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Concise Results
Standard Results
Full Results
janus kinase and microtubule-interacting protein 3 isoform h [Homo sapiens]
Protein Classification
SMC_prok_B and JAKMIP_CC3 domain-containing protein ( domain architecture ID 13531091 )
SMC_prok_B and JAKMIP_CC3 domain-containing protein
List of domain hits
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-623
2.69e-83
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 264.82
E-value: 2.69e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 429 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 507
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 508 EYQALQRAYALLQEQ V GGTLDAERE -- TREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 585
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE ak TREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1973438279 586 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 623
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
SMC_prok_B super family
cl37069 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-818
5.27e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
TIGR02168 :Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 60.07
E-value: 5.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 265 relphaagagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L 344
Cdd:TIGR02168 425 ----------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 345 SRKNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYV 424
Cdd:TIGR02168 488 QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKA 561
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 425 KSV L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEG 492
Cdd:TIGR02168 562 IAF L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 493 MA - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE t R E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK wi 565
Cdd:TIGR02168 635 LE l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE - I E E L EEKIEELEEK I AE LEKALAE lrk ELEELE -- 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 566 EE KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK spaisfhhtpfvdgksp L QVYC E AEG 645
Cdd:TIGR02168 712 EE LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE ----------------- L EERL E EAE 774
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 646 VTDIVVAELMKK L DILGDNAVSN L TNEEQVVVI q A R TV LTL AEKWLQQIE E TEAA L Q R KMVDL E SEK E LFSK Q KGY L D E E 725
Cdd:TIGR02168 775 EELAEAEAEIEE L EAQIEQLKEE L KALREALDE - L R AE LTL LNEEAANLR E RLES L E R RIAAT E RRL E DLEE Q IEE L S E D 853
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 726 LDYRKQALDQANKH I L ELE AM L YDA L QQE A GAKV A EL L SEE E R E K L KVAVEQWKRQVMSEL RE RDA qi LRE RMEL L Q L AQ 805
Cdd:TIGR02168 854 IESLAAEIEELEEL I E ELE SE L EAL L NER A SLEE A LA L LRS E L E E L SEELRELESKRSELR RE LEE -- LRE KLAQ L E L RL 931
810
....*....|...
gi 1973438279 806 QRIKELEERIEAQ 818
Cdd:TIGR02168 932 EGLEVRIDNLQER 944
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-623
2.69e-83
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 264.82
E-value: 2.69e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 429 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 507
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 508 EYQALQRAYALLQEQ V GGTLDAERE -- TREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 585
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE ak TREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1973438279 586 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 623
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-818
5.27e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 60.07
E-value: 5.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 265 relphaagagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L 344
Cdd:TIGR02168 425 ----------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 345 SRKNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYV 424
Cdd:TIGR02168 488 QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKA 561
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 425 KSV L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEG 492
Cdd:TIGR02168 562 IAF L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 493 MA - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE t R E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK wi 565
Cdd:TIGR02168 635 LE l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE - I E E L EEKIEELEEK I AE LEKALAE lrk ELEELE -- 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 566 EE KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK spaisfhhtpfvdgksp L QVYC E AEG 645
Cdd:TIGR02168 712 EE LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE ----------------- L EERL E EAE 774
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 646 VTDIVVAELMKK L DILGDNAVSN L TNEEQVVVI q A R TV LTL AEKWLQQIE E TEAA L Q R KMVDL E SEK E LFSK Q KGY L D E E 725
Cdd:TIGR02168 775 EELAEAEAEIEE L EAQIEQLKEE L KALREALDE - L R AE LTL LNEEAANLR E RLES L E R RIAAT E RRL E DLEE Q IEE L S E D 853
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 726 LDYRKQALDQANKH I L ELE AM L YDA L QQE A GAKV A EL L SEE E R E K L KVAVEQWKRQVMSEL RE RDA qi LRE RMEL L Q L AQ 805
Cdd:TIGR02168 854 IESLAAEIEELEEL I E ELE SE L EAL L NER A SLEE A LA L LRS E L E E L SEELRELESKRSELR RE LEE -- LRE KLAQ L E L RL 931
810
....*....|...
