|
Name |
Accession |
Description |
Interval |
E-value |
| GOLGA2L5 |
pfam15070 |
Putative golgin subfamily A member 2-like protein 5; The function of the GOLGA2L5 protein ... |
381-902 |
0e+00 |
|
Putative golgin subfamily A member 2-like protein 5; The function of the GOLGA2L5 protein family remains unknown. This family of proteins is thought to be found in the Golgi apparatus of eukaryotes.
Pssm-ID: 464485 [Multi-domain] Cd Length: 521 Bit Score: 778.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 381 QVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQME--------PPAGP 452
Cdd:pfam15070 1 QLMESLKQLQTERDQYAENLKEEGAVWQQKMQQLSEQVRTLREEKERSVSQVQELETSLAELKNQAAvppaeeeqPPAGP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 453 SEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRA 532
Cdd:pfam15070 81 SEEEQRLQEEAEQLQKELEALAGQLQAQVQDNEQLSRLNQEQEQRLLELERAAERWGEQAEDRKQILEDMQSDRATISRA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 533 LSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGH 612
Cdd:pfam15070 161 LSQNRELKEQLAELQNGFVKLTNENMELTSALQSEQHVKKELAKKLGQLQEELGELKETLELKSQEAQSLQEQRDQYLAH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 613 LQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAHPGEG 692
Cdd:pfam15070 241 LQQYVAAYQQLASEKEELHKQYLLQTQLMDRLQHEEVQGKVAAEMARQELQETQERLEALTQQNQQLQAQLSLLANPGEG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 693 DGLDREEEEDEeeeeeeavaVPQPMPSIPEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQRVRCRRLAHLLASAQKE 772
Cdd:pfam15070 321 DGLESEEEEEE---------APRPSLSIPEDFESREAMVAFFNSALAQAEEERAELRRQLKEQKRRCRRLAQQAAPAQEE 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 773 PEAAAPAPGTGGDSVCGETHRALQGAMEKLQSRFMELMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLK 852
Cdd:pfam15070 392 PEHEAHAPGTGGDSVPVEVHQALQVAMEKLQSRFTELMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAILK 471
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 1955630608 853 ERHREKEEYISRLAQDKEEMKVKLLELQELVLRLVGDRNEWHGRFLAAAQ 902
Cdd:pfam15070 472 QRHREKEEYISRLAQDKEEMKVKLLELQELVLRLVGERNEWYGKYLAAAQ 521
|
|
| GM130_C |
pfam19046 |
GM130 C-terminal binding motif; This entry represents the C-terminal motif from the GM130 ... |
947-992 |
4.07e-26 |
|
GM130 C-terminal binding motif; This entry represents the C-terminal motif from the GM130 protein that is bound by the GRASP65 PDZ domain pfam04495.
Pssm-ID: 465957 Cd Length: 46 Bit Score: 101.31 E-value: 4.07e-26
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 1955630608 947 SPRDNPTAQQIMQLLREMQNPRERPGLGSNPCIPFFYRADENDEVK 992
Cdd:pfam19046 1 SPPENPTAQQIMQLLPEIQNPQEHPGLGSNPCIPFFYRADENDEVK 46
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
265-892 |
9.17e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 92.31 E-value: 9.17e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 265 VGELERALSAVSTQQKKADRYnKELTKERDALRLELYKN-----TQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQ 339
Cdd:COG1196 195 LGELERQLEPLERQAEKAERY-RELKEELKELEAELLLLklrelEAELEELEAELEELEAELEELEAELAELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 340 KKLEMTELLLQQfssrceapdANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAEnlkgESAMWRQRMQQMSEQVH 419
Cdd:COG1196 274 LELEELELELEE---------AQAEEYELLAELARLEQDIARLEERRRELEERLEELEE----ELAELEEELEELEEELE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 420 TLREEKECSMSRVQELETSLAELRnqmeppagpSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNreqeerll 499
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEAE---------EALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE-------- 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 500 eleraaelwgEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGKKLG 579
Cdd:COG1196 404 ----------ELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 580 ELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMAR 659
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 660 QELQETQERLEAATQQNQQLRAQLSlmahpgegdgLDREEEEDEEEEEEEAVAVPQPMPSIPEDLESREAmvafFNSAVA 739
Cdd:COG1196 554 EDDEVAAAAIEYLKAAKAGRATFLP----------LDKIRARAALAAALARGAIGAAVDLVASDLREADA----RYYVLG 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 740 SAEEEQARLRGQLKEQRVRCRRLAHLLASAQKEPEAAAPAPGTGGDSVCGETH------RALQGAMEKLQSRFMELMQEK 813
Cdd:COG1196 620 DTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAalleaeAELEELAERLAEEELELEEAL 699
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1955630608 814 ADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLRLVGDRNE 892
Cdd:COG1196 700 LAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
182-908 |
7.93e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.80 E-value: 7.93e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 182 NLKDLEKQ-----QNQEITDQLEE--------EKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKE 248
Cdd:TIGR02168 201 QLKSLERQaekaeRYKELKAELRElelallvlRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 249 GESEDLASRLQYSRRRVGELERALSAVSTQQKKADRYNKELTKERDALRlelykntQSNEDLKQEKSELEEKLRVLVTEK 328
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELE-------SKLDELAEELAELEEKLEELKEEL 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 329 AGMQLNLEELQKKLEMTELLLQQfsSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKG-ESAMW 407
Cdd:TIGR02168 354 ESLEAELEELEAELEELESRLEE--LEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEElLKKLE 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 408 RQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMEppagpsEVEQQLQAEAEHLrKELEGLAGQLQAQVQDNEGL 487
Cdd:TIGR02168 432 EAELKELQAELEELEEELEELQEELERLEEALEELREELE------EAEQALDAAEREL-AQLQARLDSLERLQENLEGF 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 488 SRLNREQEERLLELERAAELWGEQ--------------------------AEARRQILETM-QND--RTTI----SRALS 534
Cdd:TIGR02168 505 SEGVKALLKNQSGLSGILGVLSELisvdegyeaaieaalggrlqavvvenLNAAKKAIAFLkQNElgRVTFlpldSIKGT 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 535 QNRELKEQLAELQSGFVKLTNE-----------------NMEITSALQSEQHVKRELGKK--LGELQEKLSELKETVELK 595
Cdd:TIGR02168 585 EIQGNDREILKNIEGFLGVAKDlvkfdpklrkalsyllgGVLVVDDLDNALELAKKLRPGyrIVTLDGDLVRPGGVITGG 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 596 SQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLlqtQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQ 675
Cdd:TIGR02168 665 SAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELR---KELEELEEELEQLRKELEELSRQISALRKDLARLEAE 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 676 NQQLRAQLSLMAHPGEGDGLDREEEEDEEEEEEEAVAVpqpmpsIPEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQ 755
Cdd:TIGR02168 742 VEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAE------AEAEIEELEAQIEQLKEELKALREALDELRAELTLL 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 756 RVRCRRLAHLLASAQKEPEAaapapgtggdsvCGETHRALQGAMEKLQSRFMELMQEKADLKERVEELEHRCIQLSGETD 835
Cdd:TIGR02168 816 NEEAANLRERLESLERRIAA------------TERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERA 883
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1955630608 836 TIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLRLVGDRNEWHGRFLAAAQNPADEP 908
Cdd:TIGR02168 884 SLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEA 956
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
265-586 |
7.55e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 79.72 E-value: 7.55e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 265 VGELERALSAVSTQQKKADRYnKELTKERDALRLELYknTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEM 344
Cdd:TIGR02168 195 LNELERQLKSLERQAEKAERY-KELKAELRELELALL--VLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 345 TELLLQQ------------FSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENL---KGESAMWRQ 409
Cdd:TIGR02168 272 LRLEVSEleeeieelqkelYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELaelEEKLEELKE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 410 RMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMeppAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSR 489
Cdd:TIGR02168 352 ELESLEAELEELEAELEELESRLEELEEQLETLRSKV---AQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLK 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 490 LNREQEERLLELERAAELWG-----EQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSAL 564
Cdd:TIGR02168 429 KLEEAELKELQAELEELEEEleelqEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV 508
|
330 340
....*....|....*....|..
gi 1955630608 565 QSEQHVKRELGKKLGELQEKLS 586
Cdd:TIGR02168 509 KALLKNQSGLSGILGVLSELIS 530
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
187-671 |
1.31e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 78.44 E-value: 1.31e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 187 EKQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVG 266
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 267 ELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEmtE 346
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEA--E 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 347 LLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAmwRQRMQQMSEQVHTLREEKE 426
Cdd:COG1196 454 LEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA--ALLLAGLRGLAGAVAVLIG 531
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 427 CSMSRVQELETSLAELRNQmeppaGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLELERAAE 506
Cdd:COG1196 532 VEAAYEAALEAALAAALQN-----IVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAS 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 507 LWGEQAEARRQILETMQ-------NDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGKKLG 579
Cdd:COG1196 607 DLREADARYYVLGDTLLgrtlvaaRLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 580 ELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMAR 659
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELE 766
|
490
....*....|..
gi 1955630608 660 QELQETQERLEA 671
Cdd:COG1196 767 RELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
181-754 |
3.59e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.28 E-value: 3.59e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 181 ANLKDLEKQQNQ-----EITDQLEEEKKECHQKQG-ALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDL 254
Cdd:COG1196 200 RQLEPLERQAEKaeryrELKEELKELEAELLLLKLrELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEEL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 255 ASRLQYSRRRVGELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLN 334
Cdd:COG1196 280 ELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 335 LEELQKKLEMTELLLQQFSSRCEApdANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQM 414
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEE--LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEE 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 415 SEQVHTLREEKECSMSRVQELETSLAELRNQMEPPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQ 494
Cdd:COG1196 438 EEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLA 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 495 EERLLELERAAELWGE---QAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVK 571
Cdd:COG1196 518 GLRGLAGAVAVLIGVEaayEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAI 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 572 RELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQG 651
Cdd:COG1196 598 GAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEA 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 652 KAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAHPGEGDGLDREEEEDEEEEEEEAVAVPQPMPSIPEDLESREAMV 731
Cdd:COG1196 678 EAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELP 757
|
570 580
....*....|....*....|...
gi 1955630608 732 AFFNsaVASAEEEQARLRGQLKE 754
Cdd:COG1196 758 EPPD--LEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
364-675 |
7.30e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.70 E-value: 7.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 364 QLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELR 443
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 444 NQMEPPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEG--------LSRLNREQEERLLELERAAELWGEQAEAR 515
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREaldelraeLTLLNEEAANLRERLESLERRIAATERRL 840
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 516 RQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNE-------NMEITSALQSEQHVKRELGKKLGELQEKLSEL 588
Cdd:TIGR02168 841 EDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNErasleeaLALLRSELEELSEELRELESKRSELRRELEEL 920
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 589 KETVELKSQEAQSLQQQRDqylgHLQQYVAAYQQLTSEK-EVLHNQLLLQTQL----VDQLQQQEAQGKAVAEMARQELQ 663
Cdd:TIGR02168 921 REKLAQLELRLEGLEVRID----NLQERLSEEYSLTLEEaEALENKIEDDEEEarrrLKRLENKIKELGPVNLAAIEEYE 996
|
330
....*....|..
