|
Name |
Accession |
Description |
Interval |
E-value |
| beta-trefoil_Ricin_CRYBG1 |
cd23464 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1993-2129 |
2.85e-89 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 1 (CRYBG1) and similar proteins; CRYBG1, also called absent in melanoma 1 protein (AIM1), may function as a suppressor of malignant melanoma. It may exert its effects through interactions with the cytoskeleton. CRYBG1 belongs to the beta/gamma-crystallin family. It contains a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467342 Cd Length: 137 Bit Score: 286.31 E-value: 2.85e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1993 QKRIYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRIAEDCCLTIVGSLVTSGSKLGLALDQ 2072
Cdd:cd23464 1 QKRVYFRLRNKETGCFMSTNGNLDDLKLLRIQVLEDTGSDDQIWVYQDGLIRCRMAEDCCLETVGNLVTAGSKLGLSLEQ 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1696926949 2073 NADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMVL 2129
Cdd:cd23464 81 GKDNQFWSITSDGRIYSKLKPDLVLDIKGGQQYDQNHVILNTFDEEKLTQRWEVEIL 137
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1627-1720 |
5.31e-33 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 122.99 E-value: 5.31e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1627 KVVVYEKPFFEGKCVELETGMCSFvmeggeteeatgDDHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKA 1706
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSL------------QERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSD 68
|
90
....*....|....
gi 1696926949 1707 WGGYNGELQSLRPI 1720
Cdd:pfam00030 69 WGAPNDRIGSLRPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1728-1811 |
1.67e-29 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 112.97 E-value: 1.67e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1728 HMIMYSEKNFgsKGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKISS 1807
Cdd:pfam00030 1 KIVLYEKENF--QGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGS 78
|
....
gi 1696926949 1808 VQPI 1811
Cdd:pfam00030 79 LRPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1912-1990 |
1.85e-28 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 110.28 E-value: 1.85e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1912 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSG-CRQIGSLRP 1990
Cdd:pfam00030 2 IVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGApNDRIGSLRP 81
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1627-1720 |
3.41e-28 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 109.52 E-value: 3.41e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1627 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEeatgddhlpftsVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKA 1706
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDN------------VSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQE 68
|
90
....*....|....
gi 1696926949 1707 WGGYNGELQSLRPI 1720
Cdd:smart00247 69 WGGFNDQISSIRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1912-1990 |
1.55e-27 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 107.59 E-value: 1.55e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1912 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSG-CRQIGSLRP 1990
Cdd:smart00247 2 ITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGfNDQISSIRR 81
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1824-1903 |
1.09e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 102.19 E-value: 1.09e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1824 QIHLFSEPQFQGHSQSFEETTSQIDDSF---STKSCRVSGGSWVVYDGENFTGNQYVLEEGHYPCLSAMGCpPGATFKSL 1900
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGfnsRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGA-PNDRIGSL 79
|
...
gi 1696926949 1901 RFI 1903
Cdd:pfam00030 80 RPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1532-1613 |
2.25e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 101.42 E-value: 2.25e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1532 HIDLFTEPEGLGILSSYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEEAYIGSMR 1611
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLR 80
|
..
gi 1696926949 1612 PL 1613
Cdd:pfam00030 81 PI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1728-1811 |
1.71e-23 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 96.04 E-value: 1.71e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1728 HMIMYSEKNFGskGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKISS 1807
Cdd:smart00247 1 KITLYEDENFQ--GRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISS 78
|
....
gi 1696926949 1808 VQPI 1811
Cdd:smart00247 79 IRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1532-1613 |
1.09e-20 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 87.95 E-value: 1.09e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1532 HIDLFTEPEGLGILSSYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEEAYIGSMR 1611
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSIR 80
|
..
gi 1696926949 1612 PL 1613
Cdd:smart00247 81 RI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1824-1903 |
1.35e-20 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 87.95 E-value: 1.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1824 QIHLFSEPQFQGHSQSFEETTSQIDDSFS---TKSCRVSGGSWVVYDGENFTGNQYVLEEGHYPCLSAMGcPPGATFKSL 1900
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSrdnVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWG-GFNDQISSI 79
|
...
gi 1696926949 1901 RFI 1903
Cdd:smart00247 80 RRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1431-1522 |
4.11e-18 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 80.63 E-value: 4.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1431 KVVIYSEPDVSEKCIEVFSD---IQDCSSWSLspVILIKVVRGCWILYEQPNFEGHSIPLEEGELELSGLWGiedilerh 1507
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDcpsLQDYGSRDN--VSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWG-------- 70
|
90
....*....|....*
gi 1696926949 1508 eeAESDKpvvIGSIR 1522
Cdd:smart00247 71 --GFNDQ---ISSIR 80
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1431-1524 |
2.61e-13 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 67.13 E-value: 2.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1431 KVVIYSEPDVSEKCIEVFSDIQDCSSWSLSPVIL-IKVVRGCWILYEQPNFEGHSIPLEEGELELSGLWGiedilerhee 1509
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNsIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWG---------- 70
|
90
....*....|....*
gi 1696926949 1510 AESDKpvvIGSIRHV 1524
Cdd:pfam00030 71 APNDR---IGSLRPI 82
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
192-621 |
1.09e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 74.05 E-value: 1.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 192 EAEGELPESGGPAAPPDAELSPRWSSS---------AAAVAVQQCHENDSPQLEPLEAEGEPFPDATTTAKQLHSSPGNS 262
Cdd:PHA03307 14 AAEGGEFFPRPPATPGDAADDLLSGSQgqlvsdsaeLAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLS 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 263 SRQENAETPARSPGEDASPGAgheqeaflgvrgaPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPPkgasdl 342
Cdd:PHA03307 94 TLAPASPAREGSPTPPGPSSP-------------DPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPA------ 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 343 PGEPPAEGAAHTASSAQA-------DCTARPKGHAHPAKVLtldiyLSKTEGAQVDEPVVITPRAEDCGDWDDMEKRSSG 415
Cdd:PHA03307 155 AGASPAAVASDAASSRQAalplsspEETARAPSSPPAEPPP-----STPPAAASPRPPRRSSPISASASSPAPAPGRSAA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 416 RRSGRRRGSQKSTDSPGADAELPESAARDDAVFDD---EVAPNAASDNASAEKKVKSPRAAlDGGVASAASPESKPSPGT 492
Cdd:PHA03307 230 DDAGASSSDSSSSESSGCGWGPENECPLPRPAPITlptRIWEASGWNGPSSRPGPASSSSS-PRERSPSPSPSSPGSGPA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 493 KGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGpRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELP 572
Cdd:PHA03307 309 PSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS-RSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTR 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1696926949 573 VKSSSLLPEIKpehkrgpLPNHFNGRAEGGRSRELGRAA-GAPGASDADG 621
Cdd:PHA03307 388 RRARAAVAGRA-------RRRDATGRFPAGRPRPSPLDAgAASGAFYARY 430
|
|
| RICIN |
smart00458 |
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. |
2002-2124 |
1.08e-09 |
|
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication.
