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Conserved domains on  [gi|1858900812|ref|NP_001371312|]
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threonine synthase-like 2 isoform 5 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Thr-synth_2 cd01560
Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of ...
2-359 0e+00

Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.


:

Pssm-ID: 107203 [Multi-domain]  Cd Length: 460  Bit Score: 544.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812   2 WYVSTRGVAPRVNFEGALFSGYAPDGGLFMPEELPQLDRGTLCQWSTLSYPGLVKELCALFIGSELlPKDELNDLIDRAF 81
Cdd:cd01560     1 KYVSTRGGNPGVSFSEALLSGLAPDGGLYVPEELPKLSAEEIASWSGLSYQELAFEVLSLFIGDEI-PEDDLKSLIDRAY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812  82 SRFRHREVVHLSRLRNGLNVLELWHGVTYAFKDLSLSCTTQFLQYFLEKREKHVTVVVGTSGDTGSAAIESVQGAKNMDI 161
Cdd:cd01560    80 SFFRHPDIAPLVQLGDNLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRRNERITILVATSGDTGSAAIEGFRGKPNVDV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 162 IVLLPKGHCTKIQELQMTTVLKQNVHVFGVEGNSDELDEPIKTVFADVAFVKKHNLMSLNSINWSRVLVQMAHHFFAYFQ 241
Cdd:cd01560   160 VVLYPKGGVSPIQELQMTTLPADNVHVVAVEGDFDDCQSLVKALFADEDFNKKLKLSSANSINWARILAQIVYYFYAYLQ 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 242 CTPSLdthPLPLVEVVVPTGAAGNLAAGYIAQKIGLPI-RLVVAVNRNDIIHRTVQQGDFSLSEAVKSTLASAMDIQVPY 320
Cdd:cd01560   240 LLKRG---EGEKVEFSVPTGNFGNILAGYYAKKMGLPIkKLIVATNENDVLRRFFKTGRYDRRESLKQTLSPAMDILKSS 316
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1858900812 321 NMERVFWLLSGSDSQVTRALMEQFERTQSVNLPKELHSK 359
Cdd:cd01560   317 NFERLLFLLAGRDRTKVKMLMEEFEATGFLSLPKEELKK 355
 
Name Accession Description Interval E-value
Thr-synth_2 cd01560
Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of ...
2-359 0e+00

Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.


Pssm-ID: 107203 [Multi-domain]  Cd Length: 460  Bit Score: 544.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812   2 WYVSTRGVAPRVNFEGALFSGYAPDGGLFMPEELPQLDRGTLCQWSTLSYPGLVKELCALFIGSELlPKDELNDLIDRAF 81
Cdd:cd01560     1 KYVSTRGGNPGVSFSEALLSGLAPDGGLYVPEELPKLSAEEIASWSGLSYQELAFEVLSLFIGDEI-PEDDLKSLIDRAY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812  82 SRFRHREVVHLSRLRNGLNVLELWHGVTYAFKDLSLSCTTQFLQYFLEKREKHVTVVVGTSGDTGSAAIESVQGAKNMDI 161
Cdd:cd01560    80 SFFRHPDIAPLVQLGDNLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRRNERITILVATSGDTGSAAIEGFRGKPNVDV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 162 IVLLPKGHCTKIQELQMTTVLKQNVHVFGVEGNSDELDEPIKTVFADVAFVKKHNLMSLNSINWSRVLVQMAHHFFAYFQ 241
Cdd:cd01560   160 VVLYPKGGVSPIQELQMTTLPADNVHVVAVEGDFDDCQSLVKALFADEDFNKKLKLSSANSINWARILAQIVYYFYAYLQ 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 242 CTPSLdthPLPLVEVVVPTGAAGNLAAGYIAQKIGLPI-RLVVAVNRNDIIHRTVQQGDFSLSEAVKSTLASAMDIQVPY 320
Cdd:cd01560   240 LLKRG---EGEKVEFSVPTGNFGNILAGYYAKKMGLPIkKLIVATNENDVLRRFFKTGRYDRRESLKQTLSPAMDILKSS 316
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1858900812 321 NMERVFWLLSGSDSQVTRALMEQFERTQSVNLPKELHSK 359
Cdd:cd01560   317 NFERLLFLLAGRDRTKVKMLMEEFEATGFLSLPKEELKK 355
ThrC COG0498
Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the ...
2-339 7.21e-49

Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 440264 [Multi-domain]  Cd Length: 394  Bit Score: 169.61  E-value: 7.21e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812   2 WYVSTRGVAPrvnFEGALFSGyAPD-GGLfMPEELPQLDRGTLCQWSTL-SYPglvkelcalfigsELLPKDELNDLIDr 79
Cdd:COG0498     1 KLRCTRCGAT---FSDALLYL-CPDcGGL-LPDSYPALSREDLASRRGLwRYR-------------ELLPFDDEEKAVS- 61
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812  80 afsrFRHRE--VVHLSRL----RNGLNVLELWHGVTYAFKDLSLSCTTQFLqyfleKREKHVTVVVGTSGdTGSAAIESV 153
Cdd:COG0498    62 ----LGEGGtpLVKAPRLadelGKNLYVKEEGHNPTGSFKDRAMQVAVSLA-----LERGAKTIVCASSG-NGSAALAAY 131
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 154 QGAKNMDIIVLLPKGHCTKIQELQMTTvlkQNVHVFGVEGNSDELDEPIKTVFADvafvkkHNLMSLNSINWSRVLVQMA 233
Cdd:COG0498   132 AARAGIEVFVFVPEGKVSPGQLAQMLT---YGAHVIAVDGNFDDAQRLVKELAAD------EGLYAVNSINPARLEGQKT 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 234 HHFFAYFQCTPSLDThplplveVVVPTGAAGNLAAGYIA----QKIGLPIRL-----VVAVNRNDIIHRtVQQGDFSLSE 304
Cdd:COG0498   203 YAFEIAEQLGRVPDW-------VVVPTGNGGNILAGYKAfkelKELGLIDRLprliaVQATGCNPILTA-FETGRDEYEP 274
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1858900812 305 AVKSTLASAMDIQVPYNMERVFWLLSGSDSQVTRA 339
Cdd:COG0498   275 ERPETIAPSMDIGNPSNGERALFALRESGGTAVAV 309
thrC TIGR00260
threonine synthase; Involved in threonine biosynthesis it catalyses the reaction ...
66-328 1.70e-33

threonine synthase; Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model. [Amino acid biosynthesis, Aspartate family]


Pssm-ID: 272986 [Multi-domain]  Cd Length: 327  Bit Score: 127.11  E-value: 1.70e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812  66 ELLPKDELN--DLIDRAFSRFRHREVVHLSRLRNgLNVLELWHGVTYAFKDLSLScttQFLQYFLEkrEKHVTVVVGTSG 143
Cdd:TIGR00260   6 EFLPVTEKDlvDLGEGVTPLFRAPALAANVGIKN-LYVKELGHNPTLSFKDRGMA---VALTKALE--LGNDTVLCASTG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 144 DTGSAAIeSVQGAKNMDIIVLLPKGhctKIQELQMTTVLKQNVHVFGVEGNSDELDEPIKTVFADVafvKKHNLMSLNSI 223
Cdd:TIGR00260  80 NTGAAAA-AYAGKAGLKVVVLYPAG---KISLGKLAQALGYNAEVVAIDGNFDDAQRLVKQLFEDK---PALGLNSANSI 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 224 nWSRVLVQMAHhFFAYFQCTPSLDTHplplvEVVVPTGAAGNLAA---GYIAQKIG----LPI-RLVVAVNRNDIIHRTV 295
Cdd:TIGR00260 153 -PYRLEGQKTY-AFEAVEQLGWEAPD-----KVVVPVPNSGNFGAiwkGFKEKKMLgldsLPVkRGIQAEGAADIVRAFL 225
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1858900812 296 QQGDFSLSEAvKSTLASAMDIQVPYNMERVFWL 328
Cdd:TIGR00260 226 EGGQWEPIET-PETLSTAMDIGNPANWPRALEA 257
Thr_synth_N pfam14821
Threonine synthase N terminus; This domain is found at the N-terminus of many threonine ...
2-81 2.93e-33

Threonine synthase N terminus; This domain is found at the N-terminus of many threonine synthase enzymes.


Pssm-ID: 464335 [Multi-domain]  Cd Length: 79  Bit Score: 119.06  E-value: 2.93e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812   2 WYVSTRGVAPRVNFEGALFSGYAPDGGLFMPEELPQLDRGTLCQWSTLSYPGLVKELCALFIGSElLPKDELNDLIDRAF 81
Cdd:pfam14821   1 KYISTRGGAPPLSFEDALLKGLAPDGGLYVPEEIPQLSAEELASWRGLSYQELAFEVLSLFIGDD-IPEEDLKALIERAY 79
 
Name Accession Description Interval E-value
Thr-synth_2 cd01560
Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of ...
2-359 0e+00

Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.