gi 1955630608 664 ETQERLEAATQQ 675
Cdd:TIGR02168 997 ELKERYDFLTAQ 1008
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
265-691 |
1.19e-10 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 65.56 E-value: 1.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 265 VGELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLvtekagmQLNLEELQKKLEM 344
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEEL-------EAELEELREELEK 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 345 TELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREE 424
Cdd:COG4717 121 LEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 425 KECSMSRVQELETSLAELRNQMEP---PAGPSEVEQQLQAEAEHLRKE---LEGLAGQLQAQVQDNEGLSRLNREQEERL 498
Cdd:COG4717 201 LEELQQRLAELEEELEEAQEELEEleeELEQLENELEAAALEERLKEArllLLIAAALLALLGLGGSLLSLILTIAGVLF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 499 LELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQsgfVKLTNENMEITSALQSEQHVKRELgKKL 578
Cdd:COG4717 281 LVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALG---LPPDLSPEELLELLDRIEELQELL-REA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 579 GELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYvAAYQQLTSEKEVLHNQLLLQTQLVDQL--QQQEAQGKAVAE 656
Cdd:COG4717 357 EELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQA-EEYQELKEELEELEEQLEELLGELEELleALDEEELEEELE 435
|
410 420 430
....*....|....*....|....*....|....*
gi 1955630608 657 MARQELQETQERLEAATQQNQQLRAQLSLMAHPGE 691
Cdd:COG4717 436 ELEEELEELEEELEELREELAELEAELEQLEEDGE 470
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
181-881 |
5.67e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.55 E-value: 5.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 181 ANLKDLEKQQnQEITDQLEEEKKECHQKQgALREQLQVHIQTIGilVSEKAELQTALAHTQHAARQKEGESEDLASRLQY 260
Cdd:TIGR02169 244 RQLASLEEEL-EKLTEEISELEKRLEEIE-QLLEELNKKIKDLG--EEEQLRVKEKIGELEAEIASLERSIAEKERELED 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 261 SRRRVGELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQK 340
Cdd:TIGR02169 320 AEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKR 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 341 KLEmtelllqqfSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGEsamwRQRMQQMSEQVHT 420
Cdd:TIGR02169 400 EIN---------ELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQ----EWKLEQLAADLSK 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 421 LREEKECSMSRVQELETSLAELRNQM---EPPAGPSEVEQQLQAEAEH-LRKELEGLAGQ-------------------- 476
Cdd:TIGR02169 467 YEQELYDLKEEYDRVEKELSKLQRELaeaEAQARASEERVRGGRAVEEvLKASIQGVHGTvaqlgsvgeryataievaag 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 477 --LQAQVQDNEG-------------LSR-----LNREQEERLLELERAAELWGEQA-----------EARRQILETmqnd 525
Cdd:TIGR02169 547 nrLNNVVVEDDAvakeaiellkrrkAGRatflpLNKMRDERRDLSILSEDGVIGFAvdlvefdpkyePAFKYVFGD---- 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 526 rTTISRALSQNRELKEQLAelqsgFVKLTNENME----ITS---ALQSEQHVKRELGKKLGELQEKLSELKetvelksQE 598
Cdd:TIGR02169 623 -TLVVEDIEAARRLMGKYR-----MVTLEGELFEksgaMTGgsrAPRGGILFSRSEPAELQRLRERLEGLK-------RE 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 599 AQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLllqtqlvDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQQ 678
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELSDASRKIGEIEKEI-------EQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 679 LRAQLSLMahpgegdgldreeeEDEEEEEEEAVavpqpmpsipEDLESREAMVAF--FNSAVASAEEEQARLRGQLKEQR 756
Cdd:TIGR02169 763 LEARIEEL--------------EEDLHKLEEAL----------NDLEARLSHSRIpeIQAELSKLEEEVSRIEARLREIE 818
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 757 VRCRRLAHLLASAQKEPEAAApapgtggdsvcgETHRALQGAMEKLQSRFMELMQEKADLKERVEELEHRCIQLSGETDT 836
Cdd:TIGR02169 819 QKLNRLTLEKEYLEKEIQELQ------------EQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGD 886
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 1955630608 837 IGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQE 881
Cdd:TIGR02169 887 LKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE 931
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
183-681 |
6.74e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 6.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 183 LKDLEKQQNQ--EITDQLEEEKKECHQKQGALREQLQVHIQTIgilvSEKAELQTALAHTQHAARQKEGESEDLASRLQY 260
Cdd:PRK02224 208 LNGLESELAEldEEIERYEEQREQARETRDEADEVLEEHEERR----EELETLEAEIEDLRETIAETEREREELAEEVRD 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 261 SRRRVGELERALSAV-------STQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQL 333
Cdd:PRK02224 284 LRERLEELEEERDDLlaeagldDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELRE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 334 NLEELQKKLEMTELLLQQFSSRCEAPDAnqQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMwRQRMQQ 413
Cdd:PRK02224 364 EAAELESELEEAREAVEDRREEIEELEE--EIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEAT-LRTARE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 414 MSEQVHTLREEKEC------------------SMSRVQELETSLAELRNQMEppagpsEVEQQLQA--EAEHLRKELEGL 473
Cdd:PRK02224 441 RVEEAEALLEAGKCpecgqpvegsphvetieeDRERVEELEAELEDLEEEVE------EVEERLERaeDLVEAEDRIERL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 474 AGQLQAQVQ-----------DNEGLSRLNreqeERLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQ 542
Cdd:PRK02224 515 EERREDLEEliaerretieeKRERAEELR----ERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIES 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 543 LAELQSGFVKLTNENMEITS---ALQSEQHVKRELGKKLGELQEKLSELKETV-ELKSQEAQSLQQQRDQYLGHLQQYVa 618
Cdd:PRK02224 591 LERIRTLLAAIADAEDEIERlreKREALAELNDERRERLAEKRERKRELEAEFdEARIEEAREDKERAEEYLEQVEEKL- 669
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1955630608 619 ayQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQgkavaemaRQELQETQERLEAATQQNQQLRA 681
Cdd:PRK02224 670 --DELREERDDLQAEIGAVENELEELEELRER--------REALENRVEALEALYDEAEELES 722
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
178-447 |
1.32e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.30 E-value: 1.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 178 ASSANLKDLEKQQNQEITDqLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASR 257
Cdd:TIGR02168 740 AEVEQLEERIAQLSKELTE-LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEE 818
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 258 LQYSRRRVGELERALSAVSTQqkkadryNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEE 337
Cdd:TIGR02168 819 AANLRERLESLERRIAATERR-------LEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALAL 891
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 338 LQKKLEmtELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGqvmesvrQLQMERDKYAENLKGESAMwrqrMQQMSEQ 417
Cdd:TIGR02168 892 LRSELE--ELSEELRELESKRSELRRELEELREKLAQLELRLE-------GLEVRIDNLQERLSEEYSL----TLEEAEA 958
|
250 260 270
....*....|....*....|....*....|
gi 1955630608 418 VHTLREEKEcsmsrvQELETSLAELRNQME 447
Cdd:TIGR02168 959 LENKIEDDE------EEARRRLKRLENKIK 982
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
180-870 |
4.16e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.37 E-value: 4.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 180 SANLKDLEKQQN--QEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASR 257
Cdd:TIGR02168 322 EAQLEELESKLDelAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 258 LQYSRRRV----GELERALSAVSTQQKKADRYNKELTKER-DALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQ 332
Cdd:TIGR02168 402 IERLEARLerleDRRERLQQEIEELLKKLEEAELKELQAElEELEEELEELQEELERLEEALEELREELEEAEQALDAAE 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 333 LNLEELQKKLEMTELLLQQFSSRCEApdanqqLQQAMEERAQLEAHLGQVMESVR------------------QLQMERD 394
Cdd:TIGR02168 482 RELAQLQARLDSLERLQENLEGFSEG------VKALLKNQSGLSGILGVLSELISvdegyeaaieaalggrlqAVVVENL 555
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 395 KYA--------ENLKGESAMW---RQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMEPPAGPSEVEQQLQAEA 463
Cdd:TIGR02168 556 NAAkkaiaflkQNELGRVTFLpldSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNAL 635
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 464 E-------------------------------------HLRKELEGLAGQLQAQVQDNEGLSRlnreqeerlleleraae 506
Cdd:TIGR02168 636 ElakklrpgyrivtldgdlvrpggvitggsaktnssilERRREIEELEEKIEELEEKIAELEK----------------- 698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 507 lwgEQAEARRQiLETMQNDRTTISRALsqnRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGKKLGELQEKLS 586
Cdd:TIGR02168 699 ---ALAELRKE-LEELEEELEQLRKEL---EELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLE 771
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 587 ELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQ 666
Cdd:TIGR02168 772 EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELS 851
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 667 ERLEAATQQNQQLRAQLSLMAhpgegDGLDREEeedeeeeeeeavavpqpmpsipEDLESREAMVAFFNSAVASAEEEQA 746
Cdd:TIGR02168 852 EDIESLAAEIEELEELIEELE-----SELEALL----------------------NERASLEEALALLRSELEELSEELR 904
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 747 RLRGQLKEQRVRCRRLAHLLASAQKEPEAAApapgtggdsvcGETHRALQGAMEKLQSRFMELMQEKADLKERVEELEHR 826
Cdd:TIGR02168 905 ELESKRSELRRELEELREKLAQLELRLEGLE-----------VRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRR 973
|
730 740 750 760
....*....|....*....|....*....|....*....|....*...
gi 1955630608 827 CIQLSGETDTIGEY----IALYQSqravLKERHREKEEYISRLAQDKE 870
Cdd:TIGR02168 974 LKRLENKIKELGPVnlaaIEEYEE----LKERYDFLTAQKEDLTEAKE 1017
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
248-684 |
8.02e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.59 E-value: 8.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 248 EGESEDLASRLQYSRRRVGELERALSAVSTQQKKADRynkelTKERDALRLELYKNTQSN-EDLKQEKSELEEKLRVLVT 326
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIERYEEQREQARE-----TRDEADEVLEEHEERREElETLEAEIEDLRETIAETER 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 327 EKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQQ-LQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESA 405
Cdd:PRK02224 273 EREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEaVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDAD 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 406 MWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMEPPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNE 485
Cdd:PRK02224 353 DLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 486 G-LSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISralsqnrELKEQLAELQSGFVKLTNENMEITSAL 564
Cdd:PRK02224 433 AtLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVE-------ELEAELEDLEEEVEEVEERLERAEDLV 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 565 QSEQHVKReLGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKE-------VLHNQLLLQ 637
Cdd:PRK02224 506 EAEDRIER-LEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEeareevaELNSKLAEL 584
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1955630608 638 TQLVDQLQQQEAQGKAVAEmARQELQETQERLEAATQQNQQLRAQLS 684
Cdd:PRK02224 585 KERIESLERIRTLLAAIAD-AEDEIERLREKREALAELNDERRERLA 630
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
194-671 |
1.22e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.89 E-value: 1.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 194 ITDQLEEEKKECHQKQGALreqLQVHIQTIGILVSEKAELQTALAHTQHAAR------QKEGESEDLASRLQYSR--RRV 265
Cdd:pfam15921 243 VEDQLEALKSESQNKIELL---LQQHQDRIEQLISEHEVEITGLTEKASSARsqansiQSQLEIIQEQARNQNSMymRQL 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 266 GELERALSAVSTQQKKADRYNK----ELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTE--KAGMQLNLEELQ 339
Cdd:pfam15921 320 SDLESTVSQLRSELREAKRMYEdkieELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADlhKREKELSLEKEQ 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 340 KKlemtELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLgQVMESVRQLQMERDKYAENLKGESamwrqrMQQMSEQVH 419
Cdd:pfam15921 400 NK----RLWDRDTGNSITIDHLRRELDDRNMEVQRLEALL-KAMKSECQGQMERQMAAIQGKNES------LEKVSSLTA 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 420 TLREEKECSMSRVQELETSLAELRNQMEPPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLL 499
Cdd:pfam15921 469 QLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQT 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 500 ELERAAELWGEQ---AEARRQILETMQNDRTTISRALSQNRELKEQLAElqsgfvKLTNENMEitsaLQSEQHVKRELGK 576
Cdd:pfam15921 549 ECEALKLQMAEKdkvIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEK------EINDRRLE----LQEFKILKDKKDA 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 577 KLGELQEKLSELK-ETVEL------KSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQlvdQLQQQEA 649
Cdd:pfam15921 619 KIRELEARVSDLElEKVKLvnagseRLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSE---EMETTTN 695
|
490 500
....*....|....*....|..
gi 1955630608 650 QGKAVAEMARQELQETQERLEA 671
Cdd:pfam15921 696 KLKMQLKSAQSELEQTRNTLKS 717
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
280-682 |
1.26e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.80 E-value: 1.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 280 KKADRYNKELTKERDalrlELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAP 359
Cdd:TIGR04523 138 KNIDKFLTEIKKKEK----ELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKN 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 360 DA---------------NQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLkgesamwrQRMQQMSEQVHTLREE 424
Cdd:TIGR04523 214 KSlesqiselkkqnnqlKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQL--------SEKQKELEQNNKKIKE 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 425 KEcsmSRVQELETSLAELRNQMEppagpSEVEQQLQAEAEHLRKELEGLAGQLqaqVQDNEGLSRLNreqeerllelera 504
Cdd:TIGR04523 286 LE---KQLNQLKSEISDLNNQKE-----QDWNKELKSELKNQEKKLEEIQNQI---SQNNKIISQLN------------- 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 505 aelwgeqaearrqilETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGKKLGELQEK 584
Cdd:TIGR04523 342 ---------------EQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKL 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 585 LSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQE 664
Cdd:TIGR04523 407 NQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ 486
|
410
....*....|....*...
gi 1955630608 665 TQERLEAATQQNQQLRAQ 682
Cdd:TIGR04523 487 KQKELKSKEKELKKLNEE 504
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
422-854 |
1.83e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.46 E-value: 1.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 422 REEKECSMSRVQELETSLAELRNQMEppagpseveqQLQAEAEHLRKELEglagqLQAQVQDNEGLSRLNreqeerllel 501
Cdd:TIGR02169 176 LEELEEVEENIERLDLIIDEKRQQLE----------RLRREREKAERYQA-----LLKEKREYEGYELLK---------- 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 502 eraaelwgEQAEARRQIlETMQNDRTTISRALSQNRELKEQLA-ELQSGFVKLTNENMEITSALQSEQhvkRELGKKLGE 580
Cdd:TIGR02169 231 --------EKEALERQK-EAIERQLASLEEELEKLTEEISELEkRLEEIEQLLEELNKKIKDLGEEEQ---LRVKEKIGE 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 581 LQEKLSELKETVELKSQEAQSLQQQRdqylghlQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQ 660
Cdd:TIGR02169 299 LEAEIASLERSIAEKERELEDAEERL-------AKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRA 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 661 ELQETQERLEAATQQNQQLRAQLSLMAHpgEGDGLDREEEEDEeeeeeeavavpqpmpsipEDLESREAMVAFFNSAVAS 740
Cdd:TIGR02169 372 ELEEVDKEFAETRDELKDYREKLEKLKR--EINELKRELDRLQ------------------EELQRLSEELADLNAAIAG 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 741 AEEEQARLRGQLKEQRVRCRRLAHLLASAQKEpeaaapapgtggdsvcgethralqgaMEKLQSRFMELMQEKADLKERV 820
Cdd:TIGR02169 432 IEAKINELEEEKEDKALEIKKQEWKLEQLAAD--------------------------LSKYEQELYDLKEEYDRVEKEL 485
|
410 420 430
....*....|....*....|....*....|....
gi 1955630608 821 EELEHRCIQLSGETDTIGEYIALYQSQRAVLKER 854
Cdd:TIGR02169 486 SKLQRELAEAEAQARASEERVRGGRAVEEVLKAS 519
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
178-668 |
2.51e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.68 E-value: 2.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 178 ASSANLKDLEKQQNQEITDQLEE--EKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLA 255
Cdd:PRK03918 186 KRTENIEELIKEKEKELEEVLREinEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 256 SRLQYSRRRVGELERALSAVSTQQKKADRYnKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAgmqlNL 335
Cdd:PRK03918 266 ERIEELKKEIEELEEKVKELKELKEKAEEY-IKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEE----RL 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 336 EELQKKLEMTELLLQQFSSRCEapdANQQLQQAMEERAQLEAHLG--------QVMESVRQLQMERDKYAENLKGESAMW 407
Cdd:PRK03918 341 EELKKKLKELEKRLEELEERHE---LYEEAKAKKEELERLKKRLTgltpekleKELEELEKAKEEIEEEISKITARIGEL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 408 RQRMQQMSEQVHTLREEK-ECSM--------SRVQELETSLAELRNQMEPPAGPSEVEQQLQAEAEHLRKELEGlagqlq 478
Cdd:PRK03918 418 KKEIKELKKAIEELKKAKgKCPVcgrelteeHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKK------ 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 479 aqvqdNEGLSRLNREQeerlleleraaelwgEQAEARRQILETMqnDRTTISRALSQNRELKEQLAELqSGFVKLTNENM 558
Cdd:PRK03918 492 -----ESELIKLKELA---------------EQLKELEEKLKKY--NLEELEKKAEEYEKLKEKLIKL-KGEIKSLKKEL 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 559 EITSALQSEqhvKRELGKKLGELQEKLSELKEtvELKSQEAQSLQQQrDQYLGHLQQYVAAYQQLT---SEKEVLHNQLL 635
Cdd:PRK03918 549 EKLEELKKK---LAELEKKLDELEEELAELLK--ELEELGFESVEEL-EERLKELEPFYNEYLELKdaeKELEREEKELK 622
|
490 500 510
....*....|....*....|....*....|...
