|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
214-278 |
2.31e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 126.36 E-value: 2.31e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1941690766 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKV 278
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
60-124 |
8.18e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.35 E-value: 8.18e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1941690766 60 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKL 124
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
214-279 |
6.68e-28 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 108.06 E-value: 6.68e-28
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1941690766 214 IGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPKYGLFAPVHKVT 279
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
60-125 |
3.45e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 3.45e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1941690766 60 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLKGIFTRPSKLT 125
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
658-1545 |
4.43e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 98.21 E-value: 4.43e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 658 KEKENSLEAIRSKLDKAEDQhLVEMEDTLNKLQeaeikvkelevLQAKCNEQTKvidnftsQLKAtEEKLLDLDALRKAS 737
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDI-LNELERQLKSLE-----------RQAEKAERYK-------ELKA-ELRELELALLVLRL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 738 SEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEA 817
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 818 SEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEndiaeimkmsgdnssq 897
Cdd:TIGR02168 315 ERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELE---------------- 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 898 ltkmnDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAakkheeekkelerklSDLEKKMETshNQCQ 977
Cdd:TIGR02168 379 -----EQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEI---------------EELLKKLEE--AELK 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 978 ELKARYEratsetktKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEEL 1057
Cdd:TIGR02168 437 ELQAELE--------ELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV 508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1058 RGLKSEKQLLSQEGNdlklengsLLSKLVELEAKI-----ALLQGDQQKLWSVNETLNLEKEKFLEEKQ---------DA 1123
Cdd:TIGR02168 509 KALLKNQSGLSGILG--------VLSELISVDEGYeaaieAALGGRLQAVVVENLNAAKKAIAFLKQNElgrvtflplDS 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1124 EKYYEQEHLNKEALAVEREKLLKEINVVQ-EELLKINVEN--------DSL-----QASKVSMQALIEELQ---LSKDTL 1186
Cdd:TIGR02168 581 IKGTEIQGNDREILKNIEGFLGVAKDLVKfDPKLRKALSYllggvlvvDDLdnaleLAKKLRPGYRIVTLDgdlVRPGGV 660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1187 IAKTEKDQE--------EKDHLEDQIKKLITEnfilAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLS 1258
Cdd:TIGR02168 661 ITGGSAKTNssilerrrEIEELEEKIEELEEK----IAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLA 736
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1259 NLDNTCIALKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLE 1338
Cdd:TIGR02168 737 RLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLN 816
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1339 AANTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELlsenRIITEKLHKCLEEAAHTEMSLNEKITYL 1418
Cdd:TIGR02168 817 EEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEEL----EELIEELESELEALLNERASLEEALALL 892
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1419 TSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAEREnsiKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKE 1498
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEELREKLAQLELRLE---GLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEE 969
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|.
gi 1941690766 1499 LQERKKENQELVASKCDLSLM----LKEAQNTKKNLEKEHTHILQAKESLD 1545
Cdd:TIGR02168 970 ARRRLKRLENKIKELGPVNLAaieeYEELKERYDFLTAQKEDLTEAKETLE 1020
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
977-1874 |
6.41e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 94.35 E-value: 6.41e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 977 QELKARYERA--TSETKTKHEEILQNLQKTLLDTeDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMS 1054
Cdd:TIGR02168 155 EERRAIFEEAagISKYKERRKETERKLERTRENL-DRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLR 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1055 -----EELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQ 1129
Cdd:TIGR02168 234 leelrEELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLAN 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1130 EHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQlskdtliaktEKDQEEKDHLEDqikklit 1209
Cdd:TIGR02168 314 LERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELE----------AELEELESRLEE------- 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1210 enfilakdkddiiqkLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSnldntciALKVERDNVLQNNRNLQletdmll 1289
Cdd:TIGR02168 377 ---------------LEEQLETLRSKVAQLELQIASLNNEIERLEARLE-------RLEDRRERLQQEIEELL------- 427
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1290 qdQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIKARRAVTDSeciqLLHEK 1369
Cdd:TIGR02168 428 --KKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLER----LQENL 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1370 ETLAASERRLLAEKEEL------LSENRIITEKLHKCLEEAahtemsLNEKITYLTSEKEMASQKMTELKKQQD----SL 1439
Cdd:TIGR02168 502 EGFSEGVKALLKNQSGLsgilgvLSELISVDEGYEAAIEAA------LGGRLQAVVVENLNAAKKAIAFLKQNElgrvTF 575
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1440 LKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQEnmkLLGNI---DALKKELQERKKENQ--------- 1507
Cdd:TIGR02168 576 LPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY---LLGGVlvvDDLDNALELAKKLRPgyrivtldg 652
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1508 ELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKEIQEMQQSLILEQ 1587
Cdd:TIGR02168 653 DLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALR 732
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1588 E---ARAKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHI 1664
Cdd:TIGR02168 733 KdlaRLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEL 812
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1665 KTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFIL 1744
Cdd:TIGR02168 813 TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALL 892
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1745 QKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQ 1824
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARR 972
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1825 TNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1874
Cdd:TIGR02168 973 RLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1145-1945 |
2.95e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.96 E-value: 2.95e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1145 LKEINVVQEELLKiNVENDSLQASKVS-MQALIEEL-QLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKD--- 1219
Cdd:TIGR02168 188 LDRLEDILNELER-QLKSLERQAEKAErYKELKAELrELELALLVLRLEELREELEELQEELKEAEEELEELTAELQele 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1220 -------DIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIALKVERDNVLQNNRNLQL-------ET 1285
Cdd:TIGR02168 267 ekleelrLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEelaeleeKL 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1286 DMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIKARRAVTDSECIQL 1365
Cdd:TIGR02168 347 EELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEEL 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1366 LHEKETLAASE-RRLLAEKEELLsenriitEKLHKCLEEAAHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKS 1444
Cdd:TIGR02168 427 LKKLEEAELKElQAELEELEEEL-------EELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQE 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1445 SLETQNGALLAERENSIKAIGDLKRQCDQ----------------ESANrSLVVQENMKLLGNIDALKKELQER------ 1502
Cdd:TIGR02168 500 NLEGFSEGVKALLKNQSGLSGILGVLSELisvdegyeaaieaalgGRLQ-AVVVENLNAAKKAIAFLKQNELGRvtflpl 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1503 -KKENQELVASKCDLSLMLKEAQNTKKNLEKEHThilQAKESLDAQLNTCCSEKNilLRDGLNLQEECHKlskeiqemQQ 1581
Cdd:TIGR02168 579 dSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDP---KLRKALSYLLGGVLVVDD--LDNALELAKKLRP--------GY 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1582 SLILEQEARAKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSekfvllqEKSKSEQELAEIIEEKELLTAEAAQLA 1661
Cdd:TIGR02168 646 RIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEE-------KIAELEKALAELRKELEELEEELEQLR 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1662 AHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQvmqdnqnLLAEKSEMMLEKDELLKEKETLAESY 1741
Cdd:TIGR02168 719 KELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEE-------LEERLEEAEEELAEAEAEIEELEAQI 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1742 FILQKEISQLaktnshiSANLLESQNENRTLRKDKNKLTLKIRELETlQSFTAAQTAEDAMQIMEQMTKEKTETLASLED 1821
Cdd:TIGR02168 792 EQLKEELKAL-------REALDELRAELTLLNEEAANLRERLESLER-RIAATERRLEDLEEQIEELSEDIESLAAEIEE 863
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1822 TKQTNAKLQNELDTLKennlknvEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRD 1901
Cdd:TIGR02168 864 LEELIEELESELEALL-------NERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEV 936
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 1941690766 1902 EVTSHQ-KLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSI 1945
Cdd:TIGR02168 937 RIDNLQeRLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKI 981
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
574-1398 |
6.64e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.80 E-value: 6.64e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 574 IALWKSKLETAIASHQQAMEELKVSFSKgLGTETAEFAELKTQIEKMRLdYQHEIENLQNQQDSERAAHAKEMEALRAKL 653
Cdd:TIGR02168 227 LALLVLRLEELREELEELQEELKEAEEE-LEELTAELQELEEKLEELRL-EVSELEEEIEELQKELYALANEISRLEQQK 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 654 MkVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA- 732
Cdd:TIGR02168 305 Q-ILRERLANLERQLEELEAQLEELESKLDELAEELAELE---EKLEELKEELESLEAELEELEAELEELESRLEELEEq 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 733 ---LRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQgrELKLTNLQENLSEVSQVKETLEKELQI 809
Cdd:TIGR02168 381 letLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE--EAELKELQAELEELEEELEELQEELER 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 810 LKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREE------QLIKAKEKLEND 883
Cdd:TIGR02168 459 LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGilgvlsELISVDEGYEAA 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 884 IAEIMkmsGDNSSQLTKMNDELRLKERDVeelqLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKEL-ERKL 962
Cdd:TIGR02168 539 IEAAL---GGRLQAVVVENLNAAKKAIAF----LKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDlVKFD 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 963 SDLEKKME---------TSHNQCQELKARYE--------------------RATSETKT----------KHEEILQNLQK 1003
Cdd:TIGR02168 612 PKLRKALSyllggvlvvDDLDNALELAKKLRpgyrivtldgdlvrpggvitGGSAKTNSsilerrreieELEEKIEELEE 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1004 TLLDTEDKLKGAREENSGLLQELEELRKQAD----KAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENG 1079
Cdd:TIGR02168 692 KIAELEKALAELRKELEELEEELEQLRKELEelsrQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLE 771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1080 SLLSKLVELEAKIALLQGDQqklwsvnETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQEELLKIN 1159
Cdd:TIGR02168 772 EAEEELAEAEAEIEELEAQI-------EQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLE 844
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1160 VENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKklitenfilakdkddiiqKLQRSYEELVKDQKAL 1239
Cdd:TIGR02168 845 EQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALA------------------LLRSELEELSEELREL 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1240 VQETEDLTAEKKSALEKLSNLDNTCIALKVERDNVLQNNRnlqletdmllqdqEKLNASLQAALQVKQLLRSEASGLRAQ 1319
Cdd:TIGR02168 907 ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS-------------EEYSLTLEEAEALENKIEDDEEEARRR 973
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1941690766 1320 LDDASKALrkAELETVQLEAANTsltklLEEIKARRavtdsecIQLLHEKETLAASERRLLAEKEELlseNRIITEKLH 1398
Cdd:TIGR02168 974 LKRLENKI--KELGPVNLAAIEE-----YEELKERY-------DFLTAQKEDLTEAKETLEEAIEEI---DREARERFK 1035
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1323-2012 |
1.57e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 86.65 E-value: 1.57e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1323 ASKALR----KAELETVQLEAANTSLTKLLEEIKARRAVTDseciqllhEKETLAASERRLLAEKEELLSENRIITEKLH 1398
Cdd:TIGR02168 209 AEKAERykelKAELRELELALLVLRLEELREELEELQEELK--------EAEEELEELTAELQELEEKLEELRLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1399 KCLEEAAHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESA-- 1476
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAel 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1477 NRSLVVQENMKLLgnIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTccSEKN 1556
Cdd:TIGR02168 361 EELEAELEELESR--LEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE--AELK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1557 ILLRDGLNLQEECHKLSKEIQEMQQSLILEQEARAKESE---SSLYENNQLHGRMVLLEQEVEELRvciEELQSEKFVLL 1633
Cdd:TIGR02168 437 ELQAELEELEEELEELQEELERLEEALEELREELEEAEQaldAAERELAQLQARLDSLERLQENLE---GFSEGVKALLK 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1634 QEKSKSE--QELAEIIE-EKELLTAEAAQLAAHIKTL--------KSDFAALSKSKA---------------------EL 1681
Cdd:TIGR02168 514 NQSGLSGilGVLSELISvDEGYEAAIEAALGGRLQAVvvenlnaaKKAIAFLKQNELgrvtflpldsikgteiqgndrEI 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1682 QELHSCLTKILDDLqrnheVTLAEKAQ-----------VMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEisq 1750
Cdd:TIGR02168 594 LKNIEGFLGVAKDL-----VKFDPKLRkalsyllggvlVVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGS--- 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1751 lAKTNShisaNLLESQNENRTLRKDKNKLTLKIRELET-----LQSFTAAQTA-EDAMQIMEQMTKEKTETLASLEDTKQ 1824
Cdd:TIGR02168 666 -AKTNS----SILERRREIEELEEKIEELEEKIAELEKalaelRKELEELEEElEQLRKELEELSRQISALRKDLARLEA 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1825 TNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVt 1904
Cdd:TIGR02168 741 EVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEA- 819
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1905 shQKLEEERSVLNNQLLEMKKReskfIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLhsvVQ 1984
Cdd:TIGR02168 820 --ANLRERLESLERRIAATERR----LEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEA---LA 890
|
730 740
....*....|....*....|....*...
gi 1941690766 1985 TLESDKVKLELKVKNLELQLKENKRQLS 2012
Cdd:TIGR02168 891 LLRSELEELSEELRELESKRSELRRELE 918
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
608-1447 |
1.11e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 83.58 E-value: 1.11e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 608 AEFAELKTQIEKMRLDYQHEIENLQNQQDsERAaHAKEMEALRAKLMKV-IKEKENSLEAIRSKLDKAEDQhLVEMEDTL 686
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRR-ERE-KAERYQALLKEKREYeGYELLKEKEALERQKEAIERQ-LASLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 687 NKLQ-EAEIKVKELEVLQAKCNEQTKVIDNFTS-QLKATEEKLLDLDALRkASSEGKSEMKKlrQQLEAAEKQIKHLEIE 764
Cdd:TIGR02169 254 EKLTeEISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEI-ASLERSIAEKE--RELEDAEERLAKLEAE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 765 KNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLH-------Q 837
Cdd:TIGR02169 331 IDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINelkreldR 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 838 KEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQL 917
Cdd:TIGR02169 411 LQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 918 KLTkanenasflqksiedmtvKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETShNQCQELKARYERATsetktkhEEI 997
Cdd:TIGR02169 491 ELA------------------EAEAQARASEERVRGGRAVEEVLKASIQGVHGTV-AQLGSVGERYATAI-------EVA 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 998 LQN-LQKTLLDTEDKLKGA----REENSGLLQELeELRKQADKAKSLTYLLTSAKKEIEL-------------------- 1052
Cdd:TIGR02169 545 AGNrLNNVVVEDDAVAKEAiellKRRKAGRATFL-PLNKMRDERRDLSILSEDGVIGFAVdlvefdpkyepafkyvfgdt 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1053 ----MSEELRGLKSEKQLLSQEGNDLK---------LENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEK---EKF 1116
Cdd:TIGR02169 624 lvveDIEAARRLMGKYRMVTLEGELFEksgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELrriENR 703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1117 LEEKQDAEKYYEQEHlnkEALAVEREKLLKEINVVQEELLKINVENDSLQASkvsmqalIEELQLSKDTLIAKTEKDQEE 1196
Cdd:TIGR02169 704 LDELSQELSDASRKI---GEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQE-------IENVKSELKELEARIEELEED 773
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1197 KDHLEDQIKKLITEnfiLAKDKDDIIQKLQRSYEELVKDQKALVQETE----DLTAEKKSALEKLSNLDNTCIALKVERD 1272
Cdd:TIGR02169 774 LHKLEEALNDLEAR---LSHSRIPEIQAELSKLEEEVSRIEARLREIEqklnRLTLEKEYLEKEIQELQEQRIDLKEQIK 850
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1273 NVLQNNRNLQLETDMLLQDQEKLNASLQAalqvkqlLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIK 1352
Cdd:TIGR02169 851 SIEKEIENLNGKKEELEEELEELEAALRD-------LESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELK 923
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1353 ARRAVTDSEciqllheketLAASERRLLAEKEEllSENRIITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMASQKMTEL 1432
Cdd:TIGR02169 924 AKLEALEEE----------LSEIEDPKGEDEEI--PEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDEL 991
|
890
....*....|....*
gi 1941690766 1433 KKQQDSLLKEKSSLE 1447
Cdd:TIGR02169 992 KEKRAKLEEERKAIL 1006
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
657-1263 |
1.34e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 83.45 E-value: 1.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 657 IKEKENSLEAIRSKLDKAEDqHLVEMEDTLNKLQ-------------------EAEIKVKELEVLQAKCNEQTKVIDNFT 717
Cdd:COG1196 174 KEEAERKLEATEENLERLED-ILGELERQLEPLErqaekaeryrelkeelkelEAELLLLKLRELEAELEELEAELEELE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 718 SQLKATEEKL-----------LDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKL 786
Cdd:COG1196 253 AELEELEAELaeleaeleelrLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 787 TNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREK 866
Cdd:COG1196 333 EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 867 DEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQE 946
Cdd:COG1196 413 LERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 947 AAKKHEEEKKELERKLSDLEKKMETSHNQ-CQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGARE----ENSG 1021
Cdd:COG1196 493 LLLLLEAEADYEGFLEGVKAALLLAGLRGlAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEylkaAKAG 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1022 LLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQ-----LLSQEGNDLKLENGSLLSKLVELEAKIALLQ 1096
Cdd:COG1196 573 RATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYvlgdtLLGRTLVAARLEAALRRAVTLAGRLREVTLE 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1097 GDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALI 1176
Cdd:COG1196 653 GEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEA 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1177 EELQLSkdtliaktEKDQEEKDHLEDQIKKLITENFILAKDKDDiIQKLQRS--------------YEELVKDQKALVQE 1242
Cdd:COG1196 733 EREELL--------EELLEEEELLEEEALEELPEPPDLEELERE-LERLEREiealgpvnllaieeYEELEERYDFLSEQ 803
|
650 660
....*....|....*....|.
gi 1941690766 1243 TEDLTAEKKSALEKLSNLDNT 1263
Cdd:COG1196 804 REDLEEARETLEEAIEEIDRE 824
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
405-1207 |
1.41e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.18 E-value: 1.41e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 405 ELEAKMDQLRTMVEAADREKvELLNQLEEEKRKVEDLQFRVEEESITKgdLEVATVSEKSRIMELEKDLALRVQEVAELR 484
Cdd:TIGR02168 197 ELERQLKSLERQAEKAERYK-ELKAELRELELALLVLRLEELREELEE--LQEELKEAEEELEELTAELQELEEKLEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 485 -RRLESNKPAGDVDMSL-SLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEkLSKENESLKSK 562
Cdd:TIGR02168 274 lEVSELEEEIEELQKELyALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAE-LEEKLEELKEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 563 LEHANKENSDVIALWKSkLETAIASHQQAMEELK---VSFSKGLGTETAEFAELKTQIEkmrlDYQHEIENL-QNQQDSE 638
Cdd:TIGR02168 353 LESLEAELEELEAELEE-LESRLEELEEQLETLRskvAQLELQIASLNNEIERLEARLE----RLEDRRERLqQEIEELL 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 639 RAAHAKEMEALRAKLMKVIKEKEN------SLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKcneqtkv 712
Cdd:TIGR02168 428 KKLEEAELKELQAELEELEEELEElqeeleRLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN------- 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 713 IDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAA-EKQIKHLEIEKNAESSKA-SSITRELQGR----ELKL 786
Cdd:TIGR02168 501 LEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAAlGGRLQAVVVENLNAAKKAiAFLKQNELGRvtflPLDS 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 787 TNLQENLSEVSQVKETLEKELQILKE--KFAEASEEAVS-------VQRSMQETVNKLHQKEEQFNMLSSDLEKLR---- 853
Cdd:TIGR02168 581 IKGTEIQGNDREILKNIEGFLGVAKDlvKFDPKLRKALSyllggvlVVDDLDNALELAKKLRPGYRIVTLDGDLVRpggv 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 854 ------ENLADMEAKFREKDEREEQLikakEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENAS 927
Cdd:TIGR02168 661 itggsaKTNSSILERRREIEELEEKI----EELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLA 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 928 FLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQcQELKARYERATSETKT------KHEEILQNL 1001
Cdd:TIGR02168 737 RLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEI-EELEAQIEQLKEELKAlrealdELRAELTLL 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1002 QKTLLDTEDKLKGAREENSGLLQELEELRKQADKAK----SLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLE 1077
Cdd:TIGR02168 816 NEEAANLRERLESLERRIAATERRLEDLEEQIEELSedieSLAAEIEELEELIEELESELEALLNERASLEEALALLRSE 895
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1078 NGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKF-LEEKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQEELL 1156
Cdd:TIGR02168 896 LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLeVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLK 975
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|...
gi 1941690766 1157 KINVENDSLQAskVSMQAL--IEELQLSKDTLIAKTEKDQEEKDHLEDQIKKL 1207
Cdd:TIGR02168 976 RLENKIKELGP--VNLAAIeeYEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
783-1649 |
2.37e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.80 E-value: 2.37e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 783 ELKLTNLQENLSEVSQVKETLEKELQILK------EKFAEASEEAVSVQRSMQetVNKLHQKEEQFNMLSSDLEKLRENL 856
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSLErqaekaERYKELKAELRELELALL--VLRLEELREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 857 ADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANEN-ASFLQKSIED 935
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQlEELESKLDEL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 936 MTVKAEQSQQEAAKKHEEEKKELERKLsdLEKKMETSHNQCQELKARYERATSETKTKHEEI------LQNLQKTLLDTE 1009
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAELEE--LEAELEELESRLEELEEQLETLRSKVAQLELQIaslnneIERLEARLERLE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1010 DKLKGAREENSGLLQELEELRKQADKAKsltylLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELE 1089
Cdd:TIGR02168 414 DRRERLQQEIEELLKKLEEAELKELQAE-----LEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQ 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1090 AKIALLQGDQQKLWSVNETLNlekekflEEKQDAEKYYEQEHLNKEALAVErEKLLKEINVVQEELLKiNVENDSLQASK 1169
Cdd:TIGR02168 489 ARLDSLERLQENLEGFSEGVK-------ALLKNQSGLSGILGVLSELISVD-EGYEAAIEAALGGRLQ-AVVVENLNAAK 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1170 VSMQALiEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSYEELVkdqkALVQETEDLTae 1249
Cdd:TIGR02168 560 KAIAFL-KQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLL----GGVLVVDDLD-- 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1250 kkSALEKLSNLDNTciALKVERDNVLQNNRNLQL--ETDMLLQDQEKLNASLQAALQVKQLLRSEASgLRAQLDDASKAL 1327
Cdd:TIGR02168 633 --NALELAKKLRPG--YRIVTLDGDLVRPGGVITggSAKTNSSILERRREIEELEEKIEELEEKIAE-LEKALAELRKEL 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1328 RKAELETVQLEAANTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAht 1407
Cdd:TIGR02168 708 EELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE-- 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1408 emSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMK 1487
Cdd:TIGR02168 786 --ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE 863
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1488 LLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTccseknillrdglnLQE 1567
Cdd:TIGR02168 864 LEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQ--------------LEL 929
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1568 ECHKLSKEIQEMQQSL----ILEQEARAKESESSLYENNQLHGRMVLLEQEVEEL-RV---CIEELQSEK----FVLLQE 1635
Cdd:TIGR02168 930 RLEGLEVRIDNLQERLseeySLTLEEAEALENKIEDDEEEARRRLKRLENKIKELgPVnlaAIEEYEELKerydFLTAQK 1009
|
890
....*....|....*.
gi 1941690766 1636 K--SKSEQELAEIIEE 1649
Cdd:TIGR02168 1010 EdlTEAKETLEEAIEE 1025
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1048-1872 |
2.63e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 82.42 E-value: 2.63e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1048 KEIELMSEELRglkSEKQLLSQEGNDlKLENGSLLSKLVELEAKIALLQgdqqklwsvNETLNLEKEKFLEEKQDAEKYY 1127
Cdd:TIGR02169 187 ERLDLIIDEKR---QQLERLRREREK-AERYQALLKEKREYEGYELLKE---------KEALERQKEAIERQLASLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1128 EQ-----EHLNKEAlaVEREKLLKEIN-----VVQEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEK 1197
Cdd:TIGR02169 254 EKlteeiSELEKRL--EEIEQLLEELNkkikdLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEI 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1198 DHLEDQIKKLITENFILAKDKDdiiqKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIALKVERDNVLQN 1277
Cdd:TIGR02169 332 DKLLAEIEELEREIEEERKRRD----KLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1278 NRNLQLETDMLLQDQEKLNAS----------LQAALQVKQL----LRSEASGLRAQLDDASKALRKAELETVQLEAANTS 1343
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAiagieakineLEEEKEDKALeikkQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1344 LTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSenriITEKLHKCLEEAA---------HTEMSLNEK 1414
Cdd:TIGR02169 488 LQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGS----VGERYATAIEVAAgnrlnnvvvEDDAVAKEA 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1415 ITYLtseKEMASQKMTEL---KKQQDSLLKEKSSLETQNGALLaerensikaigDLKRqCDQESAN------RSLVVQEN 1485
Cdd:TIGR02169 564 IELL---KRRKAGRATFLplnKMRDERRDLSILSEDGVIGFAV-----------DLVE-FDPKYEPafkyvfGDTLVVED 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1486 M----KLLGNID--ALKKELQERKkenqelvASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILL 1559
Cdd:TIGR02169 629 IeaarRLMGKYRmvTLEGELFEKS-------GAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIE 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1560 RDGLNLQEECHKLSKEIQEMQ--QSLILEQEARAKEsesslyennqlhgrmvlleqEVEELRVCIEELQSEKFVLLQEKS 1637
Cdd:TIGR02169 702 NRLDELSQELSDASRKIGEIEkeIEQLEQEEEKLKE--------------------RLEELEEDLSSLEQEIENVKSELK 761
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1638 KSEQELAEIIEEKELLTAEAAQLAAHIktLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLL 1717
Cdd:TIGR02169 762 ELEARIEELEEDLHKLEEALNDLEARL--SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQ 839
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1718 AE-------KSEMMLEKDELLKEKETLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQ 1790
Cdd:TIGR02169 840 EQridlkeqIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRL 919
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1791 SFTAAQTAEDAMQIME-----QMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEE----------LNKSKELLT 1855
Cdd:TIGR02169 920 SELKAKLEALEEELSEiedpkGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEyeevlkrldeLKEKRAKLE 999
|
890
....*....|....*..
gi 1941690766 1856 VENQKMEEFRKEIETLK 1872
Cdd:TIGR02169 1000 EERKAILERIEEYEKKK 1016
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
353-1029 |
8.12e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.87 E-value: 8.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 353 LQEALKEKQQHIEQLLAERDLERAEVAKATshvgEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLE 432
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELE----AELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLE 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 433 EEKRKVEDLQFRVEEESITKGDLEVATVSEksRIMELEKDLALRVQEVAELRRRLESnkpagdvdmslsLLQEISSLQEK 512
Cdd:TIGR02168 411 RLEDRRERLQQEIEELLKKLEEAELKELQA--ELEELEEELEELQEELERLEEALEE------------LREELEEAEQA 476
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 513 LEVTRTDHQR---EITSLKEHFGaREETHQKEIKALYTATEKLSKENESLKSKLEHANKensdvialWKSKLETAIASHQ 589
Cdd:TIGR02168 477 LDAAERELAQlqaRLDSLERLQE-NLEGFSEGVKALLKNQSGLSGILGVLSELISVDEG--------YEAAIEAALGGRL 547
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 590 QAME-------ELKVSFSKGLGTETAEFAELK----TQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKL--MKV 656
Cdd:TIGR02168 548 QAVVvenlnaaKKAIAFLKQNELGRVTFLPLDsikgTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLggVLV 627
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 657 IKEKENSLEaIRSKLDKAE-----DQHLV--------EMEDTLNKLQEAEIKVKELEvlqakcneqtKVIDNFTSQLKAT 723
Cdd:TIGR02168 628 VDDLDNALE-LAKKLRPGYrivtlDGDLVrpggvitgGSAKTNSSILERRREIEELE----------EKIEELEEKIAEL 696
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 724 EEKLldlDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEknaesskASSITRELQGRELKLTNLQENLSEVSQVKETL 803
Cdd:TIGR02168 697 EKAL---AELRKELEELEEELEQLRKELEELSRQISALRKD-------LARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 804 EKELQILKEKFAEASEEAVSVQRSMQetvnklhQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 883
Cdd:TIGR02168 767 EERLEEAEEELAEAEAEIEELEAQIE-------QLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERR 839
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 884 IAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKanenASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLS 963
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLAAEIEELEELIEELESELEA----LLNERASLEEALALLRSELEELSEELRELESKRSELRR 915
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1941690766 964 DLE---KKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEEL 1029
Cdd:TIGR02168 916 ELEelrEKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1026-1667 |
2.88e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 78.83 E-value: 2.88e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1026 LEELRKQADKAksltylltsakkeielmsEELRGLKSEKQLLSQEgndlklengSLLSKLVELEAKIALLQGDQQKLwsv 1105
Cdd:COG1196 202 LEPLERQAEKA------------------ERYRELKEELKELEAE---------LLLLKLRELEAELEELEAELEEL--- 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1106 netlNLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLSKDT 1185
Cdd:COG1196 252 ----EAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1186 LIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNtci 1265
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE--- 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1266 aLKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLT 1345
Cdd:COG1196 405 -LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELL 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1346 KLLEEIKARRAVtdsecIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMA 1425
Cdd:COG1196 484 EELAEAAARLLL-----LLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEV 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1426 SQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGD--LKRQCDQESANRSLVVQENMKLLGNIDALKKE--LQE 1501
Cdd:COG1196 559 AAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAavDLVASDLREADARYYVLGDTLLGRTLVAARLEaaLRR 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1502 RKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKEIQEMQQ 1581
Cdd:COG1196 639 AVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLE 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1582 SLILEQEARAKESESSLYENNQLHGRMVLLEQEVEELRVC---IEELQSEKFVLLQEKSK-------SEQELAEIIEEKE 1651
Cdd:COG1196 719 EELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEppdLEELERELERLEREIEAlgpvnllAIEEYEELEERYD 798
|
650
....*....|....*.