Pssm-ID: 214672 [Multi-domain] Cd Length: 118 Bit Score: 57.91 E-value: 1.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 2002 NKATGLFMSTNGNLedlklLRIQVMEDVGADD-QIWIY-QEGCIKCRiAEDCCLTIVGSLvtsGSKLGLALDQN-ADSQF 2078
Cdd:smart00458 3 SGNTGKCLDVNGNK-----NPVGLFDCHGTGGnQLWKLtSDGAIRIK-DTDLCLTANGNT---GSTVTLYSCDGtNDNQY 73
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1696926949 2079 WSLKSDGRIYSkLKPNLVLDIKGGTqyDQNHIILNTVSKEKfTQVW 2124
Cdd:smart00458 74 WEVNKDGTIRN-PDSGKCLDVKDGN--TGTKVILWTCSGNP-NQKW 115
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
265-644 |
1.29e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 56.61 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 265 QENAETPARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPA-----GGLGEAPNGAPSVCAEEgsLGPRNARSQPPKGA 339
Cdd:COG5180 15 VPIPPNAARPVLSPELWAAANNDAVSQGDRSALASSPTRPYArkifePLDIKLALGKPQLPSVA--EPEAYLDPAPPKSS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 340 SDLPGEPPAEGAAHTASSAQADCTARPKG-----HAHPAKVLTLDIYLSKTEGAQVD-EPVVITPRAEDcGDWDDMEKRS 413
Cdd:COG5180 93 PDTPEEQLGAPAGDLLVLPAAKTPELAAGalpapAAAAALPKAKVTREATSASAGVAlAAALLQRSDPI-LAKDPDGDSA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 414 SGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEV---------APNAASDNASAEKKVKSP---RAALDGGVASA 481
Cdd:COG5180 172 STLPPPAEKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAqeeppdltgGADHPRPEAASSPKVDPPstsEARSRPATVDA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 482 ASPESKPSPGTKGQLRGESDRSKQPPPAS------------SPTKRKGRSRALEAV-PAPPASGPRAPAKESPPKRVPDP 548
Cdd:COG5180 252 QPEMRPPADAKERRRAAIGDTPAAEPPGLpvleagsepqsdAPEAETARPIDVKGVaSAPPATRPVRPPGGARDPGTPRP 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 549 SPVTKgTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNG-----RAEGGRSRELGRAAGAPGAsdADGLK 623
Cdd:COG5180 332 GQPTE-RPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGSSGGdgapfQPPNGAPQPGLGRRGAPGP--PMGAG 408
|
410 420
....*....|....*....|.
gi 1696926949 624 PRNHFGVGRSTVTTKVTLPAK 644
Cdd:COG5180 409 DLVQAALDGGGRETASLGGAA 429
|
|
| Ricin_B_lectin |
pfam00652 |
Ricin-type beta-trefoil lectin domain; |
1997-2124 |
9.33e-07 |
|
Ricin-type beta-trefoil lectin domain;
Pssm-ID: 395527 [Multi-domain] Cd Length: 126 Bit Score: 49.84 E-value: 9.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1997 YFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDvGADDQIW-IYQEGCIKCRiAEDCCLTIVGSlvTSGSKLGLAL-DQNA 2074
Cdd:pfam00652 2 TGRIRNRASGKCLDVPGGSSAGGPVGLYPCHG-SNGNQLWtLTGDGTIRSV-ASDLCLDVGST--ADGAKVVLWPcHPGN 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1696926949 2075 DSQFWSLKSDGR-IYSKlKPNLVLDIKGGTQyDQNHIILNTVSKEKFTQVW 2124
Cdd:pfam00652 78 GNQRWRYDEDGTqIRNP-QSGKCLDVSGAGT-SNGKVILWTCDSGNPNQQW 126
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
257-738 |
8.23e-06 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 50.84 E-value: 8.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 257 SSPGNSSRQEnaETPARSPGEDASPGAGHEQeaflgVRGApGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPP 336
Cdd:pfam03546 27 SSEEESDSEE--ETPAAKTPLQAKPSGKTPQ-----VRAA-SAPAKESPRKGAPPVPPGKTGPAAAQAQAGKPEEDSESS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 337 KGASDLPGEPPAeGAAHTASSAQAdctaRPKG---HAHPAKVLTLDiylSKTEGAQVDEPVVITPRAedcgdwddmekrs 413
Cdd:pfam03546 99 SEESDSDGETPA-AATLTTSPAQV----KPLGknsQVRPASTVGKG---PSGKGANPAPPGKAGSAA------------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 414 sGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAAldGGVASAASPESkpSPGTK 493
Cdd:pfam03546 158 -PLVQVGKKEEDSESSSEESDSEGEAPPAATQAKPSGKILQVRPASGPAKGAAPAPPQKA--GPVATQVKAER--SKEDS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 494 GQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAK-ESPPKRVPDPSPVTKGTAAESGEEAARAIPR--E 570
Cdd:pfam03546 233 ESSEESSDSEEEAPAAATPAQAKPALKTPQTKASPRKGTPITPTSaKVPPVRVGTPAPWKAGTVTSPACASSPAVARgaQ 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 571 LPVKSSSLLPEIKPEHKRGPLPNhfNGRAEGGRSRELGRAAGAPGAsdadglkprnhfgvGRSTVTTKVTLPAKPKHVEL 650
Cdd:pfam03546 313 RPEEDSSSSEESESEEETAPAAA--VGQAKSVGKGLQGKAASAPTK--------------GPSGQGTAPVPPGKTGPAVA 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 651 NLKTPKNLDSLGNEHNPFSQP--VHKGNTATKISLFENKRTNSSPRHTDIRGQRNTPASSKTFVGRAKLNLAKKAKemeq 728
Cdd:pfam03546 377 QVKAEAQEDSESSEEESDSEEaaATPAQVKASGKTPQAKANPAPTKASSAKGAASAPGKVVAAAAQAKQGSPAKVK---- 452
|
490
....*....|
gi 1696926949 729 PEKKVMPNSP 738
Cdd:pfam03546 453 PPARTPQNSA 462
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-356 |
6.43e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 6.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 2 PLSPPAQGDPGEPSPCRPPKKHTTFHLWRSKKKQQPAPPDCGVFVPHPLPAPAGEARAldvvdgkyVVRDSQEFPLHCGE 81
Cdd:PHA03307 109 PGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDA--------ASSRQAALPLSSPE 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 82 SqffhtTSEALGSLLLESGIFKKSRAQPPEDNRRKPVLGKLGTLFTAGRRRNSRNGLESPTRSNAKPLSPKDVVASPKLP 161
Cdd:PHA03307 181 E-----TARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENEC 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 162 ERESERSRSQSSQLKQTDTSEEGSPRENPREAEGELPESGGPAAPPDAELSPRWSSSAAAVAVQQCHENDSPqlEPLEAE 241
Cdd:PHA03307 256 PLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS--STSSSS 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 242 GEPFPDATTTAKQLHSSPGNSSRQENAETPARSPGEDASPGAGHEqeaflgvRGAPGSPTQERPAGGLGEapngaPSVCA 321
Cdd:PHA03307 334 ESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSP-------AASAGRPTRRRARAAVAG-----RARRR 401
|
330 340 350
....*....|....*....|....*....|....*
gi 1696926949 322 EEGSLGPRNARSQPPKGASDLPGEPPAEGAAHTAS 356
Cdd:PHA03307 402 DATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPS 436
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
425-550 |
6.25e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 41.29 E-value: 6.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 425 QKSTDSPGADAELPEsAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSK 504
Cdd:NF040712 208 EPADARPEEVEPAPA-AEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPAPGAA 286
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1696926949 505 QPPPASSPTkrkgrsralEAVPAPPAsGPRAPAKESPPKRVPDPSP 550
Cdd:NF040712 287 ETPEAAEPP---------APAPAAPA-APAAPEAEEPARPEPPPAP 322
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| beta-trefoil_Ricin_CRYBG1 |
cd23464 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1993-2129 |
2.85e-89 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 1 (CRYBG1) and similar proteins; CRYBG1, also called absent in melanoma 1 protein (AIM1), may function as a suppressor of malignant melanoma. It may exert its effects through interactions with the cytoskeleton. CRYBG1 belongs to the beta/gamma-crystallin family. It contains a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467342 Cd Length: 137 Bit Score: 286.31 E-value: 2.85e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1993 QKRIYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRIAEDCCLTIVGSLVTSGSKLGLALDQ 2072
Cdd:cd23464 1 QKRVYFRLRNKETGCFMSTNGNLDDLKLLRIQVLEDTGSDDQIWVYQDGLIRCRMAEDCCLETVGNLVTAGSKLGLSLEQ 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1696926949 2073 NADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMVL 2129
Cdd:cd23464 81 GKDNQFWSITSDGRIYSKLKPDLVLDIKGGQQYDQNHVILNTFDEEKLTQRWEVEIL 137
|
|
| beta-trefoil_Ricin_CRYBG |
cd23430 |
ricin B-type lectin domain, beta-trefoil fold, found in the beta/gamma crystallin ... |
1996-2128 |
1.41e-76 |
|