gi 1973438279 806 QRIKELEERIEAQ 818
Cdd:TIGR02168 932 EGLEVRIDNLQER 944
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
500-814
1.45e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 58.79
E-value: 1.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 500 L R F R Q L TM E YQA L QRAYA LL Q - EQVGGT L DAERETR E Q L Q AE VQRAQ A RIED LE KA L A E QGQDMK wi E EKQA L YRRNQ E L 578
Cdd:COG1196 213 E R Y R E L KE E LKE L EAELL LL K l RELEAE L EELEAEL E E L E AE LEELE A ELAE LE AE L E E LRLELE -- E LELE L EEAQA E E 290
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 579 V E KIKQMETE E ARLRHEVQDA R DQN E L LE FRIL EL E E R E RKS paisfhhtpfvdgksplqvyc E AEGVTDIVVA E LMKKL 658
Cdd:COG1196 291 Y E LLAELARL E QDIARLEERR R ELE E R LE ELEE EL A E L E EEL --------------------- E ELEEELEELE E ELEEA 349
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 659 DILGDN A VSN L TNE E QVVVIQARTVLTLA E KWLQQI EE TEA AL QRKMVDLESEK EL FSKQKGY L DEELD y RKQA L DQANK 738
Cdd:COG1196 350 EEELEE A EAE L AEA E EALLEAEAELAEAE E ELEELA EE LLE AL RAAAELAAQLE EL EEAEEAL L ERLER - LEEE L EELEE 428
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1973438279 739 HIL ELE AMLYDALQQEAG A KVA E LLS EEE R E K L KVAVEQ w KRQVMSE L RERD A QI L R E RM E LLQLAQQRIKELEER 814
Cdd:COG1196 429 ALA ELE EEEEEEEEALEE A AEE E AEL EEE E E A L LELLAE - LLEEAAL L EAAL A EL L E E LA E AAARLLLLLEAEADY 503
PTZ00121
PTZ00121 MAEBL; Provisional
50-619
8.28e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 43.21
E-value: 8.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 50 E RE K NQEL R QVREHEQHKTAVLLT E LKTKLHEE K MKELQAVR E T ll RQHEA E LLRVIKIKD NE NQ R lqalls ALRDGGPE 129
Cdd:PTZ00121 1192 E LR K AEDA R KAEAARKAEEERKAE E ARKAEDAK K AEAVKKAE E A -- KKDAE E AKKAEEERN NE EI R ------ KFEEARMA 1263
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 130 KVKTVLLSEAK EEA K K GF E VE K VKMQQEIS E L K G A -- K RQVE EA ltlviqad K I KA A E IRSV yhlhq E E ITRIKK E CERE 207
Cdd:PTZ00121 1264 HFARRQAAIKA EEA R K AD E LK K AEEKKKAD E A K K A ee K KKAD EA -------- K K KA E E AKKA ----- D E AKKKAE E AKKK 1330
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 208 IRRLMEEIKFKDR A VFVLER E LGVQ A GH A QRLQLQK EA LDEQLSQVREADRHPGSPRR E LPH A AG A GDASDHSGSPEQQ L 287
Cdd:PTZ00121 1331 ADAAKKKAEEAKK A AEAAKA E AEAA A DE A EAAEEKA EA AEKKKEEAKKKADAAKKKAE E KKK A DE A KKKAEEDKKKADE L 1410
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 288 DEKD A RRFQLKI A ELS A IIR K LE D RNALLS EE RNELLKRVRE AE SQY K PLLD K N K RLSR K NE D LSHALRRMEN K LKFVTQ 367
Cdd:PTZ00121 1411 KKAA A AKKKADE A KKK A EEK K KA D EAKKKA EE AKKADEAKKK AE EAK K AEEA K K K AEEA K KA D EAKKKAEEAK K ADEAKK 1490
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 368 ENI E MRQR A GIIRRPSS ---- LNDLDQSQDEREV D fl KLQIV E QQNLI DE LS K T -------- L ET A GYV K SVL E RD K LLR 435
Cdd:PTZ00121 1491 KAE E AKKK A DEAKKAAE akkk ADEAKKAEEAKKA D -- EAKKA E EAKKA DE AK K A eekkkade L KK A EEL K KAE E KK K AEE 1568
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 436 FR K -- QR K K MA -------- K LPKPVVV E TFFG Y D EE ASLES dgssvsyqtdrtdqtpctpdddl EE GMAK EE TELRFRQ L 505
Cdd:PTZ00121 1569 AK K ae ED K N MA lrkaeeak K AEEARIE E VMKL Y E EE KKMKA ----------------------- EE AKKA EE AKIKAEE L 1625
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 506 TMEYQALQRAYA L LQEQVGGTLD AE RETREQLQAEVQR A Q - A RIEDLE K AL AE QGQDMKWI E E K -- Q AL YRRNQ E L -- V E 580
Cdd:PTZ00121 1626 KKAEEEKKKVEQ L KKKEAEEKKK AE ELKKAEEENKIKA A E e A KKAEED K KK AE EAKKAEED E K K aa E AL KKEAE E A kk A E 1705
570 580 590
....*....|....*....|....*....|....*....
gi 1973438279 581 KI K QM E T EE ARLRH E VQD A RDQ N ELLEFRILELE E RER K 619
Cdd:PTZ00121 1706 EL K KK E A EE KKKAE E LKK A EEE N KIKAEEAKKEA E EDK K 1744
COG2433
COG2433 Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
527-615
1.91e-03
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain]
Cd Length: 644
Bit Score: 41.77
E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 527 L DA E R E TREQ L QAE V Q R AQ A RI E D LE KA L A E QGQDMKWI E EKQALY R RNQELV ---- EK I KQMET E EA RL RH E VQDA R DQ 602
Cdd:COG2433 408 L TE E E E EIRR L EEQ V E R LE A EV E E LE AE L E E KDERIERL E RELSEA R SEERRE irkd RE I SRLDR E IE RL ER E LEEE R ER 487
90
....*....|...