gi 1941690766 1652 LLTAEAAQLAAHIKTL 1667
Cdd:COG1196 799 FLSEQREDLEEARETL 814
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-936 |
9.51e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.28 E-value: 9.51e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 352 ALQEALKEKQqhIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:COG1196 217 ELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELEELE----AELAELEAELEELRLELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 432 EEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAgdVDMSLSLLQEISSLQE 511
Cdd:COG1196 291 YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEE--LEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 512 KLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQA 591
Cdd:COG1196 369 EAEAELAEAEEELEELAE----ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEAL 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 592 MEELKvsfskglgtETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEmEALRAKLMKVIKEKENSLEAIRSKL 671
Cdd:COG1196 445 EEAAE---------EEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEA-AARLLLLLEAEADYEGFLEGVKAAL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 672 DKAEDQHL---VEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLR 748
Cdd:COG1196 515 LLAGLRGLagaVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 749 QQLEAAEKQIKHLEIEKNAESSKASSITRE-------LQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEA 821
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGrtlvaarLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAAL 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 822 VSVQRSMQETVNKLHQKEEQfnmLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKM 901
Cdd:COG1196 675 LEAEAELEELAERLAEEELE---LEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751
|
570 580 590
....*....|....*....|....*....|....*
gi 1941690766 902 NDELRLKERDVEELQLKLTKanenasfLQKSIEDM 936
Cdd:COG1196 752 ALEELPEPPDLEELERELER-------LEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
606-1210 |
1.26e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.90 E-value: 1.26e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 606 ETAE-FAELKTQIEKMRLDYQ-HEIENLQNQQDSERAAhAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEME 683
Cdd:COG1196 210 EKAErYRELKEELKELEAELLlLKLRELEAELEELEAE-LEELEAELEELEAELAELEAELEELRLELEELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 684 DTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA----LRKASSEGKSEMKKLRQQLEAAEKQIK 759
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEeleeLEEELEEAEEELEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 760 HLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKE 839
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 840 EQFNMLSSDLEKLRENLADMEAKFREK----DEREEQLIKAKEKLENDIAEIMKMSGDNSS-QLTKMNDELRLKERDVEE 914
Cdd:COG1196 449 EEEAELEEEEEALLELLAELLEEAALLeaalAELLEELAEAAARLLLLLEAEADYEGFLEGvKAALLLAGLRGLAGAVAV 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 915 LQLKLTK--ANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKT 992
Cdd:COG1196 529 LIGVEAAyeAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDL 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 993 KHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQAdkAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGN 1072
Cdd:COG1196 609 READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREV--TLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1073 DLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQ 1152
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELE 766
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1153 EELLKINVENDSLQAskVSMQALIE--ELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITE 1210
Cdd:COG1196 767 RELERLEREIEALGP--VNLLAIEEyeELEERYDFLSEQREDLEEARETLEEAIEEIDRE 824
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1372-2032 |
2.32e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.25 E-value: 2.32e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1372 LAASERRLLAEKEELLSENRIITEKLHKCLEEAAHTEMsLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNG 1451
Cdd:TIGR02168 227 LALLVLRLEELREELEELQEELKEAEEELEELTAELQE-LEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQ 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1452 ALLAERENSikaigdlkrQCDQESANRSLVVQENMKllgniDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLE 1531
Cdd:TIGR02168 306 ILRERLANL---------ERQLEELEAQLEELESKL-----DELAEELAELEEKLEELKEELESLEAELEELEAELEELE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1532 kehthilQAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKEIQEMQQSL-ILEQEARAKESESSLYENNQLHGRMVL 1610
Cdd:TIGR02168 372 -------SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRReRLQQEIEELLKKLEEAELKELQAELEE 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1611 LEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTK 1690
Cdd:TIGR02168 445 LEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGV 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1691 ILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKEtLAESYFILQKEISQLAKTNSHisANLLESQNENR 1770
Cdd:TIGR02168 525 LSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNE-LGRVTFLPLDSIKGTEIQGND--REILKNIEGFL 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1771 TLRKDKNKLTLKIRELET--LQSFTAAQTAEDAMQIMEQMTKEktETLASLEDTKQTNAKLQNELDTLKENNLknveeLN 1848
Cdd:TIGR02168 602 GVAKDLVKFDPKLRKALSylLGGVLVVDDLDNALELAKKLRPG--YRIVTLDGDLVRPGGVITGGSAKTNSSI-----LE 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1849 KSKELltvenqkmEEFRKEIETLKQAAAQKSQQL-------SALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLL 1921
Cdd:TIGR02168 675 RRREI--------EELEEKIEELEEKIAELEKALaelrkelEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLE 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1922 EMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAK----SLHSVVQTLESDKVKLELKV 1997
Cdd:TIGR02168 747 ERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALRealdELRAELTLLNEEAANLRERL 826
|
650 660 670
....*....|....*....|....*....|....*
gi 1941690766 1998 KNLELQLKENKRQLSSSSGNTDTQADEDERAQESQ 2032
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEELSEDIESLAAEI 861
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
811-1651 |
4.44e-13 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 75.01 E-value: 4.44e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 811 KEKFAEASEEAVSVQRSMQ---ETVNKLHQKEEQFNMLSSDLEKLRENLADMEAkfREKDEREEQLIKAKEKLENDIAEI 887
Cdd:pfam02463 151 KPERRLEIEEEAAGSRLKRkkkEALKKLIEETENLAELIIDLEELKLQELKLKE--QAKKALEYYQLKEKLELEEEYLLY 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 888 MKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTvKAEQSQQEAAKKHEEEKKELERKLSDLEK 967
Cdd:pfam02463 229 LDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEE-KEKKLQEEELKLLAKEEEELKSELLKLER 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 968 KMETSHNQCQELKARYERATSETKTKHEEI--LQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTS 1045
Cdd:pfam02463 308 RKVDDEEKLKESEKEKKKAEKELKKEKEEIeeLEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLS 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1046 AKKEI-----ELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEK--FLE 1118
Cdd:pfam02463 388 SAAKLkeeelELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKdeLEL 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1119 EKQDAEKYYEQEHLNKEALAVERE-KLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEK----- 1192
Cdd:pfam02463 468 KKSEDLLKETQLVKLQEQLELLLSrQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKvaist 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1193 ----DQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIALK 1268
Cdd:pfam02463 548 avivEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEG 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1269 VERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLL 1348
Cdd:pfam02463 628 ILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQR 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1349 EEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAhTEMSLNEKITYLTSEKEMASQK 1428
Cdd:pfam02463 708 EKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEE-EKSELSLKEKELAEEREKTEKL 786
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1429 MTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKENQE 1508
Cdd:pfam02463 787 KVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKE 866
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1509 LVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKEIqEMQQSLILEQE 1588
Cdd:pfam02463 867 ELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYE-EEPEELLLEEA 945
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1941690766 1589 ARAKESESSLYENNQlhgRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKE 1651
Cdd:pfam02463 946 DEKEKEENNKEEEEE---RNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKK 1005
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
344-1025 |
5.55e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 75.18 E-value: 5.55e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 344 ARKISGTTALQEALK-EKQQHIEQLLAERDLERAEVAKATSHVGEIEQelalARDGHDQHVLELEAKMDQLRTMVEAADR 422
Cdd:PTZ00121 1169 ARKAEDAKKAEAARKaEEVRKAEELRKAEDARKAEAARKAEEERKAEE----ARKAEDAKKAEAVKKAEEAKKDAEEAKK 1244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 423 EKVELLNqleEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMElEKDLALRVQEVAELRRRLESNKPAGDVDMSLSL 502
Cdd:PTZ00121 1245 AEEERNN---EEIRKFEEARMAHFARRQAAIKAEEARKADELKKAE-EKKKADEAKKAEEKKKADEAKKKAEEAKKADEA 1320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 503 LQEISSLQEKLEVTRTDHQrEITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKlE 582
Cdd:PTZ00121 1321 KKKAEEAKKKADAAKKKAE-EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAK-K 1398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 583 TAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKEN 662
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKK 1478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 663 SLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEvlqaKCNEQTKvidnfTSQLKATEEKLlDLDALRKASSEGKS 742
Cdd:PTZ00121 1479 AEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAK----KAEEAKK-----ADEAKKAEEAK-KADEAKKAEEKKKA 1548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 743 EMKKLRQQLEAAEkQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQilKEKFAEASEEAV 822
Cdd:PTZ00121 1549 DELKKAEELKKAE-EKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAK--KAEEAKIKAEEL 1625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 823 SVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENL---ADMEAKFREKDEREEQLIKAKEKLENDIAEimkmsgdnssQLT 899
Cdd:PTZ00121 1626 KKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENkikAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE----------ALK 1695
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 900 KMNDElrlkERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELErklsDLEKKMETSHNQCQEL 979
Cdd:PTZ00121 1696 KEAEE----AKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKK----DEEEKKKIAHLKKEEE 1767
|
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 1941690766 980 KARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAReENSGLLQE 1025
Cdd:PTZ00121 1768 KKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIF-DNFANIIE 1812
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
680-1629 |
7.74e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.33 E-value: 7.74e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 680 VEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKvidnftsQLKATEEKLLDLDALRKasSEGKSEMKKLRQQLEAAEKQIK 759
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLE-------RLRREREKAERYQALLK--EKREYEGYELLKEKEALERQKE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 760 HLEieknaesSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQilkekfAEASEEAVSVQRSMQEtvnklhqke 839
Cdd:TIGR02169 241 AIE-------RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK------DLGEEEQLRVKEKIGE--------- 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 840 eqfnmLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdnssqltkmndelrlkERDVEELQLKL 919
Cdd:TIGR02169 299 -----LEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEEL---------------------EREIEEERKRR 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 920 TKANENASFLQKSIEDMTVKAEQsqqeaakkHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEilq 999
Cdd:TIGR02169 353 DKLTEEYAELKEELEDLRAELEE--------VDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEE--- 421
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1000 nlqktLLDTEDKLKGAREENSGLLQELEELRkqaDKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLEng 1079
Cdd:TIGR02169 422 -----LADLNAAIAGIEAKINELEEEKEDKA---LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRE-- 491
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1080 sllskLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKllkeiNVVqeellkin 1159
Cdd:TIGR02169 492 -----LAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAAGNRLN-----NVV-------- 553
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1160 VENDSLQASKVsmqALIEELQLSKDTLIAKTEKDQEEKDhledqIKKLITENFI-LAKDKDDIIQKLQRSYEELVKDQkA 1238
Cdd:TIGR02169 554 VEDDAVAKEAI---ELLKRRKAGRATFLPLNKMRDERRD-----LSILSEDGVIgFAVDLVEFDPKYEPAFKYVFGDT-L 624
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1239 LVQETEdlTAEKKSALEKLSNLDNTCIALK-------VERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLLRS 1311
Cdd:TIGR02169 625 VVEDIE--AARRLMGKYRMVTLEGELFEKSgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEN 702
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1312 EASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIKARRAVTDSECIQLLHEKETLAAS----ERRLLAEKEEL- 1386
Cdd:TIGR02169 703 RLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARieelEEDLHKLEEALn 782
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1387 -------LSENRIITEKLHKCLEEAAHTEMSLNE---KITYLTSEKEMASQKMTELKKQQDSLLKEKSSLEtqngallAE 1456
Cdd:TIGR02169 783 dlearlsHSRIPEIQAELSKLEEEVSRIEARLREieqKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIE-------KE 855
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1457 RENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTH 1536
Cdd:TIGR02169 856 IENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSE 935
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1537 ILQAKESLDAQlntccSEKNILLRDglnLQEECHKLSKEIQEMQQSLILEQEarakESESSLYENNQLHGRMVLLEQEVE 1616
Cdd:TIGR02169 936 IEDPKGEDEEI-----PEEELSLED---VQAELQRVEEEIRALEPVNMLAIQ----EYEEVLKRLDELKEKRAKLEEERK 1003
|
970
....*....|...
gi 1941690766 1617 ELRVCIEELQSEK 1629
Cdd:TIGR02169 1004 AILERIEEYEKKK 1016
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1211-2012 |
9.16e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.95 E-value: 9.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1211 NFILAKDKDDIIQKLQRSYEELVKDqkalVQETEDLTAEKKSALEKLS----NLDNTCIALKVERDNV--LQNNRNLQLE 1284
Cdd:TIGR02169 137 NVVLQGDVTDFISMSPVERRKIIDE----IAGVAEFDRKKEKALEELEeveeNIERLDLIIDEKRQQLerLRREREKAER 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1285 TDMLLQDQEKLNASLQaaLQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIKAR-RAVTDSECI 1363
Cdd:TIGR02169 213 YQALLKEKREYEGYEL--LKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKiKDLGEEEQL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1364 QLLHEKETLAASERRLLAEKEELLSEnriiteklhkcLEEAAHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEK 1443
Cdd:TIGR02169 291 RVKEKIGELEAEIASLERSIAEKERE-----------LEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEY 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1444 SSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKENQELVASKCDLSLMLKEA 1523
Cdd:TIGR02169 360 AELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINEL 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1524 QNTKKNLEKEHTHILQAKESLDAQLNTCCSEKnillrdgLNLQEECHKLSKEIQEMQQSLI-LEQEARAKESESSLYENN 1602
Cdd:TIGR02169 440 EEEKEDKALEIKKQEWKLEQLAADLSKYEQEL-------YDLKEEYDRVEKELSKLQRELAeAEAQARASEERVRGGRAV 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1603 QLhgrmvLLEQEVEELRVCIEELQS--EKFVLLQEKSKSEQeLAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAE 1680
Cdd:TIGR02169 513 EE-----VLKASIQGVHGTVAQLGSvgERYATAIEVAAGNR-LNNVVVEDDAVAKEAIELLKRRKAGRATFLPLNKMRDE 586
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1681 LQELHSCLTK----ILDDLQRNHEVTLAEKAQVMQDN---QNLLAEKSEM----MLEKDELLKEKETLAESYFILQKEIS 1749
Cdd:TIGR02169 587 RRDLSILSEDgvigFAVDLVEFDPKYEPAFKYVFGDTlvvEDIEAARRLMgkyrMVTLEGELFEKSGAMTGGSRAPRGGI 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1750 QLAKTNShisANLLESQNENRTLRKDKNKLTLKIRELEtlqsftaaqtaedamqimeqmtKEKTETLASLEDTKQTNAKL 1829
Cdd:TIGR02169 667 LFSRSEP---AELQRLRERLEGLKRELSSLQSELRRIE----------------------NRLDELSQELSDASRKIGEI 721
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1830 QNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSR-DEVTSH-Q 1907
Cdd:TIGR02169 722 EKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAElS 801
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1908 KLEEERSVLNNQLLEMKKRESK-----------------FIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLR 1970
Cdd:TIGR02169 802 KLEEEVSRIEARLREIEQKLNRltlekeylekeiqelqeQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLE 881
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 1941690766 1971 GEnasAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLS 2012
Cdd:TIGR02169 882 SR---LGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLS 920
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
417-1253 |
9.80e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 73.95 E-value: 9.80e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 417 VEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQE-VAELRRRLESNKPAgd 495
Cdd:TIGR02169 232 KEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEkIGELEAEIASLERS-- 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 496 VDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKENsdviA 575
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELER----EIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF----A 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 576 LWKSKLetaiASHQQAMEELKVSFSKgLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQdserAAHAKEMEALRAKlmk 655
Cdd:TIGR02169 382 ETRDEL----KDYREKLEKLKREINE-LKRELDRLQEELQRLSEELADLNAAIAGIEAKI----NELEEEKEDKALE--- 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 656 vIKEKENSLEAIRSKLDKAEDQHlvemEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLldldalrk 735
Cdd:TIGR02169 450 -IKKQEWKLEQLAADLSKYEQEL----YDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVL-------- 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 736 aSSEGKSEMKKLRQQLEAAEKQIKHLEI-----------EKNAESSKASSITRELQGRE---LKLTNLQENLSEVSQVKE 801
Cdd:TIGR02169 517 -KASIQGVHGTVAQLGSVGERYATAIEVaagnrlnnvvvEDDAVAKEAIELLKRRKAGRatfLPLNKMRDERRDLSILSE 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 802 TLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEE---QFNMLSSDLEkLRENLADMEAKFREKDEREEQLIKAKE 878
Cdd:TIGR02169 596 DGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAARRlmgKYRMVTLEGE-LFEKSGAMTGGSRAPRGGILFSRSEPA 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 879 KLENDIAEIMKMSGDNSSqltkMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEkkel 958
Cdd:TIGR02169 675 ELQRLRERLEGLKRELSS----LQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDL---- 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 959 erklSDLEKKMETSHNQCQELKARYERatsetktkHEEILQNLQKTLLDTEDKLKGAR-EENSGLLQELEELRKQADKA- 1036
Cdd:TIGR02169 747 ----SSLEQEIENVKSELKELEARIEE--------LEEDLHKLEEALNDLEARLSHSRiPEIQAELSKLEEEVSRIEARl 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1037 -------KSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGdqqklwsvnetl 1109
Cdd:TIGR02169 815 reieqklNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLES------------ 882
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1110 nlEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELqLSKDTLIAK 1189
Cdd:TIGR02169 883 --RLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE-LSLEDVQAE 959
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1941690766 1190 TEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRsyeeLVKDQKALVQETEDLTAEKKSA 1253
Cdd:TIGR02169 960 LQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAK----LEEERKAILERIEEYEKKKREV 1019
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
413-1289 |
1.80e-12 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 73.08 E-value: 1.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 413 LRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESitkgdlevatVSEKSRIMELEKDLALRVQEVAELRRRLESNKP 492
Cdd:pfam02463 176 KKLIEETENLAELIIDLEELKLQELKLKEQAKKALEY----------YQLKEKLELEEEYLLYLDYLKLNEERIDLLQEL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 493 AGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSd 572
Cdd:pfam02463 246 LRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKK- 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 573 vialwksKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAK 652
Cdd:pfam02463 325 -------KAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEEL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 653 LMKVIKEKENSLEAIRSK----LDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLL 728
Cdd:pfam02463 398 ELKSEEEKEAQLLLELARqledLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKET 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 729 DLDALRKAssegKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQ 808
Cdd:pfam02463 478 QLVKLQEQ----LELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 809 ILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKdEREEQLIKAKEKLENDIAEIM 888
Cdd:pfam02463 554 SATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKA-TLEADEDDKRAKVVEGILKDT 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 889 KMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANE-------NASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERK 961
Cdd:pfam02463 633 ELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLseltkelLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEEL 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 962 LSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTY 1041
Cdd:pfam02463 713 KKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEK 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1042 LLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQ 1121
Cdd:pfam02463 793 EEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQEL 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1122 DAEKYYEQEHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLS-----KDTLIAKTEKDQEE 1196
Cdd:pfam02463 873 LLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYeeepeELLLEEADEKEKEE 952
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1197 KDHLEDQIKKLITENFILAKDKDDIIQKLQrsYEELVKDQKALVQETEDLTAEKKSALEKLsnLDNTCIALKVERDNVLQ 1276
Cdd:pfam02463 953 NNKEEEEERNKRLLLAKEELGKVNLMAIEE--FEEKEERYNKDELEKERLEEEKKKLIRAI--IEETCQRLKEFLELFVS 1028
|
890
....*....|...
gi 1941690766 1277 NNRNLQLETDMLL 1289
Cdd:pfam02463 1029 INKGWNKVFFYLE 1041
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
965-1716 |
6.80e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 71.30 E-value: 6.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 965 LEKKMETSHNQCQELKARYeratSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLqeleELRKQADKAKSltyllt 1044
Cdd:pfam15921 76 IERVLEEYSHQVKDLQRRL----NESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMA----DIRRRESQSQE------ 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1045 SAKKEIELMSEELRGLKSEKQLLSQEGNdlklengsllSKLVELEAKIALLQGDQQKLWSVNETLnlekekfleEKQDAE 1124
Cdd:pfam15921 142 DLRNQLQNTVHELEAAKCLKEDMLEDSN----------TQIEQLRKMMLSHEGVLQEIRSILVDF---------EEASGK 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1125 KYYEQEHLNK---EALAVEREKLLKEINV-----------VQEELLKINVENDS-----LQASKVSMQALIEELQLSKDT 1185
Cdd:pfam15921 203 KIYEHDSMSTmhfRSLGSAISKILRELDTeisylkgrifpVEDQLEALKSESQNkiellLQQHQDRIEQLISEHEVEITG 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1186 LIAKTEKDQEEKDHLEDQIKkLITENfilAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCI 1265
Cdd:pfam15921 283 LTEKASSARSQANSIQSQLE-IIQEQ---ARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSEL 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1266 A-LKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSL 1344
Cdd:pfam15921 359 TeARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAM 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1345 TKLLEEIKARRAVT-----------DSECIQLLHEKETLAASERRLLAEKEELLSENRIITEkLHKCLEEAAHTEMSLNE 1413
Cdd:pfam15921 439 KSECQGQMERQMAAiqgkneslekvSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSD-LTASLQEKERAIEATNA 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1414 KITYLTSEKEMASQKMTELKKQQDSLlkekSSLETQNGALLAERENSIKAIGDLKRQCDqesaNRSLVVQENMKLLGNID 1493
Cdd:pfam15921 518 EITKLRSRVDLKLQELQHLKNEGDHL----RNVQTECEALKLQMAEKDKVIEILRQQIE----NMTQLVGQHGRTAGAMQ 589
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1494 A----LKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQA-----------KESLDAQLN---TCCSEK 1555
Cdd:pfam15921 590 VekaqLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAgserlravkdiKQERDQLLNevkTSRNEL 669
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1556 NILLRDGLNLQEECHKLSKEIQEMQQSLILEQEARAKESESSLYENNQLHGR-------MVLLEQEVEELRVCIEELQS- 1627
Cdd:pfam15921 670 NSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSdghamkvAMGMQKQITAKRGQIDALQSk 749
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1628 -------------EKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKS--KAELQelhscLTKIL 1692
Cdd:pfam15921 750 iqfleeamtnankEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVAldKASLQ-----FAECQ 824
|
810 820
....*....|....*....|....
gi 1941690766 1693 DDLQRNHEVTLAEKAQVMQDNQNL 1716
Cdd:pfam15921 825 DIIQRQEQESVRLKLQHTLDVKEL 848
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
212-272 |
7.60e-12 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 70.87 E-value: 7.60e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1941690766 212 LKIGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLF 272
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
978-1753 |
1.14e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.48 E-value: 1.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 978 ELKARYERATSETKT--KHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLltSAKKEIELMSE 1055
Cdd:TIGR02169 167 EFDRKKEKALEELEEveENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKE--ALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1056 ELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQ--------KLWSVNETLNLEKEKFLEEKQDAEKYY 1127
Cdd:TIGR02169 245 QLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlrvkekigELEAEIASLERSIAEKERELEDAEERL 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1128 EQEHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKL 1207
Cdd:TIGR02169 325 AKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINEL 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1208 ITENFILAKDKDDIIQKLQRSYEEL---VKDQKALVQETEDLTAEKKSALEKLSNldntciaLKVERDNVLQNNRNLQLE 1284
Cdd:TIGR02169 405 KRELDRLQEELQRLSEELADLNAAIagiEAKINELEEEKEDKALEIKKQEWKLEQ-------LAADLSKYEQELYDLKEE 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1285 TDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRK-----AELETVQLE---AANTSLTKLLEEIKARRA 1356
Cdd:TIGR02169 478 YDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGvhgtvAQLGSVGERyatAIEVAAGNRLNNVVVEDD 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1357 VTDSECIQLLHEKE---------TLAASERRL---------------------------------------LAEKEELLS 1388
Cdd:TIGR02169 558 AVAKEAIELLKRRKagratflplNKMRDERRDlsilsedgvigfavdlvefdpkyepafkyvfgdtlvvedIEAARRLMG 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1389 ENRIIT---EKLHK--CLEEAAHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKA 1463
Cdd:TIGR02169 638 KYRMVTlegELFEKsgAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1464 IGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKENQELVASKCDLSLML-------------------KEAQ 1524
Cdd:TIGR02169 718 IGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLhkleealndlearlshsriPEIQ 797
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1525 NTKKNLEKEHTHILQAKESLDAQLNTCCSEKNIL---LRDGLNLQEECHKLSKEIQEMQQSLILEQEARAKESESSLYEN 1601
Cdd:TIGR02169 798 AELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLekeIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAAL 877
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1602 NQLHGRMVLLEQEVEELRVCIEELQSEKfvllqekskseQELAEIIEEKELLtaeAAQLAAHIKTLKSDFAALSKSKAEL 1681
Cdd:TIGR02169 878 RDLESRLGDLKKERDELEAQLRELERKI-----------EELEAQIEKKRKR---LSELKAKLEALEEELSEIEDPKGED 943
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1941690766 1682 QELHSClTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLAK 1753
Cdd:TIGR02169 944 EEIPEE-ELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEK 1014
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1585-1897 |
4.66e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.42 E-value: 4.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1585 LEQEARAKESESSLYENNQLHGRMVLLEQEveelrvcIEELQSEKFVLlqeksksEQELAEIIEEKELLTAEAAQLAAHI 1664
Cdd:COG1196 218 LKEELKELEAELLLLKLRELEAELEELEAE-------LEELEAELEEL-------EAELAELEAELEELRLELEELELEL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1665 KTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFIL 1744
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEA 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1745 QKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELEtlqsftaaQTAEDAMQIMEQMTKEKTETLASLEDTKQ 1824
Cdd:COG1196 364 EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELE--------EAEEALLERLERLEEELEELEEALAELEE 435
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1941690766 1825 TNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELG 1897
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1087-1961 |
4.69e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 68.46 E-value: 4.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1087 ELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEhlnKEALAVEREKLLKEINVVQEELLKINVENDSLQ 1166
Cdd:pfam02463 174 ALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKE---KLELEEEYLLYLDYLKLNEERIDLLQELLRDEQ 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1167 ASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSYEELVKDQKALVQETEDL 1246
Cdd:pfam02463 251 EEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKEL 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1247 TAEKKSALEKLsnldntcIALKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKA 1326
Cdd:pfam02463 331 KKEKEEIEELE-------KELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1327 LRKAELETvQLEAANTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAH 1406
Cdd:pfam02463 404 EKEAQLLL-ELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKL 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1407 TEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRqCDQESANRSLVVQENM 1486
Cdd:pfam02463 483 QEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAI-STAVIVEVSATADEVE 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1487 KLLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQ 1566
Cdd:pfam02463 562 ERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESA 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1567 EECHKLSKEIQEMQQSLILEQEARAKESEsSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEI 1646
Cdd:pfam02463 642 KAKESGLRKGVSLEEGLAEKSEVKASLSE-LTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAE 720
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1647 IEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQelHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLE 1726
Cdd:pfam02463 721 ELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSR--LKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKA 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1727 KDELLKEKETLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAmQIME 1806
Cdd:pfam02463 799 QEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELL-LKEE 877
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1807 QMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQ 1886
Cdd:pfam02463 878 ELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEE 957
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1941690766 1887 EENVKLAEElgrsrdevtshQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEK 1961
Cdd:pfam02463 958 EEERNKRLL-----------LAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKE 1021
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
742-1256 |
4.88e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 68.12 E-value: 4.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 742 SEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENlsevSQVKETLEKELQILKEKFAEASEEA 821
Cdd:TIGR04523 159 NKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKK----IQKNKSLESQISELKKQNNQLKDNI 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 822 VSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLadmEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTK- 900
Cdd:TIGR04523 235 EKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQL---SEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKe 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 901 MNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQ---QEAAKKHEEEKKELERKLSDLEKKMETSHN--- 974
Cdd:TIGR04523 312 LKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSEsenSEKQRELEEKQNEIEKLKKENQSYKQEIKNles 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 975 QCQELKARYERATSETKTKHEEIlQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQAD----KAKSLTYLLTSAKKEI 1050
Cdd:TIGR04523 392 QINDLESKIQNQEKLNQQKDEQI-KKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSvkelIIKNLDNTRESLETQL 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1051 ELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKyyeqe 1130
Cdd:TIGR04523 471 KVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLED----- 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1131 HLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITE 1210
Cdd:TIGR04523 546 ELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKE 625
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 1941690766 1211 NfilaKDKDDIIQKLQRSYEELVKDQKaLVQETEDLTAEKKSALEK 1256
Cdd:TIGR04523 626 N----EKLSSIIKNIKSKKNKLKQEVK-QIKETIKEIRNKWPEIIK 666
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
514-1255 |
5.90e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 68.24 E-value: 5.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 514 EVTRTDHQREITSLKEHFGAREETHQKEIKALytatEKLSKENESLKsKLEHANKENSDVIALWKSKLETAIASHQQAME 593
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKA----EEARKAEEAKK-KAEDARKAEEARKAEDARKAEEARKAEDAKRV 1154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 594 ELKVSFSKGLGTETAEFAELKTQIEKMRldyqhEIENLQNQQDSERAAHAKEMEALRAKlmkvikEKENSLEAIRSKLDK 673
Cdd:PTZ00121 1155 EIARKAEDARKAEEARKAEDAKKAEAAR-----KAEEVRKAEELRKAEDARKAEAARKA------EEERKAEEARKAEDA 1223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 674 AEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEA 753
Cdd:PTZ00121 1224 KKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKK 1303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 754 AEKQIKHLEIEKNAESSKASSITRELQGRELKL-TNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETV 832
Cdd:PTZ00121 1304 ADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKkAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAA 1383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 833 NKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKE--- 909
Cdd:PTZ00121 1384 KKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEeak 1463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 910 ------RDVEELQLKLTKANEnASFLQKSIEDMTVKAEQSQQEAAKKH-EEEKKELERKLSDLEKKMETSHNQCQELKAR 982
Cdd:PTZ00121 1464 kkaeeaKKADEAKKKAEEAKK-ADEAKKKAEEAKKKADEAKKAAEAKKkADEAKKAEEAKKADEAKKAEEAKKADEAKKA 1542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 983 YERATSETKTKHEEILQNLQKTLLDTEDKlkgAREENSGLLQELEELRkQADKAKsLTYLLTSAKKEIELMSEELRGLKS 1062
Cdd:PTZ00121 1543 EEKKKADELKKAEELKKAEEKKKAEEAKK---AEEDKNMALRKAEEAK-KAEEAR-IEEVMKLYEEEKKMKAEEAKKAEE 1617
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1063 EKQLLSQ--EGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVE 1140
Cdd:PTZ00121 1618 AKIKAEElkKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKE 1697
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1141 REKLLKeinvvqEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDD 1220
Cdd:PTZ00121 1698 AEEAKK------AEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAE 1771
|
730 740 750
....*....|....*....|....*....|....*..
