cdd:PRK07764 472 AAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPA 504
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
126-262 |
1.59e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.93 E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 126 PAATEAQTTQPVPTEAQTtPLAATEAQTTrlTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTA 205
Cdd:PRK14951 371 EAAAPAEKKTPARPEAAA-PAAAPVAQAA--AAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVAL 447
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 331284236 206 PAAMEAQTTP-----PAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTP-LAAMEAL 262
Cdd:PRK14951 448 APAPPAQAAPetvaiPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWHATVQqLAAAEAI 510
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
71-262 |
1.73e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.68 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 71 PLTGPGTPESTTVEPAARRSTGldAGGAVTELTTELANMGNLSTDSAAMEIQTTQPAATEAQTTQPVPTEAQTTPLAATE 150
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVP--APGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATAD 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 151 AQTTRLTATEAQTTPL---AATEAQTTPPAATEAQTTQPTGLEAQTTAPAAM-EAQTTAPAAMEAQTTPPAAMEAQTTQT 226
Cdd:PRK07003 438 RGDDAADGDAPVPAKAnarASADSRCDERDAQPPADSGSASAPASDAPPDAAfEPAPRAAAPSAATPAAVPDARAPAAAS 517
|
170 180 190
....*....|....*....|....*....|....*.
gi 331284236 227 TAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEAL 262
Cdd:PRK07003 518 REDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAAL 553
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
81-266 |
1.91e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 1.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 81 TTVEPA-ARRSTGLDAGGAVTELTTELANMGNLSTDSAAMEIQTTQPAATEAQTTQPVPteAQTTPL------------- 146
Cdd:PRK14951 268 TVVETAdELRLNGLSAASTLEEMAAVLQRMAVLQAVPQAAAAATDPEAAEVARLAALMP--ADETQLlysiclhgraelg 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 147 ------AATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGlEAQTTAPAAMEAqtTAPAAMEAQTTPPAAME 220
Cdd:PRK14951 346 lapdeyAALTMVLLRLLAFKPAAAAEAAAPAEKKTPARPEAAAPAAAP-VAQAAAAPAPAA--APAAAASAPAAPPAAAP 422
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 331284236 221 AQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEP 266
Cdd:PRK14951 423 PAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAP 468
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
128-256 |
2.05e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 128 ATEAQTTQPVPTEAQTTPLAATeaqttrlTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTAPA 207
Cdd:PRK14951 367 AAAAEAAAPAEKKTPARPEAAA-------PAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPA 439
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 331284236 208 AMEAQTTPPAAMEAQTTQTTAMEAQTTAPE-----ATEAQTTQPTATEAQTTPL 256
Cdd:PRK14951 440 AAPAAVALAPAPPAQAAPETVAIPVRVAPEpavasAAPAPAAAPAAARLTPTEE 493
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
117-231 |
2.34e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.33 E-value: 2.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 117 AAMEIQTTQPAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQttpPAATEAQTTQPTGLEAQTTAP 196
Cdd:PRK12323 378 AAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAL---AAARQASARGPGGAPAPAPAP 454
|
90 100 110
....*....|....*....|....*....|....*
gi 331284236 197 AAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTAMEA 231
Cdd:PRK12323 455 AAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAP 489
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
125-276 |
3.04e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.91 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 125 QPAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAqTTAPAAMEAQTT 204
Cdd:PRK07003 372 VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR-GDDAADGDAPVP 450
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 331284236 205 APAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALSMEP 276
Cdd:PRK07003 451 AKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAP 522
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
73-230 |
4.18e-04 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 42.04 E-value: 4.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 73 TGPGTPESTTVEPAARRSTGLDAggaVTELTTELANMGNLSTDSaameIQTTQPAATEAQTTQPVPTEAQTTPLAATEA- 151
Cdd:PRK13335 18 TGAITVTTQSVKAEKIQSTKVDK---VPTLKAERLAMINITAGA----NSATTQAANTRQERTPKLEKAPNTNEEKTSAs 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 152 ---QTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTgleAQTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTA 228
Cdd:PRK13335 91 kieKISQPKQEEQKSLNISATPAPKQEQSQTTTESTTPK---TKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPK 167
|
..