gi 1973438279 603 N E L L EFRILE L E E 615
Cdd:COG2433 488 I E E L KRKLER L K E 500
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-623
2.69e-83
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 264.82
E-value: 2.69e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 429 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 507
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 508 EYQALQRAYALLQEQ V GGTLDAERE -- TREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 585
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE ak TREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1973438279 586 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 623
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-818
5.27e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 60.07
E-value: 5.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 265 relphaagagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L 344
Cdd:TIGR02168 425 ----------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 345 SRKNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYV 424
Cdd:TIGR02168 488 QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKA 561
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 425 KSV L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEG 492
Cdd:TIGR02168 562 IAF L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 493 MA - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE t R E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK wi 565
Cdd:TIGR02168 635 LE l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE - I E E L EEKIEELEEK I AE LEKALAE lrk ELEELE -- 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 566 EE KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK spaisfhhtpfvdgksp L QVYC E AEG 645
Cdd:TIGR02168 712 EE LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE ----------------- L EERL E EAE 774
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 646 VTDIVVAELMKK L DILGDNAVSN L TNEEQVVVI q A R TV LTL AEKWLQQIE E TEAA L Q R KMVDL E SEK E LFSK Q KGY L D E E 725
Cdd:TIGR02168 775 EELAEAEAEIEE L EAQIEQLKEE L KALREALDE - L R AE LTL LNEEAANLR E RLES L E R RIAAT E RRL E DLEE Q IEE L S E D 853
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 726 LDYRKQALDQANKH I L ELE AM L YDA L QQE A GAKV A EL L SEE E R E K L KVAVEQWKRQVMSEL RE RDA qi LRE RMEL L Q L AQ 805
Cdd:TIGR02168 854 IESLAAEIEELEEL I E ELE SE L EAL L NER A SLEE A LA L LRS E L E E L SEELRELESKRSELR RE LEE -- LRE KLAQ L E L RL 931
810
....*....|...
gi 1973438279 806 QRIKELEERIEAQ 818
Cdd:TIGR02168 932 EGLEVRIDNLQER 944
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
500-814
1.45e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 58.79
E-value: 1.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 500 L R F R Q L TM E YQA L QRAYA LL Q - EQVGGT L DAERETR E Q L Q AE VQRAQ A RIED LE KA L A E QGQDMK wi E EKQA L YRRNQ E L 578
Cdd:COG1196 213 E R Y R E L KE E LKE L EAELL LL K l RELEAE L EELEAEL E E L E AE LEELE A ELAE LE AE L E E LRLELE -- E LELE L EEAQA E E 290
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 579 V E KIKQMETE E ARLRHEVQDA R DQN E L LE FRIL EL E E R E RKS paisfhhtpfvdgksplqvyc E AEGVTDIVVA E LMKKL 658
Cdd:COG1196 291 Y E LLAELARL E QDIARLEERR R ELE E R LE ELEE EL A E L E EEL --------------------- E ELEEELEELE E ELEEA 349
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 659 DILGDN A VSN L TNE E QVVVIQARTVLTLA E KWLQQI EE TEA AL QRKMVDLESEK EL FSKQKGY L DEELD y RKQA L DQANK 738
Cdd:COG1196 350 EEELEE A EAE L AEA E EALLEAEAELAEAE E ELEELA EE LLE AL RAAAELAAQLE EL EEAEEAL L ERLER - LEEE L EELEE 428
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1973438279 739 HIL ELE AMLYDALQQEAG A KVA E LLS EEE R E K L KVAVEQ w KRQVMSE L RERD A QI L R E RM E LLQLAQQRIKELEER 814
Cdd:COG1196 429 ALA ELE EEEEEEEEALEE A AEE E AEL EEE E E A L LELLAE - LLEEAAL L EAAL A EL L E E LA E AAARLLLLLEAEADY 503
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
26-618
4.97e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 56.87
E-value: 4.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 26 ED L R A K L TDIQIELQQEKSKVSKV E R E KNQELRQVR E H E QHKTAVL L T EL KTK L H E EK m K EL QAVRET l LRQHE AEL L R V 105
Cdd:COG1196 223 KE L E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAE L E EL RLE L E E LE - L EL EEAQAE - EYELL AEL A R L 300