gi 1955630608 636 LQTQLVDQLQQQEAQGKAVAEMARQELQETQER 668
Cdd:PRK03918 623 KLEEELDKAFEELAETEKRLEELRKELEELEKK 655
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
230-685 |
3.56e-07 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 54.53 E-value: 3.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 230 KAELQTALahtQHAARQKEGESEDLASrlqysrrrVGELERALSAVstqqKKADRYNKELtkerDALRLELyknTQSNED 309
Cdd:PRK11281 38 EADVQAQL---DALNKQKLLEAEDKLV--------QQDLEQTLALL----DKIDRQKEET----EQLKQQL---AQAPAK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 310 LKQEKSELE--EKLRVLVTEKAGMQLNLEELQKKLEmtELLLQQFSSRCEAPDANQQL--QQAMEERAQLEahlgqvmes 385
Cdd:PRK11281 96 LRQAQAELEalKDDNDEETRETLSTLSLRQLESRLA--QTLDQLQNAQNDLAEYNSQLvsLQTQPERAQAA--------- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 386 vrqlqmerdkYAENLkgesamwrQRMQQMSEQVHTLREEKE-CSMSRVQELETSLAELRNQMEPPAGPSEVEQQLQAEAE 464
Cdd:PRK11281 165 ----------LYANS--------QRLQQIRNLLKGGKVGGKaLRPSQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQ 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 465 HLRKELEGLAGQLQAQVQDNEGLsrLNREQEERLLELEraaelwgEQAEARRQILETMQNDrtTISRALSQNRELKEQLA 544
Cdd:PRK11281 227 KQRDYLTARIQRLEHQLQLLQEA--INSKRLTLSEKTV-------QEAQSQDEAARIQANP--LVAQELEINLQLSQRLL 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 545 ELQSGFVKLTNENMEIT----SALQSEQHVKRE---------LGKKLGELQEKLSELKETVELKSQEAQ------SLQQQ 605
Cdd:PRK11281 296 KATEKLNTLTQQNLRVKnwldRLTQSERNIKEQisvlkgsllLSRILYQQQQALPSADLIEGLADRIADlrleqfEINQQ 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 606 RDQyLGHLQQYVAAYQQLTSEK--EVLHNQLLlqtQLVDqlqqqeaqgkavaemARQELQEtqerleaatQQNQQLRAQL 683
Cdd:PRK11281 376 RDA-LFQPDAYIDKLEAGHKSEvtDEVRDALL---QLLD---------------ERRELLD---------QLNKQLNNQL 427
|
..
gi 1955630608 684 SL 685
Cdd:PRK11281 428 NL 429
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
187-473 |
4.10e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 54.30 E-value: 4.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 187 EKQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAhtqhaarqkEGESEDLASRLQYSRRRVG 266
Cdd:TIGR02169 731 EEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALN---------DLEARLSHSRIPEIQAELS 801
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 267 ELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEmte 346
Cdd:TIGR02169 802 KLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALR--- 878
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 347 lllqqfssrceapDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYaenlkgesamwRQRMQQMSEQVHTLREEke 426
Cdd:TIGR02169 879 -------------DLESRLGDLKKERDELEAQLRELERKIEELEAQIEKK-----------RKRLSELKAKLEALEEE-- 932
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1955630608 427 csmsrvqelETSLAELRNQMEPPAGPSEVEQQLQAEAEHLRKELEGL 473
Cdd:TIGR02169 933 ---------LSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRAL 970
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
262-476 |
8.69e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 8.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 262 RRRVGELERALSAVSTQQKKADRYNkelTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKK 341
Cdd:COG4913 248 REQIELLEPIRELAERYAAARERLA---ELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREE 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 342 LEMTELLLQQFSSRCEApDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTL 421
Cdd:COG4913 325 LDELEAQIRGNGGDRLE-QLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEAL 403
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1955630608 422 REEkecsmsrvqeletsLAELRNQmeppagpsevEQQLQAEAEHLRKELEGLAGQ 476
Cdd:COG4913 404 EEA--------------LAEAEAA----------LRDLRRELRELEAEIASLERR 434
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
228-628 |
1.44e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.45 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 228 SEKAELQTALAHTQHAARQKEGE----SEDLASRLQYSRRRVGELERALSAvstqQKKADRYNKELTKERDALRL----- 298
Cdd:PTZ00121 1366 AEAAEKKKEEAKKKADAAKKKAEekkkADEAKKKAEEDKKKADELKKAAAA----KKKADEAKKKAEEKKKADEAkkkae 1441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 299 ------ELYKNTQSNEDLKQEKSELEEKLRV-LVTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEE 371
Cdd:PTZ00121 1442 eakkadEAKKKAEEAKKAEEAKKKAEEAKKAdEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEA 1521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 372 RAQLEAHLGQVMESVRQL-QMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQEL---ETSLAELRNQME 447
Cdd:PTZ00121 1522 KKADEAKKAEEAKKADEAkKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAkkaEEARIEEVMKLY 1601
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 448 PPAGPSEVEQQLQAE-----AEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLELERAAELWGEQAEARRQI--LE 520
Cdd:PTZ00121 1602 EEEKKMKAEEAKKAEeakikAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAeeAK 1681
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 521 TMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGKKLGELQEKLSELKETVELKSQEAQ 600
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAH 1761
|
410 420
....*....|....*....|....*...
gi 1955630608 601 SLQQQRDQYLGHLQQYVAAYQQLTSEKE 628
Cdd:PTZ00121 1762 LKKEEEKKAEEIRKEKEAVIEEELDEED 1789
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
415-832 |
1.75e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 52.27 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 415 SEQVHTLREEKECSMSRVQELETSLAELRNQMEPPAG-PSEVEQQLQAEAEHLRKELEGLAGQLQ---AQVQDNEGLSRL 490
Cdd:PRK04863 285 LEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEaESDLEQDYQAASDHLNLVQTALRQQEKierYQADLEELEERL 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 491 NreqeerlleleraaelwgEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFvkltneNMEITSALQSEQHV 570
Cdd:PRK04863 365 E------------------EQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQAL------DVQQTRAIQYQQAV 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 571 KR-ELGKKLGEL----QEKLSELKETVELKSQEAQ----SLQQQRDQYLGHLQQYVAAYQqltsekevlhnqllLQTQLV 641
Cdd:PRK04863 421 QAlERAKQLCGLpdltADNAEDWLEEFQAKEQEATeellSLEQKLSVAQAAHSQFEQAYQ--------------LVRKIA 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 642 DQLQQQEAQGKAvaemarQELQETQERLEAATQQNQQLRAQLSLMAHpgegdglDREEEEDEEEEEEEAVAVPQPMPSIP 721
Cdd:PRK04863 487 GEVSRSEAWDVA------RELLRRLREQRHLAEQLQQLRMRLSELEQ-------RLRQQQRAERLLAEFCKRLGKNLDDE 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 722 EDLES----REAMVAFFNSAVASAEEEQARLRGQLKEQRVRCRRLAHLLASAQKEPEAAAPAPGTGGDSVcgETHRALQG 797
Cdd:PRK04863 554 DELEQlqeeLEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEF--EDSQDVTE 631
|
410 420 430
....*....|....*....|....*....|....*
gi 1955630608 798 AMEKLQSRFMELMQEKADLKERVEELEHRCIQLSG 832
Cdd:PRK04863 632 YMQQLLERERELTVERDELAARKQALDEEIERLSQ 666
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
229-690 |
2.59e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 51.88 E-value: 2.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 229 EKAELQTALAHTQHAARQKEGESEDlasRLQYSRRRVGELERALSAVSTQ-QKKADRYNKELTKERDALRLELYKntqsn 307
Cdd:COG3096 282 ELSERALELRRELFGARRQLAEEQY---RLVEMARELEELSARESDLEQDyQAASDHLNLVQTALRQQEKIERYQ----- 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 308 EDLkqekSELEEKLRVLVTEKAGMQLNLEELQKKLEMTEL----LLQQFSSRCEAPDANQ----QLQQAMeeraqleahl 379
Cdd:COG3096 354 EDL----EELTERLEEQEEVVEEAAEQLAEAEARLEAAEEevdsLKSQLADYQQALDVQQtraiQYQQAV---------- 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 380 gQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQmeppAGPSEVEQQL 459
Cdd:COG3096 420 -QALEKARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKI----AGEVERSQAW 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 460 QAEAEHLRKeleglAGQLQAQVQDNEGLSRlnreqeerlleleraaelwgEQAEARRQiletmqndrttisraLSQNREL 539
Cdd:COG3096 495 QTARELLRR-----YRSQQALAQRLQQLRA--------------------QLAELEQR---------------LRQQQNA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 540 KEQLAELQSGFvkltneNMEITSALqseqhvkrelgkklgELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAA 619
Cdd:COG3096 535 ERLLEEFCQRI------GQQLDAAE---------------ELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRAR 593
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1955630608 620 YQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAV----AEMARQELQETQERLEAAtQQNQQLRAQLSLMAHPG 690
Cdd:COG3096 594 IKELAARAPAWLAAQDALERLREQSGEALADSQEVtaamQQLLEREREATVERDELA-ARKQALESQIERLSQPG 667
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
196-670 |
3.57e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.92 E-value: 3.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 196 DQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGELERALSAV 275
Cdd:COG4717 49 ERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 276 stqqkkadrynkELTKERDALRLELYKNTQSNEDLKQEKSELEEklrvLVTEKAGMQLNLEELQKKLEmTELLLQQFSSR 355
Cdd:COG4717 129 ------------PLYQELEALEAELAELPERLEELEERLEELRE----LEEELEELEAELAELQEELE-ELLEQLSLATE 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 356 CEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQEL 435
Cdd:COG4717 192 EELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 436 ETSLAE----------LRNQMEPPAGPSEVEQQLQAEAEHLRKELEGLA-GQLQAQVQDNEGLSRLNREQEERLLELERA 504
Cdd:COG4717 272 ILTIAGvlflvlgllaLLFLLLAREKASLGKEAEELQALPALEELEEEElEELLAALGLPPDLSPEELLELLDRIEELQE 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 505 AELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQS---------EQHVKRELG 575
Cdd:COG4717 352 LLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEEllgeleellEALDEEELE 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 576 KKLGELQEKLSELKETVELKSQEAQSLQQQRDQyLGHLQQYVAAYQQLTSEKEVLhnqlllqtqlvdqlqQQEAQGKAVA 655
Cdd:COG4717 432 EELEELEEELEELEEELEELREELAELEAELEQ-LEEDGELAELLQELEELKAEL---------------RELAEEWAAL 495
|
490
....*....|....*
gi 1955630608 656 EMARQELQETQERLE 670
Cdd:COG4717 496 KLALELLEEAREEYR 510
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
308-483 |
5.34e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 5.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 308 EDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEA---HLGQVME 384
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDAssdDLAALEE 692
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 385 SVRQLQMERDKYAE---NLKGESAMWRQRMQQMSEQVHTLREEKE-CSMSRVQELETSLAELRNQMEPPAGPSEVEQQLQ 460
Cdd:COG4913 693 QLEELEAELEELEEeldELKGEIGRLEKELEQAEEELDELQDRLEaAEDLARLELRALLEERFAAALGDAVERELRENLE 772
|
170 180
....*....|....*....|...
gi 1955630608 461 AEAEHLRKELEGLAGQLQAQVQD 483
Cdd:COG4913 773 ERIDALRARLNRAEEELERAMRA 795
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
180-885 |
6.46e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.50 E-value: 6.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 180 SANLKDLEKQQNqeitdqleeEKKECHQKQGALREQLQVHIQTigilvsEKAELQTALAHTQHAARQKEGESEDLASRLQ 259
Cdd:pfam15921 84 SHQVKDLQRRLN---------ESNELHEKQKFYLRQSVIDLQT------KLQEMQMERDAMADIRRRESQSQEDLRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 260 YSrrrVGELERALSAVSTQQKKADRYNKELTK-------------------ERDALRLELYKNTQSNEDLKQEKSELEEK 320
Cdd:pfam15921 149 NT---VHELEAAKCLKEDMLEDSNTQIEQLRKmmlshegvlqeirsilvdfEEASGKKIYEHDSMSTMHFRSLGSAISKI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 321 LRVLVTEKAGMQLNLEELQKKLEM--------TELLLQQFSSRCEapdanQQLQQAMEERAQLEAHLGQVMESVRQLQME 392
Cdd:pfam15921 226 LRELDTEISYLKGRIFPVEDQLEAlksesqnkIELLLQQHQDRIE-----QLISEHEVEITGLTEKASSARSQANSIQSQ 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 393 RDKYAENLKGESAMWRQRMQQMSEQVHTLREE----KECSMSRVQELETSLAELRNQMeppagpseveqqlqAEAEHLRK 468
Cdd:pfam15921 301 LEIIQEQARNQNSMYMRQLSDLESTVSQLRSElreaKRMYEDKIEELEKQLVLANSEL--------------TEARTERD 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 469 ELEGLAGQLQAQVQdnEGLSRLNREQEERLLELERAAELWGEQAEARRQI--LETMQNDRTT-ISRALSQNRELKEQLA- 544
Cdd:pfam15921 367 QFSQESGNLDDQLQ--KLLADLHKREKELSLEKEQNKRLWDRDTGNSITIdhLRRELDDRNMeVQRLEALLKAMKSECQg 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 545 --ELQSGFVKLTNENMEITSALQSEQHVKRELGKKLGE----------------------LQEK----------LSELKE 590
Cdd:pfam15921 445 qmERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEeltakkmtlessertvsdltasLQEKeraieatnaeITKLRS 524
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 591 TVELKSQEAQSLQQQRDqYLGHLQQYVAAYQQLTSEK----EVLHNQLLLQTQLVDQ-------LQQQEAQGKAVAEMAR 659
Cdd:pfam15921 525 RVDLKLQELQHLKNEGD-HLRNVQTECEALKLQMAEKdkviEILRQQIENMTQLVGQhgrtagaMQVEKAQLEKEINDRR 603
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 660 QELQETQERLEAATQQNQQLRAQLSLMAhpgegdgLDREEEEDEEEEEEEAVA-VPQPMPSIPEDLESREAMVaffNSAV 738
Cdd:pfam15921 604 LELQEFKILKDKKDAKIRELEARVSDLE-------LEKVKLVNAGSERLRAVKdIKQERDQLLNEVKTSRNEL---NSLS 673
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 739 ASAEEEQARLRGQLKEQRVRCRRLAHLLASAQKEPEAA----APAPGTGGDSV-----CGETHRALQGAMEKLQSRFMEL 809
Cdd:pfam15921 674 EDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTrntlKSMEGSDGHAMkvamgMQKQITAKRGQIDALQSKIQFL 753
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 810 MQ-------EKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEeyisrLAQDKEEMkvKLLELQEL 882
Cdd:pfam15921 754 EEamtnankEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANME-----VALDKASL--QFAECQDI 826
|
...