gi 331284236 229 ME 230
Cdd:PRK13335 168 YE 169
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
90-181 |
4.99e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 41.94 E-value: 4.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 90 STGLDAGGAVTELTTE--LANMGNLSTDSAAMEIQTTQPAATEAQTTQPVPTeAQTTPLAATEAQTTRLTATEAQTTPLA 167
Cdd:PRK10856 161 SVPLDTSTTTDPATTPapAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAP-SQANVDTAATPAPAAPATPDGAAPLPT 239
|
90
....*....|....
gi 331284236 168 ATEAQTTPPAATEA 181
Cdd:PRK10856 240 DQAGVSTPAADPNA 253
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
123-213 |
5.73e-04 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 42.15 E-value: 5.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 123 TTQPAATEAQTTQPVPTeaqtTPLAATEAQTTRLTATEAQT---TPLAATEAQTTPPAATEAQTTQPTGLEAQTT---AP 196
Cdd:PRK11907 21 SNPKLAQAEEIVTTTPA----TSTEAEQTTPVESDATEEADnteTPVAATTAAEAPSSSETAETSDPTSEATDTTtseAR 96
|
90
....*....|....*..
gi 331284236 197 AAMEAQTTAPAAMEAQT 213
Cdd:PRK11907 97 TVTPAATETSKPVEGQT 113
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
102-184 |
9.35e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 41.17 E-value: 9.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 102 LTTELANMGNLSTDSAAMEIQTTQPAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEA 181
Cdd:PRK10856 164 LDTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAG 243
|
...
gi 331284236 182 QTT 184
Cdd:PRK10856 244 VST 246
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
135-271 |
1.13e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 135 QPVPTEAQTTPlaATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMeaqTTAPAAMeaqtt 214
Cdd:PRK12323 364 RPGQSGGGAGP--ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARR---SPAPEAL----- 433
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 331284236 215 pPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEA 271
Cdd:PRK12323 434 -AAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAP 489
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
62-251 |
1.35e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.99 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 62 MLRNSTDTTPLTGPGTPESTTVEPAARRSTGLDAGGAVTELTTELANMGnlstdSAAMEIQTTQPAATEAQTTQPVPTEA 141
Cdd:PRK07003 355 MLAFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVT-----GAAGAALAPKAAAAAAATRAEAPPAA 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 142 QTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQP-TGLEAQTTAPAAMEAQTTAPAAMEAQTTPPAAME 220
Cdd:PRK07003 430 PAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSgSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPD 509
|
170 180 190
....*....|....*....|....*....|.
gi 331284236 221 AQTTQTTAMEAQTTAPEATEAQTTQPTATEA 251
Cdd:PRK07003 510 ARAPAAASREDAPAAAAPPAPEARPPTPAAA 540
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
55-276 |
1.42e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.08 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 55 PETEPPEMLRNS-TDTTPLTGPGTPESTTVEPAARRS-TGLDAGGAVTELTTELANMGNLSTDSAAMEIQTTQPAAT--- 129
Cdd:PHA03247 2708 PEPAPHALVSATpLPPGPAAARQASPALPAAPAPPAVpAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTrpa 2787
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 130 -----EAQTTQPVPTEAQTTPLAAT-EAQTTRLTATEAQTTPLAATEAQTTPPAATE-AQTTQPTGLEAQTTAPAAMEAQ 202
Cdd:PHA03247 2788 vaslsESRESLPSPWDPADPPAAVLaPAAALPPAASPAGPLPPPTSAQPTAPPPPPGpPPPSLPLGGSVAPGGDVRRRPP 2867
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331284236 203 TTAPAAMEA-QTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALSMEP 276
Cdd:PHA03247 2868 SRSPAAKPAaPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPP 2942
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
123-249 |
2.12e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 40.03 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 123 TTQPAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPlAATEAQTTPPAATEAQTTQPTglEAQTTAPAAMEAQ 202
Cdd:pfam05539 185 SHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTS-SNPEPQTEPPPSQRGPSGSPQ--HPPSTTSQDQSTT 261
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 331284236 203 TTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTAT 249
Cdd:pfam05539 262 GDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPRPTAT 308
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
149-277 |
2.27e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 40.10 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 149 TEAQTTRLTATEAQTTplAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAME--AQTTAPAAMEAQTTPPAAMEAQTTQT 226
Cdd:PHA03269 19 IANLNTNIPIPELHTS--AATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPdlAQAPTPAASEKFDPAPAPHQAASRAP 96
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 331284236 227 TAMEAQTTA----PEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALSMEPT 277
Cdd:PHA03269 97 DPAVAPQLAaapkPDAAEAFTSAAQAHEAPADAGTSAASKKPDPAAHTQHSPPPF 151
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
115-280 |
2.73e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 39.96 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 115 DSAAMEIQTTQPAATEAQTTQPVPTEAQTTPLAATE-AQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGlEAQT 193
Cdd:PRK13108 293 DEALEREPAELAAAAVASAASAVGPVGPGEPNQPDDvAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETS-EADI 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 194 TAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALS 273
Cdd:PRK13108 372 EREQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEPDGIRRQD 451
|
....*..