gi 1941690766 1221 IIQKLQRSY--EELVKDQKALVQETEDLTAEKKSALE 1255
Cdd:PTZ00121 1772 EIRKEKEAVieEELDEEDEKRRMEVDKKIKDIFDNFA 1808
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
463-1063 |
8.13e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.40 E-value: 8.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 463 KSRIMELEKDLALRVQEVAELRRRLEsnKPAGDVDMSLSLLQEISSLQEKLEvtrtDHQREITSLKEHFGAREEthqkEI 542
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISSELP--ELREELEKLEKEVKELEELKEEIE----ELEKELESLEGSKRKLEE----KI 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 543 KALYTATEKLSKENESLKSKLEHANKensdvialwkskletaiashqqaMEELKVSFSKgLGTETAEFAELKTQIEKMRL 622
Cdd:PRK03918 262 RELEERIEELKKEIEELEEKVKELKE-----------------------LKEKAEEYIK-LSEFYEEYLDELREIEKRLS 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 623 DYQHEIENLQnqqdseraahakemealraKLMKVIKEKENSLEAIRSKLDKAEDQhLVEMEDTLNKLQEAEIKVKELEVL 702
Cdd:PRK03918 318 RLEEEINGIE-------------------ERIKELEEKEERLEELKKKLKELEKR-LEELEERHELYEEAKAKKEELERL 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 703 QAKCNEQTKvidnftsqlkatEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKhlEIEKNAESSKASSITRELQGR 782
Cdd:PRK03918 378 KKRLTGLTP------------EKLEKELEELEKAKEEIEEEISKITARIGELKKEIK--ELKKAIEELKKAKGKCPVCGR 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 783 ELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQ--RSMQETVNKLHQKEEQFNMLSSDLEKLreNLADME 860
Cdd:PRK03918 444 ELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEkvLKKESELIKLKELAEQLKELEEKLKKY--NLEELE 521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 861 AKFREKDEREEQLIKAK-------------EKLENDIAEIMKMSGDNSSQLTKMNDELR-LKERDVEELQLKLtkaNENA 926
Cdd:PRK03918 522 KKAEEYEKLKEKLIKLKgeikslkkeleklEELKKKLAELEKKLDELEEELAELLKELEeLGFESVEELEERL---KELE 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 927 SFLQKSIEDMTVKAE-QSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTL 1005
Cdd:PRK03918 599 PFYNEYLELKDAEKElEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGL 678
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 1941690766 1006 LDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSE 1063
Cdd:PRK03918 679 RAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKAL 736
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1138-1966 |
8.46e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 67.79 E-value: 8.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1138 AVEREKLLKEINVVQEELLKINVENDSLQASKVSmqalIEELQLSKDTLIAKTEKDQEEKDHLEdqikklitENFILAKD 1217
Cdd:TIGR02169 152 PVERRKIIDEIAGVAEFDRKKEKALEELEEVEEN----IERLDLIIDEKRQQLERLRREREKAE--------RYQALLKE 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1218 KDDIIQK-LQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIALKVERDNVlqNNRNLQLETDMLLQDQEKLn 1296
Cdd:TIGR02169 220 KREYEGYeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEEL--NKKIKDLGEEEQLRVKEKI- 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1297 ASLQAalQVKQLLRSEASGLRaQLDDASKALRKAELETVQLEAANTSLTKLLEEIKARRAvtdseciQLLHEKETLAASE 1376
Cdd:TIGR02169 297 GELEA--EIASLERSIAEKER-ELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRD-------KLTEEYAELKEEL 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1377 RRLLAEKEELLSENRIITEKL---HKCLEEAAHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETqngal 1453
Cdd:TIGR02169 367 EDLRAELEEVDKEFAETRDELkdyREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEE----- 441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1454 laERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKE 1533
Cdd:TIGR02169 442 --EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKAS 519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1534 HTHIL-------QAKESLDAQLNTCCSE--KNILLRDGLnLQEECHKLSKEIQEMQQSLILEQEARAKESESS-LYENNQ 1603
Cdd:TIGR02169 520 IQGVHgtvaqlgSVGERYATAIEVAAGNrlNNVVVEDDA-VAKEAIELLKRRKAGRATFLPLNKMRDERRDLSiLSEDGV 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1604 LHGRMVLLEQE----------------VEELRVCIEELQSEKFVLLQ----EKSKS----EQELAEIIEEKELLTAEAAQ 1659
Cdd:TIGR02169 599 IGFAVDLVEFDpkyepafkyvfgdtlvVEDIEAARRLMGKYRMVTLEgelfEKSGAmtggSRAPRGGILFSRSEPAELQR 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1660 LAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKETLAE 1739
Cdd:TIGR02169 679 LRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKS 758
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1740 SYFILQKEISQLAKTNSHISANLLESqnENRTLRKDKNKLTLKIRELETLQSFTAAQTAEdamqiMEQMTKEKTETLASL 1819
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDL--EARLSHSRIPEIQAELSKLEEEVSRIEARLRE-----IEQKLNRLTLEKEYL 831
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1820 EDTKQTNAKLQNELDTLKENNLKNVEELNKskelltvenqKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRS 1899
Cdd:TIGR02169 832 EKEIQELQEQRIDLKEQIKSIEKEIENLNG----------KKEELEEELEELEAALRDLESRLGDLKKERDELEAQLREL 901
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1900 RDEVtshQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEV 1966
Cdd:TIGR02169 902 ERKI---EELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEE 965
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
336-887 |
9.73e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.27 E-value: 9.73e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 336 LTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlardghdqhvlELEAKMDQLRT 415
Cdd:COG1196 283 LEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELE-----------ELEEELEEAEE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 416 MVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQEVAELRRRLESNkpAGD 495
Cdd:COG1196 352 ELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL--EEA 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 496 VDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIA 575
Cdd:COG1196 430 LAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 576 LWKSKLETAIASHQQAM-EELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQ---------DSERAAHAKE 645
Cdd:COG1196 510 VKAALLLAGLRGLAGAVaVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKagratflplDKIRARAALA 589
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 646 MEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEE 725
Cdd:COG1196 590 AALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRE 669
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 726 KLLDLDALRKASSEGKSEMKKLRQQLEAAEKQikhlEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEK 805
Cdd:COG1196 670 LLAALLEAEAELEELAERLAEEELELEEALLA----EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEE 745
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 806 ELQILKEKFAEASEEAVSVQrsmQETVNKLHQKEEQF---NMLSsdLEKLREnladMEAKFREKDEREEQLIKAKEKLEN 882
Cdd:COG1196 746 ELLEEEALEELPEPPDLEEL---ERELERLEREIEALgpvNLLA--IEEYEE----LEERYDFLSEQREDLEEARETLEE 816
|
....*
gi 1941690766 883 DIAEI 887
Cdd:COG1196 817 AIEEI 821
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
60-121 |
1.21e-10 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 66.63 E-value: 1.21e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1941690766 60 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRP 121
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
336-887 |
2.31e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.11 E-value: 2.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 336 LTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGH---DQHVLELEAKMDQ 412
Cdd:COG1196 248 LEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRrelEERLEELEEELAE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 413 LRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQEVAELRRRLEsnkp 492
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE---- 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 493 agdvdmslSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALyTATEKLSKENESLKSKLEHANKENSD 572
Cdd:COG1196 404 --------ELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA-EEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 573 VIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKtqiEKMRLDYQHEIENLQNQQDSERAAHAkemeALRAK 652
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLL---AGLRGLAGAVAVLIGVEAAYEAALEA----ALAAA 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 653 LMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA 732
Cdd:COG1196 548 LQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 733 LRKASSEGKSEMKKLRQQLEAAEKQikhLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKE 812
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLE---GEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEE 704
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1941690766 813 KFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEI 887
Cdd:COG1196 705 EERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
405-882 |
3.26e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 65.47 E-value: 3.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 405 ELEAKMDQLRTMVEAADREKVEL---LNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKdlalRVQEVA 481
Cdd:PRK03918 211 EISSELPELREELEKLEKEVKELeelKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEE----KVKELK 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 482 ELRRR-LESNKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQK--EIKALYTATEKLSKENES 558
Cdd:PRK03918 287 ELKEKaEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKlkELEKRLEELEERHELYEE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 559 LKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSK---GLGTETAEFAELKTQIEKM-----------RLDY 624
Cdd:PRK03918 367 AKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKitaRIGELKKEIKELKKAIEELkkakgkcpvcgRELT 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 625 QHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENsLEAIRSKLDKAEDQH-----LVEMEDTLNK--LQEAEIKVK 697
Cdd:PRK03918 447 EEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRE-LEKVLKKESELIKLKelaeqLKELEEKLKKynLEELEKKAE 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 698 ELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQL--------EAAEKQIKHLE------I 763
Cdd:PRK03918 526 EYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELeelgfesvEELEERLKELEpfyneyL 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 764 EKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILK-----EKFAEASEEAVSVQRSMQETVNKLHQK 838
Cdd:PRK03918 606 ELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEEL 685
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 1941690766 839 EEQFNMLSSDLEKLRENLADMEakfrEKDEREEQLIKAKEKLEN 882
Cdd:PRK03918 686 EKRREEIKKTLEKLKEELEERE----KAKKELEKLEKALERVEE 725
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
352-945 |
4.58e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 65.06 E-value: 4.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELalardghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR--------EELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 432 EEEKRKVEDLQFRVEE--ESITKGDLEVATVSEksRIMELEKDLalrvqevAELRRRLESNKPAgdvdmslslLQEISSL 509
Cdd:PRK02224 282 RDLRERLEELEEERDDllAEAGLDDADAEAVEA--RREELEDRD-------EELRDRLEECRVA---------AQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 510 QEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIAlwksKLETAiASHQ 589
Cdd:PRK02224 344 AESLREDADDLEERAEELRE----EAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPV----DLGNA-EDFL 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 590 QAMEELKVSFSKGLGTETAEFAELKTQIEKMR--LDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAI 667
Cdd:PRK02224 415 EELREERDELREREAELEATLRTARERVEEAEalLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEV 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 668 RSKLDKAEDqhLVEMEDTLNKLQEAEIKVKELevlqakcneqtkvidnFTSQLKATEEKLLDLDALRKASSEGKSEMKKL 747
Cdd:PRK02224 495 EERLERAED--LVEAEDRIERLEERREDLEEL----------------IAERRETIEEKRERAEELRERAAELEAEAEEK 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 748 RQQLEAAEKQIKHLEIEKNAESSKASSITRELQGrelkLTNLQENLSEVSQVKETLEkELQILKEKFAEASEEAVSVQRS 827
Cdd:PRK02224 557 REAAAEAEEEAEEAREEVAELNSKLAELKERIES----LERIRTLLAAIADAEDEIE-RLREKREALAELNDERRERLAE 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 828 MQETVNKLHQK--EEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdnssqltkmnDEL 905
Cdd:PRK02224 632 KRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEEL---------------EEL 696
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 1941690766 906 RLKERDVEELQLKLTKANENASFLQKSIedMTVKAEQSQQ 945
Cdd:PRK02224 697 RERREALENRVEALEALYDEAEELESMY--GDLRAELRQR 734
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1574-1837 |
1.20e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.80 E-value: 1.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1574 KEIQEMQQSLILEQEARAKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELL 1653
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1654 TAEAAQLAAHIKTLKSDFAALSKSKAELQELhscltkiLDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKE 1733
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEE-------LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1734 KETLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSfTAAQTAEDAMQIMEQMTKEKT 1813
Cdd:COG1196 388 LLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALE-EAAEEEAELEEEEEALLELLA 466
|
250 260
....*....|....*....|....
gi 1941690766 1814 ETLASLEDTKQTNAKLQNELDTLK 1837
Cdd:COG1196 467 ELLEEAALLEAALAELLEELAEAA 490
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
351-938 |
1.24e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.54 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 351 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEqELALARDGHDQHVLELEAKMDQLRTMVEaadrEKVELLNQ 430
Cdd:PRK03918 203 EEVLREINEISSELPELREELEKLEKEVKELEELKEEIE-ELEKELESLEGSKRKLEEKIRELEERIE----ELKKEIEE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 431 LEEEKRKVEDLQfRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAGDvdmslSLLQEISSLQ 510
Cdd:PRK03918 278 LEEKVKELKELK-EKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-----ELKKKLKELE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 511 EKLEVTRTDHQ--REITSLKEhfgaREETHQKEIKALytATEKLSKENESLKSKLEHANKENSDVIALwKSKLETAIASH 588
Cdd:PRK03918 352 KRLEELEERHElyEEAKAKKE----ELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITAR-IGELKKEIKEL 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 589 QQAMEELKVsfskglgtetaefAELKTQIEKMRLDYQHEiENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENsLEAIR 668
Cdd:PRK03918 425 KKAIEELKK-------------AKGKCPVCGRELTEEHR-KELLEEYTAELKRIEKELKEIEEKERKLRKELRE-LEKVL 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 669 SKLDKaedqhLVEMEDTLNKLQEAEIKVKE--LEVLQAKCNEQTKV---IDNFTSQLKATEEKLLDLDALRKASSEGKSE 743
Cdd:PRK03918 490 KKESE-----LIKLKELAEQLKELEEKLKKynLEELEKKAEEYEKLkekLIKLKGEIKSLKKELEKLEELKKKLAELEKK 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 744 MKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLsevsqvkETLEKELQILKEKFAEASEEAVS 823
Cdd:PRK03918 565 LDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKEL-------EREEKELKKLEEELDKAFEELAE 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 824 VQRSMQETVNKLHQK-----EEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdnssql 898
Cdd:PRK03918 638 TEKRLEELRKELEELekkysEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER----------- 706
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 1941690766 899 tkmndelrlkERDVEELQLkltkanenasfLQKSIEDMTV 938
Cdd:PRK03918 707 ----------EKAKKELEK-----------LEKALERVEE 725
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1487-2034 |
2.82e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.65 E-value: 2.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1487 KLLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQ 1566
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1567 EECHKLSKEIQEMQQSLILEQEARAKESEsslyennqlhgRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEI 1646
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEE-----------ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEEL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1647 IEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLE 1726
Cdd:COG1196 385 AEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLEL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1727 KDELLKEKETLAESYFILQKEISQLAKTNSHISA--NLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQI 1804
Cdd:COG1196 465 LAELLEEAALLEAALAELLEELAEAAARLLLLLEaeADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAL 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1805 MEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVenqkMEEFRKEIETLKQAAAQKSQQLSA 1884
Cdd:COG1196 545 AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGA----IGAAVDLVASDLREADARYYVLGD 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1885 LQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRN 1964
Cdd:COG1196 621 TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALL 700
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1965 EVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQID 2034
Cdd:COG1196 701 AEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE 770
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1640-2013 |
7.62e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.23 E-value: 7.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1640 EQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRnhevtLAEKAQVMQDNQNLLAE 1719
Cdd:PRK03918 199 EKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRK-----LEEKIRELEERIEELKK 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1720 KSEMMLEKDELLKEKETLAESYFIL--------------QKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRE 1785
Cdd:PRK03918 274 EIEELEEKVKELKELKEKAEEYIKLsefyeeyldelreiEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKR 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1786 LETLQSFtaAQTAEDAMQIMEQMTKEKTETlasledTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFR 1865
Cdd:PRK03918 354 LEELEER--HELYEEAKAKKEELERLKKRL------TGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELK 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1866 KEIETLKQAAAQKSQQLSALQEEN-----VKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKK---RESKFIKD---A 1934
Cdd:PRK03918 426 KAIEELKKAKGKCPVCGRELTEEHrkellEEYTAELKRIEKEL---KEIEEKERKLRKELRELEKvlkKESELIKLkelA 502
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1941690766 1935 DEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSS 2013
Cdd:PRK03918 503 EQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEE 581
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
407-1130 |
1.19e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 60.52 E-value: 1.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 407 EAKMDQLRTMVEAADREKVELLnqLEEEKRKVEDLQFRVEEESITKGDLE------VATVSEKSRIMELEKDLALRV--- 477
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESNELHEKQKfylrqsVIDLQTKLQEMQMERDAMADIrrr 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 478 --QEVAELRRRLESNKPAGDVDMSLS--LLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEI----------- 542
Cdd:pfam15921 136 esQSQEDLRNQLQNTVHELEAAKCLKedMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIyehdsmstmhf 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 543 KALYTATEKLSKENES----LKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIE 618
Cdd:pfam15921 216 RSLGSAISKILRELDTeisyLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQAN 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 619 KMrldyQHEIENLQNQ---QDSERAAHAKEMEA----LRAKLMKVIKEKENSLEAIRSKLDKAEDQhLVEMEDTLNKL-Q 690
Cdd:pfam15921 296 SI----QSQLEIIQEQarnQNSMYMRQLSDLEStvsqLRSELREAKRMYEDKIEELEKQLVLANSE-LTEARTERDQFsQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 691 EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEK----LLDLDALRKASSEGKSEMKKLRQQLEA--------AEKQI 758
Cdd:pfam15921 371 ESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRdtgnSITIDHLRRELDDRNMEVQRLEALLKAmksecqgqMERQM 450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 759 KHLEiEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQK 838
Cdd:pfam15921 451 AAIQ-GKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLK 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 839 EEQFNMLSSDLEKLRENLADMEA---KFREKDEREEQLIKAKEKLENDIAEIMKMSGdnSSQLTKMNDELRLKERDVEEL 915
Cdd:pfam15921 530 LQELQHLKNEGDHLRNVQTECEAlklQMAEKDKVIEILRQQIENMTQLVGQHGRTAG--AMQVEKAQLEKEINDRRLELQ 607
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 916 QLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSD-LEKKMETSHNQCQELKARYERATSETKTKH 994
Cdd:pfam15921 608 EFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDqLLNEVKTSRNELNSLSEDYEVLKRNFRNKS 687
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 995 EEI----------LQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSakkEIELMSEELRGLKSEK 1064
Cdd:pfam15921 688 EEMetttnklkmqLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQS---KIQFLEEAMTNANKEK 764
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1941690766 1065 QLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWS--VNETLNLEKEKF-LEEKQDAEKYYEQE 1130
Cdd:pfam15921 765 HFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEkvANMEVALDKASLqFAECQDIIQRQEQE 833
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
357-860 |
1.89e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 60.13 E-value: 1.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 357 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELALARDG-------HDQHVLELEAKMDQLRTMVEAADREKV 425
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIIQEQarnqnsmYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 426 ELLNQLEEekrkvedlQFRVEEESITKGDLEVATVSEKSRIM--ELEKDLALRVQEVAELRRRLESNKPAGDVDMSLSLl 503
Cdd:pfam15921 342 DKIEELEK--------QLVLANSELTEARTERDQFSQESGNLddQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSI- 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 504 qEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENeSLKSKLEHANKENSDVIALWKSKLET 583
Cdd:pfam15921 413 -TIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVS-SLTAQLESTKEMLRKVVEELTAKKMT 490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 584 aIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQhEIENLQNQQDSERAAHAkEMEALRAKLmkviKEKENS 663
Cdd:pfam15921 491 -LESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQ-ELQHLKNEGDHLRNVQT-ECEALKLQM----AEKDKV 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 664 LEAIRSKLDKAED---QH-------LVEMEDTLNKLQEAEIKVKELEVLQAKCN---------------EQTKVIDNFTS 718
Cdd:pfam15921 564 IEILRQQIENMTQlvgQHgrtagamQVEKAQLEKEINDRRLELQEFKILKDKKDakirelearvsdlelEKVKLVNAGSE 643
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 719 QLKATEEKLLDLDAL-------------------------RKASSEGKSEMKKLRQQLEAAEKQI-------KHLEIEKN 766
Cdd:pfam15921 644 RLRAVKDIKQERDQLlnevktsrnelnslsedyevlkrnfRNKSEEMETTTNKLKMQLKSAQSELeqtrntlKSMEGSDG 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 767 AESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHqkeeqfnMLS 846
Cdd:pfam15921 724 HAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELE-------VLR 796
|
570
....*....|....
gi 1941690766 847 SDLEKLRENLADME 860
Cdd:pfam15921 797 SQERRLKEKVANME 810
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
791-1904 |
2.06e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 59.80 E-value: 2.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 791 ENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDERE 870
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 871 EQLIKAKEKLENDIAEImkmsgdnssqltkmndELRLKERDVEELQLKLTKANENASFlqKSIEDMTVKAEQSQQEAAKK 950
Cdd:pfam01576 92 QQLQNEKKKMQQHIQDL----------------EEQLDEEEAARQKLQLEKVTTEAKI--KKLEEDILLLEDQNSKLSKE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 951 HEEEKKELERKLSDLEKKMETSHNqCQELKARYERATSETK---TKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELE 1027
Cdd:pfam01576 154 RKLLEERISEFTSNLAEEEEKAKS-LSKLKNKHEAMISDLEerlKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1028 ELRKQAdkaksltylltsAKKEIELMSEELRglksekqlLSQEGNDlkleNGSLLSKLVELEAKIALLQGDqqklwsvne 1107
Cdd:pfam01576 233 ELRAQL------------AKKEEELQAALAR--------LEEETAQ----KNNALKKIRELEAQISELQED--------- 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1108 tlnLEKEKFLEEKQDAEKYYEQEHLnkEALAVEREKLLKEINVVQEELLKINVENDSLQaskvsmQALIEELQLSKDTLI 1187
Cdd:pfam01576 280 ---LESERAARNKAEKQRRDLGEEL--EALKTELEDTLDTTAAQQELRSKREQEVTELK------KALEEETRSHEAQLQ 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1188 AKTEKDQEEKDHLEDQIKKLITENFILAKDKddiiQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIAL 1267
Cdd:pfam01576 349 EMRQKHTQALEELTEQLEQAKRNKANLEKAK----QALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSES 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1268 KVERDNVLQNNRNLQLETdmllqdqEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKaelETVQLEAANTSLTKL 1347
Cdd:pfam01576 425 ERQRAELAEKLSKLQSEL-------ESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQE---ETRQKLNLSTRLRQL 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1348 LEEIKARRAvtdseciQLLHEKETLAASERRLLAEKEELLsenriiteKLHKCLEEAAHTEMSLNEKITYLTSEKEMASQ 1427
Cdd:pfam01576 495 EDERNSLQE-------QLEEEEEAKRNVERQLSTLQAQLS--------DMKKKLEEDAGTLEALEEGKKRLQRELEALTQ 559
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1428 KMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQcdQESANRSLVVQENMKLLGNIDALKKELQERKKENQ 1507
Cdd:pfam01576 560 QLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKK--QKKFDQMLAEEKAISARYAEERDRAEAEAREKETR 637
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1508 ELvaskcDLSLMLKEAQNTKKNLEKehthilqAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKEIQEMQQSLI-LE 1586
Cdd:pfam01576 638 AL-----SLARALEEALEAKEELER-------TNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEeLE 705
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1587 QEARAKESESSLYENN----------QLHGR-------MVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIieE 1649
Cdd:pfam01576 706 DELQATEDAKLRLEVNmqalkaqferDLQARdeqgeekRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKEL--E 783
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1650 KELLTAEAAQLAAhIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAE---KSEMMLE 1726
Cdd:pfam01576 784 AQIDAANKGREEA-VKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASeraRRQAQQE 862
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1727 KDELLKEKETLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSF--TAAQTAEDAMQI 1804
Cdd:pfam01576 863 RDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAerSTSQKSESARQQ 942
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1805 MEQMTKEKTETLASLEDT-----KQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKS 1879
Cdd:pfam01576 943 LERQNKELKAKLQEMEGTvkskfKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHADQYK 1022
|
1130 1140
....*....|....*....|....*
gi 1941690766 1880 QQLSALQEENVKLAEELGRSRDEVT 1904
Cdd:pfam01576 1023 DQAEKGNSRMKQLKRQLEEAEEEAS 1047
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
405-1967 |
2.16e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 60.07 E-value: 2.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 405 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVedlqFRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQEVAE-- 482
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDS----IHLEKEIKDLFDKYLEIDDEIIYINKLKLELKEKIKNISDkn 616
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 483 --LRRRLESNKPAGDVDMSLSLLQEISSLQEKLEVTRTDhqREITSLKEHFgarEETHQKEIKALYTATEKLSKEN---- 556
Cdd:TIGR01612 617 eyIKKAIDLKKIIENNNAYIDELAKISPYQVPEHLKNKD--KIYSTIKSEL---SKIYEDDIDALYNELSSIVKENaidn 691
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 557 -------ESLKSKLEHA--------------------NKEN--SDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTET 607
Cdd:TIGR01612 692 tedkaklDDLKSKIDKEydkiqnmetatvelhlsnieNKKNelLDIIVEIKKHIHGEINKDLNKILEDFKNKEKELSNKI 771
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 608 AEFAE-------LKTQIEKMRLDY--QHEIENLQNQQDSERAAHAKE----MEALRAKLMKVIKEKENSLEAIRSKLDK- 673
Cdd:TIGR01612 772 NDYAKekdelnkYKSKISEIKNHYndQINIDNIKDEDAKQNYDKSKEyiktISIKEDEIFKIINEMKFMKDDFLNKVDKf 851
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 674 --AEDQHLVEME-------DTLNKLQeAEIKVKELEVLQAKCNEQTKVIDNFTsqlKATEEKLLDLDALrkassegksem 744
Cdd:TIGR01612 852 inFENNCKEKIDseheqfaELTNKIK-AEISDDKLNDYEKKFNDSKSLINEIN---KSIEEEYQNINTL----------- 916
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 745 KKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELqgRELKLTNLQENlSEVSQVKETLEKELQILKEKFAEASeeavsv 824
Cdd:TIGR01612 917 KKVDEYIKICENTKESIEKFHNKQNILKEILNKNI--DTIKESNLIEK-SYKDKFDNTLIDKINELDKAFKDAS------ 987
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 825 QRSMQETVNKLHQkeeQFNMLSSDLEKLRENLadMEAKFREKDEREEQLIKAKEKLENDIAEI-------MKMSGDNSSQ 897
Cdd:TIGR01612 988 LNDYEAKNNELIK---YFNDLKANLGKNKENM--LYHQFDEKEKATNDIEQKIEDANKNIPNIeiaihtsIYNIIDEIEK 1062
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 898 LTKMNDELrLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSD-----LEKKMETS 972
Cdd:TIGR01612 1063 EIGKNIEL-LNKEILEEAEINITNFNEIKEKLKHYNFDDFGKEENIKYADEINKIKDDIKNLDQKIDhhikaLEEIKKKS 1141
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 973 HNQCQELKARYERATSETKT----KHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRK-----QADKAKSLTYLL 1043
Cdd:TIGR01612 1142 ENYIDEIKAQINDLEDVADKaisnDDPEEIEKKIENIVTKIDKKKNIYDEIKKLLNEIAEIEKdktslEEVKGINLSYGK 1221
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1044 TSAKKEIELMSEELRglKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALlqgdqqklwsvneTLNLEKEKFLEEKQDA 1123
Cdd:TIGR01612 1222 NLGKLFLEKIDEEKK--KSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEM-------------DIKAEMETFNISHDDD 1286
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1124 EKYYEQEHLNKEALAVEREKLLK---------EINVVQEELLKINVE----NDSLQASKVSMQALIEELQLSK-----DT 1185
Cdd:TIGR01612 1287 KDHHIISKKHDENISDIREKSLKiiedfseesDINDIKKELQKNLLDaqkhNSDINLYLNEIANIYNILKLNKikkiiDE 1366
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1186 LIAKTEKDQEEKDHLEDQIKKLITenfILAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCI 1265
Cdd:TIGR01612 1367 VKEYTKEIEENNKNIKDELDKSEK---LIKKIKDDINLEECKSKIESTLDDKDIDECIKKIKELKNHILSEESNIDTYFK 1443
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1266 ALKVERDNVLQNNRNLQL---ETDMLLQDQeKLNASLQAALQVKQlLRSEASGLRAQLDDASKALRKAELETVQLEAANT 1342
Cdd:TIGR01612 1444 NADENNENVLLLFKNIEMadnKSQHILKIK-KDNATNDHDFNINE-LKEHIDKSKGCKDEADKNAKAIEKNKELFEQYKK 1521
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1343 SLTKLLE-----EIKARRAVTDSECIQLLHEKETlAASERRLLAEKEElLSENRIITEKLhKCLEEAAHTEMSLNEKITY 1417
Cdd:TIGR01612 1522 DVTELLNkysalAIKNKFAKTKKDSEIIIKEIKD-AHKKFILEAEKSE-QKIKEIKKEKF-RIEDDAAKNDKSNKAAIDI 1598
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1418 LTSEKEMASQ--KMTELKKQQDSLLKEKSSLETQNGAL-LAERENSIKAIGDLKRQCDQ--ES-ANRSLVVQENMKLLGN 1491
Cdd:TIGR01612 1599 QLSLENFENKflKISDIKKKINDCLKETESIEKKISSFsIDSQDTELKENGDNLNSLQEflESlKDQKKNIEDKKKELDE 1678
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1492 IDA----LKKELQERKKENQELVASKcdlslmLKEAQNTKKNlekehtHILQAKESLDAQLNTCCSEKNILLRDGLNLQE 1567
Cdd:TIGR01612 1679 LDSeiekIEIDVDQHKKNYEIGIIEK------IKEIAIANKE------EIESIKELIEPTIENLISSFNTNDLEGIDPNE 1746
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1568 ECHKLSKEIQEMQQSLILEQEARAKESESSLYENnqlhgrmvLLEQEVEELRVcieELQSEKFVLLQEKSKSEQELAEIi 1647
Cdd:TIGR01612 1747 KLEEYNTEIGDIYEEFIELYNIIAGCLETVSKEP--------ITYDEIKNTRI---NAQNEFLKIIEIEKKSKSYLDDI- 1814
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1648 eekelltaEAAQLAAHIKTLKSDfaaLSKSKAELQELHSCLTKILDDLQRNHE-VTLAEKAQVMQDNQNLLAEKSEMMLE 1726
Cdd:TIGR01612 1815 --------EAKEFDRIINHFKKK---LDHVNDKFTKEYSKINEGFDDISKSIEnVKNSTDENLLFDILNKTKDAYAGIIG 1883
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1727 KDELLKEKEtlAESYFilqKEISQLAKtnshiSANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIME 1806
Cdd:TIGR01612 1884 KKYYSYKDE--AEKIF---INISKLAN-----SINIQIQNNSGIDLFDNINIAILSSLDSEKEDTLKFIPSPEKEPEIYT 1953
|
1530 1540 1550 1560 1570 1580 1590 1600
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1807 QMTKEKTETLASLEDTKQTNAKLQNELDTLKENN--LKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSA 1884
Cdd:TIGR01612 1954 KIRDSYDTLLDIFKKSQDLHKKEQDTLNIIFENQqlYEKIQASNELKDTLSDLKYKKEKILNDVKLLLHKFDELNKLSCD 2033
|
1610 1620 1630 1640 1650 1660 1670 1680
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1885 LQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELE--KL 1962
Cdd:TIGR01612 2034 SQNYDTILELSKQDKIKEKIDNYEKEKEKFGIDFDVKAMEEKFDNDIKDIEKFENNYKHSEKDNHDFSEEKDNIIQskKK 2113
|
....*
gi 1941690766 1963 RNEVT 1967
Cdd:TIGR01612 2114 LKELT 2118
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
354-906 |
2.97e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.16 E-value: 2.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 354 QEALKEKQQhIEQLLAERDLeRAEVAKATSHVGEIEQELALARDGHDQHVLEL-EAKMDQLRTMVEAADREKVELLNQLE 432
Cdd:COG4913 242 EALEDAREQ-IELLEPIREL-AERYAAARERLAELEYLRAALRLWFAQRRLELlEAELEELRAELARLEAELERLEARLD 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 433 EEKRKVEDLQFRVEEESitkGDlevatvseksRIMELEKDLALRVQEVAELRRRLESnkpagdvdmslsLLQEISSLQEK 512
Cdd:COG4913 320 ALREELDELEAQIRGNG---GD----------RLEQLEREIERLERELEERERRRAR------------LEALLAALGLP 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 513 LEVTR---TDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEH--ANKEN--SDVIALwKSKLETAI 585
Cdd:COG4913 375 LPASAeefAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASleRRKSNipARLLAL-RDALAEAL 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 586 ASHQQAM----EELKV---------SFSKGLGT-------ETAEFAELKTQIE----KMRLDYQHEIENLQNQQDSERAA 641
Cdd:COG4913 454 GLDEAELpfvgELIEVrpeeerwrgAIERVLGGfaltllvPPEHYAAALRWVNrlhlRGRLVYERVRTGLPDPERPRLDP 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 642 H--AKEME--------------ALRAKLMKV------------------IKEKENSLE-----AIRS----------KLD 672
Cdd:COG4913 534 DslAGKLDfkphpfrawleaelGRRFDYVCVdspeelrrhpraitragqVKGNGTRHEkddrrRIRSryvlgfdnraKLA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 673 KAEDQhLVEMEDTLNKLQEAEIKVK-ELEVLQAKCNEQTKVIDNFTSQL--KATEEKLLDLDALRKASSEGKSEMKKLRQ 749
Cdd:COG4913 614 ALEAE-LAELEEELAEAEERLEALEaELDALQERREALQRLAEYSWDEIdvASAEREIAELEAELERLDASSDDLAALEE 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 750 QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELqiLKEKFAEASEEAV------S 823
Cdd:COG4913 693 QLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL--LEERFAAALGDAVerelreN 770
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 824 VQRSMQETVNKLHQKEEQ-----------FNMLSSD--------------LEKLREN-LADMEAKFRE-KDEREEQLIKA 876
Cdd:COG4913 771 LEERIDALRARLNRAEEEleramrafnreWPAETADldadleslpeylalLDRLEEDgLPEYEERFKElLNENSIEFVAD 850
|
650 660 670
....*....|....*....|....*....|.
gi 1941690766 877 -KEKLENDIAEImkmsgdnSSQLTKMNDELR 906
Cdd:COG4913 851 lLSKLRRAIREI-------KERIDPLNDSLK 874
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
845-1741 |
3.17e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 59.21 E-value: 3.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 845 LSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANE 924
Cdd:pfam02463 147 IAMMKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYL 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 925 NASFLQKsiedmtvkaeqsqqeaakkheeekkelerklsdLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKT 1004
Cdd:pfam02463 227 LYLDYLK---------------------------------LNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKE 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1005 LLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTyllTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSK 1084
Cdd:pfam02463 274 NKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRK---VDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIK 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1085 LVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLnkealavEREKLLKEINVVQEELLKINVENDS 1164
Cdd:pfam02463 351 REAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELE-------LKSEEEKEAQLLLELARQLEDLLKE 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1165 LQASKVSMQALIEELQLSKDtliaktEKDQEEKDHLEDQIKKLITENFILaKDKDDIIQKLQRSYEELVKDQKALVQETE 1244
Cdd:pfam02463 424 EKKEELEILEEEEESIELKQ------GKLTEEKEELEKQELKLLKDELEL-KKSEDLLKETQLVKLQEQLELLLSRQKLE 496
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1245 DLTAEKKSALEKLSNLDNTCIALKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDAS 1324
Cdd:pfam02463 497 ERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLG 576
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1325 KALRKAELETVQLEAANTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEA 1404
Cdd:pfam02463 577 ARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEE 656
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1405 AHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDL------KRQCDQESANR 1478
Cdd:pfam02463 657 GLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAeelladRVQEAQDKINE 736
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1479 SLVVQENMKLLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNIL 1558
Cdd:pfam02463 737 ELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAEL 816
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1559 LRDGLNLQEECHKLSKEIQEMQQSLILEQEARAKESESSLYENNQlhgrmvLLEQEVEELRVCIEELQSEKFVLLQEKSK 1638
Cdd:pfam02463 817 LEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEE------EITKEELLQELLLKEEELEEQKLKDELES 890
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1639 SEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAalsKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLA 1718
Cdd:pfam02463 891 KEEKEKEEKKELEEESQKLNLLEEKENEIEERIK---EEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLL 967
|
890 900
....*....|....*....|...
gi 1941690766 1719 EKSEMMLEKDELLKEKETLAESY 1741
Cdd:pfam02463 968 AKEELGKVNLMAIEEFEEKEERY 990
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
638-1178 |
3.47e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.90 E-value: 3.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 638 ERAAHAkemealRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEmedtlnKLQEAEIKVKELEVLQAKCNEQ----TKVI 713
Cdd:PRK02224 169 ERASDA------RLGVERVLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELDEEIERYEEQreqaRETR 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 714 DNFTSQLKATEEKLLDLDALRKASSE--------------GKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITREL 779
Cdd:PRK02224 237 DEADEVLEEHEERREELETLEAEIEDlretiaeterereeLAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARR 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 780 QGRELKLTNLQENLSEVSQVKETLEKELQILKEKFA-------EASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKL 852
Cdd:PRK02224 317 EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADdleeraeELREEAAELESELEEAREAVEDRREEIEELEEEIEEL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 853 RENLADMEAKFREKDEREEQLIKAKEKLENDIAEimkmsgdnssqltkMNDELRLKERDVEELQlKLTKANENASFLQKS 932
Cdd:PRK02224 397 RERFGDAPVDLGNAEDFLEELREERDELREREAE--------------LEATLRTARERVEEAE-ALLEAGKCPECGQPV 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 933 IEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETShNQCQELKARYERaTSETKTKHEEILQNLQKTLLDTEDKL 1012
Cdd:PRK02224 462 EGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERA-EDLVEAEDRIER-LEERREDLEELIAERRETIEEKRERA 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1013 KGAREENSGLLQELEELRKQADKAKSltylltsakkEIELMSEELRGLKSEKQLLSQEGNDL-KLEngSLLSKLVELEAK 1091
Cdd:PRK02224 540 EELRERAAELEAEAEEKREAAAEAEE----------EAEEAREEVAELNSKLAELKERIESLeRIR--TLLAAIADAEDE 607
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1092 IALLQGDQQKLWSVN----ETLNLEKEKFLE---------------EKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQ 1152
Cdd:PRK02224 608 IERLREKREALAELNderrERLAEKRERKREleaefdearieeareDKERAEEYLEQVEEKLDELREERDDLQAEIGAVE 687
|
570 580
....*....|....*....|....*....