gi 1955630608 883 VLR 885
Cdd:pfam15921 827 IQR 829
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
181-683 |
7.01e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.30 E-value: 7.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 181 ANLKDLEKQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTI-GILVSEKAELQTALAHTQHAARQKEGESEDLASRLq 259
Cdd:COG4913 290 LELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIrGNGGDRLEQLEREIERLERELEERERRRARLEALL- 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 260 ysrRRVG-ELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEK----AGMQLN 334
Cdd:COG4913 369 ---AALGlPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKsnipARLLAL 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 335 LEELQKKLEMT--------ELLlqqfssrcEAPDANQQLQQAME-----ERAQL---EAHLGQVMESVRQLQMerdkyae 398
Cdd:COG4913 446 RDALAEALGLDeaelpfvgELI--------EVRPEEERWRGAIErvlggFALTLlvpPEHYAAALRWVNRLHL------- 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 399 nlkgesamwRQRMQqmSEQVHTLREEKEcsmsRVQELETSLAELRNQMEPPAGPsEVEQQLQAEAEHLR----KEL--EG 472
Cdd:COG4913 511 ---------RGRLV--YERVRTGLPDPE----RPRLDPDSLAGKLDFKPHPFRA-WLEAELGRRFDYVCvdspEELrrHP 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 473 LAGQLQAQVQDNEGLSRLNreqeerllELERAAELW--GEQAEARRQILE----TMQNDRTTISRALSQNRELKEQLAEL 546
Cdd:COG4913 575 RAITRAGQVKGNGTRHEKD--------DRRRIRSRYvlGFDNRAKLAALEaelaELEEELAEAEERLEALEAELDALQER 646
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 547 QSGFVKLTNENMEITSALQSEQHVkRELGKKLGELQE---KLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQL 623
Cdd:COG4913 647 REALQRLAEYSWDEIDVASAEREI-AELEAELERLDAssdDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQA 725
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 624 TSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQQLRAQL 683
Cdd:COG4913 726 EEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRA 785
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
453-683 |
8.33e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.63 E-value: 8.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 453 SEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSrlnreqeerlleleraaelwgeQAEARRQILETMQNDRTTISRA 532
Cdd:COG3206 174 RKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVD----------------------LSEEAKLLLQQLSELESQLAEA 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 533 LSQNRELKEQLAELQSgfvKLTNENMEITSALQSEqhVKRELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGH 612
Cdd:COG3206 232 RAELAEAEARLAALRA---QLGSGPDALPELLQSP--VIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQ 306
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1955630608 613 LQQYVA-AYQQLTSEKEVLHNQLllqTQLVDQLQQQEAQGKAVAEmARQELQETQERLEAATQQNQQLRAQL 683
Cdd:COG3206 307 LQQEAQrILASLEAELEALQARE---ASLQAQLAQLEARLAELPE-LEAELRRLEREVEVARELYESLLQRL 374
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
178-661 |
9.67e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.58 E-value: 9.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 178 ASSANLKDLEKQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTqHAARQKEGESEDLASR 257
Cdd:TIGR00618 451 AQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHP-NPARQDIDNPGPLTRR 529
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 258 LQYSRRRVGELERALSAVSTQ----QKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLvtekagmQL 333
Cdd:TIGR00618 530 MQRGEQTYAQLETSEEDVYHQltseRKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLT-------EK 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 334 NLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQlQMERDKYAENLKGESAMWRQR--- 410
Cdd:TIGR00618 603 LSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQ-ERVREHALSIRVLPKELLASRqla 681
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 411 ---MQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMEppagpsEVEQQLQAEAEHLRKELEGLAGQLQaqvqdnegl 487
Cdd:TIGR00618 682 lqkMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFN------EIENASSSLGSDLAAREDALNQSLK--------- 746
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 488 srlnreqeerlleleraaelwgeqaEARRQILETMQndrttiSRALSQNRELKEQLAELQSGfvkltnenmeitsalQSE 567
Cdd:TIGR00618 747 -------------------------ELMHQARTVLK------ARTEAHFNNNEEVTAALQTG---------------AEL 780
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 568 QHVKRELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQL-LLQTQLVDQLQQ 646
Cdd:TIGR00618 781 SHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEItHQLLKYEECSKQ 860
|
490
....*....|....*
gi 1955630608 647 QEAQGKAVAEMARQE 661
Cdd:TIGR00618 861 LAQLTQEQAKIIQLS 875
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
315-663 |
1.00e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.68 E-value: 1.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 315 SELEEKLRVLVTEKAgMQLNLEELQKKL---EMTELLLqqfssrcEAPDANQQLQQAMEERAQLEAHLGQVMEsvrQLQM 391
Cdd:TIGR02169 194 DEKRQQLERLRRERE-KAERYQALLKEKreyEGYELLK-------EKEALERQKEAIERQLASLEEELEKLTE---EISE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 392 ERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMEPPAgpsEVEQQLQAEAEHLRKELE 471
Cdd:TIGR02169 263 LEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAE---ERLAKLEAEIDKLLAEIE 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 472 GLAGQLQAQVQDNEGLS--------RLNrEQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQL 543
Cdd:TIGR02169 340 ELEREIEEERKRRDKLTeeyaelkeELE-DLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 544 AElqsgfvKLTNENMEITSALQseqhvkrelgkKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQL 623
Cdd:TIGR02169 419 SE------ELADLNAAIAGIEA-----------KINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRV 481
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1955630608 624 TSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQ 663
Cdd:TIGR02169 482 EKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQ 521
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
408-836 |
1.25e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 49.57 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 408 RQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMEP-PAGPSEVEQQLQAEAEHLRKELEGLAGQ--LQAQVQDN 484
Cdd:COG3096 277 ANERRELSERALELRRELFGARRQLAEEQYRLVEMARELEElSARESDLEQDYQAASDHLNLVQTALRQQekIERYQEDL 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 485 EGLS-RLNreqeerlleleraaelwgEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFvkltneNMEITSA 563
Cdd:COG3096 357 EELTeRLE------------------EQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQAL------DVQQTRA 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 564 LQSEQHVKR-ELGKKLGEL--------QEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSekevlhnql 634
Cdd:COG3096 413 IQYQQAVQAlEKARALCGLpdltpenaEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCK--------- 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 635 llqtqLVDQLQQQEAQGKAvaemarQELQETQERLEAATQQNQQLRAQLSlmahpgEGDGLDREEEEDEEEEEEEAVAVP 714
Cdd:COG3096 484 -----IAGEVERSQAWQTA------RELLRRYRSQQALAQRLQQLRAQLA------ELEQRLRQQQNAERLLEEFCQRIG 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 715 QPMPS---IPEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQRVRCRRLAhllasaQKEPE-AAAPAPGTGGDSVCGE 790
Cdd:COG3096 547 QQLDAaeeLEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELA------ARAPAwLAAQDALERLREQSGE 620
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1955630608 791 T---HRALQGAMEKLQSRFMELMQEKADLKERVEELE---HRCIQLSGETDT 836
Cdd:COG3096 621 AladSQEVTAAMQQLLEREREATVERDELAARKQALEsqiERLSQPGGAEDP 672
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
259-478 |
1.75e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.86 E-value: 1.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 259 QYSRRRVGELERALSAVSTQqkkADRYNKELTKERDALR--LELYKNTQSNEDLK---QEKSELEEKLRVLVTEKAGMQL 333
Cdd:COG3206 164 QNLELRREEARKALEFLEEQ---LPELRKELEEAEAALEefRQKNGLVDLSEEAKlllQQLSELESQLAEARAELAEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 334 NLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKgesamwrqrmQQ 413
Cdd:COG3206 241 RLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQ----------QE 310
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1955630608 414 MSEQVHTLREEKECSMSRVQELETSLAELRNQMeppAGPSEVEQQ---LQAEAEHLRKELEGLAGQLQ 478
Cdd:COG3206 311 AQRILASLEAELEALQAREASLQAQLAQLEARL---AELPELEAElrrLEREVEVARELYESLLQRLE 375
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
241-826 |
1.99e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 48.80 E-value: 1.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 241 QHAARQKEGESED---LASRLQYSRRRVGELERALSAVSTQQKKADRYNKELTKerdalrlelykNTQSNEDLKQEKSEL 317
Cdd:PRK04863 495 WDVARELLRRLREqrhLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGK-----------NLDDEDELEQLQEEL 563
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 318 EEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQQFSSRC----EAPDANQQLQ----QAMEERAQLEAHLGQVMESVRQL 389
Cdd:PRK04863 564 EARLESLSESVSEARERRMALRQQLEQLQARIQRLAARApawlAAQDALARLReqsgEEFEDSQDVTEYMQQLLEREREL 643
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 390 QMERDKYAEnlkgesamwrqRMQQMSEQVHTLREEKECSMSRVQELE-----TSLAELRNQM--------EPPAGPSE-- 454
Cdd:PRK04863 644 TVERDELAA-----------RKQALDEEIERLSQPGGSEDPRLNALAerfggVLLSEIYDDVsledapyfSALYGPARha 712
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 455 -VEQQLQAEAEHLrKELEGLAGQLQAQVQDNEGL--SRLNREQEERLLELERAAELW-----------GEqaEARRQILE 520
Cdd:PRK04863 713 iVVPDLSDAAEQL-AGLEDCPEDLYLIEGDPDSFddSVFSVEELEKAVVVKIADRQWrysrfpevplfGR--AAREKRIE 789
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 521 TMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVkRELGKKLGELQEKLSELKETVelksqeaq 600
Cdd:PRK04863 790 QLRAEREELAERYATLSFDVQKLQRLHQAFSRFIGSHLAVAFEADPEAEL-RQLNRRRVELERALADHESQE-------- 860
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 601 slQQQRDQYLgHLQQYVAAYQQLTSEKEVLHNQLL------LQTQLvDQLQQQEA----QGKAVAEMARQ--ELQETQER 668
Cdd:PRK04863 861 --QQQRSQLE-QAKEGLSALNRLLPRLNLLADETLadrveeIREQL-DEAEEAKRfvqqHGNALAQLEPIvsVLQSDPEQ 936
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 669 LEAATQQNQQLRAQLSLMAhpGEGDGLDREEEEDEEEEEEEAVavpqpmpsipEDLESREAMVAFFNSAVASAEEEQARL 748
Cdd:PRK04863 937 FEQLKQDYQQAQQTQRDAK--QQAFALTEVVQRRAHFSYEDAA----------EMLAKNSDLNEKLRQRLEQAEQERTRA 1004
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1955630608 749 RGQLKEQRVRCRRLAHLLASAQKEPEAAApapgtggdsvcgETHRALQGAMEKLQSRFMELMQEKAdlKERVEELEHR 826
Cdd:PRK04863 1005 REQLRQAQAQLAQYNQVLASLKSSYDAKR------------QMLQELKQELQDLGVPADSGAEERA--RARRDELHAR 1068
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
187-688 |
3.07e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.04 E-value: 3.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 187 EKQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQ--HAARQKEGESEDLASRLQ----Y 260
Cdd:TIGR00618 185 EFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQqsHAYLTQKREAQEEQLKKQqllkQ 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 261 SRRRVGELERALSAVSTQQKKADRYNKELtkerdALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQK 340
Cdd:TIGR00618 265 LRARIEELRAQEAVLEETQERINRARKAA-----PLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSS 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 341 KLEMTELLLQQFSSRCEAPDANQQ-------------LQQAMEERAQLEAHLGQVMESVRQ----LQMERDKYAENLKGE 403
Cdd:TIGR00618 340 IEEQRRLLQTLHSQEIHIRDAHEVatsireiscqqhtLTQHIHTLQQQKTTLTQKLQSLCKeldiLQREQATIDTRTSAF 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 404 SAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMEPPAGPSEVEQQLQAEAEHLRKELE--GLAGQLQAQV 481
Cdd:TIGR00618 420 RDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRkkAVVLARLLEL 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 482 QDNEGL---SRLNREQEERLLELERAAELWGEQAEARRQILET-MQNDRTTISRALSQNRELKEQLAELQSGFVKLT--- 554
Cdd:TIGR00618 500 QEEPCPlcgSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETsEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTqcd 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 555 NENMEITSALQSEQHVKRELGKKLGELQEKLSELKETVELKSQEAQSLQQqrdqylghlqqyVAAYQQLTSEKEVLHNQL 634
Cdd:TIGR00618 580 NRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQD------------VRLHLQQCSQELALKLTA 647
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 1955630608 635 LLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAH 688
Cdd:TIGR00618 648 LHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQ 701
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
571-826 |
4.13e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 4.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 571 KRELGKKLGELQEKLSELKETvelkSQEAQSLQQQRDQyLGHLQQYVAAYQQLTSEKEVLhnQLLLQTQLVDQLQQQEAQ 650
Cdd:COG4913 220 EPDTFEAADALVEHFDDLERA----HEALEDAREQIEL-LEPIRELAERYAAARERLAEL--EYLRAALRLWFAQRRLEL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 651 GKAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAHPGEGDGLDREeeedeeeeeeeavavpqpmpsipEDLESReam 730
Cdd:COG4913 293 LEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRL-----------------------EQLERE--- 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 731 vaffnsaVASAEEEQARLRGQLKEQRVRCRRL-------AHLLASAQKEPEAAAPApgtggdsvCGETHRALQGAMEKLQ 803
Cdd:COG4913 347 -------IERLERELEERERRRARLEALLAALglplpasAEEFAALRAEAAALLEA--------LEEELEALEEALAEAE 411
|
250 260
....*....|....*....|...
gi 1955630608 804 SRFMELMQEKADLKERVEELEHR 826
Cdd:COG4913 412 AALRDLRRELRELEAEIASLERR 434
|
|
| HpsJ_fam |
NF038305 |
HpsJ family protein; HpsJ (hormogornium polysaccharide J) is thought to be involved in the ... |
591-678 |
1.04e-04 |
|
HpsJ family protein; HpsJ (hormogornium polysaccharide J) is thought to be involved in the biosynthesis or secretion of an extracellular polysaccharide shared by many Cyanobacteria.