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 106 IKIKDNENQ R LQA L LSA L RD ggpekvktvl L S E AKE E AKKGF E VEKVKMQQEIS EL KG A KRQV EEA LTLVIQ A DKIKAAE 185
Cdd:COG1196 301 EQDIARLEE R RRE L EER L EE ---------- L E E ELA E LEEEL E ELEEELEELEE EL EE A EEEL EEA EAELAE A EEALLEA 370
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 186 IRS vyhlh QE E ITRIKK E CER E IRRLMEEIKFKDRAVFV LE RELGVQAGHAQ RL QLQK E A L D E Q L SQVR E ADR hpgsprr 265
Cdd:COG1196 371 EAE ----- LA E AEEELE E LAE E LLEALRAAAELAAQLEE LE EAEEALLERLE RL EEEL E E L E E A L AELE E EEE ------- 438
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 266 elphaagagdasdhsgsp E QQLDEKD A RRFQLKIA E LSAIIRK L EDRNALLSEERNEL L KRVR E AESQYKPL L DKNKRLS 345
Cdd:COG1196 439 ------------------ E EEEALEE A AEEEAELE E EEEALLE L LAELLEEAALLEAA L AELL E ELAEAAAR L LLLLEAE 500
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 346 RKN E DLSHALRRMENK lkfvtqeniem RQRA G IIRRPSS L NDLDQS qd EREVDFLK L QIVE Q QNLIDELSKTLETAG Y V K 425
Cdd:COG1196 501 ADY E GFLEGVKAALLL ----------- AGLR G LAGAVAV L IGVEAA -- YEAALEAA L AAAL Q NIVVEDDEVAAAAIE Y L K 567
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 426 S - VLE R DKL L RFR K Q R KKM A KLPKPVVVETFFGY D EE AS LESDGSSVS Y Q - T D RTDQTPCTPDDDLEEGMAKEETEL R F R 503
Cdd:COG1196 568 A a KAG R ATF L PLD K I R ARA A LAAALARGAIGAAV D LV AS DLREADARY Y V l G D TLLGRTLVAARLEAALRRAVTLAG R L R 647
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 504 QL T M E YQALQRAYA L LQEQVGGT L D A ER E TREQ L QAEVQ R AQARIED LE K AL AEQGQDMKWIE E KQALYRRNQELV E KIK 583
Cdd:COG1196 648 EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAE L EELAE R LAEEELE LE E AL LAEEEEERELA E AEEERLEEELEE E ALE 727
570 580 590
....*....|....*....|....*....|....*
gi 1973438279 584 QMETE E ARLRH E VQDARDQNELL E FRILEL E ERER 618
Cdd:COG1196 728 EQLEA E REELL E ELLEEEELLEE E ALEELP E PPDL 762
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
494-821
6.96e-07
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 53.02
E-value: 6.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 494 AK EE TE L RFRQ L TM E YQAL Q RAYAL L QEQVG --- GTLDAER E T R EQ L QAEVQRAQARIED LE KA L A E QGQD mkw I EE KQA 570
Cdd:COG1196 268 EL EE LR L ELEE L EL E LEEA Q AEEYE L LAELA rle QDIARLE E R R RE L EERLEELEEELAE LE EE L E E LEEE --- L EE LEE 344
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 571 LYRRNQ E LV E KIKQMET E EARLRH E VQDARDQN E LLEFRIL E LEERERKS paisfhhtpfvdgksplqvyc E AE GVTDIV 650
Cdd:COG1196 345 ELEEAE E EL E EAEAELA E AEEALL E AEAELAEA E EELEELA E ELLEALRA --------------------- A AE LAAQLE 403
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 651 VA E LMKKLDILGDNAVSNLTN E EQVVVIQARTVLTLA E KW L QQIE E T EA A L QRKMVD L ESEKELFSKQKGY L DEE L DYRK 730
Cdd:COG1196 404 EL E EAEEALLERLERLEEELE E LEEALAELEEEEEEE E EA L EEAA E E EA E L EEEEEA L LELLAELLEEAAL L EAA L AELL 483
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 731 QA L DQ A NKHI L E L EAMLY D ALQQEA G A K V A E LL SEEEREKLK VAV EQWK rqvms E LRERD A QILRERME L LQLAQQRIKE 810
Cdd:COG1196 484 EE L AE A AARL L L L LEAEA D YEGFLE G V K A A L LL AGLRGLAGA VAV LIGV ----- E AAYEA A LEAALAAA L QNIVVEDDEV 558
330
....*....|.
gi 1973438279 811 LEER IE AQ K RQ 821
Cdd:COG1196 559 AAAA IE YL K AA 569
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
45-817
2.56e-05
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 48.14
E-value: 2.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 45 KVSKVER EK N Q E L RQV R EHEQHKTAVL lt E L KTKLH E EKMK EL QAVR E T L L RQ H EA e LL R VIKIKDN E NQR L QALL S A L R 124
Cdd:TIGR02169 188 RLDLIID EK R Q Q L ERL R REREKAERYQ -- A L LKEKR E YEGY EL LKEK E A L E RQ K EA - IE R QLASLEE E LEK L TEEI S E L E 264
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 125 DGGP E KVK tv LL S E AKEEA K KGF E V E KVKMQQE I S EL KG ---- AK R QVE E ALTLVIQ A DK i KA A EIRSVYHLHQE EI TRI 200
Cdd:TIGR02169 265 KRLE E IEQ -- LL E E LNKKI K DLG E E E QLRVKEK I G EL EA eias LE R SIA E KERELED A EE - RL A KLEAEIDKLLA EI EEL 341
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 201 KK E C E R E IR R --- L M EE IKFKDRAVFV L ER EL GVQAGHAQRLQLQKEALD E Q L SQVRE adrhpgsprrelphaagag DAS 277
Cdd:TIGR02169 342 ER E I E E E RK R rdk L T EE YAELKEELED L RA EL EEVDKEFAETRDELKDYR E K L EKLKR ------------------- EIN 402