gi 1941690766 1153 ---EELLKINVENDSLQASKVSMQALIEE 1178
Cdd:PRK02224 688 nelEELEELRERREALENRVEALEALYDE 716
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
405-1249 |
3.47e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 59.03 E-value: 3.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 405 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKD-LALRVQEVAEL 483
Cdd:pfam01576 72 ELEEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDiLLLEDQNSKLS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 484 RRRLESNKPAGDVDMSLSLLQEISSLQEKLevtRTDHQREITSLkehfgarEETHQKEikalytatEKLSKENESLKSKL 563
Cdd:pfam01576 152 KERKLLEERISEFTSNLAEEEEKAKSLSKL---KNKHEAMISDL-------EERLKKE--------EKGRQELEKAKRKL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 564 EHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKgLGTETAEfaelKTQIEKMRLDYQHEIENLQNQQDSERAAha 643
Cdd:pfam01576 214 EGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALAR-LEEETAQ----KNNALKKIRELEAQISELQEDLESERAA-- 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 644 kemealRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEME---------DTLNKLQEAEIKVKELEVLQAKcNEQTKVID 714
Cdd:pfam01576 287 ------RNKAEKQRRDLGEELEALKTELEDTLDTTAAQQElrskreqevTELKKALEEETRSHEAQLQEMR-QKHTQALE 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 715 NFTSQLKATEEKLLDLD----ALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQ 790
Cdd:pfam01576 360 ELTEQLEQAKRNKANLEkakqALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQ 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 791 ENLSEVSQVKETLEKelqilkeKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDERE 870
Cdd:pfam01576 440 SELESVSSLLNEAEG-------KNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAK 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 871 EQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLT-------KANENASFLQKSIEDMTVKAEQS 943
Cdd:pfam01576 513 RNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEekaaaydKLEKTKNRLQQELDDLLVDLDHQ 592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 944 QQeaakkheeekkelerKLSDLEKKMETSHNQCQELK---ARY----ERATSETKTKHEEILqNLQKTLLDTEDKLKGAR 1016
Cdd:pfam01576 593 RQ---------------LVSNLEKKQKKFDQMLAEEKaisARYaeerDRAEAEAREKETRAL-SLARALEEALEAKEELE 656
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1017 EENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLE---NGSLLSKLVELEAKIA 1093
Cdd:pfam01576 657 RTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRlevNMQALKAQFERDLQAR 736
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1094 LLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVE---------REKLLKEINVVQEELLKINVENDS 1164
Cdd:pfam01576 737 DEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEaqidaankgREEAVKQLKKLQAQMKDLQRELEE 816
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1165 LQASKVSMQALIEE------------LQLSKDTLIAKTEKDQ--EEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSYE 1230
Cdd:pfam01576 817 ARASRDEILAQSKEsekklknleaelLQLQEDLAASERARRQaqQERDELADEIASGASGKSALQDEKRRLEARIAQLEE 896
|
890 900
....*....|....*....|....*....
gi 1941690766 1231 ELVKDQ----------KALVQETEDLTAE 1249
Cdd:pfam01576 897 ELEEEQsntellndrlRKSTLQVEQLTTE 925
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
745-1534 |
3.73e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 58.83 E-value: 3.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 745 KKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSV 824
Cdd:pfam02463 198 QELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 825 QRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKmsgdnssQLTKMNDE 904
Cdd:pfam02463 278 EKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEK-------ELKELEIK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 905 LRLKERDVEELQLKLTKANENASFLQKSIEDMTvkAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYE 984
Cdd:pfam02463 351 REAEEEEEEELEKLQEKLEQLEEELLAKKKLES--ERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 985 RATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLltsaKKEIELMSEELRGLKSEK 1064
Cdd:pfam02463 429 LEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQL----ELLLSRQKLEERSQKESK 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1065 QLLSQEGNDLKLENG-SLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREK 1143
Cdd:pfam02463 505 ARSGLKVLLALIKDGvGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLI 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1144 LLKEINVVQEELLKINVENDSLQASKvsmqALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQ 1223
Cdd:pfam02463 585 PKLKLPLKSIAVLEIDPILNLAQLDK----ATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAE 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1224 KLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIALKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAAL 1303
Cdd:pfam02463 661 KSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKL 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1304 QVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAA-----NTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERR 1378
Cdd:pfam02463 741 LKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAeerekTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEE 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1379 LLAEKEELLSENRIITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLEtqngaLLAERE 1458
Cdd:pfam02463 821 QLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELE-----SKEEKE 895
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1941690766 1459 NSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEH 1534
Cdd:pfam02463 896 KEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEE 971
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
848-1470 |
4.75e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.54 E-value: 4.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 848 DLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLtkanenas 927
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEV-------- 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 928 flqksiedmtvkaeqsqqeaakkheeekkelerklsdleKKMETSHNQCQELKARYERATSETKtKHEEILQNLQKTLLD 1007
Cdd:PRK03918 231 ---------------------------------------KELEELKEEIEELEKELESLEGSKR-KLEEKIRELEERIEE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1008 TEDKLKgAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVE 1087
Cdd:PRK03918 271 LKKEIE-ELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKE 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1088 LEAKIALLQGDQQKLWSVnetlnLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKLlkeinVVQEELLKINVENDSLQA 1167
Cdd:PRK03918 350 LEKRLEELEERHELYEEA-----KAKKEELERLKKRLTGLTPEKLEKELEELEKAKE-----EIEEEISKITARIGELKK 419
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1168 SKVSMQALIEELQLSKDTL-IAKTEKDQEEKDHLEDQIKKLITEnfiLAKDKDDIIQKLQRSYEELVKDQKALVQETEDL 1246
Cdd:PRK03918 420 EIKELKKAIEELKKAKGKCpVCGRELTEEHRKELLEEYTAELKR---IEKELKEIEEKERKLRKELRELEKVLKKESELI 496
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1247 TAEK-----KSALEKLSNLDntciALKVERDNvlQNNRNLQLETDMLLQDQEKLNASLQAalqvKQLLRSEASGLRAQLD 1321
Cdd:PRK03918 497 KLKElaeqlKELEEKLKKYN----LEELEKKA--EEYEKLKEKLIKLKGEIKSLKKELEK----LEELKKKLAELEKKLD 566
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1322 DASKalRKAELETVQLEAANTSLTKLLEEIKA-----RRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEK 1396
Cdd:PRK03918 567 ELEE--ELAELLKELEELGFESVEELEERLKElepfyNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEE 644
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1941690766 1397 LHKCLEEAahtemslneKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQngallaeRENSIKAIGDLKRQ 1470
Cdd:PRK03918 645 LRKELEEL---------EKKYSEEEYEELREEYLELSRELAGLRAELEELEKR-------REEIKKTLEKLKEE 702
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
536-1195 |
5.38e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 58.19 E-value: 5.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 536 ETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIA------LWKSKLETAIAS----------HQQAMEELKVSF 599
Cdd:pfam05483 109 QENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKennatrHLCNLLKETCARsaektkkyeyEREETRQVYMDL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 600 SKGLGTETAEFAELKTQIEKMRLDYQHEIenlqnQQDSERAAHAKEmealraKLMKVIKEKENSLEAIRSKLDKAEDQhl 679
Cdd:pfam05483 189 NNNIEKMILAFEELRVQAENARLEMHFKL-----KEDHEKIQHLEE------EYKKEINDKEKQVSLLLIQITEKENK-- 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 680 veMEDTLNKLQEAEIKVKELEvlqakcnEQTKVIDNFTSQLKATEEKLL-DLDALRKASSEGKSEMKKLRQQLEAAEKQI 758
Cdd:pfam05483 256 --MKDLTFLLEESRDKANQLE-------EKTKLQDENLKELIEKKDHLTkELEDIKMSLQRSMSTQKALEEDLQIATKTI 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 759 KHLEIEKNA--ESSKASSITRELQGRELKLTnlqenlseVSQVKETLEKELQilkekfaeaseeavsvqrsmqetvnKLH 836
Cdd:pfam05483 327 CQLTEEKEAqmEELNKAKAAHSFVVTEFEAT--------TCSLEELLRTEQQ-------------------------RLE 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 837 QKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKA---KEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVE 913
Cdd:pfam05483 374 KNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKIlaeDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIH 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 914 ELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKlsdlEKKMETSHNQCQELKARYERATSETKTK 993
Cdd:pfam05483 454 DLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLEN----KELTQEASDMTLELKKHQEDIINCKKQE 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 994 HEEI--LQNLQKTLLDTEDKLKGAREEnsgLLQELEELRKQADK----AKSLTYLLTSAKKEIELMSEELRGLKSEKQLL 1067
Cdd:pfam05483 530 ERMLkqIENLEEKEMNLRDELESVREE---FIQKGDEVKCKLDKseenARSIEYEVLKKEKQMKILENKCNNLKKQIENK 606
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1068 SQEGNDLKLENGSLLSKlveLEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKllke 1147
Cdd:pfam05483 607 NKNIEELHQENKALKKK---GSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEK---- 679
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1941690766 1148 INVVQEELLKINVENDSLQASKVS-MQALIEELQLSKDTLIakTEKDQE 1195
Cdd:pfam05483 680 AKAIADEAVKLQKEIDKRCQHKIAeMVALMEKHKHQYDKII--EERDSE 726
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
532-1090 |
5.39e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.51 E-value: 5.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 532 GAREETHQKEIKALYTATEKLSKENESLKSKLEHANkENSDVIALWKSKLETAIASHQQAMEELkvsfskglgtetaefA 611
Cdd:PRK02224 191 QLKAQIEEKEEKDLHERLNGLESELAELDEEIERYE-EQREQARETRDEADEVLEEHEERREEL---------------E 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 612 ELKTQIEKMRLDYQheienlqnQQDSERAAHAKEMEALRAKLMKVIKEKENSLEaiRSKLDKAEDQHLVEMEDTLNklqe 691
Cdd:PRK02224 255 TLEAEIEDLRETIA--------ETEREREELAEEVRDLRERLEELEEERDDLLA--EAGLDDADAEAVEARREELE---- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 692 aeikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA----LRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNA 767
Cdd:PRK02224 321 -----DRDEELRDRLEECRVAAQAHNEEAESLREDADDLEEraeeLREEAAELESELEEAREAVEDRREEIEELEEEIEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 768 ESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASE--EAVSVQRSMQET-----VNKLHQKEE 840
Cdd:PRK02224 396 LRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAllEAGKCPECGQPVegsphVETIEEDRE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 841 QFNMLSSDLEKLRENLADMEAKFrekdEREEQLIKAKEKLENdiaeimkmSGDNSSQLTKMNDElrlKERDVEELQLKLT 920
Cdd:PRK02224 476 RVEELEAELEDLEEEVEEVEERL----ERAEDLVEAEDRIER--------LEERREDLEELIAE---RRETIEEKRERAE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 921 KANENASFLQKSIEDMTVKAeQSQQEAAKKHEEEKKELERKLSDLEKKMEtSHNQCQELKARYERATSETKTKHEEiLQN 1000
Cdd:PRK02224 541 ELRERAAELEAEAEEKREAA-AEAEEEAEEAREEVAELNSKLAELKERIE-SLERIRTLLAAIADAEDEIERLREK-REA 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1001 LQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKsltylLTSAKKEIELMSEELRGLKSEKqllsqegNDLKLENGS 1080
Cdd:PRK02224 618 LAELNDERRERLAEKRERKRELEAEFDEARIEEARED-----KERAEEYLEQVEEKLDELREER-------DDLQAEIGA 685
|
570
....*....|
gi 1941690766 1081 LLSKLVELEA 1090
Cdd:PRK02224 686 VENELEELEE 695
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1414-2001 |
7.12e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.02 E-value: 7.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1414 KITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNID 1493
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1494 ALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNtccseknillrdglNLQEECHKLS 1573
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELA--------------EAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1574 KEIQEMQQSLILEQEARAKESESSLYENNQLHGRMVLLEQEVEELrvciEELQSEKFVLLQEKSKSEQELAEIIEEKELL 1653
Cdd:COG1196 372 AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERL----ERLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1654 TAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEmmLEKDELLKE 1733
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLL--AGLRGLAGA 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1734 KETLAESYFILQKEI-SQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEqmtkek 1812
Cdd:COG1196 526 VAVLIGVEAAYEAALeAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGA------ 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1813 tETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVEnqkmeefRKEIETLKQAAAQKSQQLSALQEENVKL 1892
Cdd:COG1196 600 -AVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLA-------GRLREVTLEGEGGSAGGSLTGGSRRELL 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1893 AEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGE 1972
Cdd:COG1196 672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751
|
570 580
....*....|....*....|....*....
gi 1941690766 1973 NASAKSLHSVVQTLESDKVKLELKVKNLE 2001
Cdd:COG1196 752 ALEELPEPPDLEELERELERLEREIEALG 780
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1299-2026 |
9.56e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.84 E-value: 9.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1299 LQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIKA---RRAVTDSECIQLLHEKETLAAS 1375
Cdd:PTZ00121 1226 AEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAdelKKAEEKKKADEAKKAEEKKKAD 1305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1376 ERRLLAEKEELLSENRIITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLA 1455
Cdd:PTZ00121 1306 EAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKK 1385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1456 ERENSIKAigDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKK-ENQELVASKCDLSLMLKEAQNTKKNLEKEH 1534
Cdd:PTZ00121 1386 KAEEKKKA--DEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKaDEAKKKAEEAKKADEAKKKAEEAKKAEEAK 1463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1535 THILQAKESLDAQLNTCCSEKnillrdglnlQEECHKLSKEIQEMQQSLILEQEARAKESESSLYENnqlhgrmvllEQE 1614
Cdd:PTZ00121 1464 KKAEEAKKADEAKKKAEEAKK----------ADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEE----------AKK 1523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1615 VEELRVCIEELQSEKFVLLQEKSKSEqelaEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDD 1694
Cdd:PTZ00121 1524 ADEAKKAEEAKKADEAKKAEEKKKAD----ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMK 1599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1695 LQRNHEVTLAEKAQvmqdnqnllaEKSEMMLEKDELLKEKETLAESYFILQKEISQLAKtnshisANLLESQNENRTLRK 1774
Cdd:PTZ00121 1600 LYEEEKKMKAEEAK----------KAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKK------AEELKKAEEENKIKA 1663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1775 DKnkltLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNA---KLQNELDTLKENNLKNVEELNKSK 1851
Cdd:PTZ00121 1664 AE----EAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAeekKKAEELKKAEEENKIKAEEAKKEA 1739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1852 ElltVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQ-----LLEMKKR 1926
Cdd:PTZ00121 1740 E---EDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFdnfanIIEGGKE 1816
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1927 ESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLElQLKE 2006
Cdd:PTZ00121 1817 GNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIE-KIDK 1895
|
730 740
....*....|....*....|....*...
gi 1941690766 2007 NKRQLSSSSGN--------TDTQADEDE 2026
Cdd:PTZ00121 1896 DDIEREIPNNNmagknndiIDDKLDKDE 1923
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
701-927 |
1.13e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.31 E-value: 1.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 701 VLQAKCNEQTKVIDNFTSQLKATEEKlldLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEieknaesskassitRELQ 780
Cdd:COG4942 10 LLALAAAAQADAAAEAEAELEQLQQE---IAELEKELAALKKEEKALLKQLAALERRIAALA--------------RRIR 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 781 GRELKLTNLQENLSEVSQVKETLEKELQILKEKFAE------------------ASEEAVSVQRSMQETVNKLHQKEEQF 842
Cdd:COG4942 73 ALEQELAALEAELAELEKEIAELRAELEAQKEELAEllralyrlgrqpplalllSPEDFLDAVRRLQYLKYLAPARREQA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 843 NMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKA 922
Cdd:COG4942 153 EELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
....*
gi 1941690766 923 NENAS 927
Cdd:COG4942 233 EAEAA 237
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2126-2142 |
1.56e-07 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.00 E-value: 1.56e-07
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
742-945 |
1.69e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.93 E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 742 SEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEA 821
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 822 VSVQRSMQETVNKLHQKEEQ----FNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQ 897
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQpplaLLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1941690766 898 LTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQ 945
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1343-1872 |
2.29e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.18 E-value: 2.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1343 SLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAHTEMSLNEKITYLTSEK 1422
Cdd:TIGR04523 128 KLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLK 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1423 EMASQ------KMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALK 1496
Cdd:TIGR04523 208 KKIQKnkslesQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELE 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1497 KELQERKKENQELVASKC-----DLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNillrdglNLQEECHK 1571
Cdd:TIGR04523 288 KQLNQLKSEISDLNNQKEqdwnkELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELT-------NSESENSE 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1572 LSKEIQEMQQSLILEQearaKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKE 1651
Cdd:TIGR04523 361 KQRELEEKQNEIEKLK----KENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETII 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1652 LLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELL 1731
Cdd:TIGR04523 437 KNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLT 516
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1732 KEKETLAESYFILQKEISQLAKTNSHISANL--LESQNENRTLRKDKNKLTLKIREL-ETLQSFTAAQTAEDamQIMEQM 1808
Cdd:TIGR04523 517 KKISSLKEKIEKLESEKKEKESKISDLEDELnkDDFELKKENLEKEIDEKNKEIEELkQTQKSLKKKQEEKQ--ELIDQK 594
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1941690766 1809 TKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLK 1872
Cdd:TIGR04523 595 EKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIR 658
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1488-2065 |
2.30e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 56.28 E-value: 2.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1488 LLGNIDALKKELQERKKENQElvaskcDLSLMLKEAQNTKKNLEKEH----THILQAKESLDAQLNTCCSEKNILlrdgl 1563
Cdd:pfam15921 236 LKGRIFPVEDQLEALKSESQN------KIELLLQQHQDRIEQLISEHeveiTGLTEKASSARSQANSIQSQLEII----- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1564 nlQEEchklSKEIQEMQQSLILEQEARAKESESSLYENNQLHgrmvllEQEVEELrvcieelqsEKFVLLqekskSEQEL 1643
Cdd:pfam15921 305 --QEQ----ARNQNSMYMRQLSDLESTVSQLRSELREAKRMY------EDKIEEL---------EKQLVL-----ANSEL 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1644 AEIIEEKELLTAEAAQLAAHIKTLKSDfaaLSKSKAELQeLHSCLTKILDDLQRNHEVTLAEKAQVMqDNQNLLAEKSEM 1723
Cdd:pfam15921 359 TEARTERDQFSQESGNLDDQLQKLLAD---LHKREKELS-LEKEQNKRLWDRDTGNSITIDHLRREL-DDRNMEVQRLEA 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1724 MLE--KDELLKEKETLAESyfiLQKEISQLAKTNSHISAnlLESQNEnrTLRKDKNKLTLKIRELETLQSFTAAQTA--E 1799
Cdd:pfam15921 434 LLKamKSECQGQMERQMAA---IQGKNESLEKVSSLTAQ--LESTKE--MLRKVVEELTAKKMTLESSERTVSDLTAslQ 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1800 DAMQIMEQMTKEKTETLASLEDTKQTNAKLQNEldtlkENNLKNVE-ELNKSKELLTVENQKMEEFRKEIETLKQAAAQK 1878
Cdd:pfam15921 507 EKERAIEATNAEITKLRSRVDLKLQELQHLKNE-----GDHLRNVQtECEALKLQMAEKDKVIEILRQQIENMTQLVGQH 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1879 SQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERsvlNNQLLEMKKReskfIKDADEEKASLQKSISITSALLTEKDAE 1958
Cdd:pfam15921 582 GRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKK---DAKIRELEAR----VSDLELEKVKLVNAGSERLRAVKDIKQE 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1959 LEKLRNEVTVLRGE-NASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDfLN 2037
Cdd:pfam15921 655 RDQLLNEVKTSRNElNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMG-MQ 733
|
570 580
....*....|....*....|....*...
gi 1941690766 2038 SVIVDLQRKNQDLKMKVEMMSEAALNGN 2065
Cdd:pfam15921 734 KQITAKRGQIDALQSKIQFLEEAMTNAN 761
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1346-1863 |
3.64e-07 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 55.52 E-value: 3.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1346 KLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMA 1425
Cdd:pfam05557 58 RLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEEL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1426 SQKMTELKKQQDSLLKEKSSLETQNgALLAERENSIKaigDLKRQCdQESANRSLVVQENMKLLGNIDALKKELQERKKE 1505
Cdd:pfam05557 138 QERLDLLKAKASEAEQLRQNLEKQQ-SSLAEAEQRIK---ELEFEI-QSQEQDSEIVKNSKSELARIPELEKELERLREH 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1506 NQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQA------KESLDAQLNtccSEKNILLRDGLNLQEECHKLSKEIQEM 1579
Cdd:pfam05557 213 NKHLNENIENKLLLKEEVEDLKRKLEREEKYREEAatleleKEKLEQELQ---SWVKLAQDTGLNLRSPEDLSRRIEQLQ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1580 QQSLILEQEARAKESESSLYENNQLhgrmvLLEQEVEELRVCIEELQSekfvllqeKSKSEQELAEIIEEKE-LLTAEAA 1658
Cdd:pfam05557 290 QREIVLKEENSSLTSSARQLEKARR-----ELEQELAQYLKKIEDLNK--------KLKRHKALVRRLQRRVlLLTKERD 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1659 QLAAHIKTLKSDFaALSKSKAELQELHSCLTKILDDLQRNHEVTLA--EKAQVMQDNQNLLAEKSEM---MLEKDELLKE 1733
Cdd:pfam05557 357 GYRAILESYDKEL-TMSNYSPQLLERIEEAEDMTQKMQAHNEEMEAqlSVAEEELGGYKQQAQTLERelqALRQQESLAD 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1734 KETLAESYFILQKEISQLAKTNSHI--SANLLESQNENRTLRKDKNKLTLKIREletLQSFTAAQTAEDAMQIMEQMTKE 1811
Cdd:pfam05557 436 PSYSKEEVDSLRRKLETLELERQRLreQKNELEMELERRCLQGDYDPKKTKVLH---LSMNPAAEAYQQRKNQLEKLQAE 512
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1941690766 1812 KTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEE 1863
Cdd:pfam05557 513 IERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLDLRKELESAELKNQRLKE 564
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1773-2061 |
4.24e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.33 E-value: 4.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1773 RKDKNKLTLKIRELETLQSFTAAQTAEDAMQImEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKE 1852
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAEL-EELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1853 LLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEenvKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIK 1932
Cdd:COG1196 303 DIARLEERRRELEERLEELEEELAELEEELEELEE---ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1933 DADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLS 2012
Cdd:COG1196 380 ELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEE 459
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1941690766 2013 SSSGNTDTQADEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAA 2061
Cdd:COG1196 460 ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1380-2011 |
4.52e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 55.11 E-value: 4.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1380 LAEKEELLSENRIITEKLHKCLEEaahtemslnekityLTSEKEMASQKMTELKKQQDSLLKEKSSleTQNGALLAEREN 1459
Cdd:pfam05483 101 LKQKENKLQENRKIIEAQRKAIQE--------------LQFENEKVSLKLEEEIQENKDLIKENNA--TRHLCNLLKETC 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1460 SIKAIGDLKRQCDQESANrslvvQENMKLLGNIDALKKELQERKKENQElvaSKCDLSLMLKEAQNTKKNLEKEHTHILQ 1539
Cdd:pfam05483 165 ARSAEKTKKYEYEREETR-----QVYMDLNNNIEKMILAFEELRVQAEN---ARLEMHFKLKEDHEKIQHLEEEYKKEIN 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1540 AKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKEIQEMQQ-------SLILEQEARAKESESSLYENNQLHGRMVLLE 1612
Cdd:pfam05483 237 DKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKlqdenlkELIEKKDHLTKELEDIKMSLQRSMSTQKALE 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1613 QEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEE--------KELLTAEAAQLAAHIKTLKSDFAALSKSKAELQEL 1684
Cdd:pfam05483 317 EDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEfeattcslEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEM 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1685 hscltkilDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDEL------------LKEKE-----------TLAESY 1741
Cdd:pfam05483 397 --------TKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELkgkeqelifllqAREKEihdleiqltaiKTSEEH 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1742 FI-----LQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIR------------------ELETLQSfTAAQTA 1798
Cdd:pfam05483 469 YLkevedLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKkhqediinckkqeermlkQIENLEE-KEMNLR 547
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1799 EDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQK 1878
Cdd:pfam05483 548 DELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAE 627
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1879 SQQLSALQEENVKLAEELGRSRdevtshQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSAL------- 1951
Cdd:pfam05483 628 NKQLNAYEIKVNKLELELASAK------QKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIdkrcqhk 701
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1941690766 1952 LTEKDAELEKLRNEVTVLRGENASAKSLH-SVVQTLESDKVKLELKVKNLELQLKENKRQL 2011
Cdd:pfam05483 702 IAEMVALMEKHKHQYDKIIEERDSELGLYkNKEQEQSSAKAALEIELSNIKAELLSLKKQL 762
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1165-1942 |
8.72e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 54.35 E-value: 8.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1165 LQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQ----------KLQRSYEELVK 1234
Cdd:pfam15921 108 LRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEdsntqieqlrKMMLSHEGVLQ 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1235 DQKALVQETEDLTAEKKSALEKLSNLDNTCIALKVERdnVLqnnRNLQLETDML------LQDQ-EKLNASLQAALQVKq 1307
Cdd:pfam15921 188 EIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAISK--IL---RELDTEISYLkgrifpVEDQlEALKSESQNKIELL- 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1308 llrseasgLRAQLDDASKALRKAELEtvqleaantsLTKLLEEIKARRAVTDSECIQLlhekETLAASERRLLAEKEELL 1387
Cdd:pfam15921 262 --------LQQHQDRIEQLISEHEVE----------ITGLTEKASSARSQANSIQSQL----EIIQEQARNQNSMYMRQL 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1388 SENRIITEKLHKCLEEAAHTemsLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLA-----ERENSIK 1462
Cdd:pfam15921 320 SDLESTVSQLRSELREAKRM---YEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLAdlhkrEKELSLE 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1463 AIGDlKRQCDQESANRSlvvqenmkllgNIDALKKELQERKKENQELVASkcdLSLMLKEAQNtkkNLEKEHTHILQAKE 1542
Cdd:pfam15921 397 KEQN-KRLWDRDTGNSI-----------TIDHLRRELDDRNMEVQRLEAL---LKAMKSECQG---QMERQMAAIQGKNE 458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1543 SLD--AQLNTCCSEKNILLRDGLNlQEECHKLSKEIQEMQQSLI---LEQEARAKESESSlyENNQLHGRMVLLEQEVEE 1617
Cdd:pfam15921 459 SLEkvSSLTAQLESTKEMLRKVVE-ELTAKKMTLESSERTVSDLtasLQEKERAIEATNA--EITKLRSRVDLKLQELQH 535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1618 LRVCIEELQSEKF------VLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAA-LSKSKAELQELhscltK 1690
Cdd:pfam15921 536 LKNEGDHLRNVQTecealkLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKeINDRRLELQEF-----K 610
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1691 ILDDlqrnhevtlAEKAQVmqdnQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLAktnshisanllesqNENR 1770
Cdd:pfam15921 611 ILKD---------KKDAKI----RELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLL--------------NEVK 663
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1771 TLRKDKNKLTlkiRELETLQSFTAAQTAEdamqiMEQMT-KEKTETLASLEDTKQTnaklQNELDTLKENNLKNVEELNK 1849
Cdd:pfam15921 664 TSRNELNSLS---EDYEVLKRNFRNKSEE-----METTTnKLKMQLKSAQSELEQT----RNTLKSMEGSDGHAMKVAMG 731
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1850 SKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSrdeVTSHQKLEEERSVLNNQLLEMKKRESK 1929
Cdd:pfam15921 732 MQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTV---ATEKNKMAGELEVLRSQERRLKEKVAN 808
|
810
....*....|...
gi 1941690766 1930 FikDADEEKASLQ 1942
Cdd:pfam15921 809 M--EVALDKASLQ 819
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
627-1051 |
8.74e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.00 E-value: 8.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 627 EIENLQNQQDSERAAHAKEMEALRAKL------MKVIKEKENSLEAIRSKLDKAEDQ--HLVEMEDTLNKLQEAEIKVKE 698
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELkeaeekEEEYAELQEELEELEEELEELEAEleELREELEKLEKLLQLLPLYQE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 699 LEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQL-EAAEKQIKHLEIEKNAESSKASSITR 777
Cdd:COG4717 134 LEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAELEE 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 778 ELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEE------------QFNML 845
Cdd:COG4717 214 ELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAgvlflvlgllalLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 846 SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANEN 925
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 926 ASFLQ---KSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQ 1002
Cdd:COG4717 374 ALLAEagvEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELRE 453
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1003 K--------TLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIE 1051
Cdd:COG4717 454 ElaeleaelEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYR 510
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
410-936 |
1.22e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 53.75 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 410 MDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESitkgdlEVATVSEKSRIMELEKDLALRVQEVAELRRRLES 489
Cdd:PRK01156 185 IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLS------IEYNNAMDDYNNLKSALNELSSLEDMKNRYESEI 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 490 NKPAGDVDMSLSLLQEISSLQEKLE--------VTRT-------------DHQREITSLKEHFGAREETHQK--EIKALY 546
Cdd:PRK01156 259 KTAESDLSMELEKNNYYKELEERHMkiindpvyKNRNyindyfkykndieNKKQILSNIDAEINKYHAIIKKlsVLQKDY 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 547 TATEKLSKENESLKSKLEHANKENSDVIALWKS--KLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDY 624
Cdd:PRK01156 339 NDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSieSLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 625 QHEIENLQNQQDSERAAHAKEMEALRAKLMKvikEKENSLEAIRSKLDKAEDQHLVEmeDTLNKLQEAEIKVKELEVLQA 704
Cdd:PRK01156 419 QDISSKVSSLNQRIRALRENLDELSRNMEML---NGQSVCPVCGTTLGEEKSNHIIN--HYNEKKSRLEEKIREIEIEVK 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 705 KCNEQTKVIDNFTSQLKATE--------EKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEkNAESSKASSIT 776
Cdd:PRK01156 494 DIDEKIVDLKKRKEYLESEEinksineyNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLE-DLDSKRTSWLN 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 777 RELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENL 856
Cdd:PRK01156 573 ALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKI 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 857 ADMEAKFREKDEREEQLIKAKEKLeNDIAEIMKMSgdnSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDM 936
Cdd:PRK01156 653 DNYKKQIAEIDSIIPDLKEITSRI-NDIEDNLKKS---RKALDDAKANRARLESTIEILRTRINELSDRINDINETLESM 728
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
607-1251 |
1.77e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.51 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 607 TAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEdtl 686
Cdd:TIGR00606 423 LKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETL--- 499
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 687 nKLQEAEIKVKELEVLQAKCNEQTKV--IDNFTSQLKATE----EKLLDLDALRKASSEGKSEM---------------- 744
Cdd:TIGR00606 500 -KKEVKSLQNEKADLDRKLRKLDQEMeqLNHHTTTRTQMEmltkDKMDKDEQIRKIKSRHSDELtsllgyfpnkkqledw 578
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 745 -KKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQvKETLEKELQILKEKFAEAS----- 818
Cdd:TIGR00606 579 lHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCG-SQDEESDLERLKEEIEKSSkqram 657
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 819 ------------EEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLR----ENLADMEAKFREKDEREEQLIKAKEKLEN 882
Cdd:TIGR00606 658 lagatavysqfiTQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLrlapDKLKSTESELKKKEKRRDEMLGLAPGRQS 737
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 883 DIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKL 962
Cdd:TIGR00606 738 IIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQG 817
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 963 SDLEKKMETSHNQCQELKARYERATSEtktkheeiLQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYL 1042
Cdd:TIGR00606 818 SDLDRTVQQVNQEKQEKQHELDTVVSK--------IELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQ 889
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1043 LTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKlwSVNETLNLEKEKFLEEKQD 1122
Cdd:TIGR00606 890 LVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKE--KVKNIHGYMKDIENKIQDG 967
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1123 AEKYYEQEHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLED 1202
Cdd:TIGR00606 968 KDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQM 1047
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 1941690766 1203 QIKKL------ITENFILAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKK 1251
Cdd:TIGR00606 1048 QVLQMkqehqkLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAEEK 1102
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1564-1963 |
1.87e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.12 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1564 NLQEECHKLSKEIQEMQQSL--ILEQEARAKES----ESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKS 1637
Cdd:PRK02224 203 DLHERLNGLESELAELDEEIerYEEQREQARETrdeaDEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVR 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1638 KSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQE-LHSCLTKILDdlQRNHEVTLAEKAQVMQDNQNL 1716
Cdd:PRK02224 283 DLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDrLEECRVAAQA--HNEEAESLREDADDLEERAEE 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1717 LAEK-----SEMMLEKDELLKEKETLAEsyfiLQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELE-TLQ 1790
Cdd:PRK02224 361 LREEaaeleSELEEAREAVEDRREEIEE----LEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEaTLR 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1791 sfTAAQTAEDAMQIMEQ-------MTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQ--KM 1861
Cdd:PRK02224 437 --TARERVEEAEALLEAgkcpecgQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRieRL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1862 EEFRKEIETL----KQAAAQKSQQLSALQEENVKLAEELGRSRDEVTS-HQKLEEERSVLNNqlLEMKKRESKfikdadE 1936
Cdd:PRK02224 515 EERREDLEELiaerRETIEEKRERAEELRERAAELEAEAEEKREAAAEaEEEAEEAREEVAE--LNSKLAELK------E 586
|
410 420
....*....|....*....|....*..