Pssm-ID: 468465 [Multi-domain] Cd Length: 230 Bit Score: 44.88 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 591 TVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVlhNQLL--------------LQTQLVDQLQQQEAQGKAVAE 656
Cdd:NF038305 102 TRRLSTQALQQINQQAGQQETQLQQQLNQLQAQTSPQQL--NQLLkseqkqgqalasgqLPEEQKEQLQQFKSNPQALDK 179
|
90 100
....*....|....*....|..
gi 1955630608 657 MARQELQETQERLEAATQQNQQ 678
Cdd:NF038305 180 FLAQQLTQIRTQAEEAEKQARL 201
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
188-683 |
1.14e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.17 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 188 KQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIgilvSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGE 267
Cdd:TIGR04523 224 KKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLK----DEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISD 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 268 LERALSAVSTQQKKADRYNKEltKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKL----- 342
Cdd:TIGR04523 300 LNNQKEQDWNKELKSELKNQE--KKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIeklkk 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 343 EMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEahlgQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLR 422
Cdd:TIGR04523 378 ENQSYKQEIKNLESQINDLESKIQNQEKLNQQKD----EQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 423 EEkecsmsrVQELETSLAELRNQMEppagpseveqQLQAEAEHLRKELEGLAGQLQAQVQDnegLSRLNreqeerllele 502
Cdd:TIGR04523 454 LI-------IKNLDNTRESLETQLK----------VLSRSINKIKQNLEQKQKELKSKEKE---LKKLN----------- 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 503 raaelwgeqaEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQhvkreLGKKLGELQ 582
Cdd:TIGR04523 503 ----------EEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKEN-----LEKEIDEKN 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 583 EKLSELKETVELKSQEAQSLQQQRDQYlghlqqyvaayqqlTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQEL 662
Cdd:TIGR04523 568 KEIEELKQTQKSLKKKQEEKQELIDQK--------------EKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSII 633
|
490 500
....*....|....*....|.
gi 1955630608 663 QETQERLEAATQQNQQLRAQL 683
Cdd:TIGR04523 634 KNIKSKKNKLKQEVKQIKETI 654
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
287-597 |
1.38e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 287 KELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLvtekAGMQLNLEELQKKLEMTELLLQQFSSRCEapdanqQLQ 366
Cdd:PRK03918 172 KEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREI----NEISSELPELREELEKLEKEVKELEELKE------EIE 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 367 QAMEERAQLEAHLGQVMESVRQLQMERDKYAENLK--GESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRN 444
Cdd:PRK03918 242 ELEKELESLEGSKRKLEEKIRELEERIEELKKEIEelEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 445 QMEppagpsEVEQQLQ------AEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLELERAAELWGEQAEARrqi 518
Cdd:PRK03918 322 EIN------GIEERIKeleekeERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKE--- 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 519 LETMQNDRTTISRALSqnrELKEQLAELQSGFVKLTNENMEITSA---------LQSEQHVKRELGKKLGELQEKLSELK 589
Cdd:PRK03918 393 LEELEKAKEEIEEEIS---KITARIGELKKEIKELKKAIEELKKAkgkcpvcgrELTEEHRKELLEEYTAELKRIEKELK 469
|
....*...
gi 1955630608 590 ETVELKSQ 597
Cdd:PRK03918 470 EIEEKERK 477
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
234-871 |
1.39e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.19 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 234 QTALAHTQHAARQKEGESEDLASRL---QYSRRRVGELERALSAVSTQQKKADRYNKELT-------------------- 290
Cdd:TIGR00606 230 EAQLESSREIVKSYENELDPLKNRLkeiEHNLSKIMKLDNEIKALKSRKKQMEKDNSELElkmekvfqgtdeqlndlyhn 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 291 ---------KERDALRLELYKNTQSNEDLKQEKSELEeklrvlvTEKAGMQLNLEELQKKLEMTELLLQQFSSRCE---- 357
Cdd:TIGR00606 310 hqrtvrekeRELVDCQRELEKLNKERRLLNQEKTELL-------VEQGRLQLQADRHQEHIRARDSLIQSLATRLEldgf 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 358 --APDANQQLQQA-------MEERAQLEAHL-GQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLR----- 422
Cdd:TIGR00606 383 erGPFSERQIKNFhtlvierQEDEAKTAAQLcADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKfvike 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 423 -EEKECSMSRVQELETSLAELRNQMePPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLEL 501
Cdd:TIGR00606 463 lQQLEGSSDRILELDQELRKAEREL-SKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLT 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 502 ERAAELWGEQAEARRQILETMQN------DRTTISRALSQNRELKEQLAElqsgfvKLTNENMEITSALQSEQHVKRELG 575
Cdd:TIGR00606 542 KDKMDKDEQIRKIKSRHSDELTSllgyfpNKKQLEDWLHSKSKEINQTRD------RLAKLNKELASLEQNKNHINNELE 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 576 KK---LGELQEKLSELKETVELKS------QEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQ 646
Cdd:TIGR00606 616 SKeeqLSSYEDKLFDVCGSQDEESdlerlkEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQE 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 647 QEAQGKAVAEMARQELQETQERLeaatqQNQQLRAQLSLMAHPGEGDGLDREEEEDEEEEEEEAvAVPQPMPSIPEDLES 726
Cdd:TIGR00606 696 FISDLQSKLRLAPDKLKSTESEL-----KKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQ-KVNRDIQRLKNDIEE 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 727 REAMVAFFNSAVASAEEEQA------RLRGQLKEQRvrcRRLAHLLASAQkepeaaapapGTGGDSVCGETHRALQGAME 800
Cdd:TIGR00606 770 QETLLGTIMPEEESAKVCLTdvtimeRFQMELKDVE---RKIAQQAAKLQ----------GSDLDRTVQQVNQEKQEKQH 836
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1955630608 801 KLQ---SRFMELMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEE 871
Cdd:TIGR00606 837 ELDtvvSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQ 910
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
226-686 |
1.47e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.87 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 226 LVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGELERALSAVSTQQKKADRYNKELTKERDALR--LELYKN 303
Cdd:pfam05483 83 LYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRhlCNLLKE 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 304 TQSNEDLKQEKSELEEKlrvlVTEKAGMQLNLEELQKKLEMTELLLQQfssrceapdanqqlqqameERAQLEAH--LGQ 381
Cdd:pfam05483 163 TCARSAEKTKKYEYERE----ETRQVYMDLNNNIEKMILAFEELRVQA-------------------ENARLEMHfkLKE 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 382 VMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELEtslaelrnqmEPPAGPSEVEQQLQA 461
Cdd:pfam05483 220 DHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLE----------EKTKLQDENLKELIE 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 462 EAEHLRKELEGLAGQLQAQVQDNEGLsrlnreqEERLLELERAAELWGEQAEARrqiLETMQNDRTTISRALSQNRELKE 541
Cdd:pfam05483 290 KKDHLTKELEDIKMSLQRSMSTQKAL-------EEDLQIATKTICQLTEEKEAQ---MEELNKAKAAHSFVVTEFEATTC 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 542 QLAELqsgfvkLTNENMEITSALQSEQHVKRELGKKLGELQEkLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQ 621
Cdd:pfam05483 360 SLEEL------LRTEQQRLEKNEDQLKIITMELQKKSSELEE-MTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAE 432
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1955630608 622 QLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQQLRAQLSLM 686
Cdd:pfam05483 433 ELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKL 497
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
243-609 |
1.55e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.83 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 243 AARQKEGESEDLASRLQYSRRRVGELERALSAVSTQQKKADRynkeltkERDALRLELYKNTQSNEDLKQEKSELEEKLR 322
Cdd:TIGR02169 661 APRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEN-------RLDELSQELSDASRKIGEIEKEIEQLEQEEE 733
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 323 VLVTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDAnqQLQQAMEERAQLEAHLGqvMESVRQLQMERDKyaenLKG 402
Cdd:TIGR02169 734 KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEE--DLHKLEEALNDLEARLS--HSRIPEIQAELSK----LEE 805
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 403 ESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQmeppagpsevEQQLQAEAEHLRKELEGLAGQL---QA 479
Cdd:TIGR02169 806 EVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQ----------IKSIEKEIENLNGKKEELEEELeelEA 875
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 480 QVQDNEGlsrlnreqeeR----LLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQsgfvKLTN 555
Cdd:TIGR02169 876 ALRDLES----------RlgdlKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIE----DPKG 941
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1955630608 556 ENMEITSALQSEQHVKRELGKKLGELQ-----------------EKLSELKETVELKSQEAQSLQQQRDQY 609
Cdd:TIGR02169 942 EDEEIPEEELSLEDVQAELQRVEEEIRalepvnmlaiqeyeevlKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
637-886 |
1.62e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 637 QTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAhpgegdgldreeeedeeeeeeeavavpqp 716
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALA----------------------------- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 717 mpsipEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQRvrcRRLAHLLASAQKEPEAAAPAPGTGGDSVcgethRALQ 796
Cdd:COG4942 69 -----RRIRALEQELAALEAELAELEKEIAELRAELEAQK---EELAELLRALYRLGRQPPLALLLSPEDF-----LDAV 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 797 GAMEKLQSRFMELMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKL 876
Cdd:COG4942 136 RRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAEL 215
|
250
....*....|
gi 1955630608 877 LELQELVLRL 886
Cdd:COG4942 216 AELQQEAEEL 225
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
243-424 |
1.95e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 1.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 243 AARQKEGESEDLASRLQY--SRRRVGELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLK-QEKSELEE 319
Cdd:COG4913 266 AARERLAELEYLRAALRLwfAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGgDRLEQLER 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 320 KLRVLVTEKAGMQLNLEELQKKLEMTELLL----QQFSSRCEApdANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDK 395
Cdd:COG4913 346 EIERLERELEERERRRARLEALLAALGLPLpasaEEFAALRAE--AAALLEALEEELEALEEALAEAEAALRDLRRELRE 423
|
170 180
....*....|....*....|....*....
gi 1955630608 396 yaenLKGESAMWRQRMQQMSEQVHTLREE 424
Cdd:COG4913 424 ----LEAEIASLERRKSNIPARLLALRDA 448
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
361-680 |
2.12e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.34 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 361 ANQQLQQAMEERAQLEAHLGQVmESVRQLQMERDKYAENLKGESAMWRQRMQQMS----EQVHTLREEKECSMSRVQELE 436
Cdd:TIGR00618 154 FAQFLKAKSKEKKELLMNLFPL-DQYTQLALMEFAKKKSLHGKAELLTLRSQLLTlctpCMPDTYHERKQVLEKELKHLR 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 437 TSLAELR---NQMEPPAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEglsRLNREQEERLLELERAAELWGEQAe 513
Cdd:TIGR00618 233 EALQQTQqshAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQE---RINRARKAAPLAAHIKAVTQIEQQ- 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 514 aRRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTN---ENMEITSALQSEQHVKRELGKKLGELQE--KLSEL 588
Cdd:TIGR00618 309 -AQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTlhsQEIHIRDAHEVATSIREISCQQHTLTQHihTLQQQ 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 589 KETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQER 668
Cdd:TIGR00618 388 KTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQS 467
|
330
....*....|..
gi 1955630608 669 LEAATQQNQQLR 680
Cdd:TIGR00618 468 LKEREQQLQTKE 479
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
192-681 |
2.16e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.10 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 192 QEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKaELQTALAHTQhaARQKEGESEDLASRLQYSRRRVGELERA 271
Cdd:pfam05483 200 EELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDK-EKQVSLLLIQ--ITEKENKMKDLTFLLEESRDKANQLEEK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 272 LSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKagmQLNLEELQKKLEMTELLLQQ 351
Cdd:pfam05483 277 TKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEK---EAQMEELNKAKAAHSFVVTE 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 352 F-SSRCEAPDANQQLQQAMEERAqleahlgqvmESVRQLQMERDKYAENLkgesamwrqrmqqmsEQVHTLREEKECSMs 430
Cdd:pfam05483 354 FeATTCSLEELLRTEQQRLEKNE----------DQLKIITMELQKKSSEL---------------EEMTKFKNNKEVEL- 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 431 rvQELETSLAELRNQMEPpagpsevEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLsrlnreqEERLLELERAAELWGE 510
Cdd:pfam05483 408 --EELKKILAEDEKLLDE-------KKQFEKIAEELKGKEQELIFLLQAREKEIHDL-------EIQLTAIKTSEEHYLK 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 511 QAEARRQILETMQNDRTTIS----RALSQNRELKEQLAELQsgfVKLTNENMEITSALQSEQhvkrELGKKLGELQEKLS 586
Cdd:pfam05483 472 EVEDLKTELEKEKLKNIELTahcdKLLLENKELTQEASDMT---LELKKHQEDIINCKKQEE----RMLKQIENLEEKEM 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 587 ELKETVELKSQEaqsLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQ-EAQGKAVAEMArqelQET 665
Cdd:pfam05483 545 NLRDELESVREE---FIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQiENKNKNIEELH----QEN 617
|
490
....*....|....*.
gi 1955630608 666 QERLEAATQQNQQLRA 681
Cdd:pfam05483 618 KALKKKGSAENKQLNA 633
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
269-886 |
2.53e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.06 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 269 ERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNlEELQKKLEMTELL 348
Cdd:TIGR02169 222 EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE-EQLRVKEKIGELE 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 349 LQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVrqlqmerdkyaENLKGESAMWRQRMQQMSEQVHTLREEKECS 428
Cdd:TIGR02169 301 AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEI-----------EELEREIEEERKRRDKLTEEYAELKEELEDL 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 429 MSRVQELETSLAELRnqmeppagpseveqqlqAEAEHLRKELEGLAgqlqaqvqdneglSRLNREQEERLLELERAAELW 508
Cdd:TIGR02169 370 RAELEEVDKEFAETR-----------------DELKDYREKLEKLK-------------REINELKRELDRLQEELQRLS 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 509 GEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEItSALQSEQhvkRELGKKLGELQEKLSEL 588
Cdd:TIGR02169 420 EELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQEL-YDLKEEY---DRVEKELSKLQRELAEA 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 589 KETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEvlHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQEtqER 668
Cdd:TIGR02169 496 EAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGE--RYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKR--RK 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 669 LEAAT----QQNQQLRAQLSLMAHPG-----------------------------------------------EGDGLDR 697
Cdd:TIGR02169 572 AGRATflplNKMRDERRDLSILSEDGvigfavdlvefdpkyepafkyvfgdtlvvedieaarrlmgkyrmvtlEGELFEK 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 698 EEE-----EDEEEEEEEAVAVPQPMPSIPEDLESREAMVAFF-----------NSAVASAEEEQARLR------GQLKEQ 755
Cdd:TIGR02169 652 SGAmtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLqselrrienrlDELSQELSDASRKIGeiekeiEQLEQE 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 756 RVRCRRLAHLLASAQKEPEAAAPAPGTGGDSVCGETHR------ALQGAMEKL-----QSRFMELMQEKADLKE------ 818
Cdd:TIGR02169 732 EEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEEleedlhKLEEALNDLearlsHSRIPEIQAELSKLEEevsrie 811
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1955630608 819 -RVEELEHRCIQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLRL 886
Cdd:TIGR02169 812 aRLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDL 880
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
510-683 |
2.76e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 510 EQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLtnenmeitsALQSEQHVKRELGKKLGELQEKLSELK 589
Cdd:COG4913 245 EDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQR---------RLELLEAELEELRAELARLEAELERLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 590 ETVELKSQEAQSLQQQRDQY-LGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQER 668
Cdd:COG4913 316 ARLDALREELDELEAQIRGNgGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEA 395
|
170
....*....|....*
gi 1955630608 669 LEAATQQNQQLRAQL 683
Cdd:COG4913 396 LEEELEALEEALAEA 410
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
182-447 |
3.21e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 44.63 E-value: 3.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 182 NLKDLEKQQN---QEITDQlEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRL 258
Cdd:TIGR04523 385 EIKNLESQINdleSKIQNQ-EKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTR 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 259 QYSRRRVGELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEEL 338
Cdd:TIGR04523 464 ESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDL 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 339 QKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDkyaeNLKGESAMWRQRMQQMSEQV 418
Cdd:TIGR04523 544 EDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKK----DLIKEIEEKEKKISSLEKEL 619
|
250 260
....*....|....*....|....*....