Pssm-ID: 107203 [Multi-domain]  Cd Length: 460  Bit Score: 544.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812   2 WYVSTRGVAPRVNFEGALFSGYAPDGGLFMPEELPQLDRGTLCQWSTLSYPGLVKELCALFIGSELlPKDELNDLIDRAF 81
Cdd:cd01560     1 KYVSTRGGNPGVSFSEALLSGLAPDGGLYVPEELPKLSAEEIASWSGLSYQELAFEVLSLFIGDEI-PEDDLKSLIDRAY 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812  82 SRFRHREVVHLSRLRNGLNVLELWHGVTYAFKDLSLSCTTQFLQYFLEKREKHVTVVVGTSGDTGSAAIESVQGAKNMDI 161
Cdd:cd01560    80 SFFRHPDIAPLVQLGDNLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRRNERITILVATSGDTGSAAIEGFRGKPNVDV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 162 IVLLPKGHCTKIQELQMTTVLKQNVHVFGVEGNSDELDEPIKTVFADVAFVKKHNLMSLNSINWSRVLVQMAHHFFAYFQ 241
Cdd:cd01560   160 VVLYPKGGVSPIQELQMTTLPADNVHVVAVEGDFDDCQSLVKALFADEDFNKKLKLSSANSINWARILAQIVYYFYAYLQ 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 242 CTPSLdthPLPLVEVVVPTGAAGNLAAGYIAQKIGLPI-RLVVAVNRNDIIHRTVQQGDFSLSEAVKSTLASAMDIQVPY 320
Cdd:cd01560   240 LLKRG---EGEKVEFSVPTGNFGNILAGYYAKKMGLPIkKLIVATNENDVLRRFFKTGRYDRRESLKQTLSPAMDILKSS 316
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1858900812 321 NMERVFWLLSGSDSQVTRALMEQFERTQSVNLPKELHSK 359
Cdd:cd01560   317 NFERLLFLLAGRDRTKVKMLMEEFEATGFLSLPKEELKK 355
ThrC COG0498
Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the ...
2-339 7.21e-49

Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 440264 [Multi-domain]  Cd Length: 394  Bit Score: 169.61  E-value: 7.21e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812   2 WYVSTRGVAPrvnFEGALFSGyAPD-GGLfMPEELPQLDRGTLCQWSTL-SYPglvkelcalfigsELLPKDELNDLIDr 79
Cdd:COG0498     1 KLRCTRCGAT---FSDALLYL-CPDcGGL-LPDSYPALSREDLASRRGLwRYR-------------ELLPFDDEEKAVS- 61
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812  80 afsrFRHRE--VVHLSRL----RNGLNVLELWHGVTYAFKDLSLSCTTQFLqyfleKREKHVTVVVGTSGdTGSAAIESV 153
Cdd:COG0498    62 ----LGEGGtpLVKAPRLadelGKNLYVKEEGHNPTGSFKDRAMQVAVSLA-----LERGAKTIVCASSG-NGSAALAAY 131
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 154 QGAKNMDIIVLLPKGHCTKIQELQMTTvlkQNVHVFGVEGNSDELDEPIKTVFADvafvkkHNLMSLNSINWSRVLVQMA 233
Cdd:COG0498   132 AARAGIEVFVFVPEGKVSPGQLAQMLT---YGAHVIAVDGNFDDAQRLVKELAAD------EGLYAVNSINPARLEGQKT 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 234 HHFFAYFQCTPSLDThplplveVVVPTGAAGNLAAGYIA----QKIGLPIRL-----VVAVNRNDIIHRtVQQGDFSLSE 304
Cdd:COG0498   203 YAFEIAEQLGRVPDW-------VVVPTGNGGNILAGYKAfkelKELGLIDRLprliaVQATGCNPILTA-FETGRDEYEP 274
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1858900812 305 AVKSTLASAMDIQVPYNMERVFWLLSGSDSQVTRA 339
Cdd:COG0498   275 ERPETIAPSMDIGNPSNGERALFALRESGGTAVAV 309
thrC TIGR00260
threonine synthase; Involved in threonine biosynthesis it catalyses the reaction ...
66-328 1.70e-33

threonine synthase; Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model. [Amino acid biosynthesis, Aspartate family]