ricin B-type lectin domain, beta-trefoil fold, found in the beta/gamma crystallin domain-containing protein (CRYBG) family; The CRYBG family includes three members: CRYBG1, CRYBG2, and CRYBG3/vlAKAP. CRYBG1, also called absent in melanoma 1 protein (AIM1), may function as a suppressor of malignant melanoma. It may exert its effects through interactions with the cytoskeleton. CRYBG2 is also called absent in melanoma 1-like protein (AIM1L). CRYBG3/vlAKAP, also called very large A-kinase anchor protein, is an anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA). It binds to the dimeric RII-alpha regulatory subunit of PKA (PRKAR2A/PRKAR2B). CRYBG proteins belong to the beta/gamma-crystallin family. They all contain a ricin B-type lectin domain with a beta-trefoil fold at the C-terminus. The beta-trefoil fold is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467308 [Multi-domain] Cd Length: 133 Bit Score: 249.82 E-value: 1.41e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1996 IYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRIAEDCCLTIVGSLVTSGSKLGLALDQNAD 2075
Cdd:cd23430 1 VYFRLRNKATGLFLSVNGNLEDLKLLRVQVMPDVGADDQIWYYQEGLIKCRIAEDCCLTVIGSLVTPGSKVGLWLEQNAD 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1696926949 2076 SQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMV 2128
Cdd:cd23430 81 RQFWSLKSDGRIYSKLKPNLVLDVKGGTQYDQNHVILNTPSEEKFTQVWEIMV 133
|
|
| beta-trefoil_Ricin_vlAKAP |
cd23463 |
ricin B-type lectin domain, beta-trefoil fold, found in very large A-kinase anchor protein ... |
1993-2129 |
2.10e-33 |
|
ricin B-type lectin domain, beta-trefoil fold, found in very large A-kinase anchor protein (vlAKAP) and similar proteins; vlAKAP, also called beta/gamma crystallin domain-containing protein 3 (CRYBG3), is an anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA). It binds to the dimeric RII-alpha regulatory subunit of PKA (PRKAR2A/PRKAR2B). vlAKAP belongs to the beta/gamma-crystallin family. It contains a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467341 Cd Length: 136 Bit Score: 126.40 E-value: 2.10e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1993 QKRIYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRiAEDCCLTIVGSLVTSGSKLGLALDQ 2072
Cdd:cd23463 1 QPRVYLRIKNRAQGLYLTTEGNLADPRATSVCVSQYNGKDTQIWYYCRGLLKSK-ANDACLDVIGGKDNPGSKVALWTEH 79
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1696926949 2073 NADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMVL 2129
Cdd:cd23463 80 GKTHQKWRINEDGTISSHLSDDLVLDLKGGNYYDKDHLIVNNPEEDQQTQKWDIELL 136
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1627-1720 |
5.31e-33 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 122.99 E-value: 5.31e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1627 KVVVYEKPFFEGKCVELETGMCSFvmeggeteeatgDDHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKA 1706
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSL------------QERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSD 68
|
90
....*....|....
gi 1696926949 1707 WGGYNGELQSLRPI 1720
Cdd:pfam00030 69 WGAPNDRIGSLRPI 82
|
|
| beta-trefoil_Ricin_CRYBG2 |
cd23465 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1993-2129 |
5.36e-30 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 2 (CRYBG2) and similar proteins; CRYBG2, also called absent in melanoma 1-like protein (AIM1L), is a beta/gamma-crystallin family protein with a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467343 Cd Length: 136 Bit Score: 116.51 E-value: 5.36e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1993 QKRIYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWIYQEGCIKCRIAEDCCLTIVGSlVTSGSKLGLALDQ 2072
Cdd:cd23465 1 QRRVYFRLRNRELGLYLAVPDGVEDMKAGRVVVTEQQEGMSHVWFYEDGLLKNQMAPTMSLQVIGP-PDNGAKVVLWSET 79
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1696926949 2073 NADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIILNTVSKEKFTQVWEAMVL 2129
Cdd:cd23465 80 RQPRQTWSIQPSGHILSQMFEGMILDVKGGRTYDRDHVVLWEVSEERPSQIWDMEVL 136
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1728-1811 |
1.67e-29 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 112.97 E-value: 1.67e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1728 HMIMYSEKNFgsKGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKISS 1807
Cdd:pfam00030 1 KIVLYEKENF--QGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGS 78
|
....
gi 1696926949 1808 VQPI 1811
Cdd:pfam00030 79 LRPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1912-1990 |
1.85e-28 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 110.28 E-value: 1.85e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1912 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSG-CRQIGSLRP 1990
Cdd:pfam00030 2 IVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGApNDRIGSLRP 81
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1627-1720 |
3.41e-28 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 109.52 E-value: 3.41e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1627 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEeatgddhlpftsVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKA 1706
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDN------------VSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQE 68
|
90
....*....|....
gi 1696926949 1707 WGGYNGELQSLRPI 1720
Cdd:smart00247 69 WGGFNDQISSIRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1912-1990 |
1.55e-27 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 107.59 E-value: 1.55e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1912 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSG-CRQIGSLRP 1990
Cdd:smart00247 2 ITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGfNDQISSIRR 81
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1824-1903 |
1.09e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 102.19 E-value: 1.09e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1824 QIHLFSEPQFQGHSQSFEETTSQIDDSF---STKSCRVSGGSWVVYDGENFTGNQYVLEEGHYPCLSAMGCpPGATFKSL 1900
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGfnsRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGA-PNDRIGSL 79
|
...
gi 1696926949 1901 RFI 1903
Cdd:pfam00030 80 RPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1532-1613 |
2.25e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 101.42 E-value: 2.25e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1532 HIDLFTEPEGLGILSSYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEEAYIGSMR 1611
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLR 80
|
..
gi 1696926949 1612 PL 1613
Cdd:pfam00030 81 PI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1728-1811 |
1.71e-23 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 96.04 E-value: 1.71e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1728 HMIMYSEKNFGskGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKISS 1807
Cdd:smart00247 1 KITLYEDENFQ--GRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISS 78
|
....
gi 1696926949 1808 VQPI 1811
Cdd:smart00247 79 IRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1532-1613 |
1.09e-20 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 87.95 E-value: 1.09e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1532 HIDLFTEPEGLGILSSYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEEAYIGSMR 1611
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSIR 80
|
..
gi 1696926949 1612 PL 1613
Cdd:smart00247 81 RI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1824-1903 |
1.35e-20 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 87.95 E-value: 1.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1824 QIHLFSEPQFQGHSQSFEETTSQIDDSFS---TKSCRVSGGSWVVYDGENFTGNQYVLEEGHYPCLSAMGcPPGATFKSL 1900
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSrdnVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWG-GFNDQISSI 79
|
...
