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Conserved domains on  [gi|42544177|ref|NP_001868|]
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complement receptor type 2 isoform 2 precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 367-657 2.62e-34

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 132.47  E-value: 2.62e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   367 DRYTYNDTVIFACMFGFTLK--GSKQIRCNAQGtWEPSAPVCEKECQAPPNILNGQKEdrhMVRFDPGTSIKYSCNPGYV 444
Cdd:PHA02927   42 ANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTG-WTLFNQCIKRRCPSPRDIDNGQLD---IGGVDFGSSITYSCNSGYQ 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   445 LVGEESIQC----TSEGVWTPPVPqckvaaceatgrqlltkpqhqfvrpdvnsscgegyklsgsvyqecqgtipwfmeir 520
Cdd:PHA02927  118 LIGESKSYCelgsTGSMVWNPEAP-------------------------------------------------------- 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   521 LCKEITCPPPPVIYNGAHTGssLEDF-PYGTTVTYTCNPGpergveFSLIGESTIRCTSndqerGTWSGPaPLCKLslla 599
Cdd:PHA02927  142 ICESVKCQSPPSISNGRHNG--YEDFyTDGSVVTYSCNSG------YSLIGNSGVLCSG-----GEWSDP-PTCQI---- 203

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177   600 VQCSHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVC 657
Cdd:PHA02927  204 VKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 176-406 4.75e-32

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 125.92  E-value: 4.75e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   176 GLSVTYSCESGYLL--VGEKIINCLSSGkWSAVPpTCEEARCKSLGRFPNGKVKEPPIlRVGVTANFFCDEGYRLQGPPS 253
Cdd:PHA02927   47 GDTIEYLCLPGYRKqkMGPIYAKCTGTG-WTLFN-QCIKRRCPSPRDIDNGQLDIGGV-DFGSSITYSCNSGYQLIGESK 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   254 SRCVIAGQG-VAWT-KMPVCEEIFCPSPPPILNGRHIGNSlANVSYGSIVTYTCDPdpeegvNFILIGESTLRCTvdsqk 331
Cdd:PHA02927  124 SYCELGSTGsMVWNpEAPICESVKCQSPPSISNGRHNGYE-DFYTDGSVVTYSCNS------GYSLIGNSGVLCS----- 191

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 42544177   332 TGTWSGPaPRCELstsaVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVC 406
Cdd:PHA02927  192 GGEWSDP-PTCQI----VKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 617-845 3.18e-27

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 112.05  E-value: 3.18e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   617 EAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEKETCQHVRQ------SLQELPAGSRVelvNTSCQDGYQ 690
Cdd:PHA02927   41 NANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQCIKRRCPSPRDidngqlDIGGVDFGSSI---TYSCNSGYQ 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   691 LTGHAYQMCQDAENG--IWFKKIPLCKVIHCHPPPVIVNGKHTGMmaENFLY-GNEVSYECDQGFYLLGEKKLQCRSdsk 767
Cdd:PHA02927  118 LIGESKSYCELGSTGsmVWNPEAPICESVKCQSPPSISNGRHNGY--EDFYTdGSVVTYSCNSGYSLIGNSGVLCSG--- 192

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177   768 ghGSWSGPsPQClrspPVTRCPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWVPGVPTCIK 845
Cdd:PHA02927  193 --GEWSDP-PTC----QIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKCVR 263
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 778-968 4.25e-20

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 91.25  E-value: 4.25e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   778 QCLRSppvtRCPNPEVKHGYKLNKTHSAYShNDIVYvDCNPGFIMNGSRVIRCHTDNT----WVPGVPTCikkAFIGCPP 853
Cdd:PHA02927   80 QCIKR----RCPSPRDIDNGQLDIGGVDFG-SSITY-SCNSGYQLIGESKSYCELGSTgsmvWNPEAPIC---ESVKCQS 150

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   854 PPKTPNGNHTGGNiARFSPGMSILYSCDQGYLLVGEALLLCTHeGTWSQPaPHCKEVNCSSPADMDG-IQKGLepRKMYQ 932
Cdd:PHA02927  151 PPSISNGRHNGYE-DFYTDGSVVTYSCNSGYSLIGNSGVLCSG-GEWSDP-PTCQIVKCPHPTISNGyLSSGF--KRSYS 225

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 42544177   933 YGAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAVC 968
Cdd:PHA02927  226 YNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02927 super family cl33700
secreted complement-binding protein; Provisional
 15-147 4.41e-17

secreted complement-binding protein; Provisional


The actual alignment was detected with superfamily member PHA02927:

Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 82.39  E-value: 4.41e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177    15 APGVLGISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCitkdkVDGTWDKPaPKCEYFnkysSCPEP 94
Cdd:PHA02927  140 APICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-----SGGEWSDP-PTCQIV----KCPHP 209

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 42544177    95 IVPGGYKIRG-STPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPtRLPTCV 147
Cdd:PHA02927  210 TISNGYLSSGfKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQP-ELPKCV 262
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 367-657 2.62e-34

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 132.47  E-value: 2.62e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   367 DRYTYNDTVIFACMFGFTLK--GSKQIRCNAQGtWEPSAPVCEKECQAPPNILNGQKEdrhMVRFDPGTSIKYSCNPGYV 444
Cdd:PHA02927   42 ANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTG-WTLFNQCIKRRCPSPRDIDNGQLD---IGGVDFGSSITYSCNSGYQ 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   445 LVGEESIQC----TSEGVWTPPVPqckvaaceatgrqlltkpqhqfvrpdvnsscgegyklsgsvyqecqgtipwfmeir 520
Cdd:PHA02927  118 LIGESKSYCelgsTGSMVWNPEAP-------------------------------------------------------- 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   521 LCKEITCPPPPVIYNGAHTGssLEDF-PYGTTVTYTCNPGpergveFSLIGESTIRCTSndqerGTWSGPaPLCKLslla 599
Cdd:PHA02927  142 ICESVKCQSPPSISNGRHNG--YEDFyTDGSVVTYSCNSG------YSLIGNSGVLCSG-----GEWSDP-PTCQI---- 203

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177   600 VQCSHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVC 657
Cdd:PHA02927  204 VKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 176-406 4.75e-32

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 125.92  E-value: 4.75e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   176 GLSVTYSCESGYLL--VGEKIINCLSSGkWSAVPpTCEEARCKSLGRFPNGKVKEPPIlRVGVTANFFCDEGYRLQGPPS 253
Cdd:PHA02927   47 GDTIEYLCLPGYRKqkMGPIYAKCTGTG-WTLFN-QCIKRRCPSPRDIDNGQLDIGGV-DFGSSITYSCNSGYQLIGESK 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   254 SRCVIAGQG-VAWT-KMPVCEEIFCPSPPPILNGRHIGNSlANVSYGSIVTYTCDPdpeegvNFILIGESTLRCTvdsqk 331
Cdd:PHA02927  124 SYCELGSTGsMVWNpEAPICESVKCQSPPSISNGRHNGYE-DFYTDGSVVTYSCNS------GYSLIGNSGVLCS----- 191

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 42544177   332 TGTWSGPaPRCELstsaVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVC 406
Cdd:PHA02927  192 GGEWSDP-PTCQI----VKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 617-845 3.18e-27