gi 1941690766 1937 EKASLQKsISITSALLTEKDAELEKLR 1963
Cdd:PRK02224 587 RIESLER-IRTLLAAIADAEDEIERLR 612
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
736-1080 |
3.09e-06 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 52.91 E-value: 3.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 736 ASSEGKsemkklrQQLEAAEKQIKHLEIEKNAESSKASSitrELQGRELKlTNLQENLSEVSQVKETLEKELQILKEKFA 815
Cdd:NF012221 1536 ATSESS-------QQADAVSKHAKQDDAAQNALADKERA---EADRQRLE-QEKQQQLAAISGSQSQLESTDQNALETNG 1604
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 816 EASEEAVSV-QRSMQETVNKLHQKEEQFNMLSSDLEKL----RENLADmeakfREKDEREEQLIKAKEKLENDIAEImkm 890
Cdd:NF012221 1605 QAQRDAILEeSRAVTKELTTLAQGLDALDSQATYAGESgdqwRNPFAG-----GLLDRVQEQLDDAKKISGKQLADA--- 1676
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 891 SGDNSSQLTKMNDELRLKERDVEelqlkltKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKElerklsdlEKKME 970
Cdd:NF012221 1677 KQRHVDNQQKVKDAVAKSEAGVA-------QGEQNQANAEQDIDDAKADAEKRKDDALAKQNEAQQA--------ESDAN 1741
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 971 TSHNQCQElkaRYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRkqaDKAKSLTYLLTSAKKEI 1050
Cdd:NF012221 1742 AAANDAQS---RGEQDASAAENKANQAQADAKGAKQDESDKPNRQGAAGSGLSGKAYSVE---GVAEPGSHINPDSPAAA 1815
|
330 340 350
....*....|....*....|....*....|....*.
gi 1941690766 1051 ------ELMSEELRGLKSEKQLLsqegNDLKLENGS 1080
Cdd:NF012221 1816 dgrfseGLTEQEQEALEGATNAV----NRLQINAGS 1847
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1140-1388 |
3.56e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 52.24 E-value: 3.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1140 EREKLLK---EINVVQEELLKINVENDSLQ-----ASKVS-----MQALIEELQLSKDTLIAKTEKDQEEkdhledqikk 1206
Cdd:PRK05771 17 YKDEVLEalhELGVVHIEDLKEELSNERLRklrslLTKLSealdkLRSYLPKLNPLREEKKKVSVKSLEE---------- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1207 litenfiLAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKsALEKLSNLDntciaLKVERdnvLQNNRNLQLETD 1286
Cdd:PRK05771 87 -------LIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIE-RLEPWGNFD-----LDLSL---LLGFKYVSVFVG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1287 MLlqDQEKLNASLQAALQVKQLLRSEASG--------LRAQLDDASKALRKAELETVQLEAANTsLTKLLEEIKARRAVT 1358
Cdd:PRK05771 151 TV--PEDKLEELKLESDVENVEYISTDKGyvyvvvvvLKELSDEVEEELKKLGFERLELEEEGT-PSELIREIKEELEEI 227
|
250 260 270
....*....|....*....|....*....|
gi 1941690766 1359 DSECIQLLHEKETLAASERRLLAEKEELLS 1388
Cdd:PRK05771 228 EKERESLLEELKELAKKYLEELLALYEYLE 257
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1495-2014 |
4.58e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 51.94 E-value: 4.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1495 LKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQakesLDAQLNTCCSEKNILLRDGLNLQEECHKLSK 1574
Cdd:TIGR04523 105 LSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKK----KEKELEKLNNKYNDLKKQKEELENELNLLEK 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1575 EIQEMQQSL--ILEQEARAKESESSLYENNQLHGRMVL----LEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIE 1648
Cdd:TIGR04523 181 EKLNIQKNIdkIKNKLLKLELLLSNLKKKIQKNKSLESqiseLKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKD 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1649 EKElltAEAAQLAAHIKTLKSDFAALSKSKAELQELHScltKILDDLQRNHEVTLAEKAQVMQDNQNllaEKSEMMLEKD 1728
Cdd:TIGR04523 261 EQN---KIKKQLSEKQKELEQNNKKIKELEKQLNQLKS---EISDLNNQKEQDWNKELKSELKNQEK---KLEEIQNQIS 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1729 ELLKEKETLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKN-------KLTLKIRELETLQSFTAAQTAEDA 1801
Cdd:TIGR04523 332 QNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQsykqeikNLESQINDLESKIQNQEKLNQQKD 411
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1802 MQImEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAA------ 1875
Cdd:TIGR04523 412 EQI-KKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLeqkqke 490
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1876 -AQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQL-LEMKKRESKFIKDADEEKASLQKSIsitsalLT 1953
Cdd:TIGR04523 491 lKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKeSKISDLEDELNKDDFELKKENLEKE------ID 564
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1941690766 1954 EKDAELEKLRNEVTVLRGENASAKSLhsvVQTLESDKVKLELKVKNLELQLKENKRQLSSS 2014
Cdd:TIGR04523 565 EKNKEIEELKQTQKSLKKKQEEKQEL---IDQKEKEKKDLIKEIEEKEKKISSLEKELEKA 622
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1492-1697 |
4.91e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 4.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1492 IDALKKELQERKKEnqelvaskcdlslmLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQEECHK 1571
Cdd:COG4942 22 AAEAEAELEQLQQE--------------IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1572 LSKEIQEMQQSLIlEQEARAKESESSLYENNQLHGRMVLLEQE----------------------VEELRVCIEELQSEK 1629
Cdd:COG4942 88 LEKEIAELRAELE-AQKEELAELLRALYRLGRQPPLALLLSPEdfldavrrlqylkylaparreqAEELRADLAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1941690766 1630 FVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQR 1697
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
625-1488 |
6.10e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.51 E-value: 6.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 625 QHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAiRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQA 704
Cdd:TIGR00618 151 QGEFAQFLKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSL-HGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELK 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 705 KCNEQTKvidnftsQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAesskassitRELQGREL 784
Cdd:TIGR00618 230 HLREALQ-------QTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQER---------INRARKAA 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 785 KLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQEtvnkLHQKEEQFNMLSSDLEKLRENlADMEAKFR 864
Cdd:TIGR00618 294 PLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSS----IEEQRRLLQTLHSQEIHIRDA-HEVATSIR 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 865 EKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDEL-----RLKERDVEELQLKLTKANENASFLQKSIEDMTVK 939
Cdd:TIGR00618 369 EISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQatidtRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAIT 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 940 AEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQcqelkaryeraTSETKTKHEEILQNLQktlldtedklkGAREEN 1019
Cdd:TIGR00618 449 CTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQ-----------ETRKKAVVLARLLELQ-----------EEPCPL 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1020 SGLLQELEELRKQADKAKSLTYLLtsakkeielmseeLRGLKSEKQLlSQEGNDLKLENGSLLSKLVELEAKIALLQGDQ 1099
Cdd:TIGR00618 507 CGSCIHPNPARQDIDNPGPLTRRM-------------QRGEQTYAQL-ETSEEDVYHQLTSERKQRASLKEQMQEIQQSF 572
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1100 QKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVERekllkeinvvQEELLKINVENDSLQASkVSMQALIEEL 1179
Cdd:TIGR00618 573 SILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQ----------HALLRKLQPEQDLQDVR-LHLQQCSQEL 641
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1180 QLSKDTLIAK----TEKDQEEKDHLEDQIKKLITENFILAkdkddiIQKLQRSYEELVKDQKALVQETEDLTAEKKSALE 1255
Cdd:TIGR00618 642 ALKLTALHALqltlTQERVREHALSIRVLPKELLASRQLA------LQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEE 715
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1256 KLSNLDNTCIALKVERDNVLQNNRNLQletDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETV 1335
Cdd:TIGR00618 716 YDREFNEIENASSSLGSDLAAREDALN---QSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNR 792
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1336 QLEAANTSLTKLLEEIKARRAvtdseciqllHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAHTEmslneki 1415
Cdd:TIGR00618 793 LREEDTHLLKTLEAEIGQEIP----------SDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYE------- 855
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1941690766 1416 tyltsekemasqkmtELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKL 1488
Cdd:TIGR00618 856 ---------------ECSKQLAQLTQEQAKIIQLSDKLNGINQIKIQFDGDALIKFLHEITLYANVRLANQSE 913
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
986-1210 |
6.49e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 6.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 986 ATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLtylLTSAKKEIELMSEELRGLKSEKQ 1065
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARR---IRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1066 LLSQEGNDLKLENGSLLSKLVEL----EAKIALLQGDQQKLWSVNETLNlekeKFLEEKQDAEKYYEQEhlnKEALAVER 1141
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLgrqpPLALLLSPEDFLDAVRRLQYLK----YLAPARREQAEELRAD---LAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1941690766 1142 EKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITE 1210
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
615-883 |
6.97e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 51.62 E-value: 6.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 615 TQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIR--SKLDKAE--DQHLVEMEDTLNKLQ 690
Cdd:COG5022 806 LGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKrfSLLKKETiyLQSAQRVELAERQLQ 885
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 691 EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE--------EKLLDL-DALRKASSEGKSEMK----KLRQQLEAAEKQ 757
Cdd:COG5022 886 ELKIDVKSISSLKLVNLELESEIIELKKSLSSDLienlefktELIARLkKLLNNIDLEEGPSIEyvklPELNKLHEVESK 965
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 758 IKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASE------------EAVSVQ 825
Cdd:COG5022 966 LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAElqsaskiissesTELSIL 1045
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 826 RSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEA--KFREKDEREEQLIKAKEKLEND 883
Cdd:COG5022 1046 KPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKqlYQLESTENLLKTINVKDLEVTN 1105
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
785-1014 |
7.27e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 7.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 785 KLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFR 864
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 865 EKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTK----MNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTvKA 940
Cdd:COG4942 101 AQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRrlqyLKYLAPARREQAEELRADLAELAALRAELEAERAELE-AL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1941690766 941 EQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKG 1014
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
791-1524 |
1.10e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.88 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 791 ENLSEVSQVKETLEKELQILKEkfaeaseEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDERE 870
Cdd:pfam05483 71 ENSEGLSRLYSKLYKEAEKIKK-------WKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQEN 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 871 EQLIKAKEKLENdIAEIMKMSGDNSSQLTKMNDELRLKERDVeelqlkLTKANENASFLQKSIEDMTVKAEQSQQEAAKK 950
Cdd:pfam05483 144 KDLIKENNATRH-LCNLLKETCARSAEKTKKYEYEREETRQV------YMDLNNNIEKMILAFEELRVQAENARLEMHFK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 951 HEEEKKELERKLSDLEKKMETSHNQCQ-------ELKARYERATSETKTKHEEILQNLQKTLLDTEDkLKGAREENSGLL 1023
Cdd:pfam05483 217 LKEDHEKIQHLEEEYKKEINDKEKQVSllliqitEKENKMKDLTFLLEESRDKANQLEEKTKLQDEN-LKELIEKKDHLT 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1024 QELEELRKQADKAKSLTYLLtsaKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSklvELEAKIALLQgdqqklw 1103
Cdd:pfam05483 296 KELEDIKMSLQRSMSTQKAL---EEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVT---EFEATTCSLE------- 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1104 svnETLNLEKEKfLEEKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLSK 1183
Cdd:pfam05483 363 ---ELLRTEQQR-LEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKE 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1184 DTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSY---EELVKDQKALVQETEDLTAEKKSALEKLSNL 1260
Cdd:pfam05483 439 QELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKlknIELTAHCDKLLLENKELTQEASDMTLELKKH 518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1261 DNTCIALKVERDNVLQNNRNLQLETDMLLQDQEKLNASL-QAALQVK-QLLRSEASGLRAQLDDASKALRKAELETV--- 1335
Cdd:pfam05483 519 QEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFiQKGDEVKcKLDKSEENARSIEYEVLKKEKQMKILENKcnn 598
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1336 ---QLEAANTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSenriITEKLHKCLEEAAHTEMSLN 1412
Cdd:pfam05483 599 lkkQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEE----IIDNYQKEIEDKKISEEKLL 674
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1413 EKITYLTSEKEMASQKMTELKKQQDSLLKEKSSL----ETQNGALLAERENSIkaiGDLKRQCDQESANRSLVVQENMKL 1488
Cdd:pfam05483 675 EEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALmekhKHQYDKIIEERDSEL---GLYKNKEQEQSSAKAALEIELSNI 751
|
730 740 750
....*....|....*....|....*....|....*.
gi 1941690766 1489 LGNIDALKKELQERKKENQELVASKCDLSLMLKEAQ 1524
Cdd:pfam05483 752 KAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDKK 787
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1067-1289 |
1.18e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 50.70 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1067 LSQEGNDLKLENgsLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEkqdAEKYYEQEHlnkealaverEKLLK 1146
Cdd:PRK05771 36 LKEELSNERLRK--LRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEE---LIKDVEEEL----------EKIEK 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1147 EINVVQEELLKINVENDSLQASKVSMQAL------IEELQLSKDTLI--AKTEKDQEEKDHLEDQIKKLITEN------- 1211
Cdd:PRK05771 101 EIKELEEEISELENEIKELEQEIERLEPWgnfdldLSLLLGFKYVSVfvGTVPEDKLEELKLESDVENVEYIStdkgyvy 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1212 ---FILAKDKDDIIQKLQR--------SYEELVKDQ-KALVQETEDLTAEKKSALEKLSNLDNTCIALKVERDNVLQNNR 1279
Cdd:PRK05771 181 vvvVVLKELSDEVEEELKKlgferlelEEEGTPSELiREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIEL 260
|
250
....*....|
gi 1941690766 1280 NLQLETDMLL 1289
Cdd:PRK05771 261 ERAEALSKFL 270
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1566-1987 |
1.18e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.54 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1566 QEECHKLSKEIQEMQQSLILEQEARAKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSE--QEL 1643
Cdd:COG4717 55 ADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPlyQEL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1644 AEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQ----VMQDNQNLLAE 1719
Cdd:COG4717 135 EALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEeleeLQQRLAELEEE 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1720 KSEMMLEKDELLKEKETLAESYFILQ-----KEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTA 1794
Cdd:COG4717 215 LEEAQEELEELEEELEQLENELEAAAleerlKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1795 AQTAEDAMQIMEQMTKEKTETLASLEdtkqtnakLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1874
Cdd:COG4717 295 REKASLGKEAEELQALPALEELEEEE--------LEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1875 AAQKSQQlSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEkaSLQKSISITSALLTE 1954
Cdd:COG4717 367 ELEQEIA-ALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEE--ELEEELEELEEELEE 443
|
410 420 430
....*....|....*....|....*....|...
gi 1941690766 1955 KDAELEKLRNEVTVLRGENASAKSLHSVVQTLE 1987
Cdd:COG4717 444 LEEELEELREELAELEAELEQLEEDGELAELLQ 476
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1175-1783 |
1.30e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.45 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1175 LIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQ------RSYEELVKDQKALVQETEDLTA 1248
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEklekevKELEELKEEIEELEKELESLEG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1249 EKKSALEKLSNLDNTcIALKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALR 1328
Cdd:PRK03918 253 SKRKLEEKIRELEER-IEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1329 KAELETVQLEaantSLTKLLEEIKARRAVtdseciqlLHEKETLAASERRLLAEKEELLSENRIIT-EKLHKCLEEAAHT 1407
Cdd:PRK03918 332 ELEEKEERLE----ELKKKLKELEKRLEE--------LEERHELYEEAKAKKEELERLKKRLTGLTpEKLEKELEELEKA 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1408 EMSLNEKITYLTSEKEMASQKMTELKKQQDSLLK---------------EKSSLETQNGALLAERENSIKAIGDLKRQCD 1472
Cdd:PRK03918 400 KEEIEEEISKITARIGELKKEIKELKKAIEELKKakgkcpvcgrelteeHRKELLEEYTAELKRIEKELKEIEEKERKLR 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1473 QESANRSLVVQENMKLLGNIDALKkELQERKKENQELVASKcdLSLMLKEAQNTKKNLEKEHTHILQAKESLDaQLNTCC 1552
Cdd:PRK03918 480 KELRELEKVLKKESELIKLKELAE-QLKELEEKLKKYNLEE--LEKKAEEYEKLKEKLIKLKGEIKSLKKELE-KLEELK 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1553 SEKNILLRDGLNLQEECHKLSKEIQEMQQSLILEQEARAKESESSLYENNQLHGRMVLLEQEVEELRVCIEELqSEKFVL 1632
Cdd:PRK03918 556 KKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL-DKAFEE 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1633 LQEKSKSEQELAEIIEEKELLTAEA--AQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVm 1710
Cdd:PRK03918 635 LAETEKRLEELRKELEELEKKYSEEeyEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKEL- 713
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1711 qdnqnllaEKSEMMLEKDELLKEK----ETLAESYFIlqKEISQLAktnSHISANLLESQNENRTLRKDKNKLTLKI 1783
Cdd:PRK03918 714 --------EKLEKALERVEELREKvkkyKALLKERAL--SKVGEIA---SEIFEELTEGKYSGVRVKAEENKVKLFV 777
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1012-1751 |
1.33e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.74 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1012 LKGAREENSGLLQELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELeak 1091
Cdd:TIGR00618 158 LKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREA--- 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1092 ialLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVER-----------EKLLKEINVVQEELLKINV 1160
Cdd:TIGR00618 235 ---LQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEEtqerinrarkaAPLAAHIKAVTQIEQQAQR 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1161 ENDSLQASKVSM--------QALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSYEEL 1232
Cdd:TIGR00618 312 IHTELQSKMRSRakllmkraAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTL 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1233 VKDQKALVQETEDLTAEKKSALEKLSnldntciALKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLLRSE 1312
Cdd:TIGR00618 392 TQKLQSLCKELDILQREQATIDTRTS-------AFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQES 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1313 ASGLRaqlddaskalrkaelETVQLEAANTSLTKLLEEIKARRAvtdsECIQLLHEKETLAASERRLLAEKEELLSENRI 1392
Cdd:TIGR00618 465 AQSLK---------------EREQQLQTKEQIHLQETRKKAVVL----ARLLELQEEPCPLCGSCIHPNPARQDIDNPGP 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1393 ITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMASqkmtELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCD 1472
Cdd:TIGR00618 526 LTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRA----SLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTE 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1473 QESanrslvvQENMKLLGNIDALKKELQErKKENQELVASKCDLSlmlKEAQNTKKNLEKEHTHILQAKESLDAQLNTCC 1552
Cdd:TIGR00618 602 KLS-------EAEDMLACEQHALLRKLQP-EQDLQDVRLHLQQCS---QELALKLTALHALQLTLTQERVREHALSIRVL 670
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1553 SEKNILLRDGL--NLQEECHKLSKEIQEMQQSLILEQEARAKESESSLYEN---NQLHGRMVLLEQEVEELRVCIEELQS 1627
Cdd:TIGR00618 671 PKELLASRQLAlqKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNeieNASSSLGSDLAAREDALNQSLKELMH 750
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1628 EKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSclTKILDDLQRnHEVTLAEKA 1707
Cdd:TIGR00618 751 QARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIG--QEIPSDEDI-LNLQCETLV 827
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 1941690766 1708 QVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQL 1751
Cdd:TIGR00618 828 QEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKI 871
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
461-1105 |
1.83e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 50.14 E-value: 1.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 461 SEKSRIMELEKDLALRVQEVAELRRRLE---SNKPAGDVDMSLSLLQEISSLQEKLEVTRTdhqreiTSLKEHFgaREET 537
Cdd:pfam07111 27 TQRPTVTMWEQDVSGDGQGPGRRGRSLElegSQALSQQAELISRQLQELRRLEEEVRLLRE------TSLQQKM--RLEA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 538 HQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQI 617
Cdd:pfam07111 99 QAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQRELEEIQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 618 EKMRLDYQHEIENL---QNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAE-DQHLVEMEDTLNKLQEAE 693
Cdd:pfam07111 179 NSLETKRAGEAKQLaeaQKEAELLRKQLSKTQEELEAQVTLVESLRKYVGEQVPPEVHSQTwELERQELLDTMQHLQEDR 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 694 IKVKE-LEVLQAKCNEQTKVI----------------------DNFTSQLKATEEKLLDLDALRKASS-EGKSEMKKLRQ 749
Cdd:pfam07111 259 ADLQAtVELLQVRVQSLTHMLalqeeeltrkiqpsdslepefpKKCRSLLNRWREKVFALMVQLKAQDlEHRDSVKQLRG 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 750 QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQ 829
Cdd:pfam07111 339 QVAELQEQVTSQSQEQAILQRALQDKAAEVEVERMSAKGLQMELSRAQEARRRQQQQTASAEEQLKFVVNAMSSTQIWLE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 830 ETVNKLHQKEEQF----NMLSSDLEKLRENLADMEAKFREKDEREEQ--LIKAKEKLENDIAEIMKMSGDNSSQLtkmND 903
Cdd:pfam07111 419 TTMTRVEQAVARIpslsNRLSYAVRKVHTIKGLMARKVALAQLRQEScpPPPPAPPVDADLSLELEQLREERNRL---DA 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 904 ELRLKERDVeelQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARY 983
Cdd:pfam07111 496 ELQLSAHLI---QQEVGRAREQGEAERQQLSEVAQQLEQELQRAQESLASVGQQLEVARQGQQESTEEAASLRQELTQQQ 572
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 984 ERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKsltylltSAKKEIELMSEELRglKSE 1063
Cdd:pfam07111 573 EIYGQALQEKVAEVETRLREQLSDTKRRLNEARREQAKAVVSLRQIQHRATQEK-------ERNQELRRLQDEAR--KEE 643
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 1941690766 1064 KQLLSQEGNDLKLENGSLLSKlveLEAKIALLQGDQQKLWSV 1105
Cdd:pfam07111 644 GQRLARRVQELERDKNLMLAT---LQQEGLLSRYKQQRLLAV 682
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
664-1249 |
2.24e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.91 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 664 LEAIRSKLDKAEDQ--HLVEMEDTLNKLQEAEIKVKELEVLQAKcneqtkvIDNFTSQLKateeklldLDALRKASSEGK 741
Cdd:COG4913 237 LERAHEALEDAREQieLLEPIRELAERYAAARERLAELEYLRAA-------LRLWFAQRR--------LELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 742 SEMKKLRQQLEAAEKQIKHLEIEK-NAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEE 820
Cdd:COG4913 302 AELARLEAELERLEARLDALREELdELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 821 AVSVQRSMQETVNKLHQKEEQfnmlssdlekLRENLADMEAKFREKDEREEQLikakeklENDIAEIMKMSGDNSSQLTK 900
Cdd:COG4913 382 FAALRAEAAALLEALEEELEA----------LEEALAEAEAALRDLRRELREL-------EAEIASLERRKSNIPARLLA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 901 M----NDELRLKERDV----EELQLKltkaNENASFlQKSIE--------DMTVKAEQSQQ----------------EAA 948
Cdd:COG4913 445 LrdalAEALGLDEAELpfvgELIEVR----PEEERW-RGAIErvlggfalTLLVPPEHYAAalrwvnrlhlrgrlvyERV 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 949 KKHEEEKKELERKLSDLEKKMETSHNQCQE-LKARYERATSETKTKHEEILQNLQKTLldTED---KLKGAREEnsgllq 1024
Cdd:COG4913 520 RTGLPDPERPRLDPDSLAGKLDFKPHPFRAwLEAELGRRFDYVCVDSPEELRRHPRAI--TRAgqvKGNGTRHE------ 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1025 eleelrKQADKAKSLTYLL-TSAKKEIELMSEELRGLKSEKQLLSQEGNDLKlengsllSKLVELEAKIALLQGDQQKLW 1103
Cdd:COG4913 592 ------KDDRRRIRSRYVLgFDNRAKLAALEAELAELEEELAEAEERLEALE-------AELDALQERREALQRLAEYSW 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1104 SVNETLNLEKEkfLEEKQDaekyyEQEHLNK-----EALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEE 1178
Cdd:COG4913 659 DEIDVASAERE--IAELEA-----ELERLDAssddlAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDE 731
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1179 LQLSKDTLIAKTEKDQEEkdHLEDQIKKLITEN------FILAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAE 1249
Cdd:COG4913 732 LQDRLEAAEDLARLELRA--LLEERFAAALGDAverelrENLEERIDALRARLNRAEEELERAMRAFNREWPAETAD 806
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
797-1040 |
2.33e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 2.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 797 SQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKA 876
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 877 KEKLENDIAEIMKMSGDNSSQLTKMndeLRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAkkheeekk 956
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLA---LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA-------- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 957 elerklsDLEKKMETSHNQCQELKARYERATSEtKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1036
Cdd:COG4942 168 -------ELEAERAELEALLAELEEERAALEAL-KAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
....
gi 1941690766 1037 KSLT 1040
Cdd:COG4942 240 AERT 243
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1704-1898 |
3.70e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 3.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1704 AEKAQVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKI 1783
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1784 RE-------------LETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1850
Cdd:COG4942 107 AEllralyrlgrqppLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1941690766 1851 KELLtveNQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGR 1898
Cdd:COG4942 187 RAAL---EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1795-2061 |
3.83e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.16 E-value: 3.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1795 AQTAEDAMQIMEQMT-KEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQ 1873
Cdd:COG1196 209 AEKAERYRELKEELKeLEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1874 AAAQKSQQLSALQEEnvkLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQksisitsALLT 1953
Cdd:COG1196 289 EEYELLAELARLEQD---IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELE-------EAEA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1954 EKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKEnkrqlssssgntdtQADEDERAQESQI 2033
Cdd:COG1196 359 ELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEA--------------LLERLERLEEELE 424
|
250 260
....*....|....*....|....*...
gi 1941690766 2034 DFLNSVIVDLQRKNQDLKMKVEMMSEAA 2061
Cdd:COG1196 425 ELEEALAELEEEEEEEEEALEEAAEEEA 452
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1674-2055 |
3.85e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.86 E-value: 3.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1674 LSKSKAELQELHSCLTKILDDLQRNHevtlAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKE-------TLAESYFILQK 1746
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTEIKKKE----KELEKLNNKYNDLKKQKEELENELNLLEKEKLniqknidKIKNKLLKLEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1747 EISQLAKTNSH---ISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTaedaMQIMEQMTKEKTETLASLEDTK 1823
Cdd:TIGR04523 202 LLSNLKKKIQKnksLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQL----NQLKDEQNKIKKQLSEKQKELE 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1824 QTNAKLQNELDTLKE-----NNLKNVEELNKSKEL----------LTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEE 1888
Cdd:TIGR04523 278 QNNKKIKELEKQLNQlkseiSDLNNQKEQDWNKELkselknqekkLEEIQNQISQNNKIISQLNEQISQLKKELTNSESE 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1889 NVKLAEELGRSRDEV-----------TSHQKLEEERSVLNNQLLEMKKRESKF---IKDADEEKASLQKSISITSALLTE 1954
Cdd:TIGR04523 358 NSEKQRELEEKQNEIeklkkenqsykQEIKNLESQINDLESKIQNQEKLNQQKdeqIKKLQQEKELLEKEIERLKETIIK 437
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1955 KDAELEKLRNEVTVLrgeNASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSssgntdtqadederaQESQID 2034
Cdd:TIGR04523 438 NNSEIKDLTNQDSVK---ELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS---------------KEKELK 499
|
410 420
....*....|....*....|.
gi 1941690766 2035 FLNSVIVDLQRKNQDLKMKVE 2055
Cdd:TIGR04523 500 KLNEEKKELEEKVKDLTKKIS 520
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
645-930 |
4.59e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.58 E-value: 4.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 645 EMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDtlNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE 724
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKE--EKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAM 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 725 EKLLDLDALRKasSEGKSEMKKLRQQLEAAE-KQIKHLEIEKNAESSKASSITRELQG-RELKLT------NLQENLSEV 796
Cdd:pfam17380 345 ERERELERIRQ--EERKRELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAaRKVKILeeerqrKIQQQKVEM 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 797 SQVK----ETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFR-----EKD 867
Cdd:pfam17380 423 EQIRaeqeEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRkilekELE 502
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1941690766 868 EREEQLIKAKEK---LENDIAEimKMSGDNSSQLTKMNDELRLKERDVEE---LQLKLTKANENASFLQ 930
Cdd:pfam17380 503 ERKQAMIEEERKrklLEKEMEE--RQKAIYEEERRREAEEERRKQQEMEErrrIQEQMRKATEERSRLE 569
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1825-2050 |
5.04e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 48.75 E-value: 5.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1825 TNAKLQNELDTLKENNLKNVEE------LNKSKELLtvenQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELG- 1897
Cdd:PRK11281 37 TEADVQAQLDALNKQKLLEAEDklvqqdLEQTLALL----DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDe 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1898 --RSRDEVTSHQKLEEERSVLNNQLLEMKKRESkfikDADEEKASLQKSISITSALLTEKDAELEKLRNEvtvLRGENAS 1975
Cdd:PRK11281 113 etRETLSTLSLRQLESRLAQTLDQLQNAQNDLA----EYNSQLVSLQTQPERAQAALYANSQRLQQIRNL---LKGGKVG 185
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1941690766 1976 AKSLHSvvqtleSDKVKLELKVKNLELQLKENKRQLSSSSGNTDTqadederaQESQIDFLNSVIVDLQRKNQDL 2050
Cdd:PRK11281 186 GKALRP------SQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDL--------LQKQRDYLTARIQRLEHQLQLL 246
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1419-1683 |
5.51e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 5.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1419 TSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKE 1498
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1499 LQERKKENQELVASkcdlslMLKEAQNTKKNLekehthILQAKESLDAqlntccseknilLRDGLNLQEECHKLSKEIQE 1578
Cdd:COG4942 99 LEAQKEELAELLRA------LYRLGRQPPLAL------LLSPEDFLDA------------VRRLQYLKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1579 MQQSLILEQEARAKesesslyennqlhgrmvlLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAA 1658
Cdd:COG4942 155 LRADLAELAALRAE------------------LEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELA 216
|
250 260
....*....|....*....|....*
gi 1941690766 1659 QLAAHIKTLKSDFAALSKSKAELQE 1683
Cdd:COG4942 217 ELQQEAEELEALIARLEAEAAAAAE 241
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1492-2001 |
5.95e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.50 E-value: 5.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1492 IDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKehthILQAKESLDAQLNTCCSEKNILLRDGLNLQEECHK 1571
Cdd:PRK02224 215 LAELDEEIERYEEQREQARETRDEADEVLEEHEERREELET----LEAEIEDLRETIAETEREREELAEEVRDLRERLEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1572 LSKEIQEMQQSLILEqearAKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKE 1651
Cdd:PRK02224 291 LEEERDDLLAEAGLD----DADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1652 LLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMmlekDELL 1731
Cdd:PRK02224 367 ELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTA----RERV 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1732 KEKETLAESYFIlqKEISQLAKTNSHISA------NLLESQNENRTLRKDKNKLTLKIRELETLQSFTA--------AQT 1797
Cdd:PRK02224 443 EEAEALLEAGKC--PECGQPVEGSPHVETieedreRVEELEAELEDLEEEVEEVEERLERAEDLVEAEDrierleerRED 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1798 AEDAMQIMEQMTKEKTETLASLEDTKQtnaKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQ---- 1873
Cdd:PRK02224 521 LEELIAERRETIEEKRERAEELRERAA---ELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERirtl 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1874 --AAAQKSQQLSALQEENVKLAEELGRSRDEVTS----HQKLEEERSVLN-NQLLEMKKRESKFIKDAD-------EEKA 1939
Cdd:PRK02224 598 laAIADAEDEIERLREKREALAELNDERRERLAEkrerKRELEAEFDEARiEEAREDKERAEEYLEQVEekldelrEERD 677
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1941690766 1940 SLQKSI-SITSALltekdAELEKLRNEVTVLRGENASAKSLHSVVQTLES--DKVKLELKVKNLE 2001
Cdd:PRK02224 678 DLQAEIgAVENEL-----EELEELRERREALENRVEALEALYDEAEELESmyGDLRAELRQRNVE 737
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1600-2034 |
5.95e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.50 E-value: 5.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1600 ENNQLHGRMVLLEQEVEELRVCIEELQSEKfvllQEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKA 1679
Cdd:PRK02224 200 EEKDLHERLNGLESELAELDEEIERYEEQR----EQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETERERE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1680 ELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLAKTNSHIS 1759
Cdd:PRK02224 276 ELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1760 ANLLESQNENRTLRKDKNKLTLKIRELETLQSF------TAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNEL 1833
Cdd:PRK02224 356 ERAEELREEAAELESELEEAREAVEDRREEIEEleeeieELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATL 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1834 DTLKENNLKNVEELNKSK--------------ELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALqEENVKLAEELGRS 1899
Cdd:PRK02224 436 RTARERVEEAEALLEAGKcpecgqpvegsphvETIEEDRERVEELEAELEDLEEEVEEVEERLERA-EDLVEAEDRIERL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1900 RDEV-TSHQKLEEERSVLNN---QLLEMKKRESKFIKDADEEKASLQKSISITSALLtEKDAELEKLRNEVTVLRGENAS 1975
Cdd:PRK02224 515 EERReDLEELIAERRETIEEkreRAEELRERAAELEAEAEEKREAAAEAEEEAEEAR-EEVAELNSKLAELKERIESLER 593
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1941690766 1976 AKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADE--DERAQESQID 2034
Cdd:PRK02224 594 IRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEfdEARIEEARED 654
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1613-2033 |
7.14e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 7.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1613 QEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHIKtlKSDFAALSKSKAELQELHSCLTKI- 1691
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAK--KAAEAAKAEAEAAADEAEAAEEKAe 1367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1692 LDDLQRNHEVTLAEKAQVMQDNQ---NLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLAKTNShisanLLESQNE 1768
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKkkaDEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADE-----AKKKAEE 1442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1769 NRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELN 1848
Cdd:PTZ00121 1443 AKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAK 1522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1849 KSKELltvenQKMEEFRKEIETLKQAAAQKSQQLSalQEENVKLAEElgrsRDEVTSHQKLEEERSVLNNQLLEMKKRES 1928
Cdd:PTZ00121 1523 KADEA-----KKAEEAKKADEAKKAEEKKKADELK--KAEELKKAEE----KKKAEEAKKAEEDKNMALRKAEEAKKAEE 1591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1929 KFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRG-ENASAKSLHSVVQTLESDKVKLELKVKNLELQLKEN 2007
Cdd:PTZ00121 1592 ARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKvEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAE 1671
|
410 420
....*....|....*....|....*.