gi 1696926949 1901 RFI 1903
Cdd:smart00247 80 RRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1431-1522 |
4.11e-18 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 80.63 E-value: 4.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1431 KVVIYSEPDVSEKCIEVFSD---IQDCSSWSLspVILIKVVRGCWILYEQPNFEGHSIPLEEGELELSGLWGiedilerh 1507
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDcpsLQDYGSRDN--VSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWG-------- 70
|
90
....*....|....*
gi 1696926949 1508 eeAESDKpvvIGSIR 1522
Cdd:smart00247 71 --GFNDQ---ISSIR 80
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1431-1524 |
2.61e-13 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 67.13 E-value: 2.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1431 KVVIYSEPDVSEKCIEVFSDIQDCSSWSLSPVIL-IKVVRGCWILYEQPNFEGHSIPLEEGELELSGLWGiedilerhee 1509
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNsIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWG---------- 70
|
90
....*....|....*
gi 1696926949 1510 AESDKpvvIGSIRHV 1524
Cdd:pfam00030 71 APNDR---IGSLRPI 82
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
192-621 |
1.09e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 74.05 E-value: 1.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 192 EAEGELPESGGPAAPPDAELSPRWSSS---------AAAVAVQQCHENDSPQLEPLEAEGEPFPDATTTAKQLHSSPGNS 262
Cdd:PHA03307 14 AAEGGEFFPRPPATPGDAADDLLSGSQgqlvsdsaeLAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLS 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 263 SRQENAETPARSPGEDASPGAgheqeaflgvrgaPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPPkgasdl 342
Cdd:PHA03307 94 TLAPASPAREGSPTPPGPSSP-------------DPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPA------ 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 343 PGEPPAEGAAHTASSAQA-------DCTARPKGHAHPAKVLtldiyLSKTEGAQVDEPVVITPRAEDCGDWDDMEKRSSG 415
Cdd:PHA03307 155 AGASPAAVASDAASSRQAalplsspEETARAPSSPPAEPPP-----STPPAAASPRPPRRSSPISASASSPAPAPGRSAA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 416 RRSGRRRGSQKSTDSPGADAELPESAARDDAVFDD---EVAPNAASDNASAEKKVKSPRAAlDGGVASAASPESKPSPGT 492
Cdd:PHA03307 230 DDAGASSSDSSSSESSGCGWGPENECPLPRPAPITlptRIWEASGWNGPSSRPGPASSSSS-PRERSPSPSPSSPGSGPA 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 493 KGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGpRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELP 572
Cdd:PHA03307 309 PSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS-RSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTR 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1696926949 573 VKSSSLLPEIKpehkrgpLPNHFNGRAEGGRSRELGRAA-GAPGASDADG 621
Cdd:PHA03307 388 RRARAAVAGRA-------RRRDATGRFPAGRPRPSPLDAgAASGAFYARY 430
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
182-591 |
1.52e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 73.28 E-value: 1.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 182 EEGSPRENPREAEGELPE-----SGGPAAPPDAELSPRWSSSAAAVAVQQCHEND----SPQLEPLEAEGEPFPDATTTA 252
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADdllsgSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGpppgPGTEAPANESRSTPTWSLSTL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 253 KQLHSSPGNSSRQENAET-----PARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPAGGLGEAPNGAPSVCAEEGSL- 326
Cdd:PHA03307 96 APASPAREGSPTPPGPSSpdpppPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALp 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 327 ---GPRNARSqPPKGASDLPGEPPAEGAAHT--------ASSAQADCTARPKGHAHPAKVLTLDiyLSKTEGAQVDEpvv 395
Cdd:PHA03307 176 lssPEETARA-PSSPPAEPPPSTPPAAASPRpprrsspiSASASSPAPAPGRSAADDAGASSSD--SSSSESSGCGW--- 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 396 iTPRAEdCGDWDDMEKRSSGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALD 475
Cdd:PHA03307 250 -GPENE-CPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 476 GGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRaleavpAPPASGPRAPAKESPPKRVPDPSPvtKGT 555
Cdd:PHA03307 328 STSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPS------RAPSSPAASAGRPTRRRARAAVAG--RAR 399
|
410 420 430
....*....|....*....|....*....|....*.
gi 1696926949 556 AAESGEEAARAIPRELPVKSSSLLPEIKPehkRGPL 591
Cdd:PHA03307 400 RRDATGRFPAGRPRPSPLDAGAASGAFYA---RYPL 432
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
182-605 |
3.39e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 69.20 E-value: 3.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 182 EEGSPReNPREAEGELPESGGPAAPPDAELSPRWSSSAAAVavqqcHENDSPQLEPLEAEGEPFPDATttakqlhSSPGN 261
Cdd:PHA03247 2594 QSARPR-APVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSP-----AANEPDPHPPPTVPPPERPRDD-------PAPGR 2660
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 262 SSRQENAETPARSPGEDASPGAGHEQEAFLGVrgAPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPPKGASD 341
Cdd:PHA03247 2661 VSRPRRARRLGRAAQASSPPQRPRRRAARPTV--GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAA 2738
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 342 LPGEPPAEGAAHTASSAQADCTARPKGHAHPAkvltldiylsktegAQVDEPVVITPRAedcgdwddmekrssgrrsgrr 421
Cdd:PHA03247 2739 PAPPAVPAGPATPGGPARPARPPTTAGPPAPA--------------PPAAPAAGPPRRL--------------------- 2783
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 422 rgsqkstdSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSP------GTKGQ 495
Cdd:PHA03247 2784 --------TRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGppppslPLGGS 2855
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 496 LRGESDRSKQPPPASSPTK-------------RKGRSRALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEE 562
Cdd:PHA03247 2856 VAPGGDVRRRPPSRSPAAKpaaparppvrrlaRPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP 2935
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1696926949 563 AARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNGRAEGGRSR 605
Cdd:PHA03247 2936 PPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFR 2978
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
305-570 |
1.18e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 67.18 E-value: 1.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 305 PAGGLGEAPNGAPSVCAEEGSLGPRnARSQPPKGASDLPGEPPAEGAAHTA----SSAQADCTARPKGHAHPAKVLTldi 380
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPG-ARAAAAVGASAVPAVTAVTGAAGAAlapkAAAAAAATRAEAPPAAPAPPAT--- 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 381 ylskteGAQVDEPVVITPRAEDCGDWDDMEKRSSGRRSGRRRGSQKSTDSPGADAelPESAARDDAVFDDEVAPNAASDN 460
Cdd:PRK07003 436 ------ADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDA--PPDAAFEPAPRAAAPSAATPAAV 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 461 ASAEKKVKSPRAaldggvaSAASPESKPSPgtkgqlrgesdRSKQP-PPASSPTKRKG-------------------RSR 520
Cdd:PRK07003 508 PDARAPAAASRE-------DAPAAAAPPAP-----------EARPPtPAAAAPAARAGgaaaaldvlrnagmrvssdRGA 569
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1696926949 521 ALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAES-GEEAARAIPRE 570
Cdd:PRK07003 570 RAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDApPNGAARAEQAA 620
|
|
| beta-trefoil_Ricin_GllA-1 |
cd23454 |
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; ... |
1997-2112 |
6.20e-10 |
|
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; Gellin proteins act as central effectors of wound-induced protoplasmic gelation. They possess ten related N-terminal beta-trefoil domains (Gll-1 to Gll-10) that contribute to distinct gelation-related activities. The beta-trefoil domains show low sequence similarity to members of the functionally diverse ricin B lectin domain family. They are characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain bears a potential sugar binding site. Gellin from M. circinelloides has been called GellinA (also known as GllA). The model corresponds to GllA-1 domain, which is a remote family member of the ricin B-type lectin domain.
Pssm-ID: 467332 [Multi-domain] Cd Length: 136 Bit Score: 59.25 E-value: 6.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1997 YFRLRNKATGLFMSTNGNLEDLK---LLRIQVMEDVgaDDQIWIYQEGCIkCRIAEDCCLTIVGSLVTSGSKLGL---AL 2070
Cdd:cd23454 2 WFFIKSSSNGLVLDVEHGSLKSGakvVLAPLKTKDY--ESQLWRYDDGYL-VNKASGLVLDIQGGVVKSGTRLVQspkKP 78
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1696926949 2071 DQNADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQNHIIL 2112
Cdd:cd23454 79 SKDANNQRWGLTADGYIYLLSNPSLVLGIKGNETREGARVIL 120
|
|
| RICIN |
smart00458 |
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. |
2002-2124 |
1.08e-09 |
|
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication.