gi 1955630608 419 HTLREEKECSMSRVQELETSLAELRNQME 447
Cdd:TIGR04523 620 EKAKKENEKLSSIIKNIKSKKNKLKQEVK 648
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
184-377 |
3.70e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 3.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 184 KDLEKQQNQEitDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQhaaRQKEGESEDLASRLQ--YS 261
Cdd:COG4942 41 KELAALKKEE--KALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR---AELEAQKEELAELLRalYR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 262 RRRVGELERALSAVSTQQK-KADRYNKELTKERDALRLELyknTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQK 340
Cdd:COG4942 116 LGRQPPLALLLSPEDFLDAvRRLQYLKYLAPARREQAEEL---RADLAELAALRAELEAERAELEALLAELEEERAALEA 192
|
170 180 190
....*....|....*....|....*....|....*..
gi 1955630608 341 KLEMTELLLQQFSSrcEAPDANQQLQQAMEERAQLEA 377
Cdd:COG4942 193 LKAERQKLLARLEK--ELAELAAELAELQQEAEELEA 227
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
207-480 |
4.18e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 4.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 207 QKQGALREQLQvhiqtigilvsekaELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGELERALSAVSTQQKKADRYN 286
Cdd:COG4942 20 DAAAEAEAELE--------------QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 287 KELTKERDALRlelykntqsnEDLKQEKSELEEKLRVLvtEKAGMQLNLeelqkklemtELLLQQFSSRcEAPDANQQLQ 366
Cdd:COG4942 86 AELEKEIAELR----------AELEAQKEELAELLRAL--YRLGRQPPL----------ALLLSPEDFL-DAVRRLQYLK 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 367 QAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKgesamwrQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQM 446
Cdd:COG4942 143 YLAPARREQAEELRADLAELAALRAELEAERAELE-------ALLAELEEERAALEALKAERQKLLARLEKELAELAAEL 215
|
250 260 270
....*....|....*....|....*....|....
gi 1955630608 447 eppagpseveQQLQAEAEHLRKELEGLAGQLQAQ 480
Cdd:COG4942 216 ----------AELQQEAEELEALIARLEAEAAAA 239
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
538-684 |
5.21e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.85 E-value: 5.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 538 ELKEQLAELQSGFVKLTNENMEITSALQSEQHVKR--ELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGH--L 613
Cdd:COG3206 186 ELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQlsELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSpvI 265
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1955630608 614 QQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKA-VAEMARQELQETQERLEAATQQNQQLRAQLS 684
Cdd:COG3206 266 QQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAqLQQEAQRILASLEAELEALQAREASLQAQLA 337
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
408-615 |
5.30e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 5.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 408 RQRMQQMSEQVHTLREEKEcSMSRVQELETSLAELRNQME--PPAGPSEVEQQLQAEAEHLRKELEGLAGQL-QAQVQDN 484
Cdd:COG4913 241 HEALEDAREQIELLEPIRE-LAERYAAARERLAELEYLRAalRLWFAQRRLELLEAELEELRAELARLEAELeRLEARLD 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 485 EGLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALsqnRELKEQLAELQSGFVKLTNENMEITSAL 564
Cdd:COG4913 320 ALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALL---AALGLPLPASAEEFAALRAEAAALLEAL 396
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1955630608 565 QSEQHvkrELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQ 615
Cdd:COG4913 397 EEELE---ALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLA 444
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
155-445 |
5.30e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 44.27 E-value: 5.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 155 RQLSQQLNGLvcesatcvNGEGPASSANL--KDLEkQQNQEITDQLEEEKKECHQKQGALRE---------QLQVHIQTI 223
Cdd:PRK10929 82 AELRQQLNNE--------RDEPRSVPPNMstDALE-QEILQVSSQLLEKSRQAQQEQDRAREisdslsqlpQQQTEARRQ 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 224 GILVSEKAELQ----TALAHTQHAARQKEgesedLASRlqysRRRVGELERA-LSAVSTQqkkadrynkELTKerdaLRL 298
Cdd:PRK10929 153 LNEIERRLQTLgtpnTPLAQAQLTALQAE-----SAAL----KALVDELELAqLSANNRQ---------ELAR----LRS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 299 ELYKN--TQSNEDLKQEKSELEEkLRVLVTEKAgmqlnleelqkkLEMTELLLQQFSSRCEAPDA----NQQLQQAMEER 372
Cdd:PRK10929 211 ELAKKrsQQLDAYLQALRNQLNS-QRQREAERA------------LESTELLAEQSGDLPKSIVAqfkiNRELSQALNQQ 277
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1955630608 373 AQ-LEAHLGQVMESVRQLQMERDkyAENLKGESAMWRQRMQQMSE----QVHTLREekecsMSRVQELETSLAELRNQ 445
Cdd:PRK10929 278 AQrMDLIASQQRQAASQTLQVRQ--ALNTLREQSQWLGVSNALGEalraQVARLPE-----MPKPQQLDTEMAQLRVQ 348
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
397-653 |
7.15e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 7.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 397 AENLKGESAMWRQRMQQMSEQVHTLREekecsmsRVQELETSLAELRNQmEPPAGPSEVEQQLQAEAEHLRKELEglagQ 476
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRK-------ELEEAEAALEEFRQK-NGLVDLSEEAKLLLQQLSELESQLA----E 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 477 LQAQVQDNEglSRLNREQeerlleleraaelwgEQAEARRQILETMQNDrTTISRALSQNRELKEQLAELQSgfvKLTNE 556
Cdd:COG3206 231 ARAELAEAE--ARLAALR---------------AQLGSGPDALPELLQS-PVIQQLRAQLAELEAELAELSA---RYTPN 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 557 NMEITSALQSEQHVKRELGKklgELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAA---YQQLTSEKEVLHNQ 633
Cdd:COG3206 290 HPDVIALRAQIAALRAQLQQ---EAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELeaeLRRLEREVEVAREL 366
|
250 260
....*....|....*....|
gi 1955630608 634 LLLQTQLVDQLQQQEAQGKA 653
Cdd:COG3206 367 YESLLQRLEEARLAEALTVG 386
|
|
| COG4026 |
COG4026 |
Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General ... |
267-341 |
7.78e-04 |
|
Uncharacterized conserved protein, contains TOPRIM domain, potential nuclease [General function prediction only];
Pssm-ID: 443204 [Multi-domain] Cd Length: 287 Bit Score: 42.79 E-value: 7.78e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1955630608 267 ELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKK 341
Cdd:COG4026 132 ELREELLELKEKIDEIAKEKEKLTKENEELESELEELREEYKKLREENSILEEEFDNIKSEYSDLKSRFEELLKK 206
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
364-683 |
1.08e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.57 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 364 QLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELR 443
Cdd:pfam07888 35 RLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELS 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 444 NQmeppagpSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEG-LSRLNREQEERLLELeraaelwGEQAEARRQILETM 522
Cdd:pfam07888 115 EE-------KDALLAQRAAHEARIRELEEDIKTLTQRVLERETeLERMKERAKKAGAQR-------KEEEAERKQLQAKL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 523 QNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRE---LGKKLGELQEKLSELKETVELKSQEA 599
Cdd:pfam07888 181 QQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAEneaLLEELRSLQERLNASERKVEGLGEEL 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 600 QSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQ----TQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQ 675
Cdd:pfam07888 261 SSMAAQRDRTQAELHQARLQAAQLTLQLADASLALREGrarwAQERETLQQSAEADKDRIEKLSAELQRLEERLQEERME 340
|
....*...
gi 1955630608 676 NQQLRAQL 683
Cdd:pfam07888 341 REKLEVEL 348
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
228-379 |
1.10e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 228 SEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGELERAL----SAVSTQQKKADRYNKEL-----TKERDALRL 298
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIkrleLEIEEVEARIKKYEEQLgnvrnNKEYEALQK 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 299 ELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQQfssrcEAPDANQQLQQAMEERAQLEAH 378
Cdd:COG1579 97 EIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDE-----ELAELEAELEELEAEREELAAK 171
|
.
gi 1955630608 379 L 379
Cdd:COG1579 172 I 172
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
456-890 |
1.21e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 456 EQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALS- 534
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQl 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 535 -----QNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKRELGKKLGELQEKLSEL----KETVELKSQEAQSLQQQ 605
Cdd:COG4717 128 lplyqELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLslatEEELQDLAEELEELQQR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 606 RDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQtQLVDQLQQQEAQGKAVAEMA-----RQELQETQERLEAATQQNQQL- 679
Cdd:COG4717 208 LAELEEELEEAQEELEELEEELEQLENELEAA-ALEERLKEARLLLLIAAALLallglGGSLLSLILTIAGVLFLVLGLl 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 680 --------RAQLSLMAHPGEGDGLDREEEEDEEEEEEEAVAVPQPMPSIPEDLESREAMVAFFNSAVASAEEEQARLRGQ 751
Cdd:COG4717 287 allflllaREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 752 LKEQRvrcrrLAHLLASAQKEPEaaapapgtggdsvcgethralqgamEKLQSRFMELmQEKADLKERVEELEHRCIQLS 831
Cdd:COG4717 367 ELEQE-----IAALLAEAGVEDE-------------------------EELRAALEQA-EEYQELKEELEELEEQLEELL 415
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1955630608 832 GEtdtigEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLELQELVLRLVGDR 890
Cdd:COG4717 416 GE-----LEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDG 469
|
|
| MutS2 |
COG1193 |
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair]; |
552-693 |
1.45e-03 |
|
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair];
Pssm-ID: 440806 [Multi-domain] Cd Length: 784 Bit Score: 42.44 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 552 KLTNENMEITSALQSEQHVKRELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLghLQQYVAAYQQL-TSEKEVl 630
Cdd:COG1193 508 LLGEESIDVEKLIEELERERRELEEEREEAERLREELEKLREELEEKLEELEEEKEEIL--EKAREEAEEILrEARKEA- 584
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1955630608 631 hnqlllqTQLVDQLQQQEAQGKAVAEmARQELQETQERLEAATQQNQQLRAQLSLMAHPGEGD 693
Cdd:COG1193 585 -------EELIRELREAQAEEEELKE-ARKKLEELKQELEEKLEKPKKKAKPAKPPEELKVGD 639
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
223-443 |
1.46e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 223 IGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGELERALSAVSTQQKKAdrynkELTKERDALRlelyk 302
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIA-----ELEAELERLD----- 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 303 ntQSNEDLKQEKSELEE---KLRVLVTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQameeRAQLEAHL 379
Cdd:COG4913 682 --ASSDDLAALEEQLEEleaELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLEL----RALLEERF 755
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1955630608 380 GQVMESVRQLQMeRDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECsmsRVQELETSLAELR 443
Cdd:COG4913 756 AAALGDAVEREL-RENLEERIDALRARLNRAEEELERAMRAFNREWPA---ETADLDADLESLP 815
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
179-405 |
1.53e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 179 SSANLKDLEKQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRL 258
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 259 QYSRRRVGELERALSAVSTQQ--KKADRYNKELTKERDAlrLELYKNTQsnEDLKQEKSELEEKLRVLVTEKAGMQLNLE 336
Cdd:COG3883 96 YRSGGSVSYLDVLLGSESFSDflDRLSALSKIADADADL--LEELKADK--AELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1955630608 337 ELQKKLEMTELLLQQFSSrceapdanqQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKGESA 405
Cdd:COG3883 172 ELEAQQAEQEALLAQLSA---------EEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAA 231
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
252-604 |
1.57e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.36 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 252 EDLASRLQYSRRRVGELERALSAVSTQQKKADRYNKELTKERDALRLEL--YKNTQS--------NEDLKQEKSELEEKL 321
Cdd:PRK03918 182 EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVkeLEELKEeieelekeLESLEGSKRKLEEKI 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 322 RVLVTEKAGMQLNLEELQKKLEMTElllqqfssrceapdanqQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLK 401
Cdd:PRK03918 262 RELEERIEELKKEIEELEEKVKELK-----------------ELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEIN 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 402 GesamWRQRMQQMSEQVHTLREEKEcsmsRVQELETSLAELrnqmEPPAGPSEVEQQLQAEAEHLRKELEGLA-GQLQAQ 480
Cdd:PRK03918 325 G----IEERIKELEEKEERLEELKK----KLKELEKRLEEL----EERHELYEEAKAKKEELERLKKRLTGLTpEKLEKE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 481 VQD---------------NEGLSRLNREQEERLLELERAAELWGEQAEARRQI-----LETMQNDRTTISRALSQNRELK 540
Cdd:PRK03918 393 LEElekakeeieeeiskiTARIGELKKEIKELKKAIEELKKAKGKCPVCGRELteehrKELLEEYTAELKRIEKELKEIE 472
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1955630608 541 EQLAELQSGFVKLtnenmEITSALQSEQHVKRELGKKLGELQEKLSEL-KETVELKSQEAQSLQQ 604
Cdd:PRK03918 473 EKERKLRKELREL-----EKVLKKESELIKLKELAEQLKELEEKLKKYnLEELEKKAEEYEKLKE 532
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
281-882 |
1.62e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.36 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 281 KADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEapd 360
Cdd:PRK03918 162 NAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKE--- 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 361 anqQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLK--GESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETS 438
Cdd:PRK03918 239 ---EIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEelEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKR 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 439 LAELRNQMEppagpsEVEQQLQ------AEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEERLLELERAAELWGEQA 512
Cdd:PRK03918 316 LSRLEEEIN------GIEERIKeleekeERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 513 EARrqiLETMQNDRTTISRALSqnrELKEQLAELQSGFVKLTNENMEITSA---------LQSEQHVKRELGKKLGELQE 583
Cdd:PRK03918 390 EKE---LEELEKAKEEIEEEIS---KITARIGELKKEIKELKKAIEELKKAkgkcpvcgrELTEEHRKELLEEYTAELKR 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 584 KLSELKETVELKSQEAQSLQQQRdqylghlqqyvaayQQLTSEKEVLHNQlllqtQLVDQLQQQEaqgKAVAEMARQELQ 663
Cdd:PRK03918 464 IEKELKEIEEKERKLRKELRELE--------------KVLKKESELIKLK-----ELAEQLKELE---EKLKKYNLEELE 521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 664 ETQERLEAATQQNQQLRAQLSLMAhpgegDGLDREeeedeeeeeeeavavpqpmpsipEDLESREAMVaffNSAVASAEE 743
Cdd:PRK03918 522 KKAEEYEKLKEKLIKLKGEIKSLK-----KELEKL-----------------------EELKKKLAEL---EKKLDELEE 570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 744 EQARLRGQLKEQRVRC-----RRLAHL---------LASAQKEPEaaapapgtggdsvcgETHRALQGAMEKLQSRFMEL 809
Cdd:PRK03918 571 ELAELLKELEELGFESveeleERLKELepfyneyleLKDAEKELE---------------REEKELKKLEEELDKAFEEL 635
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 810 MQEKADLKE---RVEEL-------EHRciQLSGETDTIGEYIALYQSQRAVLKERHREKEEYISRLAQDKEEMKVKLLEL 879
Cdd:PRK03918 636 AETEKRLEElrkELEELekkyseeEYE--ELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKEL 713
|
...