gi 1941690766 2008 KRQLSSSSGNtdtQADEDERAQESQI 2033
Cdd:PTZ00121 1672 EDKKKAEEAK---KAEEDEKKAAEAL 1694
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1349-1979 |
7.61e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.14 E-value: 7.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1349 EEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELlsenriitEKLHKCLEEAAHTEMSLNEKITYLTSEKEMASQK 1428
Cdd:PRK03918 189 ENIEELIKEKEKELEEVLREINEISSELPELREELEKL--------EKEVKELEELKEEIEELEKELESLEGSKRKLEEK 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1429 MTELKKQQDSLLKEKSSLETQngallAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKENQE 1508
Cdd:PRK03918 261 IRELEERIEELKKEIEELEEK-----VKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1509 LVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDaqlntccseknillrdglNLQEECHKLSKEIQEMQQSLILEQE 1588
Cdd:PRK03918 336 KEERLEELKKKLKELEKRLEELEERHELYEEAKAKKE------------------ELERLKKRLTGLTPEKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1589 ARAKESESslyENNQLHGRMVLLEQEVEELRVCIEELQSEKFVL-LQEKSKSEQELAEIIEEkelLTAEAAQLAAHIKTL 1667
Cdd:PRK03918 398 KAKEEIEE---EISKITARIGELKKEIKELKKAIEELKKAKGKCpVCGRELTEEHRKELLEE---YTAELKRIEKELKEI 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1668 KSdfaALSKSKAELQELHSCLTKilddlqrnhEVTLAEKAQVMQDNQNLLAEKSEMMLEK-DELLKEKETLAESYFILQK 1746
Cdd:PRK03918 472 EE---KERKLRKELRELEKVLKK---------ESELIKLKELAEQLKELEEKLKKYNLEElEKKAEEYEKLKEKLIKLKG 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1747 EISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLqSFTAAQTAEDAMQIMEQMTKEKTEtlasLEDTKQTN 1826
Cdd:PRK03918 540 EIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEEL-GFESVEELEERLKELEPFYNEYLE----LKDAEKEL 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1827 AKLQNELDTLKEnnlknveELNKSKELLTVENQKMEEFRKEIETLKQAAAQksqqlsalqeenvklaEELGRSRDEvtsH 1906
Cdd:PRK03918 615 EREEKELKKLEE-------ELDKAFEELAETEKRLEELRKELEELEKKYSE----------------EEYEELREE---Y 668
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1941690766 1907 QKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKsisitsalLTEKDAELEKL---RNEVTVLRGENASAKSL 1979
Cdd:PRK03918 669 LELSRELAGLRAELEELEKRREEIKKTLEKLKEELEE--------REKAKKELEKLekaLERVEELREKVKKYKAL 736
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
718-1239 |
7.75e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.79 E-value: 7.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 718 SQLKATEEKLLD----LDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL 793
Cdd:pfam05483 99 AELKQKENKLQEnrkiIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYER 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 794 SEVSQV----KETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDER 869
Cdd:pfam05483 179 EETRQVymdlNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKD 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 870 EEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELrlkERDVEELQLKLTKA-------NENASFLQKSIEDMTVKAEQ 942
Cdd:pfam05483 259 LTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHL---TKELEDIKMSLQRSmstqkalEEDLQIATKTICQLTEEKEA 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 943 SQQEAAKKHEEEK---KELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEiLQNLQKTLLDTE---DKLKGAR 1016
Cdd:pfam05483 336 QMEELNKAKAAHSfvvTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSE-LEEMTKFKNNKEvelEELKKIL 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1017 EENSGLLQELEELRKQAD----KAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKI 1092
Cdd:pfam05483 415 AEDEKLLDEKKQFEKIAEelkgKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHC 494
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1093 ALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKyyeqehlnkealavEREKLLKEINVVQEELLKINVENDSLQaskvsm 1172
Cdd:pfam05483 495 DKLLLENKELTQEASDMTLELKKHQEDIINCKK--------------QEERMLKQIENLEEKEMNLRDELESVR------ 554
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1173 qaliEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDI---IQKLQRSYEELVKDQKAL 1239
Cdd:pfam05483 555 ----EEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLkkqIENKNKNIEELHQENKAL 620
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
352-569 |
7.87e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 7.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALA----RRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 432 EEEKRKVEDL---QFRVEEESITKGDLEVATVSEKSRIMELEKDLA-LRVQEVAELRRRLESNKpagdvdmslSLLQEIS 507
Cdd:COG4942 100 EAQKEELAELlraLYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLApARREQAEELRADLAELA---------ALRAELE 170
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1941690766 508 SLQEKLEVTRTDHQREITSLKEHFGAREET---HQKEIKALYTATEKLSKENESLKSKLEHANKE 569
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLlarLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
833-1438 |
8.05e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 47.81 E-value: 8.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 833 NKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDV 912
Cdd:pfam05557 16 NEKKQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 913 EElqlKLTKANENASFLQKSIEDMTVKAEQSQQeaakkheeekkelerKLSDLEKKMETSHNQCQELKARYERAtsetkT 992
Cdd:pfam05557 96 ES---QLADAREVISCLKNELSELRRQIQRAEL---------------ELQSTNSELEELQERLDLLKAKASEA-----E 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 993 KHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKSLTYLLtSAKKEIELMSEELRGLKSEKQLLSQEGN 1072
Cdd:pfam05557 153 QLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELARIPELE-KELERLREHNKHLNENIENKLLLKEEVE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1073 DLKlengSLLSKLVELEAKIALLQgdqqklwsvnetlnLEKEKFLEEKQDAEKYYEQEHLNkealAVEREKLLKEINVVQ 1152
Cdd:pfam05557 232 DLK----RKLEREEKYREEAATLE--------------LEKEKLEQELQSWVKLAQDTGLN----LRSPEDLSRRIEQLQ 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1153 EELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQrSYEel 1232
Cdd:pfam05557 290 QREIVLKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILE-SYD-- 366
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1233 vkdqkalvqetEDLTAEKKSA--LEKLSNLDNTCIALKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQLlr 1310
Cdd:pfam05557 367 -----------KELTMSNYSPqlLERIEEAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQESL-- 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1311 SEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEiKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSEN 1390
Cdd:pfam05557 434 ADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELER-RCLQGDYDPKKTKVLHLSMNPAAEAYQQRKNQLEKLQAE 512
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1941690766 1391 RIITEKLHKCLEEAAHTEMSLNEkityltSEKEMASQKMTELKKQQDS 1438
Cdd:pfam05557 513 IERLKRLLKKLEDDLEQVLRLPE------TTSTMNFKEVLDLRKELES 554
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
549-1075 |
8.25e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 47.71 E-value: 8.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 549 TEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMrldyQHEI 628
Cdd:TIGR04523 180 KEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNT----QTQL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 629 ENLQNQQDSE-RAAHAKEMEALRAKlmKVIKEKENSLEAIRSKLDKAEDQhlvEMEDTLNKLQ-EAEIKVKELEVLQAKC 706
Cdd:TIGR04523 256 NQLKDEQNKIkKQLSEKQKELEQNN--KKIKELEKQLNQLKSEISDLNNQ---KEQDWNKELKsELKNQEKKLEEIQNQI 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 707 NEQTKVIDNFTSQLKAteeklldldaLRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKL 786
Cdd:TIGR04523 331 SQNNKIISQLNEQISQ----------LKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKI 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 787 TNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREK 866
Cdd:TIGR04523 401 QNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKI 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 867 DEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMtvkaeqsqqe 946
Cdd:TIGR04523 481 KQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD---------- 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 947 aakkheeekkELERKLSDLEKKMETSHNQCQELKARYERATSETKTKhEEILQNLQKTLLDTEDKLKGAREENSGLLQEL 1026
Cdd:TIGR04523 551 ----------DFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEK-QELIDQKEKEKKDLIKEIEEKEKKISSLEKEL 619
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1941690766 1027 EELRKQADKAKSLTYLLTSAK----KEIELMSEELRGLKSEKQLLSQEGNDLK 1075
Cdd:TIGR04523 620 EKAKKENEKLSSIIKNIKSKKnklkQEVKQIKETIKEIRNKWPEIIKKIKESK 672
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1487-2014 |
9.06e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 47.71 E-value: 9.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1487 KLLGNIDALKKELQERKKENQelvaskcDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQ 1566
Cdd:TIGR04523 37 QLEKKLKTIKNELKNKEKELK-------NLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKIN 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1567 EEChKLSKEIQEMQQSLILEQEARAKESESSLYENN----QLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQE 1642
Cdd:TIGR04523 110 SEI-KNDKEQKNKLEVELNKLEKQKKENKKNIDKFLteikKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKN 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1643 LAEIieEKELLTAEaaQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQrnheVTLAEKAQVMQDNQ-NLLAEKS 1721
Cdd:TIGR04523 189 IDKI--KNKLLKLE--LLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQ----QEINEKTTEISNTQtQLNQLKD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1722 EMMLEKDELLKEKETLAESYFILQKEISQLAKTNSHISAnlLESQNENRTLRKDKNKLTLKIRELETLQSFTAA--QTAE 1799
Cdd:TIGR04523 261 EQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISD--LNNQKEQDWNKELKSELKNQEKKLEEIQNQISQnnKIIS 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1800 DAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKelltvenQKMEEFRKEIETLKQAAAQKS 1879
Cdd:TIGR04523 339 QLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE-------SQINDLESKIQNQEKLNQQKD 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1880 QQLSALQEENVKLAEELGRSRDEVTSHQK----LEEERSVLNNQLLEMKKRESKF---IKDADEEKASLQKSISITSALL 1952
Cdd:TIGR04523 412 EQIKKLQQEKELLEKEIERLKETIIKNNSeikdLTNQDSVKELIIKNLDNTRESLetqLKVLSRSINKIKQNLEQKQKEL 491
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1941690766 1953 TEKDAELEKLRNEVTVLRGENASAK----SLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSS 2014
Cdd:TIGR04523 492 KSKEKELKKLNEEKKELEEKVKDLTkkisSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKE 557
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1422-1972 |
9.14e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.86 E-value: 9.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1422 KEMASQKMTELKKQQDSLLKEKSSLETQNGA--------------LLAERENSIKAIGDLKRQCDQESANRSLVVQENMK 1487
Cdd:pfam01576 21 QQKAESELKELEKKHQQLCEEKNALQEQLQAetelcaeaeemrarLAARKQELEEILHELESRLEEEEERSQQLQNEKKK 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1488 LLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEknillrdgLNLQE 1567
Cdd:pfam01576 101 MQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSN--------LAEEE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1568 ECHKLSKEIQEMQQSLILEQEARAKESESSLYENNQLHGRmvlLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEII 1647
Cdd:pfam01576 173 EKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRK---LEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAAL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1648 EEKELLTAEAAQ-------LAAHIKTLKSDFAA--LSKSKAELQ------ELHSCLTKILDDL-----------QRNHEV 1701
Cdd:pfam01576 250 ARLEEETAQKNNalkkireLEAQISELQEDLESerAARNKAEKQrrdlgeELEALKTELEDTLdttaaqqelrsKREQEV 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1702 TLAEK----------AQVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLAKTNSHISANLLESQNENRT 1771
Cdd:pfam01576 330 TELKKaleeetrsheAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKK 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1772 LRKDKNKLTLKIRELEtlqsftaaQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLkENNLKNVEELNKsk 1851
Cdd:pfam01576 410 LEGQLQELQARLSESE--------RQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSL-ESQLQDTQELLQ-- 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1852 elltvenqkmEEFRKEIetlkqaaaQKSQQLSALQEENVKLAEELgrsRDEVTSHQKLEEERSVLNNQLLEMKKR---ES 1928
Cdd:pfam01576 479 ----------EETRQKL--------NLSTRLRQLEDERNSLQEQL---EEEEEAKRNVERQLSTLQAQLSDMKKKleeDA 537
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1941690766 1929 KFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGE 1972
Cdd:pfam01576 538 GTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQE 581
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1161-1385 |
1.24e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1161 ENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSYEELVKDQKALV 1240
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1241 QETEDLtAEKKSALEKLSNLDNtcIALKVERDNVLQNNRNLQLETDMLLQDQEKLNAsLQAALQVKQLLRSEASGLRAQL 1320
Cdd:COG4942 101 AQKEEL-AELLRALYRLGRQPP--LALLLSPEDFLDAVRRLQYLKYLAPARREQAEE-LRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1941690766 1321 DdasKALRKAELETVQLEAANTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEE 1385
Cdd:COG4942 177 E---ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
646-1142 |
1.52e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 646 MEALRAKLMKVIKEKENSLEAIRSKLDkaedqhlvemEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEE 725
Cdd:COG4717 40 LAFIRAMLLERLEKEADELFKPQGRKP----------ELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 726 KLLDLDAlRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKnaesskassitRELQGRELKLTNLQENLSEVSQVKETLEK 805
Cdd:COG4717 110 ELEELRE-ELEKLEKLLQLLPLYQELEALEAELAELPERL-----------EELEERLEELRELEEELEELEAELAELQE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 806 ELQILKEKFAEASEEAVsvqRSMQETVNKLHQKEEQfnmLSSDLEKLRENLADMEakfREKDEREEQLIKAKEKLENDIA 885
Cdd:COG4717 178 ELEELLEQLSLATEEEL---QDLAEELEELQQRLAE---LEEELEEAQEELEELE---EELEQLENELEAAALEERLKEA 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 886 EIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDL 965
Cdd:COG4717 249 RLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAAL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 966 EKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLkgAREENSGLLQELEELRKQADKAKSLtyllts 1045
Cdd:COG4717 329 GLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAAL--LAEAGVEDEEELRAALEQAEEYQEL------ 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1046 aKKEIELMSEELRGLKSEKQLLSQEGNDLKLEngsllSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEK 1125
Cdd:COG4717 401 -KEELEELEEQLEELLGELEELLEALDEEELE-----EELEELEEELEELEEELEELREELAELEAELEQLEEDGELAEL 474
|
490
....*....|....*..
gi 1941690766 1126 YYEQEHLNKEALAVERE 1142
Cdd:COG4717 475 LQELEELKAELRELAEE 491
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1612-1764 |
1.52e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1612 EQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQL-AAHIKTLKSDFAALSKSKAELQELHSCLTK 1690
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLERELEERERRRARLEA 366
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1941690766 1691 ILDDLQRNHEVTLAE----KAQVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLAKTNSHISANLLE 1764
Cdd:COG4913 367 LLAALGLPLPASAEEfaalRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLA 444
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2086-2103 |
1.86e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 40.14 E-value: 1.86e-04
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
731-944 |
1.89e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 731 DALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKN--AESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQ 808
Cdd:COG3206 171 EEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGlvDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLG 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 809 ILKEKFAEASEEAV--SVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAK-EKLENDIA 885
Cdd:COG3206 251 SGPDALPELLQSPViqQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAElEALQAREA 330
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1941690766 886 EIMKMSGDNSSQLTKMNDelrlKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQ 944
Cdd:COG3206 331 SLQAQLAQLEARLAELPE----LEAELRRLEREVEVARELYESLLQRLEEARLAEALTV 385
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
336-655 |
2.23e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 2.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 336 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALARDGHDQhVLELEAKMDQLRT 415
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 416 MVEAADREKVELLNQLEEEKRKVEDLQFRVEEesiTKGDLEVAtvsEKSRIMELEKDLALRVQEVAELRRRLEsnkpagd 495
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAEEELDE---LQDRLEAA---EDLARLELRALLEERFAAALGDAVERE------- 766
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 496 vdMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSK-ENESL---KSKLEHANKENS 571
Cdd:COG4913 767 --LRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRlEEDGLpeyEERFKELLNENS 844
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 572 DV-IALWKSKLETAIASHQQAMEEL-----KVSFSKG----LGTETAEFAELKtqiekmrlDYQHEI----ENLQNQQDS 637
Cdd:COG4913 845 IEfVADLLSKLRRAIREIKERIDPLndslkRIPFGPGrylrLEARPRPDPEVR--------EFRQELravtSGASLFDEE 916
|
330
....*....|....*...
gi 1941690766 638 ERAAHAKEMEALRAKLMK 655
Cdd:COG4913 917 LSEARFAALKRLIERLRS 934
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
355-814 |
2.46e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 2.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 355 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHvlELEAKMDQLRTMVEAADREKVELLNQLEEE 434
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEERLEEL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 435 KRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQEVAELRRRLEsnkpagdvdmslsllQEISSLQEKLE 514
Cdd:COG4717 159 RELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELE---------------EELEEAQEELE 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 515 VTRTDHQrEITSLKEHFGAREETHQKEIKALYTAT----EKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQ 590
Cdd:COG4717 224 ELEEELE-QLENELEAAALEERLKEARLLLLIAAAllalLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGK 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 591 AMEELKvsfskgLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENsLEAIRSK 670
Cdd:COG4717 303 EAEELQ------ALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEEL-EQEIAAL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 671 LDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKaTEEKLLDLDALRKASSEGKSEMKKLRQQ 750
Cdd:COG4717 376 LAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALD-EEELEEELEELEEELEELEEELEELREE 454
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1941690766 751 LEAAEKQIKHLEieknaESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKF 814
Cdd:COG4717 455 LAELEAELEQLE-----EDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
335-886 |
2.72e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 46.32 E-value: 2.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 335 LLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERA-------EVAKATSHVGEIEQELALARDGHDQHVLELE 407
Cdd:pfam01576 76 ILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAarqklqlEKVTTEAKIKKLEEDILLLEDQNSKLSKERK 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 408 AKMDQLRTMVE--AADREKVELLNQLEEEKRKV-EDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQEVAELR 484
Cdd:pfam01576 156 LLEERISEFTSnlAEEEEKAKSLSKLKNKHEAMiSDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 485 RRLESNKpagdvdmslsllQEISSLQEKLE---VTRTDHQREITSLKEHFGAREETHQKEIKALYTATEK---LSKENES 558
Cdd:pfam01576 236 AQLAKKE------------EELQAALARLEeetAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQrrdLGEELEA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 559 LKSKLEHANKENSDVIALwKSKLETAIASHQQAMEELKVSFSKGLG----TETAEFAELKTQIEKMRlDYQHEIENLQNQ 634
Cdd:pfam01576 304 LKTELEDTLDTTAAQQEL-RSKREQEVTELKKALEEETRSHEAQLQemrqKHTQALEELTEQLEQAK-RNKANLEKAKQA 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 635 QDSERAAHAKEMEALRAKLMKV---IKEKENSLEAIRSKLDKAEDQHlVEMEDTLNKLQ-EAEIKVKELEVLQAKCNEQT 710
Cdd:pfam01576 382 LESENAELQAELRTLQQAKQDSehkRKKLEGQLQELQARLSESERQR-AELAEKLSKLQsELESVSSLLNEAEGKNIKLS 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 711 KVIDNFTSQLKATEEKLldldalrkasSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQ 790
Cdd:pfam01576 461 KDVSSLESQLQDTQELL----------QEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMK 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 791 ENLSEVSQVKETLE---KELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmLSSDLEKLRENLADMEAKFREKD 867
Cdd:pfam01576 531 KKLEEDAGTLEALEegkKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDD---LLVDLDHQRQLVSNLEKKQKKFD 607
|
570 580
....*....|....*....|.
gi 1941690766 868 E--REEQLIKAKEKLENDIAE 886
Cdd:pfam01576 608 QmlAEEKAISARYAEERDRAE 628
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1279-2046 |
2.76e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 46.22 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1279 RNLQLETDMLLQDQEKLNaSLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKlleEIKARRAVT 1358
Cdd:COG5022 758 RYLRRRYLQALKRIKKIQ-VIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQK---TIKREKKLR 833
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1359 DSECIQLLHEKETLAAS--------ERRLLAEKEELLSENRIITEKLHKCLEEAAHTemslNEKITYLTSEKEMASQKMT 1430
Cdd:COG5022 834 ETEEVEFSLKAEVLIQKfgrslkakKRFSLLKKETIYLQSAQRVELAERQLQELKID----VKSISSLKLVNLELESEII 909
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1431 ELKKQQDSLLKEKSSLetqngallaeRENSIKAIGDLKRqcdqesaNRSLVVQENMKLlgnidalkkelqERKKENQELV 1510
Cdd:COG5022 910 ELKKSLSSDLIENLEF----------KTELIARLKKLLN-------NIDLEEGPSIEY------------VKLPELNKLH 960
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1511 ASKCDlslmLKEAQNTKKNLEKEHThilqakesldaqlntccseknILLRDGLNLQEECHKLSKEIQEMQQSLILEQEAr 1590
Cdd:COG5022 961 EVESK----LKETSEEYEDLLKKST---------------------ILVREGNKANSELKNFKKELAELSKQYGALQES- 1014
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1591 AKESESSLYENNQLHGRMVLLEQEVEELRVcIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLaAHIKTLKSD 1670
Cdd:COG5022 1015 TKQLKELPVEVAELQSASKIISSESTELSI-LKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQL-YQLESTENL 1092
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1671 FAALSKSKAELQELHSCL----TKILDDLQRNHEVTLAEKAQVMQDNQNLLAEK---SEMMLEKDELLKEKETLAESYFI 1743
Cdd:COG5022 1093 LKTINVKDLEVTNRNLVKpanvLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFqklSVLQLELDGLFWEANLEALPSPP 1172
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1744 LQKEISQLAKTNSHI-SANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEdAMQIMEQMTKEKTETlaSLEDT 1822
Cdd:COG5022 1173 PFAALSEKRLYQSALyDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKLKKLISE-GWVPTEYSTSLKGFN--NLNKK 1249
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1823 KQTNAKLQNEldtlkennlKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENV--KLAEELGRSR 1900
Cdd:COG5022 1250 FDTPASMSNE---------KLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLrwKSATEVNYNS 1320
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1901 DEVtSHQKLEEERSVLNNQLLEMKKRESKFIKDadeeKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKslh 1980
Cdd:COG5022 1321 EEL-DDWCREFEISDVDEELEELIQAVKVLQLL----KDDLNKLDELLDACYSLNPAEIQNLKSRYDPADKENNLPK--- 1392
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1941690766 1981 SVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAD-----EDERAQESQIDFLNSVIVDLQRK 2046
Cdd:COG5022 1393 EILKKIEALLIKQELQLSLEGKDETEVHLSEIFSEEKSLISLDrnsiyKEEVLSSLSALLTKEKIALLDRK 1463
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
356-529 |
3.10e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 46.00 E-value: 3.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 356 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD 421
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 422 REKVELLNQLEEEKRKVEDLQFRVEEESitkgdlevatvSEKSRIMELEKDLALRVQEVAELRRRLEsnkpagdvdmslS 501
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEAR-----------SEERREIRKDREISRLDREIERLERELE------------E 483
|
170 180 190
....*....|....*....|....*....|..
gi 1941690766 502 LLQEISSLQEKLEVTRT----DHQREITSLKE 529
Cdd:COG2433 484 ERERIEELKRKLERLKElwklEHSGELVPVKV 515
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
908-1660 |
3.23e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.12 E-value: 3.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 908 KERDVEELQLKLTKAN----ENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARY 983
Cdd:TIGR00618 124 KKSETEEVIHDLLKLDyktfTRVVLLPQGEFAQFLKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRS 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 984 E---RATSETKTKHEEILQNLQKTLLDTEDKLKGAR-------------EENSGLLQELEELRKQADKAKSLTYLLTSAK 1047
Cdd:TIGR00618 204 QlltLCTPCMPDTYHERKQVLEKELKHLREALQQTQqshayltqkreaqEEQLKKQQLLKQLRARIEELRAQEAVLEETQ 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1048 KEIELMSEELRgLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEKYY 1127
Cdd:TIGR00618 284 ERINRARKAAP-LAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHE 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1128 EQ----EHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQ 1203
Cdd:TIGR00618 363 VAtsirEISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAEL 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1204 IKKLITENFILAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIALKverdnvlqnNRNLQL 1283
Cdd:TIGR00618 443 CAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLC---------GSCIHP 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1284 ETDMLLQDQEKLNAS-LQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIKARRAVTDSEC 1362
Cdd:TIGR00618 514 NPARQDIDNPGPLTRrMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNIT 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1363 IQLLHEKETLAASERRLLAEKEELLSEnriiteklhkcLEEAAHtemsLNEKITYLTSEKEMASQKMTELKKQQDSLLKE 1442
Cdd:TIGR00618 594 VRLQDLTEKLSEAEDMLACEQHALLRK-----------LQPEQD----LQDVRLHLQQCSQELALKLTALHALQLTLTQE 658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1443 K-----SSLETQNGALLAERENSIKAIGDLKRQCdqeSANRSLVVQENMKLLGNIDALKKELQERKKENQELVASKCDLS 1517
Cdd:TIGR00618 659 RvrehaLSIRVLPKELLASRQLALQKMQSEKEQL---TYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLA 735
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1518 LMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKEIQEMQQSL-ILEQEARAKESES 1596
Cdd:TIGR00618 736 AREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLkTLEAEIGQEIPSD 815
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1941690766 1597 SLYENNQLHgrmvLLEQEVEELRVCIEELQSekfvLLQEKSKSEQELAEIIEEKELLTAEAAQL 1660
Cdd:TIGR00618 816 EDILNLQCE----TLVQEEEQFLSRLEEKSA----TLGEITHQLLKYEECSKQLAQLTQEQAKI 871
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
744-1242 |
3.73e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.53 E-value: 3.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 744 MKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFaeaseEAVS 823
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEL-----EKLE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 824 VQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEndiAEIMKMSGDNSSQLTKMND 903
Cdd:COG4717 123 KLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELE---ELLEQLSLATEEELQDLAE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 904 ELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEqsqqeaakkheeekkelerklsdlekkmetSHNQCQELKARY 983
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELE------------------------------AAALEERLKEAR 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 984 ERATSETKTkheEILQNLQKTLLDTEDKLKGAREENSGLLQ-ELEELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKS 1062
Cdd:COG4717 250 LLLLIAAAL---LALLGLGGSLLSLILTIAGVLFLVLGLLAlLFLLLAREKASLGKEAEELQALPALEELEEEELEELLA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1063 EKQLLSQEGNDLKLENGSLLSKLVELEAKIAllQGDQQKLWSVNETlnlEKEKFLEEKQ--DAEKYYEqehlnKEALAVE 1140
Cdd:COG4717 327 ALGLPPDLSPEELLELLDRIEELQELLREAE--ELEEELQLEELEQ---EIAALLAEAGveDEEELRA-----ALEQAEE 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1141 REKLLKEINVVQEELLKIN--VENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLitenfilakDK 1218
Cdd:COG4717 397 YQELKEELEELEEQLEELLgeLEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQL---------EE 467
|
490 500
....*....|....*....|....
gi 1941690766 1219 DDIIQKLQRSYEELVKDQKALVQE 1242
Cdd:COG4717 468 DGELAELLQELEELKAELRELAEE 491
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1195-1449 |
3.82e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 3.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1195 EEKDhLEDQIKKLItENFilakdkddiiQKLQRSYEELVK--DQKALVQETEDLTAEKKSALEKLSNLDNTCIALKVERD 1272
Cdd:COG4913 219 EEPD-TFEAADALV-EHF----------DDLERAHEALEDarEQIELLEPIRELAERYAAARERLAELEYLRAALRLWFA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1273 nvlqnnrnlQLETDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETV-QLEAANTSLTKLLEEI 1351
Cdd:COG4913 287 ---------QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLeQLEREIERLERELEER 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1352 KARRAVTDSECIQLlheKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAhtemslnekityltsekeMASQKMTE 1431
Cdd:COG4913 358 ERRRARLEALLAAL---GLPLPASAEEFAALRAEAAALLEALEEELEALEEALA------------------EAEAALRD 416
|
250
....*....|....*...
gi 1941690766 1432 LKKQQDSLLKEKSSLETQ 1449
Cdd:COG4913 417 LRRELRELEAEIASLERR 434
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1039-1258 |
3.95e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1039 LTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLE 1118
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1119 EKQDAEKYYE--QEHLNKEALAVEREKLLKEINVV--QEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKDQ 1194
Cdd:COG4942 91 EIAELRAELEaqKEELAELLRALYRLGRQPPLALLlsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1195 EEKDHLEDQIKKLITENFILA---KDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLS 1258
Cdd:COG4942 171 AERAELEALLAELEEERAALEalkAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1173-1844 |
4.11e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.60 E-value: 4.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1173 QALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKS 1252
Cdd:pfam12128 300 KEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNR 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1253 ALEKLSNLDNTCIA-LKVERDNVLQNNRNLQLETDMLLQDQE-----KLNASLQAALQVKQLLRSEASGLRAQLDDASka 1326
Cdd:pfam12128 380 RRSKIKEQNNRDIAgIKDKLAKIREARDRQLAVAEDDLQALEselreQLEAGKLEFNEEEYRLKSRLGELKLRLNQAT-- 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1327 lrkAELETV-QLEAANTSLTKLLEEIKARRAvtdseciqllhEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAA 1405
Cdd:pfam12128 458 ---ATPELLlQLENFDERIERAREEQEAANA-----------EVERLQSELRQARKRRDQASEALRQASRRLEERQSALD 523
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1406 HTEMSLNEK----ITYLTSEKEMASQkmtELKKQQDSLLKEKSSLETQNGALLAERENSIKAIG-DLKRQCDQESAnrsl 1480
Cdd:pfam12128 524 ELELQLFPQagtlLHFLRKEAPDWEQ---SIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKlDLKRIDVPEWA---- 596
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1481 vvQENMKLLGNIDALKKELQERKKENQELvasKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKnillr 1560
Cdd:pfam12128 597 --ASEEELRERLDKAEEALQSAREKQAAA---EEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEK----- 666
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1561 DGLNLQEECHKLSKEiQEMQQsliLEQEARAKEsesslyennqlHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSE 1640
Cdd:pfam12128 667 DKKNKALAERKDSAN-ERLNS---LEAQLKQLD-----------KKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQL 731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1641 QELAEIIEekelltAEAAQLAAHIKTLKSDFA-----------ALSKSKAELQELHsclTKILDDLQRNHEVTLAE---K 1706
Cdd:pfam12128 732 ALLKAAIA------ARRSGAKAELKALETWYKrdlaslgvdpdVIAKLKREIRTLE---RKIERIAVRRQEVLRYFdwyQ 802
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1707 AQVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEIsqlaKTNSHISANLLESQNENRTLRKDknkltlkirEL 1786
Cdd:pfam12128 803 ETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKL----EMERKASEKQQVRLSENLRGLRC---------EM 869
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 1941690766 1787 ETLQSFTAAQTAedamqimEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEnNLKNV 1844
Cdd:pfam12128 870 SKLATLKEDANS-------EQAQGSIGERLAQLEDLKLKRDYLSESVKKYVE-HFKNV 919
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1634-1876 |
4.46e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 4.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1634 QEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDN 1713
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1714 QNLLAEKSEMMlekDELLKEKETLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQsft 1793
Cdd:COG4942 100 EAQKEELAELL---RALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER--- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1794 aaqtaedamQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQ 1873
Cdd:COG4942 174 ---------AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
...