Pssm-ID: 214672 [Multi-domain] Cd Length: 118 Bit Score: 57.91 E-value: 1.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 2002 NKATGLFMSTNGNLedlklLRIQVMEDVGADD-QIWIY-QEGCIKCRiAEDCCLTIVGSLvtsGSKLGLALDQN-ADSQF 2078
Cdd:smart00458 3 SGNTGKCLDVNGNK-----NPVGLFDCHGTGGnQLWKLtSDGAIRIK-DTDLCLTANGNT---GSTVTLYSCDGtNDNQY 73
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1696926949 2079 WSLKSDGRIYSkLKPNLVLDIKGGTqyDQNHIILNTVSKEKfTQVW 2124
Cdd:smart00458 74 WEVNKDGTIRN-PDSGKCLDVKDGN--TGTKVILWTCSGNP-NQKW 115
|
|
| beta-trefoil_Ricin-like |
cd00161 |
ricin B-type lectin domain, beta-trefoil fold; The ricin B-type lectin domain is a ... |
1997-2124 |
4.28e-09 |
|
ricin B-type lectin domain, beta-trefoil fold; The ricin B-type lectin domain is a carbohydrate-binding domain formed from presumed gene triplication. It shows a beta-trefoil fold characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. The ricin B-type lectin domain was originally found in Ricin, which is a legume lectin from the seeds of the castor bean plant, Ricinus communis. It is also found in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases, or proteases, which serve diverse functions such as inhibitory toxicity, enzymatic activity, and signal transduction. The ricin B-type lectin domain can be present in one or more copies and has been shown in some instances to bind simple sugars, such as galactose or lactose. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B-type lectin domain has also been referred as the (QxW)3 domain and the three homologous regions as the QxW repeats. A disulfide bond is also conserved in some QxW repeats.
Pssm-ID: 467293 [Multi-domain] Cd Length: 134 Bit Score: 56.61 E-value: 4.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1997 YFRLRNKATGLFMS-TNGNLEDLKllRIQVMEDVGADDQIWIYQE-----GCIKCRiAEDCCLTIVGSLVTSGSKLGLAL 2070
Cdd:cd00161 2 TYRIVNAASGKCLDvAGGSTANGA--PVQQWTCNGGANQQWTLTPvgdgyYTIRNV-ASGKCLDVAGGSTANGANVQQWT 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1696926949 2071 DQNADSQFWSLKSDGRIYSKLKP---NLVLDIKGGTQYDQNHIILNTVSKEKfTQVW 2124
Cdd:cd00161 79 CNGGDNQQWRLEPVGDGYYRIVNkhsGKCLDVSGGSTANGANVQQWTCNGGA-NQQW 134
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
183-574 |
2.50e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 59.23 E-value: 2.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 183 EGSPRENPREAEGelPESGGPAAPPDAELSPRWSSSAAAVAVQQCHEnDSPQLEPLEAEGEPFPDATTTAkqlhSSPGNS 262
Cdd:PRK07764 413 AAAAPAAAAAPAP--AAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPP-PAAAPSAQPAPAPAAAPEPTAA----PAPAPP 485
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 263 SRQENAETPARSPGEDASPGAGH--------------------------EQEA-FLGVRGapGSPTQERPAGGLGEA--- 312
Cdd:PRK07764 486 AAPAPAAAPAAPAAPAAPAGADDaatlrerwpeilaavpkrsrktwailLPEAtVLGVRG--DTLVLGFSTGGLARRfas 563
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 313 PNGAPSVC--------------AEEGSLGPRNARSQPPKGASDLPGEPPAEGAAHTASSAQADcTARPKGHAHPAKvltl 378
Cdd:PRK07764 564 PGNAEVLVtalaeelggdwqveAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAA-PAPAGAAAAPAE---- 638
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 379 diylskTEGAQVDEPVVITPRAEDCGDWDDMEKRSSGRRSGRRrgsqkstDSPGADAELPESAARddavfddeVAPNAAS 458
Cdd:PRK07764 639 ------ASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGG-------AAPAAPPPAPAPAAP--------AAPAGAA 697
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 459 DNASAEKKVKSPRAAldggvaSAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAK 538
Cdd:PRK07764 698 PAQPAPAPAATPPAG------QADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPA 771
|
410 420 430
....*....|....*....|....*....|....*.
gi 1696926949 539 ESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVK 574
Cdd:PRK07764 772 AAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAME 807
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
453-619 |
1.07e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.19 E-value: 1.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 453 APNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASG 532
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 533 PRAPA-KESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNGRAEGGRSRELGRAA 611
Cdd:PRK12323 455 AAAPAaAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADP 534
|
....*...
gi 1696926949 612 GAPGASDA 619
Cdd:PRK12323 535 DDAFETLA 542
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
265-644 |
1.29e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 56.61 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 265 QENAETPARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPA-----GGLGEAPNGAPSVCAEEgsLGPRNARSQPPKGA 339
Cdd:COG5180 15 VPIPPNAARPVLSPELWAAANNDAVSQGDRSALASSPTRPYArkifePLDIKLALGKPQLPSVA--EPEAYLDPAPPKSS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 340 SDLPGEPPAEGAAHTASSAQADCTARPKG-----HAHPAKVLTLDIYLSKTEGAQVD-EPVVITPRAEDcGDWDDMEKRS 413
Cdd:COG5180 93 PDTPEEQLGAPAGDLLVLPAAKTPELAAGalpapAAAAALPKAKVTREATSASAGVAlAAALLQRSDPI-LAKDPDGDSA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 414 SGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEV---------APNAASDNASAEKKVKSP---RAALDGGVASA 481
Cdd:COG5180 172 STLPPPAEKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAqeeppdltgGADHPRPEAASSPKVDPPstsEARSRPATVDA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 482 ASPESKPSPGTKGQLRGESDRSKQPPPAS------------SPTKRKGRSRALEAV-PAPPASGPRAPAKESPPKRVPDP 548
Cdd:COG5180 252 QPEMRPPADAKERRRAAIGDTPAAEPPGLpvleagsepqsdAPEAETARPIDVKGVaSAPPATRPVRPPGGARDPGTPRP 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 549 SPVTKgTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNG-----RAEGGRSRELGRAAGAPGAsdADGLK 623
Cdd:COG5180 332 GQPTE-RPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGSSGGdgapfQPPNGAPQPGLGRRGAPGP--PMGAG 408
|
410 420
....*....|....*....|.
