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Conserved domains on  [gi|2064674964|ref|NP_001382383|]
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proline and serine-rich protein 3 isoform 7 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 134-505 8.95e-09

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.80  E-value: 8.95e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  134 PDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPltpalRTLTSPAP 213
Cdd:PHA03247  2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG-----RAAQASSP 2679

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  214 VETLSSLGTQPNHVPLwSSVAQPGPPEAFYVERPPfpsvssPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHL 293
Cdd:PHA03247  2680 PQRPRRRAARPTVGSL-TSLADPPPPPPTPEPAPH------ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG 2752

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  294 GStlAPPASLASTLEPPASTPaPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSscaqPKSLGPKSRRSR 373
Cdd:PHA03247  2753 GP--ARPARPPTTAGPPAPAP-PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA----PAAALPPAASPA 2825

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  374 APRPEAAEQVPAAGQGPGPQlrgvlgqvvaarlFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKA 453
Cdd:PHA03247  2826 GPLPPPTSAQPTAPPPPPGP-------------PPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2064674964  454 ESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 505
Cdd:PHA03247  2893 RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLA 2944
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 134-505 8.95e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.80  E-value: 8.95e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  134 PDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPltpalRTLTSPAP 213
Cdd:PHA03247  2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG-----RAAQASSP 2679

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  214 VETLSSLGTQPNHVPLwSSVAQPGPPEAFYVERPPfpsvssPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHL 293
Cdd:PHA03247  2680 PQRPRRRAARPTVGSL-TSLADPPPPPPTPEPAPH------ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG 2752

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  294 GStlAPPASLASTLEPPASTPaPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSscaqPKSLGPKSRRSR 373
Cdd:PHA03247  2753 GP--ARPARPPTTAGPPAPAP-PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA----PAAALPPAASPA 2825

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  374 APRPEAAEQVPAAGQGPGPQlrgvlgqvvaarlFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKA 453
Cdd:PHA03247  2826 GPLPPPTSAQPTAPPPPPGP-------------PPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2064674964  454 ESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 505
Cdd:PHA03247  2893 RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLA 2944
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 156-304 9.58e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 39.25  E-value: 9.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 156 PTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRtltspAPVETLsslgTQPNHVPLWSSVAQ 235
Cdd:pfam09770 210 PAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQQPQQPQQHPGQG-----HPVTIL----QRPQSPQPDPAQPS 280

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2064674964 236 PGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQA----STLAHLGSTLAPPASLA 304
Cdd:pfam09770 281 IQPQAQQFHQQPPPVPVQPTQILQNPNRLSAARVGYPQNPQPGVQPAPAHQAhrqqGSFGRQAPIITHPQQLA 353
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 134-505 8.95e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.80  E-value: 8.95e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  134 PDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPltpalRTLTSPAP 213
Cdd:PHA03247  2605 RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG-----RAAQASSP 2679

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  214 VETLSSLGTQPNHVPLwSSVAQPGPPEAFYVERPPfpsvssPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHL 293
Cdd:PHA03247  2680 PQRPRRRAARPTVGSL-TSLADPPPPPPTPEPAPH------ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG 2752

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  294 GStlAPPASLASTLEPPASTPaPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSscaqPKSLGPKSRRSR 373
Cdd:PHA03247  2753 GP--ARPARPPTTAGPPAPAP-PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA----PAAALPPAASPA 2825

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  374 APRPEAAEQVPAAGQGPGPQlrgvlgqvvaarlFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKA 453
Cdd:PHA03247  2826 GPLPPPTSAQPTAPPPPPGP-------------PPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2064674964  454 ESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 505
Cdd:PHA03247  2893 RSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLA 2944
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 282-401 3.27e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 50.10  E-value: 3.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 282 PPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLA-CTPAPPASTLASPAVPQGLPI------- 353
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAApPAAAPPAPVAAPAAAAPAAAPaaapaav 445

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2064674964 354 ---PDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQV 401
Cdd:PRK14951  446 alaPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
PHA03247 PHA03247
large tegument protein UL36; Provisional
 156-505 9.54e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.17  E-value: 9.54e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  156 PTPAPAPASSQAPLRPeddilyqwRQRRKLEQAQGSKGDRAWVPPLTPALRTLTSPAPVETLSSLGTQPNHVPLWSSVAQ 235
Cdd:PHA03247  2569 PPPRPAPRPSEPAVTS--------RARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDP 2640