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 278 DHSGSPEQQLD E K da R R FQLKI A E L S A I I RKL E DRNAL L S EE RNELLKRVREA E SQYKP L LDKNKRLSRKNE DL SHALR R 357
Cdd:TIGR02169 403 ELKRELDRLQE E L -- Q R LSEEL A D L N A A I AGI E AKINE L E EE KEDKALEIKKQ E WKLEQ L AADLSKYEQELY DL KEEYD R 480
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 358 M E NK L KFVTQ E NI E MRQR A GIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTL E T A G ------- Y V KSVLER 430
Cdd:TIGR02169 481 V E KE L SKLQR E LA E AEAQ A RASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAI E V A A gnrlnnv V V EDDAVA 560
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 431 DKLLRFR K Q RK ---------- KM AKLPKPVVVETFF G YDEE A ---- SLESDGSSVSYQTDRTDQTP ctpd D D L E EG mak E 496
Cdd:TIGR02169 561 KEAIELL K R RK agratflpln KM RDERRDLSILSED G VIGF A vdlv EFDPKYEPAFKYVFGDTLVV ---- E D I E AA --- R 633
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 497 ETELRF R QL T M E YQALQRAY A L lqeq V GG TLDAERETREQLQ -- AE V QR AQA R I E D L EKA L AEQGQDMKW IE ek QA L YRR 574
Cdd:TIGR02169 634 RLMGKY R MV T L E GELFEKSG A M ---- T GG SRAPRGGILFSRS ep AE L QR LRE R L E G L KRE L SSLQSELRR IE -- NR L DEL 707
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 575 N QEL VEKIKQMETE E ARLRHEV Q DARDQN E L LE FRILE L EER E RKSPAI sfhhtpfvdg KS P L Q vyc E A E GVTDIVVAE L 654
Cdd:TIGR02169 708 S QEL SDASRKIGEI E KEIEQLE Q EEEKLK E R LE ELEED L SSL E QEIENV ---------- KS E L K --- E L E ARIEELEED L 774
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 655 M K KLDI L G D NAVSNLTNEEQVVVIQARTVLTLAEKWLQQIE E T E AA L Q R KMVD --- LE S E KELFSK Q KGY L D E ELDYRKQ 731
Cdd:TIGR02169 775 H K LEEA L N D LEARLSHSRIPEIQAELSKLEEEVSRIEARLR E I E QK L N R LTLE key LE K E IQELQE Q RID L K E QIKSIEK 854
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 732 ALDQA N KHIL ELE AM L -- YD A LQQEAGAKVAE L LS E EEREKLKVAVEQW K RQVMSELR E RDAQI L R E RMEL L QLAQQRIK 809
Cdd:TIGR02169 855 EIENL N GKKE ELE EE L ee LE A ALRDLESRLGD L KK E RDELEAQLRELER K IEELEAQI E KKRKR L S E LKAK L EALEEELS 934
....*...
gi 1973438279 810 E L E ERIEA 817
Cdd:TIGR02169 935 E I E DPKGE 942
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
285-823
3.80e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 47.62
E-value: 3.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 285 QQ L D E KD A RRFQ LK IA EL S A IIRK LE DRNAL L SE E RN EL LKRVR E A E SQYKP L LDKNKR L SRKN E DLSHALRRMENK L kf 364
Cdd:COG1196 220 EE L K E LE A ELLL LK LR EL E A ELEE LE AELEE L EA E LE EL EAELA E L E AELEE L RLELEE L ELEL E EAQAEEYELLAE L -- 297
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 365 vtq ENI E MRQRAGII RR PSSLND L DQSQD E REV df L KLQIV E QQNLID EL SKT LE T A gyvksvlerdk LLRFRKQRKKM A 444
Cdd:COG1196 298 --- ARL E QDIARLEE RR RELEER L EELEE E LAE -- L EEELE E LEEELE EL EEE LE E A ----------- EEELEEAEAEL A 361
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 445 KL pkpvvvetffgyd EEA S LE SDGSSVSYQTDRTDQT pctp DDD LE EGM A KE E TELRFRQ L TMEYQ AL QRAYAL L Q E QVG 524
Cdd:COG1196 362 EA ------------- EEA L LE AEAELAEAEEELEELA ---- EEL LE ALR A AA E LAAQLEE L EEAEE AL LERLER L E E ELE 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 525 GTLD A ER E TR E QLQA E VQRAQARI E DLEKALA E QGQDMKWIE E KQALYRRNQELVEKIKQMET E E A RLRHEVQD A RDQN E 604
Cdd:COG1196 425 ELEE A LA E LE E EEEE E EEALEEAA E EEAELEE E EEALLELLA E LLEEAALLEAALAELLEELA E A A ARLLLLLE A EADY E 504
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 605 LLEFRILELEERERKSPAISFHHTPFVDGKSP ------- L QVYCEAEG V T D IV VA E -------------------- LMKK 657
Cdd:COG1196 505 GFLEGVKAALLLAGLRGLAGAVAVLIGVEAAY eaaleaa L AAALQNIV V E D DE VA A aaieylkaakagratflpld KIRA 584
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 658 LDI L GDNAVSNLTN --------------------- EEQVVVIQARTV L TL A EKWLQQIEETEAALQRKMVDLESEKE L FS 716
Cdd:COG1196 585 RAA L AAALARGAIG aavdlvasdlreadaryyvlg DTLLGRTLVAAR L EA A LRRAVTLAGRLREVTLEGEGGSAGGS L TG 664
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 717 KQKGY L DEE L DYRKQA L DQANKHIL E L E AM L YD AL QQ E AGAKVAELLS EEER EKLKVAV E Q w KRQVMSEL RE RDAQI L R E 796
Cdd:COG1196 665 GSRRE L LAA L LEAEAE L EELAERLA E E E LE L EE AL LA E EEEERELAEA EEER LEEELEE E A - LEEQLEAE RE ELLEE L L E 743
570 580
....*....|....*....|....*..