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 112.05  E-value: 3.18e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   617 EAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEKETCQHVRQ------SLQELPAGSRVelvNTSCQDGYQ 690
Cdd:PHA02927   41 NANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQCIKRRCPSPRDidngqlDIGGVDFGSSI---TYSCNSGYQ 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   691 LTGHAYQMCQDAENG--IWFKKIPLCKVIHCHPPPVIVNGKHTGMmaENFLY-GNEVSYECDQGFYLLGEKKLQCRSdsk 767
Cdd:PHA02927  118 LIGESKSYCELGSTGsmVWNPEAPICESVKCQSPPSISNGRHNGY--EDFYTdGSVVTYSCNSGYSLIGNSGVLCSG--- 192

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177   768 ghGSWSGPsPQClrspPVTRCPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWVPGVPTCIK 845
Cdd:PHA02927  193 --GEWSDP-PTC----QIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKCVR 263
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 778-968 4.25e-20

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 91.25  E-value: 4.25e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   778 QCLRSppvtRCPNPEVKHGYKLNKTHSAYShNDIVYvDCNPGFIMNGSRVIRCHTDNT----WVPGVPTCikkAFIGCPP 853
Cdd:PHA02927   80 QCIKR----RCPSPRDIDNGQLDIGGVDFG-SSITY-SCNSGYQLIGESKSYCELGSTgsmvWNPEAPIC---ESVKCQS 150

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   854 PPKTPNGNHTGGNiARFSPGMSILYSCDQGYLLVGEALLLCTHeGTWSQPaPHCKEVNCSSPADMDG-IQKGLepRKMYQ 932
Cdd:PHA02927  151 PPSISNGRHNGYE-DFYTDGSVVTYSCNSGYSLIGNSGVLCSG-GEWSDP-PTCQIVKCPHPTISNGyLSSGF--KRSYS 225

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 42544177   933 YGAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAVC 968
Cdd:PHA02927  226 YNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 15-147 4.41e-17

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 82.39  E-value: 4.41e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177    15 APGVLGISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCitkdkVDGTWDKPaPKCEYFnkysSCPEP 94
Cdd:PHA02927  140 APICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-----SGGEWSDP-PTCQIV----KCPHP 209

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 42544177    95 IVPGGYKIRG-STPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPtRLPTCV 147
Cdd:PHA02927  210 TISNGYLSSGfKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQP-ELPKCV 262
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 410-467 4.70e-14

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 67.49  E-value: 4.70e-14
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177  410 CQAPPNILNGQKEDRhMVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQCK 467
Cdd:cd00033    1 CPPPPVPENGTVTGS-KGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 410-466 9.13e-13

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 63.70  E-value: 9.13e-13
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177     410 CQAPPNILNGQKEDRHmVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQC 466
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 154-211 3.42e-12

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 62.10  E-value: 3.42e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177  154 CPALPMIHNGHHTSENvGSIAPGLSVTYSCESGYLLVGEKIINCLSSGKWSAVPPTCE 211
Cdd:cd00033    1 CPPPPVPENGTVTGSK-GSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 719-779 4.72e-12

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 61.71  E-value: 4.72e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42544177  719 CHPPPVIVNGKHTGMMaENFLYGNEVSYECDQGFYLLGEKKLQCRSDskghGSWSGPSPQC 779
Cdd:cd00033    1 CPPPPVPENGTVTGSK-GSYSYGSTVTYSCNEGYTLVGSSTITCTEN----GGWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 851-908 4.74e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 59.01  E-value: 4.74e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177  851 CPPPPKTPNGNHTGGNiARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHCK 908
Cdd:cd00033    1 CPPPPVPENGTVTGSK-GSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 23-83 6.36e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 58.63  E-value: 6.36e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42544177   23 CGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCItkdkVDGTWDKPAPKCE 83
Cdd:cd00033    1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCT----ENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 719-779 8.10e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 58.31  E-value: 8.10e-11
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42544177     719 CHPPPVIVNGKHTGMmAENFLYGNEVSYECDQGFYLLGEKKLQCRSDskghGSWSGPSPQC 779
Cdd:smart00032    1 CPPPPDIENGTVTSS-SGTYSYGDTVTYSCDPGYTLIGSSTITCLEN----GTWSPPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 154-210 9.47e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 57.92  E-value: 9.47e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177     154 CPALPMIHNGHHTSENvGSIAPGLSVTYSCESGYLLVGEKIINCLSSGKWSAVPPTC 210
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
851-907 1.23e-10

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 57.89  E-value: 1.23e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177    851 CPPPPKTPNGNHTGGNiARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHC 907
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 23-82 1.92e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 57.15  E-value: 1.92e-10
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177      23 CGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITkdkvDGTWDKPAPKC 82
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLE----NGTWSPPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 851-907 3.45e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 56.38  E-value: 3.45e-10
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177     851 CPPPPKTPNGNHTGGNiARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHC 907
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
410-466 1.01e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.50  E-value: 1.01e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177    410 CQAPPNILNGQKEDRHmVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQC 466
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
719-779 2.51e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 51.35  E-value: 2.51e-08
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42544177    719 CHPPPVIVNGKHTGMMaENFLYGNEVSYECDQGFYLLGEKKLQCRsdskGHGSWSGPSPQC 779
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPGYRLVGSPTITCQ----EDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
276-342 3.60e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 47.88  E-value: 3.60e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177    276 CPSPPPILNGrHIGNSLANVSYGSIVTYTCDPdpeegvNFILIGESTLRCtvdsQKTGTWSGPAPRC 342
Cdd:pfam00084    1 CPPPPDIPNG-KVSATKNEYNYGASVSYECDP------GYRLVGSPTITC----QEDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
23-82 6.42e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 47.11  E-value: 6.42e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177     23 CGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITkdkvDGTWDKPAPKC 82
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQE----DGTWSPPFPEC 56
 
Name Accession Description Interval E-value
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 367-657 2.62e-34

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 132.47  E-value: 2.62e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   367 DRYTYNDTVIFACMFGFTLK--GSKQIRCNAQGtWEPSAPVCEKECQAPPNILNGQKEdrhMVRFDPGTSIKYSCNPGYV 444
Cdd:PHA02927   42 ANYNIGDTIEYLCLPGYRKQkmGPIYAKCTGTG-WTLFNQCIKRRCPSPRDIDNGQLD---IGGVDFGSSITYSCNSGYQ 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   445 LVGEESIQC----TSEGVWTPPVPqckvaaceatgrqlltkpqhqfvrpdvnsscgegyklsgsvyqecqgtipwfmeir 520
Cdd:PHA02927  118 LIGESKSYCelgsTGSMVWNPEAP-------------------------------------------------------- 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   521 LCKEITCPPPPVIYNGAHTGssLEDF-PYGTTVTYTCNPGpergveFSLIGESTIRCTSndqerGTWSGPaPLCKLslla 599
Cdd:PHA02927  142 ICESVKCQSPPSISNGRHNG--YEDFyTDGSVVTYSCNSG------YSLIGNSGVLCSG-----GEWSDP-PTCQI---- 203

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177   600 VQCSHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVC 657
Cdd:PHA02927  204 VKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 176-406 4.75e-32

