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Conserved domains on  [gi|1908832869|ref|NP_001374146|]
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protein ENTREP2 isoform 5 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 130-337 9.25e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.48  E-value: 9.25e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  130 APSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVtsiGQQVAESSSGDPNTSAGFSTPV-PADSTSLLVSEGTA 208
Cdd:PHA03247  2688 ARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAA---ARQASPALPAAPAPPAVPAGPAtPGGPARPARPPTTA 2764

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  209 TPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSE 288
Cdd:PHA03247  2765 GPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPG 2844

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1908832869  289 AVPGSASMSRSataacraqLSPAGDpdtwkTDQRPTPEPFPATSKERPR 337
Cdd:PHA03247  2845 PPPPSLPLGGS--------VAPGGD-----VRRRPPSRSPAAKPAAPAR 2880
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 130-337 9.25e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.48  E-value: 9.25e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  130 APSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVtsiGQQVAESSSGDPNTSAGFSTPV-PADSTSLLVSEGTA 208
Cdd:PHA03247  2688 ARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAA---ARQASPALPAAPAPPAVPAGPAtPGGPARPARPPTTA 2764

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  209 TPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSE 288
Cdd:PHA03247  2765 GPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPG 2844

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1908832869  289 AVPGSASMSRSataacraqLSPAGDpdtwkTDQRPTPEPFPATSKERPR 337
Cdd:PHA03247  2845 PPPPSLPLGGS--------VAPGGD-----VRRRPPSRSPAAKPAAPAR 2880
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 130-337 9.25e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.48  E-value: 9.25e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  130 APSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVtsiGQQVAESSSGDPNTSAGFSTPV-PADSTSLLVSEGTA 208
Cdd:PHA03247  2688 ARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAA---ARQASPALPAAPAPPAVPAGPAtPGGPARPARPPTTA 2764

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  209 TPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSE 288
Cdd:PHA03247  2765 GPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPG 2844

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1908832869  289 AVPGSASMSRSataacraqLSPAGDpdtwkTDQRPTPEPFPATSKERPR 337
Cdd:PHA03247  2845 PPPPSLPLGGS--------VAPGGD-----VRRRPPSRSPAAKPAAPAR 2880
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 182-349 1.12e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 44.39  E-value: 1.12e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  182 GDPNTSAGFSTPVPADSTSLLVSEGTATPGSS--------PSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRV 253
Cdd:PHA03307    69 TGPPPGPGTEAPANESRSTPTWSLSTLAPASParegsptpPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPP 148

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  254 SRSTSDPTLCTSSMAGDASShrPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATSK 333
Cdd:PHA03307   149 AASPPAAGASPAAVASDAAS--SRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGR 226

                          170       180
                   ....*....|....*....|
gi 1908832869  334 E----RPRSLVDSKAYADAR 349
Cdd:PHA03307   227 SaaddAGASSSDSSSSESSG 246
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 150-338 6.55e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.08  E-value: 6.55e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  150 PAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTA------TPGSSPSPDGPVGAP 223
Cdd:PHA03307   190 PAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGwgpeneCPLPRPAPITLPTRI 269

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  224 APSEPALP----PGHVSPEDPGMGSQVQPGPGR-VSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSR 298
Cdd:PHA03307   270 WEASGWNGpssrPGPASSSSSPRERSPSPSPSSpGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSR 349

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1908832869  299 SATAAcraqlSPAGDPDTWKTDQRPTPE---PFPATSKERPRS 338
Cdd:PHA03307   350 SPSPS-----RPPPPADPSSPRKRPRPSrapSSPAASAGRPTR 387
PHA03247 PHA03247
large tegument protein UL36; Provisional
 139-256 9.78e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.46  E-value: 9.78e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  139 DVAINSPGLLYPAELPPPYEAVVGQP-PASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPD 217
Cdd:PHA03247  2546 DDAGDPPPPLPPAAPPAAPDRSVPPPrPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPD 2625