gi 1955630608 880 QEL 882
Cdd:PRK03918 714 EKL 716
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
178-480 |
2.32e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.05 E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 178 ASSANLKDLEKQQNQEITDQLEEEKKECHQKQGALREQLQVHiqtigilVSEKAELQTALAHTQHAARQKEGESEDLASR 257
Cdd:PTZ00121 1472 ADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKAD-------EAKKAEEAKKADEAKKAEEAKKADEAKKAEE 1544
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 258 LQYSR--RRVGELERALSAVSTQQKK--ADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKagmqL 333
Cdd:PTZ00121 1545 KKKADelKKAEELKKAEEKKKAEEAKkaEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK----I 1620
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 334 NLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQV-------MESVRQLQMERDKYAENLKGESA- 405
Cdd:PTZ00121 1621 KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKaeedkkkAEEAKKAEEDEKKAAEALKKEAEe 1700
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 406 -----MWRQRMQQMSEQVHTLREEKECSMSRVQELETSLAELRNQMEppagPSEVEQQLQAEAEHLRKELEGLAGQLQAQ 480
Cdd:PTZ00121 1701 akkaeELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAE----EAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
360-619 |
2.65e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 360 DANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAenlkgESAMWRQRMQQMSEQ---VHTLREEkecsmsrVQELE 436
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQ-----ERREALQRLAEYSWDeidVASAERE-------IAELE 674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 437 TSLAELRnqmeppAGPSEVEqQLQAEAEHLRKELEGLAGQLQAQVQDNEGL-SRLNREQEERLLELERAAELWGEQAEAR 515
Cdd:COG4913 675 AELERLD------ASSDDLA-ALEEQLEELEAELEELEEELDELKGEIGRLeKELEQAEEELDELQDRLEAAEDLARLEL 747
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 516 RQILETM--QNDRTTISRALSQNreLKEQLAELQSGFVKLTNENMEITSALQSEQH-VKRELG---KKLGELQEKLSELK 589
Cdd:COG4913 748 RALLEERfaAALGDAVERELREN--LEERIDALRARLNRAEEELERAMRAFNREWPaETADLDadlESLPEYLALLDRLE 825
|
250 260 270
....*....|....*....|....*....|..
gi 1955630608 590 ET--VELKSQEAQSLQQQRDQYLGHLQQYVAA 619
Cdd:COG4913 826 EDglPEYEERFKELLNENSIEFVADLLSKLRR 857
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
200-626 |
2.66e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.81 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 200 EEKKECHQKQGALREQLQVHIQTIGilvSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRrrvgeLERALSAVSTQQ 279
Cdd:PLN02939 45 QQKKKRGKNIAPKQRSSNSKLQSNT---DENGQLENTSLRTVMELPQKSTSSDDDHNRASMQR-----DEAIAAIDNEQQ 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 280 KKADRYNKELTKERDALrLELYKNTQSNE-DLKQEKSELEEKLRVLVTEKagmqlnlEELQKKLEMTELLLQQfssrcea 358
Cdd:PLN02939 117 TNSKDGEQLSDFQLEDL-VGMIQNAEKNIlLLNQARLQALEDLEKILTEK-------EALQGKINILEMRLSE------- 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 359 pdANQQLQQAMEERAQLEAhlgqvmesvrqLQMERDKYAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELETS 438
Cdd:PLN02939 182 --TDARIKLAAQEKIHVEI-----------LEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAE 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 439 LAELrnqmeppagpseveqqlqAEAEHLRKELEGLAGQLQAQVQDNEglSRLNREQEERLLELERAAELWGEQAEARRQI 518
Cdd:PLN02939 249 LIEV------------------AETEERVFKLEKERSLLDASLRELE--SKFIVAQEDVSKLSPLQYDCWWEKVENLQDL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 519 LETMQNDRTTISRALSQNRELKEQLAELQSGFvkltnenmeitsalqSEQHVKRELGKKLGELQEKLSELKETVELKSQE 598
Cdd:PLN02939 309 LDRATNQVEKAALVLDQNQDLRDKVDKLEASL---------------KEANVSKFSSYKVELLQQKLKLLEERLQASDHE 373
|
410 420
....*....|....*....|....*...
gi 1955630608 599 AQSlqqqrdqylghlqqYVAAYQQLTSE 626
Cdd:PLN02939 374 IHS--------------YIQLYQESIKE 387
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
213-608 |
2.74e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 213 REQLQVHIQTIGILVSEKAELQTALAHTQHAArqkegesEDLASRLQYSRRRVGELERALSAVS----------TQQKKA 282
Cdd:PRK04863 278 ANERRVHLEEALELRRELYTSRRQLAAEQYRL-------VEMARELAELNEAESDLEQDYQAASdhlnlvqtalRQQEKI 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 283 DRYNKELtkerDALRLELYKNTQSNEDLKQEKSELEEKLRV-------LVTEKAGMQLNLEELQKK-------------- 341
Cdd:PRK04863 351 ERYQADL----EELEERLEEQNEVVEEADEQQEENEARAEAaeeevdeLKSQLADYQQALDVQQTRaiqyqqavqalera 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 342 ---LEMTELLLQQFSSRCEAPDAnqQLQQAMEERAQLEAHLG----------QVMESVRQLQMERDKyaenlkgeSAMW- 407
Cdd:PRK04863 427 kqlCGLPDLTADNAEDWLEEFQA--KEQEATEELLSLEQKLSvaqaahsqfeQAYQLVRKIAGEVSR--------SEAWd 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 408 --RQRMQQMSEQVHTLreekecsmSRVQELETSLAELRNQMeppagpseveqQLQAEAEHLRKELEGlagQLQAQVQDNE 485
Cdd:PRK04863 497 vaRELLRRLREQRHLA--------EQLQQLRMRLSELEQRL-----------RQQQRAERLLAEFCK---RLGKNLDDED 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 486 GLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQ 565
Cdd:PRK04863 555 ELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQ 634
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1955630608 566 seqhvkrelgkklgELQEKLSELKETVELKSQEAQSLQQQRDQ 608
Cdd:PRK04863 635 --------------QLLERERELTVERDELAARKQALDEEIER 663
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
508-896 |
2.77e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 508 WGEQAEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQseqhvKRELGKKLGELQEKLSE 587
Cdd:COG4717 62 QGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE-----KLEKLLQLLPLYQELEA 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 588 LKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQE 667
Cdd:COG4717 137 LEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 668 RLEaatQQNQQLRAQLSLMAHPGEGDGLDREEEEDEEEEEEEA--VAVPQPMPSIPEDLESREAMVAFFNSAVASAEEEQ 745
Cdd:COG4717 217 EAQ---EELEELEEELEQLENELEAAALEERLKEARLLLLIAAalLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 746 ARLRGQLKEQRVRCRRLAHLLASAQKEPEAAAPAPGTGGDSVCGEThRALQGAMEKLQSRFMELMQEKADLKERVEELEH 825
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEEL-LELLDRIEELQELLREAEELEEELQLEELEQEI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 826 RCIQLSGETDTIGEYIALYQ--SQRAVLKERHREKEEYISRLA---------QDKEEMKVKLLELQELVLRLVGDRNEWH 894
Cdd:COG4717 373 AALLAEAGVEDEEELRAALEqaEEYQELKEELEELEEQLEELLgeleelleaLDEEELEEELEELEEELEELEEELEELR 452
|
..
gi 1955630608 895 GR 896
Cdd:COG4717 453 EE 454
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
182-881 |
2.80e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 41.70 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 182 NLKDLEKQQNQEITDQLEEEKKECHQKQGALRE---QLQVHIQTIGILVSEKAELQTALAHTQ-------HAARQKEGES 251
Cdd:pfam01576 8 QAKEEELQKVKERQQKAESELKELEKKHQQLCEeknALQEQLQAETELCAEAEEMRARLAARKqeleeilHELESRLEEE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 252 EDLASRLQYSRRR----VGELERALSA------------VSTQQK---------KADRYNKELTKERDALRLELYKNTqS 306
Cdd:pfam01576 88 EERSQQLQNEKKKmqqhIQDLEEQLDEeeaarqklqlekVTTEAKikkleedilLLEDQNSKLSKERKLLEERISEFT-S 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 307 NEDLKQEKSELEEKLRvlvTEKAGMQLNLEELQKKLEMTELLLQQFSSRCEApDANQQLQQAMEERAQLEAHLGQVMESV 386
Cdd:pfam01576 167 NLAEEEEKAKSLSKLK---NKHEAMISDLEERLKKEEKGRQELEKAKRKLEG-ESTDLQEQIAELQAQIAELRAQLAKKE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 387 RQLQMERDKYAENLKGESAMW---RQRMQQMSEQVHTLREEKECSMSRVQ-------ELETSLAELRNQMEPPAGPSEVE 456
Cdd:pfam01576 243 EELQAALARLEEETAQKNNALkkiRELEAQISELQEDLESERAARNKAEKqrrdlgeELEALKTELEDTLDTTAAQQELR 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 457 QQLQAEAEHLRKELEGLAGQLQAQVQDnegLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDRTTISRALSQN 536
Cdd:pfam01576 323 SKREQEVTELKKALEEETRSHEAQLQE---MRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 537 RELKEQLAElqsgfvKLTNENMEITSALQSEQHVKRELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQY 616
Cdd:pfam01576 400 KQDSEHKRK------KLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDT 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 617 VAAYQQLTSEKevlhnqlllqTQLVDQLQQQEAQGKAVAEMarqeLQETQERLEAATQQNQQLRAQLSLMAHPGEGDGLD 696
Cdd:pfam01576 474 QELLQEETRQK----------LNLSTRLRQLEDERNSLQEQ----LEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGT 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 697 REEEEDEEEEEEEAVAvpqpmpSIPEDLESREAmvaffnsAVASAEEEQARLRGQLKEQRV---RCRRLAHLLASAQKEP 773
Cdd:pfam01576 540 LEALEEGKKRLQRELE------ALTQQLEEKAA-------AYDKLEKTKNRLQQELDDLLVdldHQRQLVSNLEKKQKKF 606
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 774 EAAAPAPGTGGDSVCGETHRALQGAMEKlQSRFMELMQEKADLKERVEELEHRCIQLSGETDtigeyiALYQSQRAVLKE 853
Cdd:pfam01576 607 DQMLAEEKAISARYAEERDRAEAEAREK-ETRALSLARALEEALEAKEELERTNKQLRAEME------DLVSSKDDVGKN 679
|
730 740
....*....|....*....|....*...
gi 1955630608 854 RHrEKEEYISRLAQDKEEMKVKLLELQE 881
Cdd:pfam01576 680 VH-ELERSKRALEQQVEEMKTQLEELED 706
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
181-596 |
2.89e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.59 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 181 ANLKDLEKQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQ-----KEGESEDLA 255
Cdd:PRK03918 372 EELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgRELTEEHRK 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 256 SRLQYSRRRVGELERALSAVSTQQKKADRYNKELTKERDALRlELYKNTQSNEDLKqeksELEEKLRVlvtekagmqLNL 335
Cdd:PRK03918 452 ELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKES-ELIKLKELAEQLK----ELEEKLKK---------YNL 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 336 EELQKKLEMTELLLqqfssrceapdanqqlqqamEERAQLEAHLGQVMESVRQLqmerdkyaENLKGESAMWRQRMQQMS 415
Cdd:PRK03918 518 EELEKKAEEYEKLK--------------------EKLIKLKGEIKSLKKELEKL--------EELKKKLAELEKKLDELE 569
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 416 EQVHTL-REEKECSMSRVQELETSLAELRNQMEPPAGPSEVEQQLQAEAEHLRKELEGLagqlqaqVQDNEGLSRLNREQ 494
Cdd:PRK03918 570 EELAELlKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL-------DKAFEELAETEKRL 642
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 495 EERLLELERAAELWGEqaEARRQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNENMEITSALQSEQHVKREL 574
Cdd:PRK03918 643 EELRKELEELEKKYSE--EEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKAL 720
|
410 420
....*....|....*....|..
gi 1955630608 575 gKKLGELQEKLSELKETVELKS 596
Cdd:PRK03918 721 -ERVEELREKVKKYKALLKERA 741
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
288-693 |
3.24e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 288 ELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVT--EKAGMQLNL----EELQKKLEMTELLLQQFSSRCEApdA 361
Cdd:PRK04863 290 ELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQdyQAASDHLNLvqtaLRQQEKIERYQADLEELEERLEE--Q 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 362 NQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAENLKgesaMWRQRMQQMSEQVHTLREEKECSMSR---VQELETS 438
Cdd:PRK04863 368 NEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALD----VQQTRAIQYQQAVQALERAKQLCGLPdltADNAEDW 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 439 LAELRNQMEPPAGPS-EVEQQLQ-AEAEHLRKE-----LEGLAGQLQAQVQDNEGLSRLNREQEERLLEleraaelwgEQ 511
Cdd:PRK04863 444 LEEFQAKEQEATEELlSLEQKLSvAQAAHSQFEqayqlVRKIAGEVSRSEAWDVARELLRRLREQRHLA---------EQ 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 512 AEARRQILETMQndrttisRALSQNRELKEQLAElqsgFVKLTNENMEITSALQSEQhvkRELGKKLGELQEKLSELKET 591
Cdd:PRK04863 515 LQQLRMRLSELE-------QRLRQQQRAERLLAE----FCKRLGKNLDDEDELEQLQ---EELEARLESLSESVSEARER 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 592 VELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLlQTQLVDQLQQQeaqgkavaeMARQELQETQERLEA 671
Cdd:PRK04863 581 RMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFE-DSQDVTEYMQQ---------LLERERELTVERDEL 650
|
410 420
....*....|....*....|..