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 125.92  E-value: 4.75e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   176 GLSVTYSCESGYLL--VGEKIINCLSSGkWSAVPpTCEEARCKSLGRFPNGKVKEPPIlRVGVTANFFCDEGYRLQGPPS 253
Cdd:PHA02927   47 GDTIEYLCLPGYRKqkMGPIYAKCTGTG-WTLFN-QCIKRRCPSPRDIDNGQLDIGGV-DFGSSITYSCNSGYQLIGESK 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   254 SRCVIAGQG-VAWT-KMPVCEEIFCPSPPPILNGRHIGNSlANVSYGSIVTYTCDPdpeegvNFILIGESTLRCTvdsqk 331
Cdd:PHA02927  124 SYCELGSTGsMVWNpEAPICESVKCQSPPSISNGRHNGYE-DFYTDGSVVTYSCNS------GYSLIGNSGVLCS----- 191

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 42544177   332 TGTWSGPaPRCELstsaVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVC 406
Cdd:PHA02927  192 GGEWSDP-PTCQI----VKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 617-845 3.18e-27

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 112.05  E-value: 3.18e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   617 EAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEKETCQHVRQ------SLQELPAGSRVelvNTSCQDGYQ 690
Cdd:PHA02927   41 NANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQCIKRRCPSPRDidngqlDIGGVDFGSSI---TYSCNSGYQ 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   691 LTGHAYQMCQDAENG--IWFKKIPLCKVIHCHPPPVIVNGKHTGMmaENFLY-GNEVSYECDQGFYLLGEKKLQCRSdsk 767
Cdd:PHA02927  118 LIGESKSYCELGSTGsmVWNPEAPICESVKCQSPPSISNGRHNGY--EDFYTdGSVVTYSCNSGYSLIGNSGVLCSG--- 192

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177   768 ghGSWSGPsPQClrspPVTRCPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWVPGVPTCIK 845
Cdd:PHA02927  193 --GEWSDP-PTC----QIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKCVR 263
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 778-968 4.25e-20

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 91.25  E-value: 4.25e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   778 QCLRSppvtRCPNPEVKHGYKLNKTHSAYShNDIVYvDCNPGFIMNGSRVIRCHTDNT----WVPGVPTCikkAFIGCPP 853
Cdd:PHA02927   80 QCIKR----RCPSPRDIDNGQLDIGGVDFG-SSITY-SCNSGYQLIGESKSYCELGSTgsmvWNPEAPIC---ESVKCQS 150

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   854 PPKTPNGNHTGGNiARFSPGMSILYSCDQGYLLVGEALLLCTHeGTWSQPaPHCKEVNCSSPADMDG-IQKGLepRKMYQ 932
Cdd:PHA02927  151 PPSISNGRHNGYE-DFYTDGSVVTYSCNSGYSLIGNSGVLCSG-GEWSDP-PTCQIVKCPHPTISNGyLSSGF--KRSYS 225

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 42544177   933 YGAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAVC 968
Cdd:PHA02927  226 YNDNVDFKCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02639 PHA02639
EEV host range protein; Provisional
 679-845 4.73e-18

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 85.87  E-value: 4.73e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   679 ELVNTSCQDGYQLTGHAYQMC-QDAENGIWFKKIPLCKVIHCHPPPVIVNGKHTGMMaENFLYGNEVSYECDQ----GFY 753
Cdd:PHA02639   44 KLIEYTCNTDYALIGDRFRTCiKDKNNAIWSNKAPFCMLKECNDPPSIINGKIYNKR-EMYKVGDEIYYVCNEhkgvQYS 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   754 LLGEKKLQCRSDSkghgSWSGPSPQClrspPVTRCPNPEVKHGYkLN--KTHSAYSHNDIVYVDCNPGFIMNGSRVIRCH 831
Cdd:PHA02639  123 LVGNEKITCIQDK----SWKPDPPIC----KMINCRFPALQNGY-INgiPSNKKFYYKTRVGFSCKSGFDLVGEKYSTCN 193

                         170
                  ....*....|....
gi 42544177   832 TDNTWVPGVPTCIK 845
Cdd:PHA02639  194 INATWFPSIPTCVR 207
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 15-147 4.41e-17

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 82.39  E-value: 4.41e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177    15 APGVLGISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCitkdkVDGTWDKPaPKCEYFnkysSCPEP 94
Cdd:PHA02927  140 APICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-----SGGEWSDP-PTCQIV----KCPHP 209

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 42544177    95 IVPGGYKIRG-STPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPtRLPTCV 147
Cdd:PHA02927  210 TISNGYLSSGfKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWQP-ELPKCV 262
PHA02639 PHA02639
EEV host range protein; Provisional
 272-466 9.99e-17

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 82.02  E-value: 9.99e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   272 EEIFCPSPPPILNGrHIGNSLANVSYGSIVTYTCDPDpeegvnFILIGESTLRCTVDsQKTGTWSGPAPRCELStsavQC 351
Cdd:PHA02639   18 KSIYCDKPDDISNG-FITELMEKYEIGKLIEYTCNTD------YALIGDRFRTCIKD-KNNAIWSNKAPFCMLK----EC 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   352 PHPQILRGRMVSGQKDRYTYNDTVIFACM----FGFTLKGSKQIRCNAQGTWEPSAPVCEK-ECQAPP---NILNGQKED 423
Cdd:PHA02639   86 NDPPSIINGKIYNKREMYKVGDEIYYVCNehkgVQYSLVGNEKITCIQDKSWKPDPPICKMiNCRFPAlqnGYINGIPSN 165

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 42544177   424 RhmvRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQC 466
Cdd:PHA02639  166 K---KFYYKTRVGFSCKSGFDLVGEKYSTCNINATWFPSIPTC 205
PHA02639 PHA02639
EEV host range protein; Provisional
 491-657 4.99e-16

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 80.09  E-value: 4.99e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   491 VNSSCGEGYKLSGSVYQEC---QGTIPWFMEIRLCKEITCPPPPVIYNGAhTGSSLEDFPYGTTVTYTCNPgpERGVEFS 567
Cdd:PHA02639   46 IEYTCNTDYALIGDRFRTCikdKNNAIWSNKAPFCMLKECNDPPSIINGK-IYNKREMYKVGDEIYYVCNE--HKGVQYS 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   568 LIGESTIRCTSNDqergTWSGPAPLCKLsllaVQCSHVHIANGYkISG--KEAPYFYNDTVTFKCYSGFTLKGSSQIRCK 645
Cdd:PHA02639  123 LVGNEKITCIQDK----SWKPDPPICKM----INCRFPALQNGY-INGipSNKKFYYKTRVGFSCKSGFDLVGEKYSTCN 193

                         170
                  ....*....|..
gi 42544177   646 ADNTWDPEIPVC 657
Cdd:PHA02639  194 INATWFPSIPTC 205
PHA02831 PHA02831
EEV host range protein; Provisional
 527-668 8.86e-16

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 78.50  E-value: 8.86e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   527 CPPPPVIYNGaHTGSSLEDFPYGTTVTYTCNPGP-ERgveFSLIGESTIRCTSndqerGTWSGPAPLCKLsllaVQCSHV 605
Cdd:PHA02831   78 CKDPVTILNG-YIKNKKDQYSFGDSVTYACKVNKlEK---YSIVGNETVKCIN-----KQWVPKYPVCKL----IRCKYP 144

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 42544177   606 HIANGYkISGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEKETCQHVRQS 668
Cdd:PHA02831  145 ALQNGF-LNVFEKKFYYGDIVNFKCKKGFILLGSSVSTCDINSIWYPGIPKCVKDKVHNEIQP 206
PHA02639 PHA02639
EEV host range protein; Provisional
 523-714 1.80e-15