gi 1696926949 624 PRNHFGVGRSTVTTKVTLPAK 644
Cdd:COG5180 409 DLVQAALDGGGRETASLGGAA 429
|
|
| Ricin_B_lectin |
pfam00652 |
Ricin-type beta-trefoil lectin domain; |
1997-2124 |
9.33e-07 |
|
Ricin-type beta-trefoil lectin domain;
Pssm-ID: 395527 [Multi-domain] Cd Length: 126 Bit Score: 49.84 E-value: 9.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1997 YFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDvGADDQIW-IYQEGCIKCRiAEDCCLTIVGSlvTSGSKLGLAL-DQNA 2074
Cdd:pfam00652 2 TGRIRNRASGKCLDVPGGSSAGGPVGLYPCHG-SNGNQLWtLTGDGTIRSV-ASDLCLDVGST--ADGAKVVLWPcHPGN 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1696926949 2075 DSQFWSLKSDGR-IYSKlKPNLVLDIKGGTQyDQNHIILNTVSKEKFTQVW 2124
Cdd:pfam00652 78 GNQRWRYDEDGTqIRNP-QSGKCLDVSGAGT-SNGKVILWTCDSGNPNQQW 126
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
431-618 |
3.02e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.54 E-value: 3.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 431 PGAdaeLPESAARDDAVFDDEVAPNAASDNASAEKKVkSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPAS 510
Cdd:PRK07003 377 AGA---VPAPGARAAAAVGASAVPAVTAVTGAAGAAL-APKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAK 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 511 SPTKRKGRSRALEAVPAPPAS--GPRAPAKESPPKRVPDPSPvtkgTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKR 588
Cdd:PRK07003 453 ANARASADSRCDERDAQPPADsgSASAPASDAPPDAAFEPAP----RAAAPSAATPAAVPDARAPAAASREDAPAAAAPP 528
|
170 180 190
....*....|....*....|....*....|
gi 1696926949 589 GPLpnhfNGRAEGGRSRELGRAAGAPGASD 618
Cdd:PRK07003 529 APE----ARPPTPAAAAPAARAGGAAAALD 554
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
257-738 |
8.23e-06 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 460967 [Multi-domain] Cd Length: 531 Bit Score: 50.84 E-value: 8.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 257 SSPGNSSRQEnaETPARSPGEDASPGAGHEQeaflgVRGApGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPP 336
Cdd:pfam03546 27 SSEEESDSEE--ETPAAKTPLQAKPSGKTPQ-----VRAA-SAPAKESPRKGAPPVPPGKTGPAAAQAQAGKPEEDSESS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 337 KGASDLPGEPPAeGAAHTASSAQAdctaRPKG---HAHPAKVLTLDiylSKTEGAQVDEPVVITPRAedcgdwddmekrs 413
Cdd:pfam03546 99 SEESDSDGETPA-AATLTTSPAQV----KPLGknsQVRPASTVGKG---PSGKGANPAPPGKAGSAA------------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 414 sGRRSGRRRGSQKSTDSPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAAldGGVASAASPESkpSPGTK 493
Cdd:pfam03546 158 -PLVQVGKKEEDSESSSEESDSEGEAPPAATQAKPSGKILQVRPASGPAKGAAPAPPQKA--GPVATQVKAER--SKEDS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 494 GQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAK-ESPPKRVPDPSPVTKGTAAESGEEAARAIPR--E 570
Cdd:pfam03546 233 ESSEESSDSEEEAPAAATPAQAKPALKTPQTKASPRKGTPITPTSaKVPPVRVGTPAPWKAGTVTSPACASSPAVARgaQ 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 571 LPVKSSSLLPEIKPEHKRGPLPNhfNGRAEGGRSRELGRAAGAPGAsdadglkprnhfgvGRSTVTTKVTLPAKPKHVEL 650
Cdd:pfam03546 313 RPEEDSSSSEESESEEETAPAAA--VGQAKSVGKGLQGKAASAPTK--------------GPSGQGTAPVPPGKTGPAVA 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 651 NLKTPKNLDSLGNEHNPFSQP--VHKGNTATKISLFENKRTNSSPRHTDIRGQRNTPASSKTFVGRAKLNLAKKAKemeq 728
Cdd:pfam03546 377 QVKAEAQEDSESSEEESDSEEaaATPAQVKASGKTPQAKANPAPTKASSAKGAASAPGKVVAAAAQAKQGSPAKVK---- 452
|
490
....*....|
gi 1696926949 729 PEKKVMPNSP 738
Cdd:pfam03546 453 PPARTPQNSA 462
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
47-550 |
1.45e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.55 E-value: 1.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 47 PHPLPAPAGEARALDVVDG--KYVVRDSqefplHCGESQFFHTTSEALGSLLLESGIFKKSRAQPPEDNRRKPVLGKLGT 124
Cdd:PHA03307 20 FFPRPPATPGDAADDLLSGsqGQLVSDS-----AELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLST 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 125 LFTAGRRRNsrnglESPTRSNAKPLSPKDVVASPKLPERESERSRSQSSqlkqtDTSEEGSPRENPREAEGELPESGGPA 204
Cdd:PHA03307 95 LAPASPARE-----GSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEML-----RPVGSPGPPPAASPPAAGASPAAVAS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 205 APPdaelSPRWSSSAAAVAVQQCHENDSPQLEPleaEGEPFPDATTTAKQLHSSPGNSSRQENAETPARSPGEDASPGAG 284
Cdd:PHA03307 165 DAA----SSRQAALPLSSPEETARAPSSPPAEP---PPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 285 heqeaflgvrGAPGSPTQERPAGGLGEAPNGAPSvcaeEGSLGPRNARSQPPKGASDLPGeppaEGAAHTASSAQADCTA 364
Cdd:PHA03307 238 ----------DSSSSESSGCGWGPENECPLPRPA----PITLPTRIWEASGWNGPSSRPG----PASSSSSPRERSPSPS 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 365 RPKGHAHPAkvltldiylsktegaqvdepvviTPRAEDCGDWDDmekrssgrrsgrrrGSQKSTDSPGADAELPESAARD 444
Cdd:PHA03307 300 PSSPGSGPA-----------------------PSSPRASSSSSS--------------SRESSSSSTSSSSESSRGAAVS 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 445 DAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEA 524
Cdd:PHA03307 343 PGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAA 422
|
490 500
....*....|....*....|....*.
gi 1696926949 525 VPAPPASGPRAPAKESPPKRVPDPSP 550
Cdd:PHA03307 423 SGAFYARYPLLTPSGEPWPGSPPPPP 448
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
430-624 |
2.05e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.87 E-value: 2.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 430 SPGADAELPESAARDDAVFDDEVAPNAASDNAS-AEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPP 508
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAApAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 509 ASSPTKRKGRSRALEAVPAPPASGPRAPAKESP---PKRVPD------------PSPVTKGTAAESGEEAARAIPRELPV 573
Cdd:PRK12323 453 APAAAPAAAARPAAAGPRPVAAAAAAAPARAAPaaaPAPADDdpppweelppefASPAPAQPDAAPAGWVAESIPDPATA 532
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1696926949 574 KSSSLLPEIKPEHKRGPLPnhfngRAEGGRSRelgRAAGAPGASDADGLKP 624
Cdd:PRK12323 533 DPDDAFETLAPAPAAAPAP-----RAAAATEP---VVAPRPPRASASGLPD 575
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
191-863 |
2.07e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.32 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 191 REAEGELPESGGPA------APPDAELSPRWSSSAAAVAVQQ-CHENDSPQ-------LEPLEAE--GEPFPDATTTAKq 254
Cdd:PHA03247 2482 RPAEARFPFAAGAApdpgggGPPDPDAPPAPSRLAPAILPDEpVGEPVHPRmltwirgLEELASDdaGDPPPPLPPAAP- 2560
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 255 lhssPGNSSRQENAETPARSPGEDASPGAGHEQeaflgvrGAPGSPTQERPAGGlgeaPNGAPSVCAEEGSLGPRNARSQ 334
Cdd:PHA03247 2561 ----PAAPDRSVPPPRPAPRPSEPAVTSRARRP-------DAPPQSARPRAPVD----DRGDPRGPAPPSPLPPDTHAPD 2625
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 335 PPKgasdlPGEPPAEGAAHTASSAQADCTARPKGHAHPAKVLTLDIYLSKTEGAQVDEPVV-ITPRAedcgdwddmekrs 413
Cdd:PHA03247 2626 PPP-----PSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQrPRRRA------------- 2687
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 414 sgrrsgrrrgsqkstdSPGADAELPESAARDDAVFDDEVAPNAASdnaSAEKKVKSPRAALDGGVASAASPESKPSPGTK 493
Cdd:PHA03247 2688 ----------------ARPTVGSLTSLADPPPPPPTPEPAPHALV---SATPLPPGPAAARQASPALPAAPAPPAVPAGP 2748