gi 1955630608 672 ATQQnQQLRAQLSLMAHPGEGD 693
Cdd:PRK04863 651 AARK-QALDEEIERLSQPGGSE 671
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
198-627 |
3.95e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.03 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 198 LEEEKKECHQKQGALreqLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVGELERalsavst 277
Cdd:pfam07888 32 LQNRLEECLQERAEL---LQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEE------- 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 278 QQKKADRYNKELTKERDALRLElykntqsNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKklemtelllqqfssrcE 357
Cdd:pfam07888 102 KYKELSASSEELSEEKDALLAQ-------RAAHEARIRELEEDIKTLTQRVLERETELERMKE----------------R 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 358 APDANQQLQQAMEERAQLEAHLGQVMESVRQLQMErdkyAENLKGESAMWRQRMQQMSEQVHTLREEKECSMSRVQELET 437
Cdd:pfam07888 159 AKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKE----FQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 438 SLAELRnqmeppaGPSEVEQQLQAEAEHLRKELEGLAGQlQAQVQDNEGLSRLNREQEERLLELERAAELWGEQ--AEAR 515
Cdd:pfam07888 235 LLEELR-------SLQERLNASERKVEGLGEELSSMAAQ-RDRTQAELHQARLQAAQLTLQLADASLALREGRArwAQER 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 516 RQILETMQNDRTTISRALSQNRELKEQLAELQSGFVKLTNEnmeitsaLQSEQHVKRelgKKLGELQEKLSELKETVELK 595
Cdd:pfam07888 307 ETLQQSAEADKDRIEKLSAELQRLEERLQEERMEREKLEVE-------LGREKDCNR---VQLSESRRELQELKASLRVA 376
|
410 420 430
....*....|....*....|....*....|..
gi 1955630608 596 SQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEK 627
Cdd:pfam07888 377 QKEKEQLQAEKQELLEYIRQLEQRLETVADAK 408
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
596-842 |
4.87e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 4.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 596 SQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQLQQQEAQGKAVAEMARQELQETQERLEAATQQ 675
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 676 NQQLRAQLSLMAhpgegdgldREEEEDEEEEEEEAVAVPQPmpsiPEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQ 755
Cdd:COG4942 99 LEAQKEELAELL---------RALYRLGRQPPLALLLSPED----FLDAVRRLQYLKYLAPARREQAEELRADLAELAAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 756 RVRCRRLAHLLASAQKEPEAAapapgtggdsvcgetHRALQGAMEKLQSRFMELMQEKADLKERVEELEHRCIQLSGETD 835
Cdd:COG4942 166 RAELEAERAELEALLAELEEE---------------RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
....*..
gi 1955630608 836 TIGEYIA 842
Cdd:COG4942 231 RLEAEAA 237
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
448-675 |
5.31e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 5.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 448 PPAGPSEVEQQLQAEAEHLRKELEGLAGQL-QAQVQDNEGLSRLNREQEERLLELERAAELWGEQAEARRQILETMQNDR 526
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELaALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 527 TTISRALSQNRELKEQLAELQSgfVKLTNENMEITSALQSEQHVKRE--LGKKLGELQEKLSELKETVELKSQEAQSLQQ 604
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYR--LGRQPPLALLLSPEDFLDAVRRLqyLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1955630608 605 QRDQYLGHLQQYVAAYQQLTSEKEvlhNQLLLQTQLVDQLQQQEAQGKAVAEmARQELQETQERLEAATQQ 675
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKA---ERQKLLARLEKELAELAAELAELQQ-EAEELEALIARLEAEAAA 238
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
576-684 |
5.68e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 39.95 E-value: 5.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 576 KKLGELQEKLSELKETVELKSQEAQSLQQQrdqyLGHLQQYVAAYQQLTSEKEVLHNQLllqTQLVDQLQQQEAQGKAVA 655
Cdd:PRK09039 53 SALDRLNSQIAELADLLSLERQGNQDLQDS----VANLRASLSAAEAERSRLQALLAEL---AGAGAAAEGRAGELAQEL 125
|
90 100
....*....|....*....|....*....
gi 1955630608 656 EMARQELQETQERLEAATQQNQQLRAQLS 684
Cdd:PRK09039 126 DSEKQVSARALAQVELLNQQIAALRRQLA 154
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
337-644 |
5.73e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 40.81 E-value: 5.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 337 ELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEeraqleahlgQVMESVRQLQMERDKYAEnlkgESAMWRQRMQQMSE 416
Cdd:PRK10929 83 ELRQQLNNERDEPRSVPPNMSTDALEQEILQVSS----------QLLEKSRQAQQEQDRARE----ISDSLSQLPQQQTE 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 417 QVHTLREekecSMSRVQEL---ETSLAELRN---QMEPPAGPSEVEQ----QLQA----EAEHLRKEL-EGLAGQLQAQV 481
Cdd:PRK10929 149 ARRQLNE----IERRLQTLgtpNTPLAQAQLtalQAESAALKALVDElelaQLSAnnrqELARLRSELaKKRSQQLDAYL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 482 QDNEglSRLNREQEERLLELERAAELWGEQ-AEARRQILETMQNDRtTISRALSQNRELKEQLAELQSgfvKLTNENMEI 560
Cdd:PRK10929 225 QALR--NQLNSQRQREAERALESTELLAEQsGDLPKSIVAQFKINR-ELSQALNQQAQRMDLIASQQR---QAASQTLQV 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 561 TSALQS--EQH----VKRELGKKLGELQEKLSELKETVELKSQEAQsLQQQRDQY------LGHLQQYVAA-YQQLTSEK 627
Cdd:PRK10929 299 RQALNTlrEQSqwlgVSNALGEALRAQVARLPEMPKPQQLDTEMAQ-LRVQRLRYedllnkQPQLRQIRQAdGQPLTAEQ 377
|
330
....*....|....*...
gi 1955630608 628 E-VLHNQLLLQTQLVDQL 644
Cdd:PRK10929 378 NrILDAQLRTQRELLNSL 395
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
307-490 |
5.77e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.39 E-value: 5.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 307 NEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKlemtellLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESV 386
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEEAEAA-------LEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAEL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 387 RQLQMERDKYAENLKGESAMWRQ-----RMQQMSEQVHTLREEKECSMSR-------VQELETSLAELRNQMEppAGPSE 454
Cdd:COG3206 236 AEAEARLAALRAQLGSGPDALPEllqspVIQQLRAQLAELEAELAELSARytpnhpdVIALRAQIAALRAQLQ--QEAQR 313
|
170 180 190
....*....|....*....|....*....|....*.
gi 1955630608 455 VEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRL 490
Cdd:COG3206 314 ILASLEAELEALQAREASLQAQLAQLEARLAELPEL 349
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
180-848 |
6.28e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.44 E-value: 6.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 180 SANLKDLEKQQNqEITDQLEEEKKEchqkQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASrlq 259
Cdd:TIGR02169 356 TEEYAELKEELE-DLRAELEEVDKE----FAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNA--- 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 260 ysrrrvgELERALSAVstqqkkadrynKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQ 339
Cdd:TIGR02169 428 -------AIAGIEAKI-----------NELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQ 489
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 340 KKLEMTELLLQQFSSRCEAPDANQQLqqameeraqLEAHLGQVMESVRQLQMERDKYA---------------------- 397
Cdd:TIGR02169 490 RELAEAEAQARASEERVRGGRAVEEV---------LKASIQGVHGTVAQLGSVGERYAtaievaagnrlnnvvveddava 560
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 398 ----ENLKGESA-----MWRQRMQQMSEQVHTLREEKECSMS------------------RVQELETSLAELRNQM---- 446
Cdd:TIGR02169 561 keaiELLKRRKAgratfLPLNKMRDERRDLSILSEDGVIGFAvdlvefdpkyepafkyvfGDTLVVEDIEAARRLMgkyr 640
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 447 ---------EP----------PAGPSEVEQQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSRLNREQEErlleleraael 507
Cdd:TIGR02169 641 mvtlegelfEKsgamtggsraPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQ----------- 709
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 508 wgEQAEARRQIlETMQNDRTTISRALSQNRELKEQLAE-LQSGFVKLTNENMEITsalqseqhvkrELGKKLGELQEKLS 586
Cdd:TIGR02169 710 --ELSDASRKI-GEIEKEIEQLEQEEEKLKERLEELEEdLSSLEQEIENVKSELK-----------ELEARIEELEEDLH 775
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 587 ELKETVE-LKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLLQTQLVDQ----LQQQEAQGKAVAEMARQE 661
Cdd:TIGR02169 776 KLEEALNdLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKeiqeLQEQRIDLKEQIKSIEKE 855
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 662 LQETQERLEAATQQNQQLRAQLSLMAHPGEGdgldreeeedeeeeeeeavavpqpmpsIPEDLESREAMVAFFNSAVASA 741
Cdd:TIGR02169 856 IENLNGKKEELEEELEELEAALRDLESRLGD---------------------------LKKERDELEAQLRELERKIEEL 908
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 742 EEEQARLRGQLKEQRVRCRRLAHLLASAQKEPEAAAPAPGTGGD-SVCGETHRALQGAMEKLQSRFMELMQEKADLKERV 820
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSlEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRL 988
|
730 740
....*....|....*....|....*...
gi 1955630608 821 EELEHRCIQLSGETDTIGEYIALYQSQR 848
Cdd:TIGR02169 989 DELKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
275-489 |
7.85e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.00 E-value: 7.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 275 VSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLV--------------TEKAGMQLNLEELQK 340
Cdd:PHA02562 197 IKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVmdiedpsaalnklnTAAAKIKSKIEQFQK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 341 KLEMtelllqqFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVRQLQMERDKYAEnlkgesamwrqRMQQMSEQVHT 420
Cdd:PHA02562 277 VIKM-------YEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEE-----------IMDEFNEQSKK 338
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 421 LREEKecsmSRVQELETSLAELRNQmeppAGPSEVE-QQLQAEAEHLRKELEGLAGQLQAQVQDNEGLSR 489
Cdd:PHA02562 339 LLELK----NKISTNKQSLITLVDK----AKKVKAAiEELQAEFVDNAEELAKLQDELDKIVKTKSELVK 400
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
189-678 |
8.58e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.16 E-value: 8.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 189 QQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKEGESEDLASRLQYSRRRVG-- 266
Cdd:pfam01576 551 QRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEae 630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 267 --ELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEM 344
Cdd:pfam01576 631 arEKETRALSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQA 710
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 345 TElllqqfssrceapDANQQLQQAMeeraqleahlgQVMESvrqlQMERDKYAENLKGEsamwrQRMQQMSEQVHTL--- 421
Cdd:pfam01576 711 TE-------------DAKLRLEVNM-----------QALKA----QFERDLQARDEQGE-----EKRRQLVKQVRELeae 757
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 422 ----REEKECSMSRVQELETSLAELRNQMEPPA-GPSEVEQQL---QAEAEHLRKELEGLAG---QLQAQVQDNEglsrl 490
Cdd:pfam01576 758 ledeRKQRAQAVAAKKKLELDLKELEAQIDAANkGREEAVKQLkklQAQMKDLQRELEEARAsrdEILAQSKESE----- 832
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 491 nreqeerlleleraaelwgEQAEARRQILETMQNDRTTISRALSQNRELKEQLA-ELQSGFVKltnenmeiTSALQSEqh 569
Cdd:pfam01576 833 -------------------KKLKNLEAELLQLQEDLAASERARRQAQQERDELAdEIASGASG--------KSALQDE-- 883
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 570 vKRELGKKLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQlllQTQLVDQLQQQEA 649
Cdd:pfam01576 884 -KRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQ---NKELKAKLQEMEG 959
|
490 500 510
....*....|....*....|....*....|...
gi 1955630608 650 QGKAVAEMARQELQ----ETQERLEAATQQNQQ 678
Cdd:pfam01576 960 TVKSKFKSSIAALEakiaQLEEQLEQESRERQA 992
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
308-683 |
9.02e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 39.94 E-value: 9.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 308 EDLKQEKSELEEKLrvlvtekAGMQLNLEELQKKLEMTELLLQQFSSRCEAPDANQQLQQAMEERAQLEAHLGQVMESVR 387
Cdd:PRK04863 789 EQLRAEREELAERY-------ATLSFDVQKLQRLHQAFSRFIGSHLAVAFEADPEAELRQLNRRRVELERALADHESQEQ 861
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 388 QLQMErdkyAENLKGESAMWRQRMQQMS--------EQVHTLREEkecsMSRVQELETSLAELRNQMeppagpSEVEQQL 459
Cdd:PRK04863 862 QQRSQ----LEQAKEGLSALNRLLPRLNlladetlaDRVEEIREQ----LDEAEEAKRFVQQHGNAL------AQLEPIV 927
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 460 QAeaehLRKELEGLAgQLQAQVQDNEGLSRLNREQEERLLELERAAELWGEQAEARRQILETMQND--RTTISRALSQNR 537
Cdd:PRK04863 928 SV----LQSDPEQFE-QLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLNEklRQRLEQAEQERT 1002
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 538 ELKEQLAELQSGFvkltNENMEITSALQSEQHVKRELgkkLGELQEKLSELkeTVELKSQEAQSLQQQRDQylghlqqyv 617
Cdd:PRK04863 1003 RAREQLRQAQAQL----AQYNQVLASLKSSYDAKRQM---LQELKQELQDL--GVPADSGAEERARARRDE--------- 1064
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1955630608 618 aayqqltsekevLHNQLLLQTQLVDQLQQQEAQGKAvaemarqELQETQERLEAATQQNQQLRAQL 683
Cdd:PRK04863 1065 ------------LHARLSANRSRRNQLEKQLTFCEA-------EMDNLTKKLRKLERDYHEMREQV 1111
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
317-588 |
9.55e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 39.61 E-value: 9.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 317 LEEKLRVLVTEKAGMQLNLEELQKKLEMTELLlqQFSSRCEAPDANQQLQ----QAMEERAQLEAHLGQVMESVRQLQME 392
Cdd:PHA02562 172 NKDKIRELNQQIQTLDMKIDHIQQQIKTYNKN--IEEQRKKNGENIARKQnkydELVEEAKTIKAEIEELTDELLNLVMD 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 393 RDKYAENLKG---ESAMWRQRMQQMSEQVHTLREEKECS--MSRVQELETSLAELRNQMeppagpSEVEQQLQAEAEHlR 467
Cdd:PHA02562 250 IEDPSAALNKlntAAAKIKSKIEQFQKVIKMYEKGGVCPtcTQQISEGPDRITKIKDKL------KELQHSLEKLDTA-I 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1955630608 468 KELEGLAGQLQAQVQdneglsrlnreqeerlleleraaelwgEQAEARRQIletmQNDRTTISRALSQNRELKEQLAELQ 547
Cdd:PHA02562 323 DELEEIMDEFNEQSK---------------------------KLLELKNKI----STNKQSLITLVDKAKKVKAAIEELQ 371
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1955630608 548 SGFVkltNENMEItSALQSEqhvKRELGKKLGELQEKLSEL 588
Cdd:PHA02562 372 AEFV---DNAEEL-AKLQDE---LDKIVKTKSELVKEKYHR 405
|
|
| |