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 78.17  E-value: 1.80e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   523 KEITCPPPPVIYNGAHTgSSLEDFPYGTTVTYTCNpgpergVEFSLIGESTIRCTsNDQERGTWSGPAPLCKLSllavQC 602
Cdd:PHA02639   18 KSIYCDKPDDISNGFIT-ELMEKYEIGKLIEYTCN------TDYALIGDRFRTCI-KDKNNAIWSNKAPFCMLK----EC 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   603 SHV-HIANGyKISGKEAPYFYNDTVTFKC--YSG--FTLKGSSQIRCKADNTWDPEIPVCEKETCQHvrQSLQE-----L 672
Cdd:PHA02639   86 NDPpSIING-KIYNKREMYKVGDEIYYVCneHKGvqYSLVGNEKITCIQDKSWKPDPPICKMINCRF--PALQNgyingI 162

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 42544177   673 PAGSRV---ELVNTSCQDGYQLTGHAYQMCQDaeNGIWFKKIPLC 714
Cdd:PHA02639  163 PSNKKFyykTRVGFSCKSGFDLVGEKYSTCNI--NATWFPSIPTC 205
PHA02639 PHA02639
EEV host range protein; Provisional
 17-210 2.81e-15

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 77.78  E-value: 2.81e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177    17 GVLGISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCItKDKVDGTWDKPAPKCEYfnKYSSCPEPIV 96
Cdd:PHA02639   16 GVKSIYCDKPDDISNGFITELMEKYEIGKLIEYTCNTDYALIGDRFRTCI-KDKNNAIWSNKAPFCML--KECNDPPSII 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177    97 PGG-YKIRgsTPYRHGDSVTFACK----TNFSMNGNKSVWCQANNMWGPTRlPTCVSVfplECpALPMIHNGH-HTSENV 170
Cdd:PHA02639   93 NGKiYNKR--EMYKVGDEIYYVCNehkgVQYSLVGNEKITCIQDKSWKPDP-PICKMI---NC-RFPALQNGYiNGIPSN 165

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 42544177   171 GSIAPGLSVTYSCESGYLLVGEKIINCLSSGKWSAVPPTC 210
Cdd:PHA02639  166 KKFYYKTRVGFSCKSGFDLVGEKYSTCNINATWFPSIPTC 205
PHA02639 PHA02639
EEV host range protein; Provisional
 234-406 7.30e-15

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 76.63  E-value: 7.30e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   234 VGVTANFFCDEGYRLQGPPSSRCVIAGQGVAWT-KMPVCEEIFCPSPPPILNGRhIGNSLANVSYGSIVTYTCDPdpEEG 312
Cdd:PHA02639   42 IGKLIEYTCNTDYALIGDRFRTCIKDKNNAIWSnKAPFCMLKECNDPPSIINGK-IYNKREMYKVGDEIYYVCNE--HKG 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   313 VNFILIGESTLRCTVDSqktgTWSGPAPRCELstsaVQCPHPQILRGrMVSG--QKDRYTYNDTVIFACMFGFTLKGSKQ 390
Cdd:PHA02639  119 VQYSLVGNEKITCIQDK----SWKPDPPICKM----INCRFPALQNG-YINGipSNKKFYYKTRVGFSCKSGFDLVGEKY 189

                         170
                  ....*....|....*.
gi 42544177   391 IRCNAQGTWEPSAPVC 406
Cdd:PHA02639  190 STCNINATWFPSIPTC 205
PHA02639 PHA02639
EEV host range protein; Provisional
 348-522 7.44e-15

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 76.63  E-value: 7.44e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   348 AVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRC---NAQGTWEPSAPVCE-KECQAPPNILNGQKED 423
Cdd:PHA02639   19 SIYCDKPDDISNGFITELMEKYEIGKLIEYTCNTDYALIGDRFRTCikdKNNAIWSNKAPFCMlKECNDPPSIINGKIYN 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   424 RHMVrFDPGTSIKYSCNP----GYVLVGEESIQCTSEGVWTPPVPQCKVAACEATGRQ---LLTKPQHQ--FVRPDVNSS 494
Cdd:PHA02639   99 KREM-YKVGDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKPDPPICKMINCRFPALQngyINGIPSNKkfYYKTRVGFS 177

                         170       180
                  ....*....|....*....|....*...
gi 42544177   495 CGEGYKLSGSVYQECQGTIPWFMEIRLC 522
Cdd:PHA02639  178 CKSGFDLVGEKYSTCNINATWFPSIPTC 205
PHA02639 PHA02639
EEV host range protein; Provisional
 788-968 1.79e-14

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 75.47  E-value: 1.79e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   788 CPNPE-VKHGYkLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDNT---WVPGVPTCIKKAfigCPPPPKTPNGNHT 863
Cdd:PHA02639   22 CDKPDdISNGF-ITELMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKNnaiWSNKAPFCMLKE---CNDPPSIINGKIY 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   864 GGNiARFSPGMSILYSCDQ----GYLLVGEALLLCTHEGTWSQPAPHCKEVNCSSPADMDGIQKGLEPRKMYQYGAVVTL 939
Cdd:PHA02639   98 NKR-EMYKVGDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKPDPPICKMINCRFPALQNGYINGIPSNKKFYYKTRVGF 176

                         170       180
                  ....*....|....*....|....*....
gi 42544177   940 ECEDGYMLEGSPQSQCQSDHQWNPPLAVC 968
Cdd:PHA02639  177 SCKSGFDLVGEKYSTCNINATWFPSIPTC 205
PHA02817 PHA02817
EEV Host range protein; Provisional
 522-659 2.25e-14

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 73.44  E-value: 2.25e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   522 CKEITCPPPPVIYNGaHTGSSLEDFPYGTTVTYTCNPGpERGVEFSLIGESTIRCTSNdqerGTWSGPAPLCKLsllaVQ 601
Cdd:PHA02817   19 CDLNKCCYPPSIKNG-YIYNKKTEYNIGSNVTFFCGNN-TRGVRYTLVGEKNIICEKD----GKWNKEFPVCKI----IR 88

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   602 CSHVHIANGYkISG--KEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEK 659
Cdd:PHA02817   89 CRFPALQNGF-VNGipDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPICSR 147
PHA02927 PHA02927
secreted complement-binding protein; Provisional
 23-210 3.13e-14

secreted complement-binding protein; Provisional


Pssm-ID: 222943 [Multi-domain]  Cd Length: 263  Bit Score: 73.92  E-value: 3.13e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177    23 CGSPPPILNGRISYYSTPIavGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFnkysSCPE-PIVPGGYK 101
Cdd:PHA02927   86 CPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAPICESV----KCQSpPSISNGRH 159

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   102 IRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPtrlPTCVSVfplECPAlPMIHNGHHTSENVGSIAPGLSVTY 181
Cdd:PHA02927  160 NGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDP---PTCQIV---KCPH-PTISNGYLSSGFKRSYSYNDNVDF 232

                         170       180
                  ....*....|....*....|....*....
gi 42544177   182 SCESGYLLVGEKIINCLSSGKWSAVPPTC 210
Cdd:PHA02927  233 KCKYGYKLSGSSSSTCSPGNTWQPELPKC 261
PHA02817 PHA02817
EEV Host range protein; Provisional
 271-408 3.19e-14