gi 331284236 274 MEPTTKR 280
Cdd:PRK13108 452 DFSSRRR 458
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
126-218 |
2.78e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.97 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 126 PAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQT-T 204
Cdd:PRK07764 412 PAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPApA 491
|
90
....*....|....
gi 331284236 205 APAAMEAQTTPPAA 218
Cdd:PRK07764 492 AAPAAPAAPAAPAG 505
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
128-241 |
3.60e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 39.47 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 128 ATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAA-TEAQTTQPTGLEAQTTAPAAMEAQTTAP 206
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARrSPAPEALAAARQASARGPGGAPAPAPAP 454
|
90 100 110
....*....|....*....|....*....|....*
gi 331284236 207 AAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEA 241
Cdd:PRK12323 455 AAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAP 489
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
122-271 |
3.79e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.58 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 122 QTTQPAATEA--QTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAM 199
Cdd:PRK07764 611 EAARPAAPAApaAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAP 690
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 331284236 200 EAQTTAPAAMEAQTTPPAAMEAQ-----TTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEA 271
Cdd:PRK07764 691 AAPAGAAPAQPAPAPAATPPAGQaddpaAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPA 767
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
104-251 |
4.35e-03 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 39.01 E-value: 4.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 104 TELANMGNLSTDSAAMEIQTTQPAATEAQTTQPVP-TEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQT--------- 173
Cdd:PRK13914 131 TGFVNGKYLTDKVTSTPVAPTQEVKKETTTQQAAPaAETKTEVKQTTQATTPAPKVAETKETPVVDQNATThavksgdti 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 174 -----------------TPPAATEAQTTQPTGLE--AQTTAPAAmEAQTTAPAAmEAQTTPPAAMEAQTTQTTAMEAQTT 234
Cdd:PRK13914 211 walsvkygvsvqdimswNNLSSSSIYVGQKLAIKqtANTATPKA-EVKTEAPAA-EKQAAPVVKENTNTNTATTEKKETT 288
|
170
....*....|....*..
gi 331284236 235 apeaTEAQTTQPTATEA 251
Cdd:PRK13914 289 ----TQQQTAPKAPTEA 301
|
|
| motB |
PRK05996 |
MotB family protein; |
136-250 |
4.81e-03 |
|
MotB family protein;
Pssm-ID: 235665 [Multi-domain] Cd Length: 423 Bit Score: 38.91 E-value: 4.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 136 PVPTEAQTTPLAATEAQTTrltATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTAPAAMEAQTTP 215
Cdd:PRK05996 191 EVTTAGDLLPPGQAREQAQ---GAKSATAAPATVPQAAPLPQAQPKKAATEEELIADAKKAATGEPAANAAKAAKPEPMP 267
|
90 100 110
....*....|....*....|....*....|....*
gi 331284236 216 PAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATE 250
Cdd:PRK05996 268 DDQQKEAEQLQAAIAQAIGGVAGKLAEGVTVTPVE 302
|
|
| PRK11907 |
PRK11907 |
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
155-265 |
5.25e-03 |
|
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 39.07 E-value: 5.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 155 RLTATEAQTTPLAATEAQTTPPAATEAQTTQP-TGLEAQTTAPAAMEAQTTAPAAmeaqTTPPAAmeaqttqTTAMEAqT 233
Cdd:PRK11907 5 YFSKSAVALTLALLTASNPKLAQAEEIVTTTPaTSTEAEQTTPVESDATEEADNT----ETPVAA-------TTAAEA-P 72
|
90 100 110
....*....|....*....|....*....|..