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 494 GQLRGESDRSKQPPPASSPTKRKGRSRALEAVPA--PPASGPRAPAKES-PPKRVPDPSPVTKGTAAESGEEAARAIPRE 570
Cdd:PHA03247 2749 ATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRltRPAVASLSESRESlPSPWDPADPPAAVLAPAAALPPAASPAGPL 2828
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 571 LPVKSSSLLPEIKPehkRGPLPNHF---NGRAEGGRSRELGrAAGAPGASDADGLKPRnhfgvgrstvTTKVTLPAKPKH 647
Cdd:PHA03247 2829 PPPTSAQPTAPPPP---PGPPPPSLplgGSVAPGGDVRRRP-PSRSPAAKPAAPARPP----------VRRLARPAVSRS 2894
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 648 VELNLKTPknlDSLGNEHNPFSQPvhkgntatkislfenkrtnsSPRHTDIRGQRNTPASSKTFVGRAKLNLAKKAKEME 727
Cdd:PHA03247 2895 TESFALPP---DQPERPPQPQAPP--------------------PPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG 2951
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 728 QPEKKVMPNSPQNGVLVKETAIETKVTVSEeeilpatrgmNGDSSENQALGPQPNQDDKAD-VQTDAGCLSEPVASALIP 806
Cdd:PHA03247 2952 AGEPSGAVPQPWLGALVPGRVAVPRFRVPQ----------PAPSREAPASSTPPLTGHSLSrVSSWASSLALHEETDPPP 3021
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 807 VK-DHKLLEKEDSEAADSKSLVLEN--VTDTAQDIPTTVDTKDlPPTAMPKPQHTFSDSQ 863
Cdd:PHA03247 3022 VSlKQTLWPPDDTEDSDADSLFDSDseRSDLEALDPLPPEPHD-PFAHEPDPATPEAGAR 3080
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
438-571 |
4.67e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.56 E-value: 4.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 438 PESAARDDAVfddevAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKG 517
Cdd:PRK14951 366 PAAAAEAAAP-----AEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAA 440
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1696926949 518 RSRALEAVPAPPAsgPRAPAKESPPKRV-PDPSPVTKGTAAESGEEAARAIPREL 571
Cdd:PRK14951 441 APAAVALAPAPPA--QAAPETVAIPVRVaPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
454-573 |
5.87e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 5.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 454 PNAASDNASAEKK-VKSPRAAldggvASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASG 532
Cdd:PRK14951 367 AAAAEAAAPAEKKtPARPEAA-----APAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAA 441
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1696926949 533 P--RAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPV 573
Cdd:PRK14951 442 PaaVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPA 484
|
|
| valS |
PRK14900 |
valyl-tRNA synthetase; Provisional |
438-589 |
6.08e-05 |
|
valyl-tRNA synthetase; Provisional
Pssm-ID: 237855 [Multi-domain] Cd Length: 1052 Bit Score: 48.45 E-value: 6.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 438 PESAARDDAVFDDEVAPNAASDNASAEKKVKSPRA-ALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASsptkrk 516
Cdd:PRK14900 908 ANSARRDTMEIQNEQKPTQDGPAAEAQPAQENTVVeSAEKAVAAVSEAAQQAATAVASGIEKVAEAVRKTVRRS------ 981
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1696926949 517 grsrALEAvPAPPASGPR-----APAKESPPKRVPDPSPVTKGTAAEsgEEAARAIPRELPVKSSSLLPEIKPEHKRG 589
Cdd:PRK14900 982 ----VKKA-AATRAAMKKkvakkAPAKKAAAKKAAAKKAAAKKKVAK--KAPAKKVARKPAAKKAAKKPARKAAGRKA 1052
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-356 |
6.43e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 6.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 2 PLSPPAQGDPGEPSPCRPPKKHTTFHLWRSKKKQQPAPPDCGVFVPHPLPAPAGEARAldvvdgkyVVRDSQEFPLHCGE 81
Cdd:PHA03307 109 PGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDA--------ASSRQAALPLSSPE 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 82 SqffhtTSEALGSLLLESGIFKKSRAQPPEDNRRKPVLGKLGTLFTAGRRRNSRNGLESPTRSNAKPLSPKDVVASPKLP 161
Cdd:PHA03307 181 E-----TARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENEC 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 162 ERESERSRSQSSQLKQTDTSEEGSPRENPREAEGELPESGGPAAPPDAELSPRWSSSAAAVAVQQCHENDSPqlEPLEAE 241
Cdd:PHA03307 256 PLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS--STSSSS 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 242 GEPFPDATTTAKQLHSSPGNSSRQENAETPARSPGEDASPGAGHEqeaflgvRGAPGSPTQERPAGGLGEapngaPSVCA 321
Cdd:PHA03307 334 ESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSP-------AASAGRPTRRRARAAVAG-----RARRR 401
|
330 340 350
....*....|....*....|....*....|....*
gi 1696926949 322 EEGSLGPRNARSQPPKGASDLPGEPPAEGAAHTAS 356
Cdd:PHA03307 402 DATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPS 436
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
441-628 |
1.01e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.86 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 441 AARD--DAVFDDevapnaASDNASAEKKVKSPRAALDGGVASAASPEskPSPGTKGQLRGESDRSKQPPPASSPTKRKGR 518
Cdd:PHA03307 749 SAWDitDALFSN------PSLVPAKLAEALALLEPAEPQRGAGSSPP--VRAEAAFRRPGRLRRSGPAADAASRTASKRK 820
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 519 SRaleavPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNGR 598
Cdd:PHA03307 821 SR-----SHTPDGGSESSGPARPPGAAARPPPARSSESSKSKPAAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAA 895
|
170 180 190
....*....|....*....|....*....|..
gi 1696926949 599 AEGGRSRELGRAAGAP--GASDADGLKPRNHF 628
Cdd:PHA03307 896 PPAGAPAPRPRPAPRVklGPMPPGGPDPRGGF 927
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
438-576 |
1.08e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 47.40 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 438 PESAARDDAVFDDEVAPNAASDNASAEK----KVKSPRAALDGGVASAASPESK--PSPGTKGQLRGESDRSKQPPPASS 511
Cdd:PRK08691 360 PLAAASCDANAVIENTELQSPSAQTAEKetaaKKPQPRPEAETAQTPVQTASAAamPSEGKTAGPVSNQENNDVPPWEDA 439
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1696926949 512 PTKrkgrsralEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARA-IPRELPVKSS 576
Cdd:PRK08691 440 PDE--------AQTAAGTAQTSAKSIQTASEAETPPENQVSKNKAADNETDAPLSeVPSENPIQAT 497
|
|
| beta-trefoil_Ricin_GllA-1 |
cd23454 |
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; ... |
2043-2125 |
1.22e-04 |
|
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; Gellin proteins act as central effectors of wound-induced protoplasmic gelation. They possess ten related N-terminal beta-trefoil domains (Gll-1 to Gll-10) that contribute to distinct gelation-related activities. The beta-trefoil domains show low sequence similarity to members of the functionally diverse ricin B lectin domain family. They are characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain bears a potential sugar binding site. Gellin from M. circinelloides has been called GellinA (also known as GllA). The model corresponds to GllA-1 domain, which is a remote family member of the ricin B-type lectin domain.
Pssm-ID: 467332 [Multi-domain] Cd Length: 136 Bit Score: 43.84 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 2043 IKCrIAEDCCLTIVGSLVTSGSKLGLA--LDQNADSQFWSLKsDGRIYSKlKPNLVLDIKGGTQYDQNHIILNTVS--KE 2118
Cdd:cd23454 5 IKS-SSNGLVLDVEHGSLKSGAKVVLAplKTKDYESQLWRYD-DGYLVNK-ASGLVLDIQGGVVKSGTRLVQSPKKpsKD 81
|
....*..