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 73.05  E-value: 3.19e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   271 CEEIFCPSPPPILNGrHIGNSLANVSYGSIVTYTCDPDpEEGVNFILIGESTLRCtvdsQKTGTWSGPAPRCELstsaVQ 350
Cdd:PHA02817   19 CDLNKCCYPPSIKNG-YIYNKKTEYNIGSNVTFFCGNN-TRGVRYTLVGEKNIIC----EKDGKWNKEFPVCKI----IR 88

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   351 CPHPQILRGrMVSGQKD--RYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVCEK 408
Cdd:PHA02817   89 CRFPALQNG-FVNGIPDskKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPICSR 147
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 410-467 4.70e-14

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 67.49  E-value: 4.70e-14
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177  410 CQAPPNILNGQKEDRhMVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQCK 467
Cdd:cd00033    1 CPPPPVPENGTVTGS-KGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
PHA02831 PHA02831
EEV host range protein; Provisional
 257-409 2.00e-13

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 71.56  E-value: 2.00e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   257 VIAGQGvAWTKMPVC-EEIFCPSPPPILNGrHIGNSLANVSYGSIVTYTCDPDPEEgvNFILIGESTLRCTvdsqkTGTW 335
Cdd:PHA02831   59 VTCNNG-SWSTKNMCiGKRNCKDPVTILNG-YIKNKKDQYSFGDSVTYACKVNKLE--KYSIVGNETVKCI-----NKQW 129

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 42544177   336 SGPAPRCELstsaVQCPHPQILRGRMVSGQKDRYtYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVCEKE 409
Cdd:PHA02831  130 VPKYPVCKL----IRCKYPALQNGFLNVFEKKFY-YGDIVNFKCKKGFILLGSSVSTCDINSIWYPGIPKCVKD 198
PHA02817 PHA02817
EEV Host range protein; Provisional
 851-968 2.06e-13

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 70.74  E-value: 2.06e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   851 CPPPPKTPNGnHTGGNIARFSPGMSILYSCDQG-----YLLVGEALLLCTHEGTWSQPAPHCKEVNCSSPADMDGIQKGL 925
Cdd:PHA02817   24 CCYPPSIKNG-YIYNKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCRFPALQNGFVNGI 102

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 42544177   926 EPRKMYQYGAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAVC 968
Cdd:PHA02817  103 PDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPIC 145
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 527-594 3.19e-13

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 65.18  E-value: 3.19e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177  527 CPPPPVIYNGAHTGSSlEDFPYGTTVTYTCNPGpergveFSLIGESTIRCTSNdqerGTWSGPAPLCK 594
Cdd:cd00033    1 CPPPPVPENGTVTGSK-GSYSYGSTVTYSCNEG------YTLVGSSTITCTEN----GGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 410-466 9.13e-13

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 63.70  E-value: 9.13e-13
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177     410 CQAPPNILNGQKEDRHmVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQC 466
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02831 PHA02831
EEV host range protein; Provisional
 679-845 2.06e-12

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 68.48  E-value: 2.06e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   679 ELVNTSCQDGYQltgHAYQMCQdaeNGIWFKKIPLCKVIHCHPPPVIVNGkHTGMMAENFLYGNEVSYECD----QGFYL 754
Cdd:PHA02831   44 ENLEYKCNNNFD---KVFVTCN---NGSWSTKNMCIGKRNCKDPVTILNG-YIKNKKDQYSFGDSVTYACKvnklEKYSI 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   755 LGEKKLQCRSdskghGSWSGPSPQClrspPVTRCPNPEVKHGYkLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDN 834
Cdd:PHA02831  117 VGNETVKCIN-----KQWVPKYPVC----KLIRCKYPALQNGF-LNVFEKKFYYGDIVNFKCKKGFILLGSSVSTCDINS 186

                         170
                  ....*....|.
gi 42544177   835 TWVPGVPTCIK 845
Cdd:PHA02831  187 IWYPGIPKCVK 197
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 527-593 3.04e-12

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 62.16  E-value: 3.04e-12
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177     527 CPPPPVIYNGAHTGSSlEDFPYGTTVTYTCNPGpergveFSLIGESTIRCTSNdqerGTWSGPAPLC 593
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPG------YTLIGSSTITCLEN----GTWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 154-211 3.42e-12

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 62.10  E-value: 3.42e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177  154 CPALPMIHNGHHTSENvGSIAPGLSVTYSCESGYLLVGEKIINCLSSGKWSAVPPTCE 211
Cdd:cd00033    1 CPPPPVPENGTVTGSK-GSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 719-779 4.72e-12

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 61.71  E-value: 4.72e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42544177  719 CHPPPVIVNGKHTGMMaENFLYGNEVSYECDQGFYLLGEKKLQCRSDskghGSWSGPSPQC 779
Cdd:cd00033    1 CPPPPVPENGTVTGSK-GSYSYGSTVTYSCNEGYTLVGSSTITCTEN----GGWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 351-407 2.37e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 59.78  E-value: 2.37e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177  351 CPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVCE 407
Cdd:cd00033    1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
PHA02831 PHA02831
EEV host range protein; Provisional
 806-968 3.13e-11

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 65.01  E-value: 3.13e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   806 YSHNDIVYVDCNPGFimngSRVIRCHTDNTWVPGvPTCIKKAfiGCPPPPKTPNGNhTGGNIARFSPGMSILYSCD---- 881
Cdd:PHA02831   40 YEENENLEYKCNNNF----DKVFVTCNNGSWSTK-NMCIGKR--NCKDPVTILNGY-IKNKKDQYSFGDSVTYACKvnkl 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   882 QGYLLVGEALLLCThEGTWSQPAPHCKEVNCSSPADMDGIQKGLEprKMYQYGAVVTLECEDGYMLEGSPQSQCQSDHQW 961
Cdd:PHA02831  112 EKYSIVGNETVKCI-NKQWVPKYPVCKLIRCKYPALQNGFLNVFE--KKFYYGDIVNFKCKKGFILLGSSVSTCDINSIW 188


                  ....*..
gi 42544177   962 NPPLAVC 968
Cdd:PHA02831  189 YPGIPKC 195
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 276-343 3.37e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 59.40  E-value: 3.37e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177  276 CPSPPPILNGRHIGnSLANVSYGSIVTYTCDPdpeegvNFILIGESTLRCTVDsqktGTWSGPAPRCE 343
Cdd:cd00033    1 CPPPPVPENGTVTG-SKGSYSYGSTVTYSCNE------GYTLVGSSTITCTEN----GGWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 851-908 4.74e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 59.01  E-value: 4.74e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177  851 CPPPPKTPNGNHTGGNiARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHCK 908
Cdd:cd00033    1 CPPPPVPENGTVTGSK-GSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 602-658 5.03e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 59.01  E-value: 5.03e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177  602 CSHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCE 658
Cdd:cd00033    1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
PHA02831 PHA02831
EEV host range protein; Provisional
 369-522 6.04e-11