gi 331284236 234 TAPEATEAQTTQPTATEAQTTPLAAMEALSTE 265
Cdd:PRK11907 73 SSSETAETSDPTSEATDTTTSEARTVTPAATE 104
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
122-235 |
5.27e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.20 E-value: 5.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 122 QTTQPAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEA 201
Cdd:PRK07764 398 APSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPT 477
|
90 100 110
....*....|....*....|....*....|....
gi 331284236 202 QTTAPAAMEAQttPPAAMEAQTTQTTAMEAQTTA 235
Cdd:PRK07764 478 AAPAPAPPAAP--APAAAPAAPAAPAAPAGADDA 509
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
125-258 |
6.23e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 38.89 E-value: 6.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 125 QPAATEAQTTQPV---PTEAQTTPLAATEAQTTRLTATEAQttPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEA 201
Cdd:PHA03378 675 QPSPTGANTMLPIqwaPGTMQPPPRAPTPMRPPAAPPGRAQ--RPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPG 752
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 331284236 202 QTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTA---PEATEAQTTQPTA--TEAQTTPLAA 258
Cdd:PHA03378 753 RARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPqqrPRGAPTPQPPPQAgpTSMQLMPRAA 814
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
126-271 |
7.58e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 38.43 E-value: 7.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 126 PAA--TEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQT 203
Cdd:PRK07764 365 PSAsdDERGLLARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSP 444
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 331284236 204 TAPAAMEAQTTPPAAMEAQTTQTTameAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEA 271
Cdd:PRK07764 445 AGNAPAGGAPSPPPAAAPSAQPAP---APAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDA 509
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
125-276 |
8.48e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 38.43 E-value: 8.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 125 QPAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATEAQTTPLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAqTT 204
Cdd:PRK07764 607 GPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPP-AP 685
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 331284236 205 APAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMeaLSTEPSATEALSMEP 276
Cdd:PRK07764 686 APAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVP--LPPEPDDPPDPAGAP 755
|
|
| NDFIP2 |
cd22306 |
NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, ... |
180-270 |
9.62e-03 |
|
NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, developmentally down-regulated protein 4)-family interacting proteins (NDFIPs) are adaptor proteins that recruit NEDD4 E3 ligases to specific substrate proteins, which leads to the ubiquitylation and subsequent degradation of these proteins. They also act as activators of the E3 ligase activity by releasing NEDD4 ligase from its auto-inhibitory conformation. NDFIP2 may play a role in protein trafficking.
Pssm-ID: 412070 [Multi-domain] Cd Length: 229 Bit Score: 37.56 E-value: 9.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 180 EAQTTQPTGLEAQTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTT---APEATEAQTTQPTATEAQTTPL 256
Cdd:cd22306 10 EDDPSESSASEQPSTSTQVQESSSNPAPETDAPPPPYSSITAGATAAPGTETQSEfypVPPPYSVATSLPTYDEAEKAKA 89
|
90
....*....|....
gi 331284236 257 AAMEALSTEPSATE 270
Cdd:cd22306 90 AAMAAAAAEVAQRE 103
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
165-280 |
9.84e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 38.29 E-value: 9.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331284236 165 PLAATEAQTTPPAATEAQTTQPTGleAQTTAPAAMEAQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTT 244
Cdd:PRK07003 377 AGAVPAPGARAAAAVGASAVPAVT--AVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKAN 454
|
90 100 110
....*....|....*....|....*....|....*.
gi 331284236 245 QPTATEAQTTPLAAMEALSTEPSATEALSMEPTTKR 280
Cdd:PRK07003 455 ARASADSRCDERDAQPPADSGSASAPASDAPPDAAF 490
|
|
|