gi 1941690766 1874 AAA 1876
Cdd:COG4942 245 AAG 247
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
745-906 |
4.80e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.15 E-value: 4.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 745 KKLRQQLEAAEKQIKHL--EIEKNAESSKassitrelqgrELKLTNLQEnlsEVSQVKETLEKELqilKEKFAEaseeav 822
Cdd:PRK12704 27 KIAEAKIKEAEEEAKRIleEAKKEAEAIK-----------KEALLEAKE---EIHKLRNEFEKEL---RERRNE------ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 823 svqrsMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREK----DEREEQLIKAKEKLENDIAEIMKMSGDNSSQ- 897
Cdd:PRK12704 84 -----LQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKqqelEKKEEELEELIEEQLQELERISGLTAEEAKEi 158
|
170
....*....|
gi 1941690766 898 -LTKMNDELR 906
Cdd:PRK12704 159 lLEKVEEEAR 168
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
401-1060 |
5.14e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 5.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 401 QHVLELEAKMDQLRTMVEAADrEKVELLNQLEEEKRKVEDLQfrveeesitkgdlevatvseksRIMELEKDLALRVQEV 480
Cdd:COG4913 215 EYMLEEPDTFEAADALVEHFD-DLERAHEALEDAREQIELLE----------------------PIRELAERYAAARERL 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 481 AELRRRLESNKPAGDVDMSLSLLQEISSLQEKLEvtrtDHQREITSLKehfgAREETHQKEIKALYTATEKLSKEN-ESL 559
Cdd:COG4913 272 AELEYLRAALRLWFAQRRLELLEAELEELRAELA----RLEAELERLE----ARLDALREELDELEAQIRGNGGDRlEQL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 560 KSKLEHANKEnsdvialwKSKLETAIASHQQAMEELKVSfskgLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSER 639
Cdd:COG4913 344 EREIERLERE--------LEERERRRARLEALLAALGLP----LPASAEEFAALRAEAAALLEALEEELEALEEALAEAE 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 640 AAHAKEMEALRAklmkviKEKE-NSLEAIRSKLdkaeDQHLVEMEDTLNklQEAEIKVKEL----EVLQAKCNEQ----- 709
Cdd:COG4913 412 AALRDLRRELRE------LEAEiASLERRKSNI----PARLLALRDALA--EALGLDEAELpfvgELIEVRPEEErwrga 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 710 ----------------------TKVIDN--FTSQLKATEEKLLDLDALRKASSEG-----------------KSEMKKLR 748
Cdd:COG4913 480 iervlggfaltllvppehyaaaLRWVNRlhLRGRLVYERVRTGLPDPERPRLDPDslagkldfkphpfrawlEAELGRRF 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 749 --------QQLEAAEK------QIKHLEI--EKNAESSKAS------SITRELQGRELKLTNLQENLSEVSQVKETLEKE 806
Cdd:COG4913 560 dyvcvdspEELRRHPRaitragQVKGNGTrhEKDDRRRIRSryvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAE 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 807 LQILKEKFAEAS--EEAVSVQRSMQETVNKLHQKEEQFNML---SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLE 881
Cdd:COG4913 640 LDALQERREALQrlAEYSWDEIDVASAEREIAELEAELERLdasSDDLAALEEQLEELEAELEELEEELDELKGEIGRLE 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 882 NDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQeaakkheeekkeleRK 961
Cdd:COG4913 720 KELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLN--------------RA 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 962 LSDLEKKMETsHNQCQELKARYERATSETKTKHEEILQNLQKT-LLDTEDKLKGAREENSGllQELEELRKQADKAKSlt 1040
Cdd:COG4913 786 EEELERAMRA-FNREWPAETADLDADLESLPEYLALLDRLEEDgLPEYEERFKELLNENSI--EFVADLLSKLRRAIR-- 860
|
730 740
....*....|....*....|
gi 1941690766 1041 ylltSAKKEIELMSEELRGL 1060
Cdd:COG4913 861 ----EIKERIDPLNDSLKRI 876
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
789-1112 |
5.45e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.51 E-value: 5.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 789 LQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDE 868
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 869 REEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAA 948
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 949 KKHEEEKKELERKLSDLEKKMEtshnqcQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEE 1028
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIE------SLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEE 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1029 LRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNET 1108
Cdd:COG4372 263 LELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADL 342
|
....
gi 1941690766 1109 LNLE 1112
Cdd:COG4372 343 LQLL 346
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1622-1838 |
5.63e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 5.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1622 IEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEV 1701
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1702 TLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLAKTnshISANLLESQNENRTLRKDKNKLTL 1781
Cdd:COG4942 102 QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEE---LRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1782 KIRELETLQSFTAAQTAEDAmQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKE 1838
Cdd:COG4942 179 LLAELEEERAALEALKAERQ-KLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1144-1669 |
5.74e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.03 E-value: 5.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1144 LLKEINVVQEELLKINVENDSLQASKVSMQALIEElqlskdtliakTEKDQEEKDHLEDQIKKL---ITENFILAKDKDD 1220
Cdd:PRK02224 211 LESELAELDEEIERYEEQREQARETRDEADEVLEE-----------HEERREELETLEAEIEDLretIAETEREREELAE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1221 IIQKLQRSYEELVK--------------DQKALVQETEDLTAEKKSALEKLSNLDNTCIALKVERDNVLQNNRNLQLETD 1286
Cdd:PRK02224 280 EVRDLRERLEELEEerddllaeaglddaDAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1287 MLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIKARRAVTDSEciqlL 1366
Cdd:PRK02224 360 ELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEAT----L 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1367 HEKETLAASERRLLAEKE--------------ELLSENRIITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMASQKMTel 1432
Cdd:PRK02224 436 RTARERVEEAEALLEAGKcpecgqpvegsphvETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIER-- 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1433 kkqqdslLKEKSSLETQngaLLAERENSIKAigdlkrqcDQESAnrslvvqenmkllgniDALKKELQERKKENQELVAS 1512
Cdd:PRK02224 514 -------LEERREDLEE---LIAERRETIEE--------KRERA----------------EELRERAAELEAEAEEKREA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1513 KCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAqlntccseknilLRDGLNLQEECHKLSKEIQEMQQSLIlEQEARAK 1592
Cdd:PRK02224 560 AAEAEEEAEEAREEVAELNSKLAELKERIESLER------------IRTLLAAIADAEDEIERLREKREALA-ELNDERR 626
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1593 ESESSLYEnnqlhgRMVLLEQEVEELRvcIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKS 1669
Cdd:PRK02224 627 ERLAEKRE------RKRELEAEFDEAR--IEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEE 695
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1425-1742 |
6.12e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.28 E-value: 6.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1425 ASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVvqeNMKLLGNIDALKKELQERKK 1504
Cdd:PLN02939 44 SQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRA---SMQRDEAIAAIDNEQQTNSK 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1505 ENQELvaSKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLntccSEKNILLRD----GLNLQEECHKLSKEIQEMQ 1580
Cdd:PLN02939 121 DGEQL--SDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKIL----TEKEALQGKinilEMRLSETDARIKLAAQEKI 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1581 QSLILEQEAR------AKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEkfvlLQEKSKSEQELAEIIEEKELLT 1654
Cdd:PLN02939 195 HVEILEEQLEklrnelLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAE----LIEVAETEERVFKLEKERSLLD 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1655 AEAAQLAAHIKTLKSDFAALSKSKAE--------LQELHSCLTKILDD----LQRNHEvtLAEKAQVMQDNqnlLAEK-- 1720
Cdd:PLN02939 271 ASLRELESKFIVAQEDVSKLSPLQYDcwwekvenLQDLLDRATNQVEKaalvLDQNQD--LRDKVDKLEAS---LKEAnv 345
|
330 340
....*....|....*....|..
gi 1941690766 1721 SEMMLEKDELLKEKETLAESYF 1742
Cdd:PLN02939 346 SKFSSYKVELLQQKLKLLEERL 367
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
977-1842 |
7.92e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 44.65 E-value: 7.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 977 QELKARYERATSETKTKHEEILQNLQKT--LLDTEDKLKGAREENSGLLQELEELRKQA-----DKAKSLTYLLTSAKKE 1049
Cdd:TIGR00606 237 REIVKSYENELDPLKNRLKEIEHNLSKImkLDNEIKALKSRKKQMEKDNSELELKMEKVfqgtdEQLNDLYHNHQRTVRE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1050 IEL----MSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAEK 1125
Cdd:TIGR00606 317 KERelvdCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFH 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1126 YYEQEHLNKEALAVER--EKLLKEINVVQEELLKINVE----NDSLQASKVSMQALIEELQLSKDTLIAKT-------EK 1192
Cdd:TIGR00606 397 TLVIERQEDEAKTAAQlcADLQSKERLKQEQADEIRDEkkglGRTIELKKEILEKKQEELKFVIKELQQLEgssdrilEL 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1193 DQEEKDHLED--------QIKKLITENFILAKDKDDIIQKLQRSYEELVK--DQKALVQETEDLTAEKKSALEKLSNLDN 1262
Cdd:TIGR00606 477 DQELRKAERElskaeknsLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQlnHHTTTRTQMEMLTKDKMDKDEQIRKIKS 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1263 TCIALKVERDNVLQNNRNLQ-------LETDMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALrkaeLETV 1335
Cdd:TIGR00606 557 RHSDELTSLLGYFPNKKQLEdwlhsksKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKL----FDVC 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1336 QLEAANTSLTKLLEEIKARRavtdseciqllHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEeaahTEMSLNEKI 1415
Cdd:TIGR00606 633 GSQDEESDLERLKEEIEKSS-----------KQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQ----TEAELQEFI 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1416 TYLTSEKEMASQKMTELKKQQDSLLKEKSSLetqngALLAERENSIkaigdlkrqcdqesanrslvvqenmkllgnIDAL 1495
Cdd:TIGR00606 698 SDLQSKLRLAPDKLKSTESELKKKEKRRDEM-----LGLAPGRQSI------------------------------IDLK 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1496 KKELQERKKENQELVaskcdlslmlKEAQNTKKNLEKEHTHI--LQAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLS 1573
Cdd:TIGR00606 743 EKEIPELRNKLQKVN----------RDIQRLKNDIEEQETLLgtIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 812
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1574 KEIQEMQQSLILEQEARAKESESSLYENnqlhgrmvlLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELL 1653
Cdd:TIGR00606 813 AKLQGSDLDRTVQQVNQEKQEKQHELDT---------VVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRR 883
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1654 TAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTkilDDLQRNHEVTLA--EKAQVMQDNQNLLAEKSEMMLEKDELL 1731
Cdd:TIGR00606 884 QQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLE---KDQQEKEELISSkeTSNKKAQDKVNDIKEKVKNIHGYMKDI 960
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1732 KEKETLAESYFILQKEiSQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKE 1811
Cdd:TIGR00606 961 ENKIQDGKDDYLKQKE-TELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQ 1039
|
890 900 910
....*....|....*....|....*....|...
gi 1941690766 1812 KTETLASLEDTKQTNA--KLQNELDTLKENNLK 1842
Cdd:TIGR00606 1040 HLKEMGQMQVLQMKQEhqKLEENIDLIKRNHVL 1072
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1015-1354 |
8.44e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 44.51 E-value: 8.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1015 AREENSGLLQELEELRKQADKAKSL-TYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIa 1093
Cdd:PLN02939 37 ARRRGFSSQQKKKRGKNIAPKQRSSnSKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQ- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1094 llqgdQQKLWSVNETLNLEKEKFLEEKQDAEK---------YYEQEHLNKeaLAVEREKLLKEINVVQEELLKINVENDS 1164
Cdd:PLN02939 116 -----QTNSKDGEQLSDFQLEDLVGMIQNAEKnilllnqarLQALEDLEK--ILTEKEALQGKINILEMRLSETDARIKL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1165 LQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLITENFILakdKDDI---------IQKLQRSYEELVKD 1235
Cdd:PLN02939 189 AAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLL---KDDIqflkaelieVAETEERVFKLEKE 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1236 Q---KALVQETEDLTAEKKSALEKLSNLDNTCIALKVERDNVLQNNRNLQLETDMLLQDQ--------EKLNASLQAA-- 1302
Cdd:PLN02939 266 RsllDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEKAALVLDQnqdlrdkvDKLEASLKEAnv 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1303 ----LQVKQLLRSEASGLRAQLDDAS-KALRKAELETVQLEAANTSLTKLLEEIKAR 1354
Cdd:PLN02939 346 skfsSYKVELLQQKLKLLEERLQASDhEIHSYIQLYQESIKEFQDTLSKLKEESKKR 402
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1572-1752 |
8.48e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.56 E-value: 8.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1572 LSKEIQEMQQSLILEQEArakesESSLYENNQLHGRMVLLEQEVEELRvciEELqsekfvllqeksksEQELAEIIEEKE 1651
Cdd:PRK04863 518 LRMRLSELEQRLRQQQRA-----ERLLAEFCKRLGKNLDDEDELEQLQ---EEL--------------EARLESLSESVS 575
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1652 LLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKilddLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELL 1731
Cdd:PRK04863 576 EARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALAR----LREQSGEEFEDSQDVTEYMQQLLERERELTVERDELA 651
|
170 180
....*....|....*....|.
gi 1941690766 1732 KEKETlaesyfiLQKEISQLA 1752
Cdd:PRK04863 652 ARKQA-------LDEEIERLS 665
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1187-1933 |
9.06e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 44.65 E-value: 9.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1187 IAKTEKDQEEKDHLEDQIKKLITENFILAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIA 1266
Cdd:TIGR00606 194 VRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKA 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1267 LKVERDNVLQNNRNLQLETDMLLQ-DQEKLNASLQAALQVKQLLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLT 1345
Cdd:TIGR00606 274 LKSRKKQMEKDNSELELKMEKVFQgTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQ 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1346 KLLEEIKARRAVTDSEcIQLLHEKETLAASERRLLAEKEEllseNRIITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMA 1425
Cdd:TIGR00606 354 LQADRHQEHIRARDSL-IQSLATRLELDGFERGPFSERQI----KNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQA 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1426 SQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESA-NRSLVVQENMKLLGNIDALKKELQERKK 1504
Cdd:TIGR00606 429 DEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQElRKAERELSKAEKNSLTETLKKEVKSLQN 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1505 ENQELVASKCDLSLMLKEaQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLN-------LQEECHKLSKEIQ 1577
Cdd:TIGR00606 509 EKADLDRKLRKLDQEMEQ-LNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGyfpnkkqLEDWLHSKSKEIN 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1578 EMQQSLILEQEARAKESESSLYENNQLHGRMVLLEQEVEEL-RVC-IEELQSEKFVLLQEKSKSEQELAEIIEEKELLTA 1655
Cdd:TIGR00606 588 QTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLfDVCgSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQ 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1656 EAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQVMQDNQNLLAEKSEMMLEKDELLKEKE 1735
Cdd:TIGR00606 668 FITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIP 747
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1736 TLAESYFILQKEISQLaKTNSHISANLLESQNENRTLRKDknkLTLKIRELETLQSFTAAQTAEDAMQIMEQMTKEKTET 1815
Cdd:TIGR00606 748 ELRNKLQKVNRDIQRL-KNDIEEQETLLGTIMPEEESAKV---CLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDRT 823
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1816 LASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEE 1895
Cdd:TIGR00606 824 VQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIRE 903
|
730 740 750
....*....|....*....|....*....|....*...
gi 1941690766 1896 LGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKD 1933
Cdd:TIGR00606 904 IKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQD 941
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
460-837 |
1.03e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.56 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 460 VSEKSRIMELEKDLAlrvqEVAELRRRLESnkpagDVDMS---LSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREE 536
Cdd:COG3096 302 AEEQYRLVEMARELE----ELSARESDLEQ-----DYQAAsdhLNLVQTALRQQEKIERYQEDLEELTERLEEQEEVVEE 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 537 TH--QKEIKALYTATEKlskENESLKSKLehankensdviALWKSKLET----AIASHQ--QAMEELKVSFskGLGTETA 608
Cdd:COG3096 373 AAeqLAEAEARLEAAEE---EVDSLKSQL-----------ADYQQALDVqqtrAIQYQQavQALEKARALC--GLPDLTP 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 609 EFAELKTQIEKMRLDYQHEiENLQNQQ-----DSERAAHAKEMEALRAKLMKVikEKENSLEAIRSKLDKAEDQ------ 677
Cdd:COG3096 437 ENAEDYLAAFRAKEQQATE-EVLELEQklsvaDAARRQFEKAYELVCKIAGEV--ERSQAWQTARELLRRYRSQqalaqr 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 678 ------HLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLkatEEKLLDLDALRKASSEGKSEMkklRQQL 751
Cdd:COG3096 514 lqqlraQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAEL---EAQLEELEEQAAEAVEQRSEL---RQQL 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 752 EAAEKQIKHLEIEKNA--ESSKASSITRELQGRELkltnlqENLSEVSQVKETL---EKELQILKEKFAEAseeavsvQR 826
Cdd:COG3096 588 EQLRARIKELAARAPAwlAAQDALERLREQSGEAL------ADSQEVTAAMQQLlerEREATVERDELAAR-------KQ 654
|
410
....*....|.
gi 1941690766 827 SMQETVNKLHQ 837
Cdd:COG3096 655 ALESQIERLSQ 665
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1485-1926 |
1.09e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.99 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1485 NMKLLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHI---------LQAKESLDAQLNTCCSEK 1555
Cdd:COG4717 69 NLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLekllqllplYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1556 NIL---LRDGLNLQEECHKLSKEIQEMQQSLILEQE----ARAKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSE 1628
Cdd:COG4717 149 EELeerLEELRELEEELEELEAELAELQEELEELLEqlslATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1629 KFVLlqEKSKSEQELAEIIEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQ 1708
Cdd:COG4717 229 LEQL--ENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1709 VMQDNQNLLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLaktnshisanllesQNENRTLRKDKNKLTLKIRELET 1788
Cdd:COG4717 307 LQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEEL--------------QELLREAEELEEELQLEELEQEI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1789 LQSFTAAQTAEDamqimeqmtkektETLASLEDTKQTNAKLQNELDTLKEnnlkNVEELNKSKELLTVENQKmEEFRKEI 1868
Cdd:COG4717 373 AALLAEAGVEDE-------------EELRAALEQAEEYQELKEELEELEE----QLEELLGELEELLEALDE-EELEEEL 434
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1941690766 1869 ETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEvTSHQKLEEERSVLNNQLLEMKKR 1926
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEED-GELAELLQELEELKAELRELAEE 491
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
714-1575 |
1.13e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 714 DNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL 793
Cdd:PTZ00121 1078 DFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIA 1157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 794 SEVSQVKEtLEKELQILKEKFAEASEEAVSVQRSMQetvnkLHQKEEqfnMLSSDLEKLRENLADMEAKFREKDEREEQL 873
Cdd:PTZ00121 1158 RKAEDARK-AEEARKAEDAKKAEAARKAEEVRKAEE-----LRKAED---ARKAEAARKAEEERKAEEARKAEDAKKAEA 1228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 874 IKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEE 953
Cdd:PTZ00121 1229 VKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAK 1308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 954 EKKELERKLSDLEKKMETSHNQCQELKARYERA--TSETKTKHEEilqnlqktllDTEDKLKGAREENSGLLQELEELRK 1031
Cdd:PTZ00121 1309 KKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAkkAAEAAKAEAE----------AAADEAEAAEEKAEAAEKKKEEAKK 1378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1032 QADKAKSltylltsaKKEIELMSEELRGLKSEKQllsqegndlklengsllSKLVELEAKIAllqgdqqklwsvnetlnl 1111
Cdd:PTZ00121 1379 KADAAKK--------KAEEKKKADEAKKKAEEDK-----------------KKADELKKAAA------------------ 1415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1112 EKEKFLEEKQDAEKYYEQEHLNKEAlavEREKLLKEINVVQEELLKI-NVENDSLQASKVSMQALIEELQLSKDTLIAKT 1190
Cdd:PTZ00121 1416 AKKKADEAKKKAEEKKKADEAKKKA---EEAKKADEAKKKAEEAKKAeEAKKKAEEAKKADEAKKKAEEAKKADEAKKKA 1492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1191 EKDQEEKDHLEDQIKklitenfilAKDKDDIIQKLQ--RSYEELVKDQKALVQETEDLTAEKKSAleklsnldntcialk 1268
Cdd:PTZ00121 1493 EEAKKKADEAKKAAE---------AKKKADEAKKAEeaKKADEAKKAEEAKKADEAKKAEEKKKA--------------- 1548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1269 verdnvlqnnrnlqletdmllqDQEKLNASLQAALQVKQllrseASGLRAQLDDASKALRKAELETVQLEAANTSLTKLL 1348
Cdd:PTZ00121 1549 ----------------------DELKKAEELKKAEEKKK-----AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLY 1601
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1349 EEIKARRAvtdseciqllheKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMASQK 1428
Cdd:PTZ00121 1602 EEEKKMKA------------EEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKK 1669
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1429 MTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKenqe 1508
Cdd:PTZ00121 1670 AEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKK---- 1745
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1509 lvaskcdlslmlkeAQNTKKNlEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKE 1575
Cdd:PTZ00121 1746 --------------AEEAKKD-EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVD 1797
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1838-2084 |
1.14e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 44.18 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1838 ENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAA----AQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEER 1913
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKlgenAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKAT 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1914 SVLNNQLLEMKKrESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS---LHSVVQTLESDK 1990
Cdd:COG5185 312 ESLEEQLAAAEA-EQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVELSKSseeLDSFKDTIESTK 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1991 VKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERaqesQIDFLNSVIVDLQRKNQDL-KMKVEMMSEAALNGNGDDL 2069
Cdd:COG5185 391 ESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQR----QIEQATSSNEEVSKLLNELiSELNKVMREADEESQSRLE 466
|
250
....*....|....*
gi 1941690766 2070 NNYDSDDQEKQSKKK 2084
Cdd:COG5185 467 EAYDEINRSVRSKKE 481
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
335-812 |
1.15e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.94 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 335 LLTETSSRYARKISGTTALQ-EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQL 413
Cdd:pfam05483 261 FLLEESRDKANQLEEKTKLQdENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEEL 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 414 rtmvEAADREKVELLNQLEEEKRKVEDLqFRVEEESITKGD--LEVATVSEKSRIMELEKDLALRVQEVAELRrrlESNK 491
Cdd:pfam05483 341 ----NKAKAAHSFVVTEFEATTCSLEEL-LRTEQQRLEKNEdqLKIITMELQKKSSELEEMTKFKNNKEVELE---ELKK 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 492 PAGDVDMSLSLLQEISSLQEKLEVTrtdhQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENS 571
Cdd:pfam05483 413 ILAEDEKLLDEKKQFEKIAEELKGK----EQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNI 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 572 DVIAlwkskletaiASHQQAMEelkvsfSKGLGTETAEFA-ELKTQIEKMRLDYQHEIENLQNQQDSERaahaKEMEaLR 650
Cdd:pfam05483 489 ELTA----------HCDKLLLE------NKELTQEASDMTlELKKHQEDIINCKKQEERMLKQIENLEE----KEMN-LR 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 651 AKLMKVIKEKENSLEAIRSKLDKAEdqhlvemEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNftsQLKATEEKLLDL 730
Cdd:pfam05483 548 DELESVREEFIQKGDEVKCKLDKSE-------ENARSIEYEVLKKEKQMKILENKCNNLKKQIEN---KNKNIEELHQEN 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 731 DALRKASSEGKsemkklrQQLEAAEKQIKHLEIEKNAESSKASSITRELQGR-ELKLTNLQENLSEVSQVKETLEKELQI 809
Cdd:pfam05483 618 KALKKKGSAEN-------KQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEiEDKKISEEKLLEEVEKAKAIADEAVKL 690
|
...
gi 1941690766 810 LKE 812
Cdd:pfam05483 691 QKE 693
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
612-851 |
1.29e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.85 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 612 ELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALrAKLMKVIKEKENSLEAIRSKLDKAEDQ---HLVEMEDT--- 685
Cdd:PHA02562 178 ELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENI-ARKQNKYDELVEEAKTIKAEIEELTDEllnLVMDIEDPsaa 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 686 LNKLQEAEIKVK-ELEVLQ--AKCNEQTKVIDNFTSQLKATEEKLldldalrkasSEGKSEMKKLRQQLEAAEKQIKHLE 762
Cdd:PHA02562 257 LNKLNTAAAKIKsKIEQFQkvIKMYEKGGVCPTCTQQISEGPDRI----------TKIKDKLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 763 iEKNAESSKASSITRELQGrelKLTNLQENLS-EVSQVKEtLEKELQILKEKFAEASEEAVSVQRSMQETVNKL--HQKE 839
Cdd:PHA02562 327 -EIMDEFNEQSKKLLELKN---KISTNKQSLItLVDKAKK-VKAAIEELQAEFVDNAEELAKLQDELDKIVKTKseLVKE 401
|
250
....*....|..
gi 1941690766 840 EQFNMLSSDLEK 851
Cdd:PHA02562 402 KYHRGIVTDLLK 413
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
801-919 |
1.40e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.69 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 801 ETLEKELQILKEKfaEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDER----EEQLIKA 876
Cdd:COG2433 376 LSIEEALEELIEK--ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierlERELSEA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1941690766 877 KEKLENDI---AEIMKMSGDNsSQLTKmndELRLKERDVEELQLKL 919
Cdd:COG2433 454 RSEERREIrkdREISRLDREI-ERLER---ELEEERERIEELKRKL 495
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
1407-1509 |
1.44e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 41.92 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1407 TEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKrqcdQESANRSLVVQENM 1486
Cdd:TIGR04211 60 DTPSARERLPELQQELAELQEELAELQEQLAELRQENQELKQQLSTLEAELEELQKELERIK----QISANAIELDEENR 135
|
90 100
....*....|....*....|...
gi 1941690766 1487 KLLGNIDALKKELQERKKENQEL 1509
Cdd:TIGR04211 136 ELREELAELKQENEALEAENERL 158
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1168-1453 |
1.48e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 43.75 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1168 SKVSMQALIEELQLSKDTliakTEKDQEEKDHLE------DQIKKLitenfilAKDKDDIIQKLQRSYEELVKDQKALVQ 1241
Cdd:PRK11281 37 TEADVQAQLDALNKQKLL----EAEDKLVQQDLEqtlallDKIDRQ-------KEETEQLKQQLAQAPAKLRQAQAELEA 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1242 ETEDLTAEKKSALEKLS------NLDNTCIALKVERDNVLQNNRNL-----QLEtdmllQDQEKLNASLQAALQVKQLLR 1310
Cdd:PRK11281 106 LKDDNDEETRETLSTLSlrqlesRLAQTLDQLQNAQNDLAEYNSQLvslqtQPE-----RAQAALYANSQRLQQIRNLLK 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1311 SEASGlRAQLDDASKALRKAELETV--------QLEAANTSLTKLLEeikARRAVTdSECIQLL-HEKETL--AASERRL 1379
Cdd:PRK11281 181 GGKVG-GKALRPSQRVLLQAEQALLnaqndlqrKSLEGNTQLQDLLQ---KQRDYL-TARIQRLeHQLQLLqeAINSKRL 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1380 -LAEK--EELLS---ENRIITEKLhkcleeaAHTEMSLNEKIT-YL---TSEKEMASQKMTELKKQQDSLLKEKSSLETQ 1449
Cdd:PRK11281 256 tLSEKtvQEAQSqdeAARIQANPL-------VAQELEINLQLSqRLlkaTEKLNTLTQQNLRVKNWLDRLTQSERNIKEQ 328
|
....
gi 1941690766 1450 NGAL 1453
Cdd:PRK11281 329 ISVL 332
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1776-1992 |
1.79e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1776 KNKLTLKIRELEtlqsFTAAQTAEDAMQIMEQMTKE-----KTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1850
Cdd:PRK12704 26 KKIAEAKIKEAE----EEAKRILEEAKKEAEAIKKEalleaKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRK 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1851 KELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL-GRSRDEVTshqkleeersvlnNQLLEMKKRESK 1929
Cdd:PRK12704 102 LELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERIsGLTAEEAK-------------EILLEKVEEEAR 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1930 fikdadEEKASLQKSIsitsalltEKDAELE--KLRNEVTVL-----RGENASAKSLhSVVqTLESDKVK 1992
Cdd:PRK12704 169 ------HEAAVLIKEI--------EEEAKEEadKKAKEILAQaiqrcAADHVAETTV-SVV-NLPNDEMK 222
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1028-1684 |
1.82e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 43.47 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1028 ELRKQADKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNE 1107
Cdd:TIGR04523 34 EEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIK 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1108 TLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKLLKEINvvqeellKINVENDSLqaskvsmQALIEELQLSKDTLI 1187
Cdd:TIGR04523 114 NDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELE-------KLNNKYNDL-------KKQKEELENELNLLE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1188 AKTEKDQEEKDHLEDQIKKLITENFILaKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIAL 1267
Cdd:TIGR04523 180 KEKLNIQKNIDKIKNKLLKLELLLSNL-KKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1268 KVERDNV---LQNNRNLQLETDMLLQDQEKLNASLQAALQV--KQLLRSEASGLRAQLDDASKALRKAELETVQLEAANT 1342
Cdd:TIGR04523 259 KDEQNKIkkqLSEKQKELEQNNKKIKELEKQLNQLKSEISDlnNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIIS 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1343 SLTKLLEEIKARRAVTDSECIQL---LHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAHTEMSLNEKITYLT 1419
Cdd:TIGR04523 339 QLNEQISQLKKELTNSESENSEKqreLEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQ 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1420 SEKEMASQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKEL 1499
Cdd:TIGR04523 419 QEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKEL 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1500 QERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNillrdGLNLQEECHKLSKEIQEM 1579
Cdd:TIGR04523 499 KKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELK-----KENLEKEIDEKNKEIEEL 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1580 QQslilEQEARAKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQ 1659
Cdd:TIGR04523 574 KQ----TQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQ 649
|
650 660
....*....|....*....|....*
gi 1941690766 1660 LAAHIKTLKSDFAALSKSKAELQEL 1684
Cdd:TIGR04523 650 IKETIKEIRNKWPEIIKKIKESKTK 674
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
678-879 |
1.86e-03 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 43.14 E-value: 1.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 678 HLVEMEDTLNKLQeAEIKVKELEV---------LQAKCNEQTKVIDNFTSQLKATEEKLLDLD--------ALRKASSEG 740
Cdd:PRK11637 41 HASDNRDQLKSIQ-QDIAAKEKSVrqqqqqrasLLAQLKKQEEAISQASRKLRETQNTLNQLNkqidelnaSIAKLEQQQ 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 741 KSEMKKLRQQLEAAEKQIKH--LEIEKNAESSKASSitREL-------QGRELKLTNLQENLSEVSQVKETLE----KEL 807
Cdd:PRK11637 120 AAQERLLAAQLDAAFRQGEHtgLQLILSGEESQRGE--RILayfgylnQARQETIAELKQTREELAAQKAELEekqsQQK 197
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1941690766 808 QILKEKFAEAS--EEAVSV-QRSMQETVNKLHQKEEQFNMLSSDLEKLRENL--ADMEAKFR-EKDEREEQLIKAKEK 879
Cdd:PRK11637 198 TLLYEQQAQQQklEQARNErKKTLTGLESSLQKDQQQLSELRANESRLRDSIarAEREAKARaEREAREAARVRDKQK 275
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
664-1444 |
1.89e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.67 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 664 LEAIRSKLDKAEdQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLD--LDALRKASSEGK 741
Cdd:pfam12128 236 IMKIRPEFTKLQ-QEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKekRDELNGELSAAD 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 742 SEMKKLRQQLEAAEKQIKHLEiEKNAESSKASsitrelqgrelkltnlQENLSEVSQVKETLEKELQILKEKfaeaseea 821
Cdd:pfam12128 315 AAVAKDRSELEALEDQHGAFL-DADIETAAAD----------------QEQLPSWQSELENLEERLKALTGK-------- 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 822 vsvQRSMQETVNKLHQKEEQFNmlSSDLEKLRENLADM-EAKFREKDEREEQLikakEKLENDIAEIMKmsgdnsSQLTK 900
Cdd:pfam12128 370 ---HQDVTAKYNRRRSKIKEQN--NRDIAGIKDKLAKIrEARDRQLAVAEDDL----QALESELREQLE------AGKLE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 901 MNDELRLKERDVEELQLKLTKAN-ENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCqel 979
Cdd:pfam12128 435 FNEEEYRLKSRLGELKLRLNQATaTPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQA--- 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 980 karyERATSETKTKHEEILQNLqktlldtedklkgarEENSGLLqeLEELRKQA-DKAKSLTYLLTSAkkeielmseelr 1058
Cdd:pfam12128 512 ----SRRLEERQSALDELELQL---------------FPQAGTL--LHFLRKEApDWEQSIGKVISPE------------ 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1059 glksekqLLSQEGNDLKLENGSLLSKLVELEAKIALLQGDQQKLWSVNETLNLEKEKFLEEKQDAekyyeqehlnkEALA 1138
Cdd:pfam12128 559 -------LLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEALQSA-----------REKQ 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1139 VEREKLLKEINVVQEEL-LKINVENDSLQASKVSMQALIEELQLSKDtliAKTEKDQEEKDHLEDQIKKLITENFILAKD 1217
Cdd:pfam12128 621 AAAEEQLVQANGELEKAsREETFARTALKNARLDLRRLFDEKQSEKD---KKNKALAERKDSANERLNSLEAQLKQLDKK 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1218 KDDIIQKLQRSYEELVKDQ----KALVQETEDLTAEKKSALEKL-SNLDNTCIALKVERDNVL-------QNNRNLQLET 1285
Cdd:pfam12128 698 HQAWLEEQKEQKREARTEKqaywQVVEGALDAQLALLKAAIAARrSGAKAELKALETWYKRDLaslgvdpDVIAKLKREI 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1286 DMLLQDQEKLNASLQAALQVKQLLRSEASGLRAQLddaskALRKAELETVQLEaANTSLTKLLEEIKARRAvtdseciQL 1365
Cdd:pfam12128 778 RTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRL-----ATQLSNIERAISE-LQQQLARLIADTKLRRA-------KL 844
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1366 LHEKETLAASERRLLAEKEELLSE-NRIITEKLHKCLEEAAHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKS 1444
Cdd:pfam12128 845 EMERKASEKQQVRLSENLRGLRCEmSKLATLKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADHS 924
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
854-1340 |
2.06e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.22 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 854 ENLADMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdnssqltkmnDELRLKERDVEELQLKLTKANENASFLQKSI 933
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEEL---------------EELEAELEELREELEKLEKLLQLLPLYQELE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 934 E-DMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKL 1012
Cdd:COG4717 136 AlEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEEL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1013 KGAREENSGLLQELEELRKQAdkaksltylltSAKKEIELMSEELRGLKSEKQLLSQEGNDlklenGSLLSKLVELEAKI 1092
Cdd:COG4717 216 EEAQEELEELEEELEQLENEL-----------EAAALEERLKEARLLLLIAAALLALLGLG-----GSLLSLILTIAGVL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1093 ALLQGdqqKLWSVNETLNLEKEKFLEEKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSM 1172
Cdd:COG4717 280 FLVLG---LLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1173 QALIEELQLskdtliaktekdqeekDHLEDQIKKLITENFilAKDKDDIIQKLQRsYEELVKDQKALVQETEDLTAEKKS 1252
Cdd:COG4717 357 EELEEELQL----------------EELEQEIAALLAEAG--VEDEEELRAALEQ-AEEYQELKEELEELEEQLEELLGE 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1253 ALEKLSNLDNTciALKVERDNVLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQL--LRSEASGLRAQLDDASKALRKA 1330
Cdd:COG4717 418 LEELLEALDEE--ELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELaeLLQELEELKAELRELAEEWAAL 495
|
490
....*....|
gi 1941690766 1331 ELETVQLEAA 1340
Cdd:COG4717 496 KLALELLEEA 505
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1492-1752 |
2.16e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.40 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1492 IDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKnlekEHTHILQAKESLDAQL--NTCCSEKNILLRDGLNLQ--- 1566
Cdd:COG3096 436 PENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARR----QFEKAYELVCKIAGEVerSQAWQTARELLRRYRSQQala 511
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1567 EECHKLSKEIQEMQQSLILEQEARAKESESSLYENNQLHGRMvLLEQEVEELRVCIEELqsekfvllqeksksEQELAEI 1646
Cdd:COG3096 512 QRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAE-ELEELLAELEAQLEEL--------------EEQAAEA 576
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1647 IEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQrnhevtlaekaQVMQDNQNLLAEKSEMMLE 1726
Cdd:COG3096 577 VEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEALADSQ-----------EVTAAMQQLLEREREATVE 645
|
250 260
....*....|....*....|....*.