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 64.24  E-value: 6.04e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   369 YTYNDTVIFACMFGFTlkgSKQIRCNaQGTWEpSAPVC--EKECQAPPNILNG---QKEDRHMVrfdpGTSIKYSCNPG- 442
Cdd:PHA02831   40 YEENENLEYKCNNNFD---KVFVTCN-NGSWS-TKNMCigKRNCKDPVTILNGyikNKKDQYSF----GDSVTYACKVNk 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   443 ---YVLVGEESIQCTsEGVWTPPVPQCKVAACEATGRQ--LLTKPQHQFVRPD-VNSSCGEGYKLSGSVYQECQGTIPWF 516
Cdd:PHA02831  111 lekYSIVGNETVKCI-NKQWVPKYPVCKLIRCKYPALQngFLNVFEKKFYYGDiVNFKCKKGFILLGSSVSTCDINSIWY 189


                  ....*.
gi 42544177   517 MEIRLC 522
Cdd:PHA02831  190 PGIPKC 195
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 23-83 6.36e-11

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 58.63  E-value: 6.36e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42544177   23 CGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCItkdkVDGTWDKPAPKCE 83
Cdd:cd00033    1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCT----ENGGWSPPPPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 719-779 8.10e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 58.31  E-value: 8.10e-11
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42544177     719 CHPPPVIVNGKHTGMmAENFLYGNEVSYECDQGFYLLGEKKLQCRSDskghGSWSGPSPQC 779
Cdd:smart00032    1 CPPPPDIENGTVTSS-SGTYSYGDTVTYSCDPGYTLIGSSTITCLEN----GTWSPPPPTC 56
PHA02639 PHA02639
EEV host range protein; Provisional
 15-153 8.37e-11

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 64.30  E-value: 8.37e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177    15 APGVLGISCGSPPPILNGRISYYSTPIAVGTVIRYSCSG----TFRLIGEKSLLCiTKDKvdgTWDKPAPKCEYFNkyss 90
Cdd:PHA02639   77 APFCMLKECNDPPSIINGKIYNKREMYKVGDEIYYVCNEhkgvQYSLVGNEKITC-IQDK---SWKPDPPICKMIN---- 148

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 42544177    91 CPEPIVPGGY--KIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTrLPTCVSVFPLE 153
Cdd:PHA02639  149 CRFPALQNGYinGIPSNKKFYYKTRVGFSCKSGFDLVGEKYSTCNINATWFPS-IPTCVRNKPID 212
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 154-210 9.47e-11

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 57.92  E-value: 9.47e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177     154 CPALPMIHNGHHTSENvGSIAPGLSVTYSCESGYLLVGEKIINCLSSGKWSAVPPTC 210
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
851-907 1.23e-10

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 57.89  E-value: 1.23e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177    851 CPPPPKTPNGNHTGGNiARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHC 907
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 23-82 1.92e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 57.15  E-value: 1.92e-10
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177      23 CGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITkdkvDGTWDKPAPKC 82
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLE----NGTWSPPPPTC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 351-406 3.19e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 56.38  E-value: 3.19e-10
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 42544177     351 CPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVC 406
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02817 PHA02817
EEV Host range protein; Provisional
 409-535 3.26e-10

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 61.50  E-value: 3.26e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   409 ECQAPPNILNGQKEDRHMVrFDPGTSIKYSCNPG-----YVLVGEESIQCTSEGVWTPPVPQCKVAACEATGRQL----- 478
Cdd:PHA02817   23 KCCYPPSIKNGYIYNKKTE-YNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCRFPALQNgfvng 101

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177   479 LTKPQHQFVRPDVNSSCGEGYKLSGSVYQECQGTIPWFMEIRLCKEITCPPPPVIYN 535
Cdd:PHA02817  102 IPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPICSRDNITYNKIYIN 158
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 851-907 3.45e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 56.38  E-value: 3.45e-10
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177     851 CPPPPKTPNGNHTGGNiARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHC 907
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02817 PHA02817
EEV Host range protein; Provisional
 714-845 4.08e-10

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 61.11  E-value: 4.08e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   714 CKVIHCHPPPVIVNGkHTGMMAENFLYGNEVSYECDQG-----FYLLGEKKLQCRSDskghGSWSGPSPQClrspPVTRC 788
Cdd:PHA02817   19 CDLNKCCYPPSIKNG-YIYNKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKD----GKWNKEFPVC----KIIRC 89

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 42544177   789 PNPEVKHGYkLNKTHSA--YSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWVPGVPTCIK 845
Cdd:PHA02817   90 RFPALQNGF-VNGIPDSkkFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPICSR 147
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 607-657 5.62e-10

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 56.00  E-value: 5.62e-10
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|.
gi 42544177     607 IANGYkISGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVC 657
Cdd:smart00032    7 IENGT-VTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02817 PHA02817
EEV Host range protein; Provisional
 607-714 1.16e-09

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 59.57  E-value: 1.16e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   607 IANGYkISGKEAPYFYNDTVTFKCYSG-----FTLKGSSQIRCKADNTWDPEIPVCEKETCQHvrQSLQE-----LPAGS 676
Cdd:PHA02817   30 IKNGY-IYNKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRCRF--PALQNgfvngIPDSK 106

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 42544177   677 RV---ELVNTSCQDGYQLTGHAYQMCqdAENGIWFKKIPLC 714
Cdd:PHA02817  107 KFyyeSEVSFSCKPGFVLIGTKYSVC--GINSSWIPKVPIC 145
PHA02817 PHA02817
EEV Host range protein; Provisional
 23-147 1.69e-09

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 59.18  E-value: 1.69e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177    23 CGSPPPILNGRISYYSTPIAVGTVIRYSCSGT-----FRLIGEKSLLCitkdKVDGTWDKPAPKCEYFnkysSCPEPIVP 97
Cdd:PHA02817   24 CCYPPSIKNGYIYNKKTEYNIGSNVTFFCGNNtrgvrYTLVGEKNIIC----EKDGKWNKEFPVCKII----RCRFPALQ 95

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 42544177    98 GGY--KIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPtRLPTCV 147
Cdd:PHA02817   96 NGFvnGIPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIP-KVPICS 146
PHA02831 PHA02831
EEV host range protein; Provisional
 333-466 1.84e-09

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 59.62  E-value: 1.84e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   333 GTWSGPaprcELSTSAVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFG----FTLKGSKQIRCnAQGTWEPSAPVCEK 408
Cdd:PHA02831   64 GSWSTK----NMCIGKRNCKDPVTILNGYIKNKKDQYSFGDSVTYACKVNklekYSIVGNETVKC-INKQWVPKYPVCKL 138

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 42544177   409 -ECQAPP---NILNGQKEdrhmvRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQC 466
Cdd:PHA02831  139 iRCKYPAlqnGFLNVFEK-----KFYYGDIVNFKCKKGFILLGSSVSTCDINSIWYPGIPKC 195
PHA02831 PHA02831
EEV host range protein; Provisional
 22-147 2.35e-09

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 59.62  E-value: 2.35e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177    22 SCGSPPPILNGRISYYSTPIAVGTVIRYSCS----GTFRLIGEKSLLCItkdkvDGTWDKPAPKCeyfnKYSSCPEPIVP 97
Cdd:PHA02831   77 NCKDPVTILNGYIKNKKDQYSFGDSVTYACKvnklEKYSIVGNETVKCI-----NKQWVPKYPVC----KLIRCKYPALQ 147

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 42544177    98 GGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTrLPTCV 147
Cdd:PHA02831  148 NGFLNVFEKKFYYGDIVNFKCKKGFILLGSSVSTCDINSIWYPG-IPKCV 196
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 276-342 2.85e-09