Pssm-ID: 272986 [Multi-domain]  Cd Length: 327  Bit Score: 127.11  E-value: 1.70e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812  66 ELLPKDELN--DLIDRAFSRFRHREVVHLSRLRNgLNVLELWHGVTYAFKDLSLScttQFLQYFLEkrEKHVTVVVGTSG 143
Cdd:TIGR00260   6 EFLPVTEKDlvDLGEGVTPLFRAPALAANVGIKN-LYVKELGHNPTLSFKDRGMA---VALTKALE--LGNDTVLCASTG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 144 DTGSAAIeSVQGAKNMDIIVLLPKGhctKIQELQMTTVLKQNVHVFGVEGNSDELDEPIKTVFADVafvKKHNLMSLNSI 223
Cdd:TIGR00260  80 NTGAAAA-AYAGKAGLKVVVLYPAG---KISLGKLAQALGYNAEVVAIDGNFDDAQRLVKQLFEDK---PALGLNSANSI 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 224 nWSRVLVQMAHhFFAYFQCTPSLDTHplplvEVVVPTGAAGNLAA---GYIAQKIG----LPI-RLVVAVNRNDIIHRTV 295
Cdd:TIGR00260 153 -PYRLEGQKTY-AFEAVEQLGWEAPD-----KVVVPVPNSGNFGAiwkGFKEKKMLgldsLPVkRGIQAEGAADIVRAFL 225
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1858900812 296 QQGDFSLSEAvKSTLASAMDIQVPYNMERVFWL 328
Cdd:TIGR00260 226 EGGQWEPIET-PETLSTAMDIGNPANWPRALEA 257
Thr_synth_N pfam14821
Threonine synthase N terminus; This domain is found at the N-terminus of many threonine ...
2-81 2.93e-33

Threonine synthase N terminus; This domain is found at the N-terminus of many threonine synthase enzymes.


Pssm-ID: 464335 [Multi-domain]  Cd Length: 79  Bit Score: 119.06  E-value: 2.93e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812   2 WYVSTRGVAPRVNFEGALFSGYAPDGGLFMPEELPQLDRGTLCQWSTLSYPGLVKELCALFIGSElLPKDELNDLIDRAF 81
Cdd:pfam14821   1 KYISTRGGAPPLSFEDALLKGLAPDGGLYVPEEIPQLSAEELASWRGLSYQELAFEVLSLFIGDD-IPEEDLKALIERAY 79
Trp-synth-beta_II cd00640
Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP) ...
89-285 2.14e-24

Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine.


Pssm-ID: 107202 [Multi-domain]  Cd Length: 244  Bit Score: 100.28  E-value: 2.14e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812  89 VVHLSRLRNGLN----VLELWHGVTYAFKDLSLSCTTQFLQYFLEKreKHVTVVVGTSGDTGSAAIESVQgAKNMDIIVL 164
Cdd:cd00640     3 LVRLKRLSKLGGaniyLKLEFLNPTGSFKDRGALNLILLAEEEGKL--PKGVIIESTGGNTGIALAAAAA-RLGLKCTIV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 165 LPKGhCTKIQELQMTTvlkQNVHVFGVEGNSDELDEPIKTVFADVafvkkHNLMSLNS-INWSRVLVQMAHHFFAYFQCT 243
Cdd:cd00640    80 MPEG-ASPEKVAQMRA---LGAEVVLVPGDFDDAIALAKELAEED-----PGAYYVNQfDNPANIAGQGTIGLEILEQLG 150
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1858900812 244 PsldthpLPLVEVVVPTGAAGNLAAGYIAQKIGLPIRLVVAV 285
Cdd:cd00640   151 G------QKPDAVVVPVGGGGNIAGIARALKELLPNVKVIGV 186
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
89-319 1.86e-08

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 55.01  E-value: 1.86e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812  89 VVHLSRLRNGLNV-----LElWHGVTYAFKDLslscTTQFLQYFLEKREKHVTVVVGTSGDTGSAAIESVQgAKNMDIIV 163
Cdd:pfam00291  10 LVRLPRLSKELGVdvylkLE-SLNPTGSFKDR----GALNLLLRLKEGEGGKTVVEASSGNHGRALAAAAA-RLGLKVTI 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1858900812 164 LLPKGhcTKIQELQMTTVLKQNVHVfgVEGNSDELDEPIKTVFADVAfvKKHNLMSL-NSINWsRVLVQMAHHFFAyfQC 242
Cdd:pfam00291  84 VVPED--APPGKLLLMRALGAEVVL--VGGDYDEAVAAARELAAEGP--GAYYINQYdNPLNI-EGYGTIGLEILE--QL 154
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1858900812 243 TPSLDThplplveVVVPTGAAGNLAAGYIAQKIGLP-IRLV-VAVNRNDIIHRTVQQGDfSLSEAVKSTLASAMDIQVP 319
Cdd:pfam00291 155 GGDPDA-------VVVPVGGGGLIAGIARGLKELGPdVRVIgVEPEGAPALARSLAAGR-PVPVPVADTIADGLGVGDE 225
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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