gi 1973438279 797 RM ELL QLAQQRIKELEERI E AQK R QIK 823
Cdd:COG1196 744 EE ELL EEEALEELPEPPDL E ELE R ELE 770
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
26-593
6.06e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 46.85
E-value: 6.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 26 E D L R A K L TDIQI EL QQEKSKV skve R E KNQ EL RQVREH E QHKT A V L LTELKTKLHE E KMKELQAV R ETL L RQHE AEL LRV 105
Cdd:COG1196 256 E E L E A E L AELEA EL EELRLEL ---- E E LEL EL EEAQAE E YELL A E L ARLEQDIARL E ERRRELEE R LEE L EEEL AEL EEE 331
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 106 I kik DNENQR L QA L LSA L RDGGP E KVKTVLLSEAK EEA KKGF E V E KVKMQQ E IS EL KG ---- A K R QVE E ALTLVIQADKI 181
Cdd:COG1196 332 L --- EELEEE L EE L EEE L EEAEE E LEEAEAELAEA EEA LLEA E A E LAEAEE E LE EL AE elle A L R AAA E LAAQLEELEEA 408
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 182 KA A EIRSVYH L HQ E EITRIKKEC E R E IRRLM EE IKFKDR A VFVL E R E LGVQ A GHAQRLQ L QK E - AL D E QLSQVREADRHP 260
Cdd:COG1196 409 EE A LLERLER L EE E LEELEEALA E L E EEEEE EE EALEEA A EEEA E L E EEEE A LLELLAE L LE E a AL L E AALAELLEELAE 488
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 261 GSP R RE L PHA A G A GDASDHS G SPEQQ L DEKDARRFQLKI -------------- A E L S A IIRKLEDRNALLSEERN E L LK R 326
Cdd:COG1196 489 AAA R LL L LLE A E A DYEGFLE G VKAAL L LAGLRGLAGAVA vligveaayeaale A A L A A ALQNIVVEDDEVAAAAI E Y LK A 568
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 327 VREAESQYK PL LDKNK R LSRKNEDLSH A LRRMENKLKFVTQ E NIEMRQRA G IIRRPSS L NDLDQSQDE R EVDF L KLQIV E 406
Cdd:COG1196 569 AKAGRATFL PL DKIRA R AALAAALARG A IGAAVDLVASDLR E ADARYYVL G DTLLGRT L VAARLEAAL R RAVT L AGRLR E 648
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 407 QQNLIDEL S KTLETA G YVKSV L ERDK L LRFRKQRKKMAK L pkpvvvetffg YD EE AS LE SDGSSVSYQTDRTDQ tpc TPD 486
Cdd:COG1196 649 VTLEGEGG S AGGSLT G GSRRE L LAAL L EAEAELEELAER L ----------- AE EE LE LE EALLAEEEEERELAE --- AEE 714
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 487 DD LEE GMAK E ET E LRFRQLTM E YQALQRAYAL L Q E QVGGTLDA E RETR E Q L QA E VQ R AQAR IE D L EK -- A LA eqgqdmkw 564
Cdd:COG1196 715 ER LEE ELEE E AL E EQLEAERE E LLEELLEEEE L L E EEALEELP E PPDL E E L ER E LE R LERE IE A L GP vn L LA -------- 786
570 580
....*....|....*....|....*....
gi 1973438279 565 IEE KQA L YR R NQE L V E KIKQM E TEEAR L R 593
Cdd:COG1196 787 IEE YEE L EE R YDF L S E QREDL E EARET L E 815
YhaN
COG4717 Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
488-822
4.51e-04
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain]
Cd Length: 641
Bit Score: 43.99
E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 488 D L E E GMA K E E TE L RFRQ L TM E YQ AL QRAY A L L Q E QVG g T L DAER E TREQ L QA E VQRAQ A RIED L EKA L A E QGQDMKWIE E 567
Cdd:COG4717 113 E L R E ELE K L E KL L QLLP L YQ E LE AL EAEL A E L P E RLE - E L EERL E ELRE L EE E LEELE A ELAE L QEE L E E LLEQLSLAT E 191
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 568 KQA -- L YRRNQ EL VEKIKQM E T E EARLRH E VQDARDQN E L LE FRILELEER ER KSP A ISF hh TPFVDGKSP L QVYCEAEG 645
Cdd:COG4717 192 EEL qd L AEELE EL QQRLAEL E E E LEEAQE E LEELEEEL E Q LE NELEAAALE ER LKE A RLL -- LLIAAALLA L LGLGGSLL 269
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 646 VTDIVV A ELMKKLDI L GDNAVSN L TN E EQVVVIQ A RTVLT L AEKWLQQI EE T E AA L QRKMVDLESEK E LFSKQKGYLD E E 725
Cdd:COG4717 270 SLILTI A GVLFLVLG L LALLFLL L AR E KASLGKE A EELQA L PALEELEE EE L E EL L AALGLPPDLSP E ELLELLDRIE E L 349
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 726 LDYRKQ A LDQANKHI LE LEAMLYD AL QQ EAG AKVA E L L SE ----- EE REK LK VAV E QWKR Q VMSE L R E R ---- D A QILR E 796
Cdd:COG4717 350 QELLRE A EELEEELQ LE ELEQEIA AL LA EAG VEDE E E L RA aleqa EE YQE LK EEL E ELEE Q LEEL L G E L eell E A LDEE E 429
330 340
....*....|....*....|....*.