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 53.68  E-value: 2.85e-09
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177     276 CPSPPPILNGRHIGNSlANVSYGSIVTYTCDPdpeegvNFILIGESTLRCtvdsQKTGTWSGPAPRC 342
Cdd:smart00032    1 CPPPPDIENGTVTSSS-GTYSYGDTVTYSCDP------GYTLIGSSTITC----LENGTWSPPPPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 788-844 5.29e-09

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 53.24  E-value: 5.29e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177  788 CPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWVPGVPTCI 844
Cdd:cd00033    1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 91-147 6.83e-09

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 52.85  E-value: 6.83e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 42544177   91 CPEPIVP-GGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTrLPTCV 147
Cdd:cd00033    1 CPPPPVPeNGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPP-PPTCE 57
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 788-843 7.37e-09

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 52.53  E-value: 7.37e-09
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*.
gi 42544177     788 CPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWVPGVPTC 843
Cdd:smart00032    1 CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
410-466 1.01e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.50  E-value: 1.01e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177    410 CQAPPNILNGQKEDRHmVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQC 466
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
527-593 1.03e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 52.12  E-value: 1.03e-08
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177    527 CPPPPVIYNGAHTGSSlEDFPYGTTVTYTCNPGpergveFSLIGESTIRCTSNdqerGTWSGPAPLC 593
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPG------YRLVGSPTITCQED----GTWSPPFPEC 56
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 869-968 2.28e-08

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 57.02  E-value: 2.28e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   869 RFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAphckevnCSSPADMDGIQKGLEPRKMYQYGAVVTLECEDGYMLE 948
Cdd:PHA02954  146 KYSFGEHITINCDVGYEVIGASYISCTANSWNVIPS-------CQQKCDIPSLSNGLISGSTFSIGGVIHLSCKSGFTLT 218

                          90       100
                  ....*....|....*....|
gi 42544177   949 GSPQSQCqSDHQWNPPLAVC 968
Cdd:PHA02954  219 GSPSSTC-IDGKWNPVLPIC 237
Sushi pfam00084
Sushi repeat (SCR repeat);
351-406 2.34e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 51.35  E-value: 2.34e-08
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 42544177    351 CPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVC 406
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
719-779 2.51e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 51.35  E-value: 2.51e-08
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 42544177    719 CHPPPVIVNGKHTGMMaENFLYGNEVSYECDQGFYLLGEKKLQCRsdskGHGSWSGPSPQC 779
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPGYRLVGSPTITCQ----EDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
612-657 2.55e-08

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 51.35  E-value: 2.55e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 42544177    612 KISGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVC 657
Cdd:pfam00084   11 KVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 91-146 5.08e-08

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 50.22  E-value: 5.08e-08
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177      91 CPEPI-VPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTrLPTC 146
Cdd:smart00032    1 CPPPPdIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPP-PPTC 56
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 931-969 6.49e-08

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 50.15  E-value: 6.49e-08
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 42544177  931 YQYGAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAVCR 969
Cdd:cd00033   19 YSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 592-845 6.74e-08

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 55.48  E-value: 6.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   592 LCKLSLLAVQCSHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLKGSSQIrCKADNtWDPEIPVCEKETCQHVRQSLQE 671
Cdd:PHA02954   10 LCVLPAVVYSTCTVPTMNNAKLTSTETSFNDKQKVTFTCDSGYYSLDPNAV-CETDK-WKYENPCKKMCTVSDYVSELYD 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   672 LPAGSRVELVNTSCQDGYQltghaYQMCQDAENGIWFKKIPLCKVIHCHppPVIVNGKHTGMMAENFLYGNEVSYECDQG 751
Cdd:PHA02954   88 KPLYEVNSTITLICKDETK-----YFRCEEKNGNTSWNDTVTCPNAECQ--PLQLEHGSCQPVKEKYSFGEHITINCDVG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   752 FYLLGEKKLQCRSDskghgSWSgPSPQCLRsppvtRCPNPEVKHGYklnKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCh 831
Cdd:PHA02954  161 YEVIGASYISCTAN-----SWN-VIPSCQQ-----KCDIPSLSNGL---ISGSTFSIGGVIHLSCKSGFTLTGSPSSTC- 225

                         250
                  ....*....|....
gi 42544177   832 TDNTWVPGVPTCIK 845
Cdd:PHA02954  226 IDGKWNPVLPICVR 239
PHA02817 PHA02817
EEV Host range protein; Provisional
 153-271 1.45e-07

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 53.41  E-value: 1.45e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   153 ECPALPMIHNGH-HTSENVGSIapGLSVTYSCESG-----YLLVGEKIINCLSSGKWSAVPPTCEEARCkslgRFP---N 223
Cdd:PHA02817   23 KCCYPPSIKNGYiYNKKTEYNI--GSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVCKIIRC----RFPalqN 96

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 42544177   224 GKVKEPPILR---VGVTANFFCDEGYRLQGPPSSRCVIAGqgvAW-TKMPVC 271
Cdd:PHA02817   97 GFVNGIPDSKkfyYESEVSFSCKPGFVLIGTKYSVCGINS---SWiPKVPIC 145
Sushi pfam00084
Sushi repeat (SCR repeat);
276-342 3.60e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 47.88  E-value: 3.60e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177    276 CPSPPPILNGrHIGNSLANVSYGSIVTYTCDPdpeegvNFILIGESTLRCtvdsQKTGTWSGPAPRC 342
Cdd:pfam00084    1 CPPPPDIPNG-KVSATKNEYNYGASVSYECDP------GYRLVGSPTITC----QEDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
23-82 6.42e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 47.11  E-value: 6.42e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177     23 CGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITkdkvDGTWDKPAPKC 82
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQE----DGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
788-843 8.37e-07

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 46.72  E-value: 8.37e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 42544177    788 CPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWVPGVPTC 843
Cdd:pfam00084    1 CPPPPDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 931-968 8.89e-07

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 46.75  E-value: 8.89e-07
                            10        20        30
                    ....*....|....*....|....*....|....*...
gi 42544177     931 YQYGAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAVC 968
Cdd:smart00032   19 YSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56
PHA02817 PHA02817
EEV Host range protein; Provisional
 689-781 1.02e-06

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 50.71  E-value: 1.02e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   689 YQLTGHAYQMCQdaENGIWFKKIPLCKVIHCHpPPVIVNGKHTGM-MAENFLYGNEVSYECDQGFYLLGEKKLQCRSDSk 767
Cdd:PHA02817   61 YTLVGEKNIICE--KDGKWNKEFPVCKIIRCR-FPALQNGFVNGIpDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINS- 136

                          90
                  ....*....|....
gi 42544177   768 ghgSWSGPSPQCLR 781
Cdd:PHA02817  137 ---SWIPKVPICSR 147
Sushi pfam00084
Sushi repeat (SCR repeat);
154-210 1.91e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 45.95  E-value: 1.91e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177    154 CPALPMIHNGHHTSENvGSIAPGLSVTYSCESGYLLVGEKIINCLSSGKWSAVPPTC 210
Cdd:pfam00084    1 CPPPPDIPNGKVSATK-NEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
Sushi pfam00084
Sushi repeat (SCR repeat);
931-968 1.93e-06

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 45.95  E-value: 1.93e-06
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 42544177    931 YQYGAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAVC 968
Cdd:pfam00084   19 YNYGASVSYECDPGYRLVGSPTITCQEDGTWSPPFPEC 56
PHA02639 PHA02639
EEV host range protein; Provisional
 851-969 3.60e-06