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  236 PGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPA 311
Cdd:PHA03247  2641 HPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSAT 2719

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  312 STP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGP 390
Cdd:PHA03247  2720 PLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP 2799

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  391 GPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC-----------RAKAESLKAK 459
Cdd:PHA03247  2800 SPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrrRPPSRSPAAK 2874

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*.
gi 2064674964  460 ALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 505
Cdd:PHA03247  2875 PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 308-402 7.35e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 46.04  E-value: 7.35e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  308 EPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSlgpksrrSRAPRPEAAEQVPAAG 387
Cdd:PRK12270    40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAP-------AAPPAAAAAAAPAAAA 112

                           90
                   ....*....|....*.
gi 2064674964  388 QGPGPQ-LRGVLGQVV 402
Cdd:PRK12270   113 VEDEVTpLRGAAAAVA 128
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
279-491 8.41e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 45.64  E-value: 8.41e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 279 GAVPPTQQASTLAhlgsTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSS 358
Cdd:PRK12323  371 GAGPATAAAAPVA----QPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 359 CAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQAtqpQT 438
Cdd:PRK12323  447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGW---VA 523

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2064674964 439 KVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPA 491
Cdd:PRK12323  524 ESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDM 576
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 269-404 1.44e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 44.71  E-value: 1.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 269 APQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTlAPPASTPAPLACTPAPPAstlasPAVP 348
Cdd:PRK14951  384 PEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPA-AAPAAAPAAVALAPAPPA-----QAAP 457

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2064674964 349 QGLPIPDPsscAQPKSLGPKSRRSRAPRPEAAEQVPAAgqgPGPQLRGVLGQVVAA 404
Cdd:PRK14951  458 ETVAIPVR---VAPEPAVASAAPAPAAAPAAARLTPTE---EGDVWHATVQQLAAA 507
PHA03247 PHA03247
large tegument protein UL36; Provisional
 122-502 2.09e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.54  E-value: 2.09e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  122 SDGLSPFSETFIPDSSKGLGPRAPASPAPAQaqtptPAPAPASSQAPLRPEDDILYQWrQRRKLEQAQGSKGDRAwvPPL 201
Cdd:PHA03247  2484 AEARFPFAAGAAPDPGGGGPPDPDAPPAPSR-----LAPAILPDEPVGEPVHPRMLTW-IRGLEELASDDAGDPP--PPL 2555

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  202 TPALRTLTSPAPVETlSSLGTQPNHVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIFWAPSShgffwAPQSGPWVSLGAV 281
Cdd:PHA03247  2556 PPAAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP-----LPPDTHAPDPPPP 2629

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  282 PPTQQASTLAHLGSTLAPPASLASTLEPP--------ASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPI 353
Cdd:PHA03247  2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPgrvsrprrARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPE 2709

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  354 PDPS--SCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPgpqlrgvlgqvvaarLFPDSLEDTPPHFEGPPPPKAGSPKV 431
Cdd:PHA03247  2710 PAPHalVSATPLPPGPAAARQASPALPAAPAPPAVPAGP---------------ATPGGPARPARPPTTAGPPAPAPPAA 2774

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2064674964  432 QATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPP 502
Cdd:PHA03247  2775 PAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP 2845
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
278-383 2.26e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 44.38  E-value: 2.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 278 LGAVPPTQQASTLAHLGStlapPASLASTLEPPASTPAPLASTLAPPASTPAPLAcTPAPPASTLASPAVPQGLPIPDPS 357
Cdd:PRK14971  384 TQPAAAPQPSAAAAASPS----PSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAA-VPVNPPSTAPQAVRPAQFKEEKKI 458

                          90       100
                  ....*....|....*....|....*.
gi 2064674964 358 SCAQPKSLGPKSRRsraPRPEAAEQV 383
Cdd:PRK14971  459 PVSKVSSLGPSTLR---PIQEKAEQA 481
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
233-405 8.24e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.56  E-value: 8.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 233 VAQPGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPwvslGAVPPTQQASTLAHLGSTLAPPASLASTLEPPAs 312
Cdd:PRK12323  382 VAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAP----ARRSPAPEALAAARQASARGPGGAPAPAPAPAA- 456