gi 1973438279 797 RM E L L QLAQQRIK ELEE RI E AQKRQI 822
Cdd:COG4717 430 LE E E L EELEEELE ELEE EL E ELREEL 455
PTZ00121
PTZ00121 MAEBL; Provisional
50-619
8.28e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 43.21
E-value: 8.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 50 E RE K NQEL R QVREHEQHKTAVLLT E LKTKLHEE K MKELQAVR E T ll RQHEA E LLRVIKIKD NE NQ R lqalls ALRDGGPE 129
Cdd:PTZ00121 1192 E LR K AEDA R KAEAARKAEEERKAE E ARKAEDAK K AEAVKKAE E A -- KKDAE E AKKAEEERN NE EI R ------ KFEEARMA 1263
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 130 KVKTVLLSEAK EEA K K GF E VE K VKMQQEIS E L K G A -- K RQVE EA ltlviqad K I KA A E IRSV yhlhq E E ITRIKK E CERE 207
Cdd:PTZ00121 1264 HFARRQAAIKA EEA R K AD E LK K AEEKKKAD E A K K A ee K KKAD EA -------- K K KA E E AKKA ----- D E AKKKAE E AKKK 1330
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 208 IRRLMEEIKFKDR A VFVLER E LGVQ A GH A QRLQLQK EA LDEQLSQVREADRHPGSPRR E LPH A AG A GDASDHSGSPEQQ L 287
Cdd:PTZ00121 1331 ADAAKKKAEEAKK A AEAAKA E AEAA A DE A EAAEEKA EA AEKKKEEAKKKADAAKKKAE E KKK A DE A KKKAEEDKKKADE L 1410
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 288 DEKD A RRFQLKI A ELS A IIR K LE D RNALLS EE RNELLKRVRE AE SQY K PLLD K N K RLSR K NE D LSHALRRMEN K LKFVTQ 367
Cdd:PTZ00121 1411 KKAA A AKKKADE A KKK A EEK K KA D EAKKKA EE AKKADEAKKK AE EAK K AEEA K K K AEEA K KA D EAKKKAEEAK K ADEAKK 1490
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 368 ENI E MRQR A GIIRRPSS ---- LNDLDQSQDEREV D fl KLQIV E QQNLI DE LS K T -------- L ET A GYV K SVL E RD K LLR 435
Cdd:PTZ00121 1491 KAE E AKKK A DEAKKAAE akkk ADEAKKAEEAKKA D -- EAKKA E EAKKA DE AK K A eekkkade L KK A EEL K KAE E KK K AEE 1568
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 436 FR K -- QR K K MA -------- K LPKPVVV E TFFG Y D EE ASLES dgssvsyqtdrtdqtpctpdddl EE GMAK EE TELRFRQ L 505
Cdd:PTZ00121 1569 AK K ae ED K N MA lrkaeeak K AEEARIE E VMKL Y E EE KKMKA ----------------------- EE AKKA EE AKIKAEE L 1625
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 506 TMEYQALQRAYA L LQEQVGGTLD AE RETREQLQAEVQR A Q - A RIEDLE K AL AE QGQDMKWI E E K -- Q AL YRRNQ E L -- V E 580
Cdd:PTZ00121 1626 KKAEEEKKKVEQ L KKKEAEEKKK AE ELKKAEEENKIKA A E e A KKAEED K KK AE EAKKAEED E K K aa E AL KKEAE E A kk A E 1705
570 580 590
....*....|....*....|....*....|....*....