EEV host range protein; Provisional


Pssm-ID: 165022 [Multi-domain]  Cd Length: 295  Bit Score: 50.05  E-value: 3.60e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   851 CPPPPKTPNGNHTGgNIARFSPGMSILYSCDQGYLLVGEALLLCTHE---GTWSQPAPHCKEVNCSSPADMDGiQKGLEP 927
Cdd:PHA02639   22 CDKPDDISNGFITE-LMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDknnAIWSNKAPFCMLKECNDPPSIIN-GKIYNK 99

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 42544177   928 RKMYQYGAVVTLECED----GYMLEGSPQSQCQSDHQWNPPLAVCR 969
Cdd:PHA02639  100 REMYKVGDEIYYVCNEhkgvQYSLVGNEKITCIQDKSWKPDPPICK 145
Sushi pfam00084
Sushi repeat (SCR repeat);
91-146 2.09e-05

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 42.87  E-value: 2.09e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 42544177     91 CPEP-IVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTrLPTC 146
Cdd:pfam00084    1 CPPPpDIPNGKVSATKNEYNYGASVSYECDPGYRLVGSPTITCQEDGTWSPP-FPEC 56
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 349-466 3.55e-05

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 47.00  E-value: 3.55e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   349 VQCPHPQILRGRMVSGQ----KDRYTYNDTVIFACMFGFTLKGSKQIRCNAQgTWEpSAPVCEKECQApPNILNGQKEDR 424
Cdd:PHA02954  123 VTCPNAECQPLQLEHGScqpvKEKYSFGEHITINCDVGYEVIGASYISCTAN-SWN-VIPSCQQKCDI-PSLSNGLISGS 199

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 42544177   425 hmvRFDPGTSIKYSCNPGYVLVGEESIQCTsEGVWTPPVPQC 466
Cdd:PHA02954  200 ---TFSIGGVIHLSCKSGFTLTGSPSSTCI-DGKWNPVLPIC 237
CCP cd00033
Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) ...
 215-272 4.43e-05

Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.


Pssm-ID: 153056 [Multi-domain]  Cd Length: 57  Bit Score: 42.06  E-value: 4.43e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177  215 CKSLGRFPNGKVK-EPPILRVGVTANFFCDEGYRLQGPPSSRCVIAGQgvaWT-KMPVCE 272
Cdd:cd00033    1 CPPPPVPENGTVTgSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGG---WSpPPPTCE 57
PHA02831 PHA02831
EEV host range protein; Provisional
 108-271 4.70e-05

EEV host range protein; Provisional


Pssm-ID: 165176 [Multi-domain]  Cd Length: 268  Bit Score: 46.52  E-value: 4.70e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   108 YRHGDSVTFACKTNFSmngnkSVWCQANN-MWGPTRLptCVSvfPLECPALPMIHNGHHTSENvGSIAPGLSVTYSCESG 186
Cdd:PHA02831   40 YEENENLEYKCNNNFD-----KVFVTCNNgSWSTKNM--CIG--KRNCKDPVTILNGYIKNKK-DQYSFGDSVTYACKVN 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   187 ----YLLVGEKIINCLSsGKWSAVPPTCEEARCKslgrFP---NGkvkeppILRV-------GVTANFFCDEGYRLQGPP 252
Cdd:PHA02831  110 klekYSIVGNETVKCIN-KQWVPKYPVCKLIRCK----YPalqNG------FLNVfekkfyyGDIVNFKCKKGFILLGSS 178

                         170
                  ....*....|....*....
gi 42544177   253 SSRCVIagQGVAWTKMPVC 271
Cdd:PHA02831  179 VSTCDI--NSIWYPGIPKC 195
PHA02954 PHA02954
EEV membrane glycoprotein; Provisional
 410-657 8.97e-05

EEV membrane glycoprotein; Provisional


Pssm-ID: 165263 [Multi-domain]  Cd Length: 317  Bit Score: 45.85  E-value: 8.97e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   410 CQAPpnILNGQKEDRHMVRFDPGTSIKYSCNPGYVLVGEESIQCTSEgvWTPPVPQCKVAACEATGRQLLTKPQHQfVRP 489
Cdd:PHA02954   21 CTVP--TMNNAKLTSTETSFNDKQKVTFTCDSGYYSLDPNAVCETDK--WKYENPCKKMCTVSDYVSELYDKPLYE-VNS 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   490 DVNSSCGEGYKLSGSvyQECQGTIPWfmeirlCKEITCPPP---PVIYNGAHTGSSLEDFPYGTTVTYTCNPGpergveF 566
Cdd:PHA02954   96 TITLICKDETKYFRC--EEKNGNTSW------NDTVTCPNAecqPLQLEHGSCQPVKEKYSFGEHITINCDVG------Y 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   567 SLIGESTIRCTSNdqergTWSgPAPLCKLsllavQCSHVHIANGYkISGkeAPYFYNDTVTFKCYSGFTLKGSSQIRCkA 646
Cdd:PHA02954  162 EVIGASYISCTAN-----SWN-VIPSCQQ-----KCDIPSLSNGL-ISG--STFSIGGVIHLSCKSGFTLTGSPSSTC-I 226

                         250
                  ....*....|.
gi 42544177   647 DNTWDPEIPVC 657
Cdd:PHA02954  227 DGKWNPVLPIC 237
CCP smart00032
Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat ...
 215-271 1.30e-04

Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR); The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.


Pssm-ID: 214478 [Multi-domain]  Cd Length: 56  Bit Score: 40.59  E-value: 1.30e-04
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*....
gi 42544177     215 CKSLGRFPNGKVK-EPPILRVGVTANFFCDEGYRLQGPPSSRCVIAGQgvaWT-KMPVC 271
Cdd:smart00032    1 CPPPPDIENGTVTsSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGT---WSpPPPTC 56
PHA02817 PHA02817
EEV Host range protein; Provisional
 788-913 1.71e-04

EEV Host range protein; Provisional


Pssm-ID: 165167 [Multi-domain]  Cd Length: 225  Bit Score: 44.16  E-value: 1.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42544177   788 CPNPEVKHGYKLNKThSAYSHNDIVYVDCNPG-----FIMNGSRVIRCHTDNTWVPGVPTCikkAFIGCPPPpKTPNGNH 862
Cdd:PHA02817   25 CYPPSIKNGYIYNKK-TEYNIGSNVTFFCGNNtrgvrYTLVGEKNIICEKDGKWNKEFPVC---KIIRCRFP-ALQNGFV 99

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 42544177   863 TG-GNIARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHCKEVNCS 913
Cdd:PHA02817  100 NGiPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPICSRDNIT 151
Sushi pfam00084
Sushi repeat (SCR repeat);
215-271 3.63e-04

Sushi repeat (SCR repeat);


Pssm-ID: 459664 [Multi-domain]  Cd Length: 56  Bit Score: 39.40  E-value: 3.63e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 42544177    215 CKSLGRFPNGKVK-EPPILRVGVTANFFCDEGYRLQGPPSSRCVIAGQgvaWT-KMPVC 271
Cdd:pfam00084    1 CPPPPDIPNGKVSaTKNEYNYGASVSYECDPGYRLVGSPTITCQEDGT---WSpPFPEC 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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