                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1908832869  218 GPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRS 256
Cdd:PHA03247  2626 PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRP 2664
PRK13729 PRK13729
conjugal transfer pilus assembly protein TraB; Provisional
 177-257 2.34e-03

conjugal transfer pilus assembly protein TraB; Provisional


Pssm-ID: 184281 [Multi-domain]  Cd Length: 475  Bit Score: 39.81  E-value: 2.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869 177 AESSSGDPNTSAGfsTPVPADSTSLLVSEGTATPGSSPSPDGPVGAPAPSEP-ALPPGHVSPEDPGMGSQVQPGPGRVSR 255
Cdd:PRK13729  120 VKALGANPVTATG--EPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPtAFYPGNGVTPPPQVTYQSVPVPNRIQR 197


                  ..
gi 1908832869 256 ST 257
Cdd:PRK13729  198 KT 199
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
128-337 2.76e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.86  E-value: 2.76e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869 128 DFAPSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPntsagfstPVPADSTSLLVSEGT 207
Cdd:PRK12323  371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRS--------PAPEALAAARQASAR 442

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869 208 ATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPScsqDLEAGLS 287
Cdd:PRK12323  443 GPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPA---QPDAAPA 519

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1908832869 288 EAVpgSASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPR 337
Cdd:PRK12323  520 GWV--AESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPR 567
PRK12495 PRK12495
hypothetical protein; Provisional
 174-314 3.71e-03

hypothetical protein; Provisional


Pssm-ID: 183558 [Multi-domain]  Cd Length: 226  Bit Score: 38.70  E-value: 3.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869 174 QQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRV 253
Cdd:PRK12495   66 QPVTEDGAAGDDAGDGAEATAPSDAGSQASPDDDAQPAAEAEAADQSAPPEASSTSATDEAATDPPATAAARDGPTPDPT 145

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1908832869 254 SRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRaQLSPAGDP 314
Cdd:PRK12495  146 AQPATPDERRSPRQRPPVSGEPPTPSTPDAHVAGTLQAARESLVETLARFAR-RAAATDDP 205
PHA03378 PHA03378
EBNA-3B; Provisional
 144-350 5.17e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 39.28  E-value: 5.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869 144 SPGLLYPAELPPpyeaVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPAdSTSLLVSEGTATPGSSPSPDGPVGAP 223
Cdd:PHA03378  700 APTPMRPPAAPP----GRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPA-AAPGRARPPAAAPGRARPPAAAPGAP 774

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869 224 APSEPALPPghvspedPGMGSQVQPGPGRVSRSTSDPT---LCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSA 300
Cdd:PHA03378  775 TPQPPPQAP-------PAPQQRPRGAPTPQPPPQAGPTsmqLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALE 847

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1908832869 301 TAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPRSLVDSKAYADARV 350
Cdd:PHA03378  848 RQAAAGPTPSPGSGTSDKIVQAPVFYPPVLQPIQVMRQLGSVRAAAASTV 897
motB PRK12799
flagellar motor protein MotB; Reviewed
 166-277 5.86e-03

flagellar motor protein MotB; Reviewed


Pssm-ID: 183756 [Multi-domain]  Cd Length: 421  Bit Score: 38.54  E-value: 5.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869 166 ASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTAT--PGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMG 243
Cdd:PRK12799  303 AVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTTQSATTTQASAValSSAGVLPSDVTLPGTVALPAAEPVNMQPQPMSTT 382

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1908832869 244 SQVQPGPGRVSRSTSDPTlcTSSMAGDASSHRPS 277
Cdd:PRK12799  383 ETQQSSTGNITSTANGPT--TSLPAAPASNIPVS 414
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 144-338 8.63e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 38.61  E-value: 8.63e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  144 SPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAG---FSTPVPADSTSLLVSEGTATPGSSPSPDGPV 220
Cdd:PHA03307   125 SPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRqaaLPLSSPEETARAPSSPPAEPPPSTPPAAASP 204

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1908832869  221 GAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPScSQDLEAGLSEAVPGSASMSRSA 300
Cdd:PHA03307   205 RPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPA-PITLPTRIWEASGWNGPSSRPG 283

                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 1908832869  301 TAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPRS 338
Cdd:PHA03307   284 PASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSS 321
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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