gi 1973438279 581 KI K QM E T EE ARLRH E VQD A RDQ N ELLEFRILELE E RER K 619
Cdd:PTZ00121 1706 EL K KK E A EE KKKAE E LKK A EEE N KIKAEEAKKEA E EDK K 1744
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
26-256
1.34e-03
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 42.06
E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 26 EDLR A K L TDI Q I E LQQEKSKVSKVER E KNQE L R Q VREH E Q hkt AVLLTELKTKLH E EKMKE L Q A V retl L RQH E A E LLRV 105
Cdd:COG4942 23 AEAE A E L EQL Q Q E IAELEKELAALKK E EKAL L K Q LAAL E R --- RIAALARRIRAL E QELAA L E A E ---- L AEL E K E IAEL 95
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 106 IKIKDNENQR L QA LL S AL - R D G GPEKVKTV L LS E AKEE A kkgfevek V KMQ Q EISE L KG A K R QVE E A L TLVIQADKIKA A 184
Cdd:COG4942 96 RAELEAQKEE L AE LL R AL y R L G RQPPLALL L SP E DFLD A -------- V RRL Q YLKY L AP A R R EQA E E L RADLAELAALR A 167
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1973438279 185 E IRS vyhl HQE E ITRIKK E C E R E IRR L MEEIKFKDRAVFV LE R EL GVQ A GHAQR LQ LQK E A L DEQLSQVREA 256
Cdd:COG4942 168 E LEA ---- ERA E LEALLA E L E E E RAA L EALKAERQKLLAR LE K EL AEL A AELAE LQ QEA E E L EALIARLEAE 235
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
495-819
1.80e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 41.97
E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 495 K E ET EL RFRQ L TMEYQA L QRAYAL LQE Q vggt L DAER E TR E Q L Q AE V Q RAQARI E D L EKALA E QG qdmkwi EE KQA L YRR 574
Cdd:TIGR02168 220 A E LR EL ELAL L VLRLEE L REELEE LQE E ---- L KEAE E EL E E L T AE L Q ELEEKL E E L RLEVS E LE ------ EE IEE L QKE 289
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 575 NQE L VEK I KQM E TEEAR LR HEVQDARD Q N E L LE FRIL ELE ERERKSPAIS fhh TPFVDGKSP L QVYC E AE gvtdivv AEL 654
Cdd:TIGR02168 290 LYA L ANE I SRL E QQKQI LR ERLANLER Q L E E LE AQLE ELE SKLDELAEEL --- AELEEKLEE L KEEL E SL ------- EAE 359
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 655 MKK L DILGDNAV S N L TNE E QVVVIQART V LT L aekw LQ QI EETEAALQ R kmvd LE SEK E LFSKQKGY L DE E LDYRKQA L D 734
Cdd:TIGR02168 360 LEE L EAELEELE S R L EEL E EQLETLRSK V AQ L ---- EL QI ASLNNEIE R ---- LE ARL E RLEDRRER L QQ E IEELLKK L E 431
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 735 Q A NKHI L EL E AMLYDALQQ E AGAKVAE L LSEE E REKLKVAVEQWKRQ vmse LR ER DAQI L RE R MEL L QLA Q QRIKELE E R 814
Cdd:TIGR02168 432 E A ELKE L QA E LEELEEELE E LQEELER L EEAL E ELREELEEAEQALD ---- AA ER ELAQ L QA R LDS L ERL Q ENLEGFS E G 507
....*
gi 1973438279 815 IE A QK 819
Cdd:TIGR02168 508 VK A LL 512
COG2433
COG2433 Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
527-615
1.91e-03
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain]
Cd Length: 644
Bit Score: 41.77
E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 527 L DA E R E TREQ L QAE V Q R AQ A RI E D LE KA L A E QGQDMKWI E EKQALY R RNQELV ---- EK I KQMET E EA RL RH E VQDA R DQ 602
Cdd:COG2433 408 L TE E E E EIRR L EEQ V E R LE A EV E E LE AE L E E KDERIERL E RELSEA R SEERRE irkd RE I SRLDR E IE RL ER E LEEE R ER 487
90
....*....|...
gi 1973438279 603 N E L L EFRILE L E E 615
Cdd:COG2433 488 I E E L KRKLER L K E 500
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
523-774
4.29e-03
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 40.52
E-value: 4.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 523 VGGTLD A ERETREQLQ AE VQRA Q AR I ED LEK A LA EQGQDM K WIEEK - Q AL Y RR NQE L VEK I KQM E T E E A R L RH E VQDARD 601
Cdd:COG4942 11 LALAAA A QADAAAEAE AE LEQL Q QE I AE LEK E LA ALKKEE K ALLKQ l A AL E RR IAA L ARR I RAL E Q E L A A L EA E LAELEK 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 602 QNEL L EFRILELE E RERKSPAISFHH tpfv DGKS PL QVYCEA E GVT D ivvaelmkkldilgdn AV SN L TNEEQVVVIQAR 681
Cdd:COG4942 91 EIAE L RAELEAQK E ELAELLRALYRL ---- GRQP PL ALLLSP E DFL D ---------------- AV RR L QYLKYLAPARRE 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973438279 682 TVLT L AEK w L QQIEETE A A L QRKMVD LE SEKELFSKQKGY L DEELDY R KQA L DQAN K HIL EL E A M L YDAL Q QEA -- G A KV 759
Cdd:COG4942 151 QAEE L RAD - L AELAALR A E L EAERAE LE ALLAELEEERAA L EALKAE R QKL L ARLE K ELA EL A A E L AELQ Q EAE el E A LI 229
250
....*....|....*
gi 1973438279 760 A E L LS E EEREKLKVA 774
Cdd:COG4942 230 A R L EA E AAAAAERTP 244
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