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 313 TPAPLASTLAPPASTPAPLACTPAPPASTLASPA-----------VPQGLPIPDP----SSCAQPKSLGPKSRRSRAPRP 377
Cdd:PRK12323  457 APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPApadddpppweeLPPEFASPAPaqpdAAPAGWVAESIPDPATADPDD 536

                         170       180
                  ....*....|....*....|....*...
gi 2064674964 378 EAAEQVPAAGQGPGPQLRGVLGQVVAAR 405
Cdd:PRK12323  537 AFETLAPAPAAAPAPRAAAATEPVVAPR 564
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 279-468 1.62e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.51  E-value: 1.62e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 279 GAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAV-----PQGLPI 353
Cdd:PRK07764  594 AAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAsdggdGWPAKA 673

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 354 PDPSSCAQPKSLGPKSRRSRAPRPEAAEQ-----VPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGS 428
Cdd:PRK07764  674 GGAAPAAPPPAPAPAAPAAPAGAAPAQPApapaaTPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAG 753

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2064674964 429 PKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSV 468
Cdd:PRK07764  754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSM 793
PRK11855 PRK11855
dihydrolipoamide acetyltransferase; Reviewed
 294-394 3.68e-03

dihydrolipoamide acetyltransferase; Reviewed


Pssm-ID: 237000 [Multi-domain]  Cd Length: 547  Bit Score: 40.19  E-value: 3.68e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 294 GSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQ-----GLPIpdpsscAQPKSLGPK 368
Cdd:PRK11855  196 AAAPAAAAAPAAAAPAAAAAAAPAPAPAAAAAPAAAAPAAAAAPGKAPHASPAVRRlarelGVDL------SQVKGTGKK 269

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2064674964 369 SR----------RSRAPRPEAAEQVPAAGQGPGPQL 394
Cdd:PRK11855  270 GRitkedvqafvKGAMSAAAAAAAAAAAAGGGGLGL 305
PHA03247 PHA03247
large tegument protein UL36; Provisional
 127-404 7.85e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.54  E-value: 7.85e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  127 PFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPeddilyqwRQRRKLEQAQGSKGDRAWVPPLTPALR 206
Cdd:PHA03247  2710 PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGP--------ARPARPPTTAGPPAPAPPAAPAAGPPR 2781

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  207 TLTSPAPVETLSSLGTQPN-HVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIFwAPSSHGFFWAPQSGPWVSLGAVPPtq 285
Cdd:PHA03247  2782 RLTRPAVASLSESRESLPSpWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA-QPTAPPPPPGPPPPSLPLGGSVAP-- 2858

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964  286 qASTLAHLGSTLAPPASLASTLEPPAS---------TPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDP 356
Cdd:PHA03247  2859 -GGDVRRRPPSRSPAAKPAAPARPPVRrlarpavsrSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPP 2937

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*...
gi 2064674964  357 SSCAQPkslgpksrrsrAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAA 404
Cdd:PHA03247  2938 RPQPPL-----------APTTDPAGAGEPSGAVPQPWLGALVPGRVAV 2974
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
310-503 8.46e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 39.06  E-value: 8.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 310 PASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQG 389
Cdd:PRK07003  360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRG 439

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 390 PGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSvi 469
Cdd:PRK07003  440 DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAS-- 517

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2064674964 470 RKSEATPspgaclqPEVPLSPAEQATTVKASPPA 503
Cdd:PRK07003  518 REDAPAA-------AAPPAPEARPPTPAAAAPAA 544
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 156-304 9.58e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 39.25  E-value: 9.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2064674964 156 PTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRtltspAPVETLsslgTQPNHVPLWSSVAQ 235
Cdd:pfam09770 210 PAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQQPQQPQQHPGQG-----HPVTIL----QRPQSPQPDPAQPS 280

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2064674964 236 PGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQA----STLAHLGSTLAPPASLA 304
Cdd:pfam09770 281 IQPQAQQFHQQPPPVPVQPTQILQNPNRLSAARVGYPQNPQPGVQPAPAHQAhrqqGSFGRQAPIITHPQQLA 353
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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