gi 1941690766 1727 KDELLKEKETlaesyfiLQKEISQLA 1752
Cdd:COG3096 646 RDELAARKQA-------LESQIERLS 664
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1114-1527 |
2.45e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 42.96 E-value: 2.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1114 EKFLEEKQDAEKYYEQEHLNKEALAVEREKLLKEINVVQEELLKINVENDSLQASKVSMQALIEELQLSKDTLIAKTEKD 1193
Cdd:pfam07888 48 QAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAH 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1194 QEEKDHLEDQIKKLitenfilakdkddiiqklqrsyeelvkDQKALVQETEdltaekksaleklsnldntcialkverdn 1273
Cdd:pfam07888 128 EARIRELEEDIKTL---------------------------TQRVLERETE----------------------------- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1274 vLQNNRNLQLETDMLLQDQEKLNASLQAALQVKQllrSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIKA 1353
Cdd:pfam07888 152 -LERMKERAKKAGAQRKEEEAERKQLQAKLQQTE---EELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHR 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1354 RRAVTDSECIQLLHEKETLAASERRLLAEKEELLS----ENRIITEkLHKCLEEAAHTEMSLNEKITYLTSEKEMASQKM 1429
Cdd:pfam07888 228 KEAENEALLEELRSLQERLNASERKVEGLGEELSSmaaqRDRTQAE-LHQARLQAAQLTLQLADASLALREGRARWAQER 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1430 TEL----KKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKE 1505
Cdd:pfam07888 307 ETLqqsaEADKDRIEKLSAELQRLEERLQEERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAE 386
|
410 420
....*....|....*....|..
gi 1941690766 1506 NQELVASKCDLSLMLKEAQNTK 1527
Cdd:pfam07888 387 KQELLEYIRQLEQRLETVADAK 408
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
750-945 |
2.59e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.51 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 750 QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQ 829
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 830 ET-------------------------VNKLHQKE-EQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 883
Cdd:COG3883 97 RSggsvsyldvllgsesfsdfldrlsaLSKIADADaDLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQ 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1941690766 884 IAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQ 945
Cdd:COG3883 177 QAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 238
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
618-824 |
2.88e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.54 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 618 EKMRLDYQHEIENlqnqqDSERAAHAKEMEALRAklmkvIKEKENSLEAirskldKAEDQHLVEM-----------EDTL 686
Cdd:COG2433 319 EKLHLAREYGYDN-----DHERDALAAALKAYDA-----YKNKFERVEK------KVPPDVDRDEvkarvirglsiEEAL 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 687 NKLQEAEIKVKELEVLQAKCNEQTkvidnftsQLKATEEKLLDLDALRKassEGKSEMKKLRQQLEAAEKQIKHLEIEKN 766
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEER--------ELTEEEEEIRRLEEQVE---RLEAEVEELEAELEEKDERIERLERELS 451
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1941690766 767 AESSKASS---ITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKE-KFAEASEEAVSV 824
Cdd:COG2433 452 EARSEERReirKDREISRLDREIERLERELEEERERIEELKRKLERLKElWKLEHSGELVPV 513
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1817-2064 |
3.20e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1817 ASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL 1896
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1897 grsrdevtshQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRgenASA 1976
Cdd:COG4942 100 ----------EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA---ALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1977 KSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDfLNSVIVDLQRKNQDLKMKVEM 2056
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE-LEALIARLEAEAAAAAERTPA 245
|
....*...
gi 1941690766 2057 MSEAALNG 2064
Cdd:COG4942 246 AGFAALKG 253
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1198-1685 |
3.40e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1198 DHLEDQIKKLIT---ENFILAKDKDDIIQKLQRSYEELVKDQKALVQETEDLTAEKKSALEKLSNLDNTCIALKVERDNV 1274
Cdd:COG4717 49 ERLEKEADELFKpqgRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1275 LQNNRNLQLETDmLLQDQEKLNASLQAALQVKQLLRSEASgLRAQLDDASKAL-RKAELETVQLEAANTSLTKLLEEIKA 1353
Cdd:COG4717 129 PLYQELEALEAE-LAELPERLEELEERLEELRELEEELEE-LEAELAELQEELeELLEQLSLATEEELQDLAEELEELQQ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1354 RRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEAAHTEMSLNEKITYLTSE-KEMASQKMTEL 1432
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTiAGVLFLVLGLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1433 KKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLVVQENMKLLGNIDALKKELQERKKENQELvas 1512
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEEL--- 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1513 kcdlslmlkeaqntkknlekehtHILQAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKEIQEMQQSliLEQEARAK 1592
Cdd:COG4717 364 -----------------------QLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQ--LEELLGEL 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1593 ESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSK--SEQELAEIIEEKELLTAEAAQLAAHIKTLKSD 1670
Cdd:COG4717 419 EELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQleEDGELAELLQELEELKAELRELAEEWAALKLA 498
|
490
....*....|....*
gi 1941690766 1671 FAALSKSKAELQELH 1685
Cdd:COG4717 499 LELLEEAREEYREER 513
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1343-1874 |
3.45e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.74 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1343 SLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSENRIITEkLHKCLEEAAHTEMSLNEKITYLTSEK 1422
Cdd:PRK03918 211 EISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRE-LEERIEELKKEIEELEEKVKELKELK 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1423 EMAsQKMTELKKQQDSLLKEKSSLETQNGALLAERENSIKAIGDLK---------RQCDQESANRSLVVQENMKLLGNID 1493
Cdd:PRK03918 290 EKA-EEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEekeerleelKKKLKELEKRLEELEERHELYEEAK 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1494 ALKKELQERKKENQELvaSKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLD---AQLNTCCSE----KNILLRDGLNLQ 1566
Cdd:PRK03918 369 AKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITARIGELKkeiKELKKAIEElkkaKGKCPVCGRELT 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1567 EECHKLSKEIQEMQQSLILEQEARAKESESSLYENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLlqeKSKSEQELAEI 1646
Cdd:PRK03918 447 EEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKL---KKYNLEELEKK 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1647 IEEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDLQrnhevtlaekaqvmqdnqNLLAEKSEMMLE 1726
Cdd:PRK03918 524 AEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELA------------------ELLKELEELGFE 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1727 KDELLKEKETLAESYFilqKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSftaaqtaedamQIME 1806
Cdd:PRK03918 586 SVEELEERLKELEPFY---NEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRK-----------ELEE 651
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1941690766 1807 QMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1874
Cdd:PRK03918 652 LEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKA 719
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1724-2083 |
3.64e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.58 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1724 MLEKDELLKEKETLAESYFILQKEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQSFTAAQTAEdamq 1803
Cdd:PRK01156 158 ILEINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDD---- 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1804 imEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKE-LLTVENQKMEEFRKEIE---TLKQAAAQKS 1879
Cdd:PRK01156 234 --YNNLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEErHMKIINDPVYKNRNYINdyfKYKNDIENKK 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1880 QQLSALQ------EENVKLAEELGRSRDEVTSHQKLEEErsvLNNQLLEMKKRESKF-------------IKDADEEKAS 1940
Cdd:PRK01156 312 QILSNIDaeinkyHAIIKKLSVLQKDYNDYIKKKSRYDD---LNNQILELEGYEMDYnsylksieslkkkIEEYSKNIER 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1941 LQKSISITSALLTEKDAELEKLRNEVTV-LRGENASAKSLHSVVQTLESDKVKLElkvKNLELQLKENKRQLSSSSGNTD 2019
Cdd:PRK01156 389 MSAFISEILKIQEIDPDAIKKELNEINVkLQDISSKVSSLNQRIRALRENLDELS---RNMEMLNGQSVCPVCGTTLGEE 465
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 2020 TQAD------EDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMseaalngNGDDLNNYDSDDQEKQSKK 2083
Cdd:PRK01156 466 KSNHiinhynEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYL-------ESEEINKSINEYNKIESAR 528
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1162-2061 |
3.75e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 3.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1162 NDSLQASKVSMQALIEELQLSKDTLIAKTEKDQEEKDHLEDQIKKLiTENFILAKDKDDIIQKLQRSYEELVKDQKALVQ 1241
Cdd:pfam01576 91 SQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKL-EEDILLLEDQNSKLSKERKLLEERISEFTSNLA 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1242 ETEdltaEKKSALEKLSNLDNTCIALKVERdnvlqnnrnlqletdmlLQDQEKLNASLQAAlqvKQLLRSEASGLRAQLD 1321
Cdd:pfam01576 170 EEE----EKAKSLSKLKNKHEAMISDLEER-----------------LKKEEKGRQELEKA---KRKLEGESTDLQEQIA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1322 DASkalrkaeletVQLEAANTSLTKLLEEIKARRAVTDSECIQLLHEKETLAASERRLLAEKEELLSEN--RIITEKLHK 1399
Cdd:pfam01576 226 ELQ----------AQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERaaRNKAEKQRR 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1400 CL-EEAAHTEMSLNEKITYLTSEKEMASQKMTELKKQQDSLLKEKSSLETQNGALlaeRENSIKAIGDLKRQCDQESANR 1478
Cdd:pfam01576 296 DLgEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEM---RQKHTQALEELTEQLEQAKRNK 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1479 SLVVQENMKLLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNIL 1558
Cdd:pfam01576 373 ANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1559 LRDGLNLQEECHKLSKEIQEMQQslILEQEARAKESESSLYEN--NQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEK 1636
Cdd:pfam01576 453 EGKNIKLSKDVSSLESQLQDTQE--LLQEETRQKLNLSTRLRQleDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMK 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1637 SKSEQELA--EIIEE-KELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHSCLTKILDDL----------QRNHEVTL 1703
Cdd:pfam01576 531 KKLEEDAGtlEALEEgKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQrqlvsnlekkQKKFDQML 610
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1704 AEK----AQVMQDNQNLLAEKSE-------MMLEKDELLKEKETLAESYFILQKEISQLAKTNSHISANLLESQNENRTL 1772
Cdd:pfam01576 611 AEEkaisARYAEERDRAEAEAREketralsLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRAL 690
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1773 RKDKNKLTLKIRELETlqsftAAQTAEDA-------MQIME-QMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNV 1844
Cdd:pfam01576 691 EQQVEEMKTQLEELED-----ELQATEDAklrlevnMQALKaQFERDLQARDEQGEEKRRQLVKQVRELEAELEDERKQR 765
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1845 EELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSvlnnqllemk 1924
Cdd:pfam01576 766 AQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKL---------- 835
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1925 kreskfiKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTvlrgENASAKSLhsvvqtLESDKVKLELKVKNLELQL 2004
Cdd:pfam01576 836 -------KNLEAELLQLQEDLAASERARRQAQQERDELADEIA----SGASGKSA------LQDEKRRLEARIAQLEEEL 898
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1941690766 2005 KE---NKRQLSSSSGNTDTQADE---DERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAA 2061
Cdd:pfam01576 899 EEeqsNTELLNDRLRKSTLQVEQlttELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTV 961
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
336-748 |
3.95e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.36 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 336 LTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHD--QHVLELEAKMDQL 413
Cdd:PRK03918 298 LSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHElyEEAKAKKEELERL 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 414 RTmvEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEK---DLALRVQEVAELRRRLESN 490
Cdd:PRK03918 378 KK--RLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKakgKCPVCGRELTEEHRKELLE 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 491 KPAGDVDMSLSLLQEISSLQEKLEVTRTD------HQREITSLKEHFGAREETHQK-------EIKALYTATEKLSKENE 557
Cdd:PRK03918 456 EYTAELKRIEKELKEIEEKERKLRKELRElekvlkKESELIKLKELAEQLKELEEKlkkynleELEKKAEEYEKLKEKLI 535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 558 SLKSKLEHANKENSDVIALwKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMR---------LDYQHEI 628
Cdd:PRK03918 536 KLKGEIKSLKKELEKLEEL-KKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEpfyneylelKDAEKEL 614
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 629 ENLQNQQDSERAaHAKEMEALRAKLMKVIKEKENSLEAIRSKLDkaEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNE 708
Cdd:PRK03918 615 EREEKELKKLEE-ELDKAFEELAETEKRLEELRKELEELEKKYS--EEEYEELREEYLELSRELAGLRAELEELEKRREE 691
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1941690766 709 QTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLR 748
Cdd:PRK03918 692 IKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVK 731
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
543-1210 |
4.06e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.26 E-value: 4.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 543 KALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEelkvsfSKGLGTETAEFAELKTQIEKMRL 622
Cdd:TIGR00618 190 KSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQ------SHAYLTQKREAQEEQLKKQQLLK 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 623 DYQHEIENLQNQQdsERAAHAKEMEALRAKLMKVIKEKENSLEairskLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVL 702
Cdd:TIGR00618 264 QLRARIEELRAQE--AVLEETQERINRARKAAPLAAHIKAVTQ-----IEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQ 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 703 QAKCNEQTKVIDnftsQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRE---L 779
Cdd:TIGR00618 337 QSSIEEQRRLLQ----TLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREqatI 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 780 QGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAdM 859
Cdd:TIGR00618 413 DTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKA-V 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 860 EAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFL----QKSIED 935
Cdd:TIGR00618 492 VLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLkeqmQEIQQS 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 936 MTVKAEQSQQEAAKKHEEEKKELE----RKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQK---TLLDT 1008
Cdd:TIGR00618 572 FSILTQCDNRSKEDIPNLQNITVRlqdlTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALkltALHAL 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1009 EDKLKGAREENSGLLQELEELRKQA------DKAKSLTYLLTSAKKEIELMSEELRGLKSEKQLLSQEGNDLKLENGSLL 1082
Cdd:TIGR00618 652 QLTLTQERVREHALSIRVLPKELLAsrqlalQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLG 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1083 SKLVELEAKIALLQGDQQKL--WSVNETLNLEKEKFLEEKQDAEKYYEQEHL-----NKEALAVEREKLLKEINV----- 1150
Cdd:TIGR00618 732 SDLAAREDALNQSLKELMHQarTVLKARTEAHFNNNEEVTAALQTGAELSHLaaeiqFFNRLREEDTHLLKTLEAeigqe 811
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1941690766 1151 VQEELLKINVENDSLQASKVSMQALIEE---LQLSKDTLIAKTEKDQEEKDHLEDQIKKLITE 1210
Cdd:TIGR00618 812 IPSDEDILNLQCETLVQEEEQFLSRLEEksaTLGEITHQLLKYEECSKQLAQLTQEQAKIIQL 874
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
332-667 |
4.33e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.36 E-value: 4.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 332 RTGLLTETSSRYARKISGTTALQEA---LKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlardghdqhvlELEA 408
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELSDAsrkIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIE-----------NVKS 758
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 409 KMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSekSRIMELEKDLALRVQEVAELRrrle 488
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIE--ARLREIEQKLNRLTLEKEYLE---- 832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 489 snkpagdvdmslSLLQEISSLQEKLEVTRTDHQREITSL---KEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEH 565
Cdd:TIGR02169 833 ------------KEIQELQEQRIDLKEQIKSIEKEIENLngkKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRE 900
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 566 ANKENSDV---IALWKSKLETAIASHQQAMEELK-VSFSKGLGTETAEFAELKTQIEKMRLDYQHEIE-----NLQNQQD 636
Cdd:TIGR02169 901 LERKIEELeaqIEKKRKRLSELKAKLEALEEELSeIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRalepvNMLAIQE 980
|
330 340 350
....*....|....*....|....*....|.
gi 1941690766 637 SERAahAKEMEALRAKLMKVIKEKENSLEAI 667
Cdd:TIGR02169 981 YEEV--LKRLDELKEKRAKLEEERKAILERI 1009
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1402-2083 |
4.41e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 42.34 E-value: 4.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1402 EEAAHTEMSLNEKITYLTSEKEMASQKMTELKKqqdslLKEKSSLETQNGALLAERENSIKAIGDLKRQCDQESANRSLV 1481
Cdd:TIGR00606 217 EKACEIRDQITSKEAQLESSREIVKSYENELDP-----LKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELK 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1482 VQEnmKLLGNIDALKKELQERKKENQELVASKCDLSLMLKEAQNTKKNLEKEHTHIL--QAKESLDAQLNTCCSEKNILL 1559
Cdd:TIGR00606 292 MEK--VFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLveQGRLQLQADRHQEHIRARDSL 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1560 RDGLNLQEECHKLSKEI---QEMQQSLILEQEARAKESESSLYENNQLHGRMVLLEQEVEELRVcieelqsekfvllqek 1636
Cdd:TIGR00606 370 IQSLATRLELDGFERGPfseRQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRD---------------- 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1637 skSEQELAEIIE-EKELLTAEAAQLaahiKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEkaqvmqdnqN 1715
Cdd:TIGR00606 434 --EKKGLGRTIElKKEILEKKQEEL----KFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTE---------T 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1716 LLAEKSEMMLEKDELLKEKETLAESYFILQKEISQLAKTNShisanlLESQNENRTLRKDKNKLTLKIRELETLQSFTAA 1795
Cdd:TIGR00606 499 LKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEM------LTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNK 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1796 QTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDtlkeNNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAA 1875
Cdd:TIGR00606 573 KQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHIN----NELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEI 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1876 AQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISitsalltek 1955
Cdd:TIGR00606 649 EKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELK--------- 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1956 daELEKLRNEVTVLrgenasAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDF 2035
Cdd:TIGR00606 720 --KKEKRRDEMLGL------APGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV 791
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 1941690766 2036 lnSVIVDLQRKNQDLKMKVEMMSEAALNGNGDdlNNYDSDDQEKQSKK 2083
Cdd:TIGR00606 792 --TIMERFQMELKDVERKIAQQAAKLQGSDLD--RTVQQVNQEKQEKQ 835
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1607-1965 |
5.42e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 41.73 E-value: 5.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1607 RMVLLEQEVEELRVCIEELQSekfvLLQEKSKSEQELAEiieEKELLTAEAAQLAAHIKTLKSDFAALSKSKAELQELHS 1686
Cdd:pfam10174 339 RAAILQTEVDALRLRLEEKES----FLNKKTKQLQDLTE---EKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLR 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1687 CLTKILDDLQR----------NHEVTLAEKAQVMQDNQNLL-AEKSEMMLEKDELLKEKETLAESYFILQKEISQLAKTN 1755
Cdd:pfam10174 412 DKDKQLAGLKErvkslqtdssNTDTALTTLEEALSEKERIIeRLKEQREREDRERLEELESLKKENKDLKEKVSALQPEL 491
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1756 SHISANLLESQNENRTLRKDKNKLTLKIRELE------------TLQSFTAAQTAEDAMQIMEQMTKEKTETLASLEDTK 1823
Cdd:pfam10174 492 TEKESSLIDLKEHASSLASSGLKKDSKLKSLEiaveqkkeecskLENQLKKAHNAEEAVRTNPEINDRIRLLEQEVARYK 571
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1824 QTNAKLQNELDTLKENnLKNVEELNKSKElltvenQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELgrsrDEV 1903
Cdd:pfam10174 572 EESGKAQAEVERLLGI-LREVENEKNDKD------KKIAELESLTLRQMKEQNKKVANIKHGQQEMKKKGAQL----LEE 640
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1941690766 1904 TSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLqksiSITSALLTEKDAELEKLRNE 1965
Cdd:pfam10174 641 ARRREDNLADNSQQLQLEELMGALEKTRQELDATKARL----SSTQQSLAEKDGHLTNLRAE 698
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1520-1708 |
5.73e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.35 E-value: 5.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1520 LKEAQNTKKNLEKEHTHILQAKESLDAQLNTCCSEKNILLRDGLNLQEECHKLSKEIQEMQQSlILEQEARAKESESSLY 1599
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAE-IEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1600 EN----------------NQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAH 1663
Cdd:COG3883 97 RSggsvsyldvllgsesfSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQ 176
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1941690766 1664 IKTLKSDFAALSKSKAELQELHSCLTKILDDLQRNHEVTLAEKAQ 1708
Cdd:COG3883 177 QAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| PRK05431 |
PRK05431 |
seryl-tRNA synthetase; Provisional |
664-761 |
5.75e-03 |
|
seryl-tRNA synthetase; Provisional
Pssm-ID: 235461 [Multi-domain] Cd Length: 425 Bit Score: 41.59 E-value: 5.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 664 LEAIRSKLDK-AEDQHLVEMEDTLNKLQEAEIKVKEL----EVLQAKCNEQTKVIdnftSQLKATEEkllDLDALRKASS 738
Cdd:PRK05431 4 IKLIRENPEAvKEALAKRGFPLDVDELLELDEERRELqtelEELQAERNALSKEI----GQAKRKGE---DAEALIAEVK 76
|
90 100
....*....|....*....|...
gi 1941690766 739 EGKSEMKKLRQQLEAAEKQIKHL 761
Cdd:PRK05431 77 ELKEEIKALEAELDELEAELEEL 99
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
603-818 |
6.02e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 6.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 603 LGTETAEFAELKTQIEKMRLDYQHEIENLQ---NQQDSERAAHAKEMEALRAKLMKV---IKEKENSLEAIRSKLDKAED 676
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEkelAALKKEEKALLKQLAALERRIAALarrIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 677 QhLVEMEDTLNKLQEAeikVKELEVLQAKCNEQTKV------------------IDNFTSQLKATEEKL-LDLDALRKAS 737
Cdd:COG4942 91 E-IAELRAELEAQKEE---LAELLRALYRLGRQPPLalllspedfldavrrlqyLKYLAPARREQAEELrADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 738 SEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEA 817
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
.
gi 1941690766 818 S 818
Cdd:COG4942 247 G 247
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1275-1651 |
6.68e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.81 E-value: 6.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1275 LQNNRNLQLETDmllQDQEKLNASLQAALQVKQLLRSEAS---GLRAQLDDASKALRKAELETVQLEA--ANTSLTKLLE 1349
Cdd:PLN02939 59 RSSNSKLQSNTD---ENGQLENTSLRTVMELPQKSTSSDDdhnRASMQRDEAIAAIDNEQQTNSKDGEqlSDFQLEDLVG 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1350 EIKARravtdseciqllhEKETLAASERRLLAekeeLLSENRIITEKlhkcleEAahtemsLNEKITYLtsekEMasqKM 1429
Cdd:PLN02939 136 MIQNA-------------EKNILLLNQARLQA----LEDLEKILTEK------EA------LQGKINIL----EM---RL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1430 TELKKQQDSLLKEKSSLETqNGALLAERENSIKAIGDLKRQCDQE-SANRSLVVQENMKLLGNIDALKKELQERK----- 1503
Cdd:PLN02939 180 SETDARIKLAAQEKIHVEI-LEEQLEKLRNELLIRGATEGLCVHSlSKELDVLKEENMLLKDDIQFLKAELIEVAeteer 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1504 -----KENQELVASKCDLSLMLKEAQNTKKNLEKEHTHILQAK-ESLDAQLNTCCS--EKNILLRDGlnlqeeCHKLSKE 1575
Cdd:PLN02939 259 vfkleKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKvENLQDLLDRATNqvEKAALVLDQ------NQDLRDK 332
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1941690766 1576 IQEMQQSLileqeARAKESESSLYENNQLHGRMVLLEqevEELRVCIEELQSEkFVLLQEKSKSEQE-LAEIIEEKE 1651
Cdd:PLN02939 333 VDKLEASL-----KEANVSKFSSYKVELLQQKLKLLE---ERLQASDHEIHSY-IQLYQESIKEFQDtLSKLKEESK 400
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
721-971 |
6.77e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 6.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 721 KATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVK 800
Cdd:COG4372 31 EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 801 ETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREeqLIKAKEKL 880
Cdd:COG4372 111 EELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE--AEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 881 ENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELER 960
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250
....*....|.
gi 1941690766 961 KLSDLEKKMET 971
Cdd:COG4372 269 VEKDTEEEELE 279
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
848-1404 |
7.14e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 7.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 848 DLEKLRENLADMEAKfREKDEREEQLIKAKEKLENDIAEIMKMsgDNSSQLTKMNDELRLKERDVEELQLKLTKANENAS 927
Cdd:COG4913 236 DLERAHEALEDAREQ-IELLEPIRELAERYAAARERLAELEYL--RAALRLWFAQRRLELLEAELEELRAELARLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 928 FLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKmetsHNQCQELKARYERAtsetktkheeiLQNLQKTLLD 1007
Cdd:COG4913 313 RLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERE----LEERERRRARLEAL-----------LAALGLPLPA 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1008 TEDKLKGAREENSGLLQELEELRKQADKAksltylLTSAKKEIELMSEELRGLKSEKQLLSQegndlkleNGSLL-SKLV 1086
Cdd:COG4913 378 SAEEFAALRAEAAALLEALEEELEALEEA------LAEAEAALRDLRRELRELEAEIASLER--------RKSNIpARLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1087 ELEAKIA-LLQGDQQKLWSVNETLNLEKEkflEEK-QDA-EKYY---------EQEHLNKEALAVEREKLLKEINvvqee 1154
Cdd:COG4913 444 ALRDALAeALGLDEAELPFVGELIEVRPE---EERwRGAiERVLggfaltllvPPEHYAAALRWVNRLHLRGRLV----- 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1155 LLKINVENDSLQASKVSMQALIEEL-------------QLSKDTLIAKTEKDQEEKDH-----LEDQIK----------- 1205
Cdd:COG4913 516 YERVRTGLPDPERPRLDPDSLAGKLdfkphpfrawleaELGRRFDYVCVDSPEELRRHpraitRAGQVKgngtrhekddr 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1206 KLITENFIL-------AKDKDDIIQKLQRSYEELVKDQKALVQETEDLTaEKKSALEKLSNLDNTCIALKVERDNVlqnn 1278
Cdd:COG4913 596 RRIRSRYVLgfdnrakLAALEAELAELEEELAEAEERLEALEAELDALQ-ERREALQRLAEYSWDEIDVASAEREI---- 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1279 RNLQLETDMLLQDQEKLnASLQAALQVkqlLRSEASGLRAQLDDASKALRKAELETVQLEAANTSLTKLLEEIKARRAVT 1358
Cdd:COG4913 671 AELEAELERLDASSDDL-AALEEQLEE---LEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLE 746
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 1941690766 1359 DSECIQLLHEKETLAASERRLLAEKEELLSENRIITEKLHKCLEEA 1404
Cdd:COG4913 747 LRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERA 792
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
635-861 |
7.54e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 7.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 635 QDSERAAHAKEMEALRAKlmkvIKEKENSLEAIRSKLDKAEDQhLVEMEDTLNKLQEAEIKV-KELEVLQAKCNEQTKVI 713
Cdd:COG4942 18 QADAAAEAEAELEQLQQE----IAELEKELAALKKEEKALLKQ-LAALERRIAALARRIRALeQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 714 DNFTSQLKATEEKLLD-LDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITR---ELQGRELKLTNL 789
Cdd:COG4942 93 AELRAELEAQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRAdlaELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1941690766 790 QENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEA 861
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
730-886 |
8.19e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 8.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 730 LDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKE-------- 801
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyealqkei 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 802 -TLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmlssdlekLRENLADMEAKFREKDEREEQLIKAKEKL 880
Cdd:COG1579 99 eSLKRRISDLEDEILELMERIEELEEELAELEAELAELEAE----------LEEKKAELDEELAELEAELEELEAEREEL 168
|
....*.
gi 1941690766 881 ENDIAE 886
Cdd:COG1579 169 AAKIPP 174
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1586-2060 |
8.21e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 41.31 E-value: 8.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1586 EQEARAKESESslyENNQLHGRMVLLEQEVEELRVCIEELQSEKFVLLQEKSKSEQELAEIIEEKELLTAEAAQLAAHIK 1665
Cdd:pfam01576 79 ELESRLEEEEE---RSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERK 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1666 TLKSDFAALSKSKAELQELHSCLTKilddLQRNHEVTLAEKAQVMQDNQNLlaeKSEMMLEKDELLKEKETLAESYFILQ 1745
Cdd:pfam01576 156 LLEERISEFTSNLAEEEEKAKSLSK----LKNKHEAMISDLEERLKKEEKG---RQELEKAKRKLEGESTDLQEQIAELQ 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1746 KEISQLAKTNSHISANLLESQNENRTLRKDKNKLTLKIRELETLQS-----FTAAQTAEDAMQIMEQMTKEKTETLAS-L 1819
Cdd:pfam01576 229 AQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISelqedLESERAARNKAEKQRRDLGEELEALKTeL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1820 EDTKQTNAKlQNELDTLKENNL----KNVEELNKSKELLTVE-----NQKMEEFRKEIETLKQAAAQKSQQLSALQEENV 1890
Cdd:pfam01576 309 EDTLDTTAA-QQELRSKREQEVtelkKALEEETRSHEAQLQEmrqkhTQALEELTEQLEQAKRNKANLEKAKQALESENA 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1891 KLAEELgrsRDEVTSHQKLEEERSVLNNQLLEMKKRES---KFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVT 1967
Cdd:pfam01576 388 ELQAEL---RTLQQAKQDSEHKRKKLEGQLQELQARLSeseRQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVS 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1941690766 1968 VLRGENASAKSLhsvVQTLESDKVKLELKVKNLELQLKENKRQLSsssgntdtQADEDERAQESQIDFLNSVIVDLQRKN 2047
Cdd:pfam01576 465 SLESQLQDTQEL---LQEETRQKLNLSTRLRQLEDERNSLQEQLE--------EEEEAKRNVERQLSTLQAQLSDMKKKL 533
|
490
....*....|...
gi 1941690766 2048 QDLKMKVEMMSEA 2060
Cdd:pfam01576 534 EEDAGTLEALEEG 546
|
|
| |