gi 1696926949 2119 KFTQVWE 2125
Cdd:cd23454 82 ANNQRWG 88
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
430-573 |
1.77e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.09 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 430 SPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPA 509
Cdd:PHA03307 785 GSSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPPPARSSESSKSKPAAAGGR 864
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1696926949 510 SSPTKRKGRSRALEAVPAPPASGPR----APAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPV 573
Cdd:PHA03307 865 ARGKNGRRRPRPPEPRARPGAAAPPkaaaAAPPAGAPAPRPRPAPRVKLGPMPPGGPDPRGGFRRVPP 932
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
441-566 |
2.90e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 44.47 E-value: 2.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 441 AARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTkgqlRGESDRSKQPPPASSPTkRKGRSR 520
Cdd:PRK12495 68 VTEDGAAGDDAGDGAEATAPSDAGSQASPDDDAQPAAEAEAADQSAPPEASS----TSATDEAATDPPATAAA-RDGPTP 142
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1696926949 521 ALEAVPAPPAsgPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARA 566
Cdd:PRK12495 143 DPTAQPATPD--ERRSPRQRPPVSGEPPTPSTPDAHVAGTLQAARE 186
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
448-574 |
3.62e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.04 E-value: 3.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 448 FDDEVAPNAASDNASAEkkvksprAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPtkrkgrsralEAVPA 527
Cdd:PRK12270 33 FADYGPGSTAAPTAAAA-------AAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAA----------AAAAA 95
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1696926949 528 PPASGPRAPAKESPPKRVPDPSPVTKGTAAESGE--EAARAIP-----RELPVK 574
Cdd:PRK12270 96 PAAPPAAAAAAAPAAAAVEDEVTPLRGAAAAVAKnmDASLEVPtatsvRAVPAK 149
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
188-372 |
5.19e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 5.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 188 ENPREAEGELPESGGPAAPPDAELSPRWSSSAAAVAVQQchendspQLEPLEAEGEPFPDATTTAKQLHSSPGNSSRQEN 267
Cdd:PHA03307 759 SNPSLVPAKLAEALALLEPAEPQRGAGSSPPVRAEAAFR-------RPGRLRRSGPAADAASRTASKRKSRSHTPDGGSE 831
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 268 AETPARSPGEDASPgagheqeafLGVRGAPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPPKGASDLPGEPP 347
Cdd:PHA03307 832 SSGPARPPGAAARP---------PPARSSESSKSKPAAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPA 902
|
170 180
....*....|....*....|....*
gi 1696926949 348 AEGAAhtasSAQADCTARPKGHAHP 372
Cdd:PHA03307 903 PRPRP----APRVKLGPMPPGGPDP 923
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
179-320 |
5.47e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 44.58 E-value: 5.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 179 DTSEEGSPRENPREAEGELPESGGPAAPPDAELSPRWSSSAAAvavQQCHEnDSPQlEPLEAEGEPFPDA-------TTT 251
Cdd:PHA03169 125 GSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFL---QPSHE-DSPE-EPEPPTSEPEPDSpgppqseTPT 199
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1696926949 252 AKQLHSSPGNSSRQENAETPARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPA---GGLGEA--PNGAPSVC 320
Cdd:PHA03169 200 SSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHEDEPTEPEREGPPFPGHRSHSytvVGWKPStrPGGVPKLC 273
|
|
| beta-trefoil_Ricin_SCDase |
cd23456 |
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide ... |
1997-2104 |
7.06e-04 |
|
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide N-deacylase (SCDase) and similar proteins; SCDase (EC 3.5.1.69) is an enzyme which hydrolyzes the N-acyl linkage between fatty acid and sphingosine in ceramide of various glycosphingolipids and sphingomyelin. Shewanella algae SCDase contains two ricin B-type lectin domains at its C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467334 [Multi-domain] Cd Length: 122 Bit Score: 41.57 E-value: 7.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1997 YFRLRNKATGLFMSTNGNleDLKLLRIQVMEDVGADDQIWIYQE-GCIKCRIAEDCCLTiVGSLVTSGSKLGLALDQNAD 2075
Cdd:cd23456 2 YFQLKSQASGLCLDVSGG--ATNGANVVVYDCNNSNSQKWYYDAtGRLHSKANPGKCLD-AGGENSNGANVVLWACNDSA 78
|
90 100
....*....|....*....|....*....
gi 1696926949 2076 SQFWSLkSDGRIYSKLKPNLVLDIKGGTQ 2104
Cdd:cd23456 79 NQRWDF-DGNFIRSRNNTNLALDAYGSQG 106
|
|
| beta-trefoil_Ricin_HA17-like |
cd23445 |
ricin B-type lectin domain, beta-trefoil fold, found in Clostridium botulinum hemagglutinating ... |
2023-2113 |
8.35e-04 |
|
ricin B-type lectin domain, beta-trefoil fold, found in Clostridium botulinum hemagglutinating proteins, HA17 and HA33, and similar proteins; The subfamily includes Clostridium botulinum hemagglutinating proteins HA17 and HA33, Lysinibacillus sphaericus mosquitocidal toxin (MTX) and Pieris brassicae pierisin. The hemagglutinin (HA) component of the progenitor toxin protects the structural integrity of the neurotoxin. It may increase internalization of the neurotoxin into the bloodstream of the host. The hemagglutinin complex, composed of HA-70 (also known as HA3), HA-33 (also known as HA1) and HA-17 (also known as HA2), agglutinates erythrocytes, whereas the individual components do not. HA-33 is involved in recognition of cell-surface carbohydrates. HA-17 and HA-70 are involved in paracellular barrier disruption by E-cadherin binding. MTX acts as an ADP-ribosyl transferase. Pierisin, also called NAD--DNA ADP-ribosyltransferase, pierisin-2, or pierisin-B, catalyzes the ADP ribosylation of double-stranded DNA by targeting the N2 amino group of dG residues. It induces apoptosis in a range of human cell lines. Members of this subfamily contain at least one ricin B-type lectin domain with a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry.
Pssm-ID: 467323 [Multi-domain] Cd Length: 133 Bit Score: 41.54 E-value: 8.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 2023 IQVMEDVGADDQIWI---------YQegcIKCRIAEDCCLTIVGSlvtSGSKLGLALDQNADSQFWSLK--SDGR--IYS 2089
Cdd:cd23445 24 VVLWDNNGGNNQKWRfeydsgknaYQ---IKNLDNTNLVLAWNSS---SSNNVFASTNTSKDEQYWKLEeaGDGYyiIKN 97
|
90 100
....*....|....*....|....
gi 1696926949 2090 KLKPNLVLDIKGGTQYDQNHIILN 2113
Cdd:cd23445 98 YADPNLVLDVEGSNTANGTNIIVY 121
|
|
| beta-trefoil_Ricin_SCDase |
cd23456 |
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide ... |
2048-2108 |
9.71e-04 |
|
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide N-deacylase (SCDase) and similar proteins; SCDase (EC 3.5.1.69) is an enzyme which hydrolyzes the N-acyl linkage between fatty acid and sphingosine in ceramide of various glycosphingolipids and sphingomyelin. Shewanella algae SCDase contains two ricin B-type lectin domains at its C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467334 [Multi-domain] Cd Length: 122 Bit Score: 41.19 E-value: 9.71e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1696926949 2048 AEDCCLTIVGSlVTSGSKLGLALDQNADSQFWSLKSDGRIYSKLKPNLVLDIKGGTQYDQN 2108
Cdd:cd23456 9 ASGLCLDVSGG-ATNGANVVVYDCNNSNSQKWYYDATGRLHSKANPGKCLDAGGENSNGAN 68
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
302-642 |
1.16e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 44.29 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 302 QERPAGGLGE---APNGAPSVcAEEGSLGPRNARSQPPKGASDLPGEPPAegaahtaSSAQADCTARPKGHAHPAKVLTL 378
Cdd:PHA03378 562 QLLPAPGLGPlqiQPLTSPTT-SQLASSAPSYAQTPWPVPHPSQTPEPPT-------TQSHIPETSAPRQWPMPLRPIPM 633
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 379 diYLSKTEGAQVDEPVVITPraedcgDWDDMEKRSSGRRSGRRRGSQKSTDSP-GADAELPESAARDDAVfDDEVAPNAA 457
Cdd:PHA03378 634 --RPLRMQPITFNVLVFPTP------HQPPQVEITPYKPTWTQIGHIPYQPSPtGANTMLPIQWAPGTMQ-PPPRAPTPM 704
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 458 SDNASAEKKVKSPRAALDGGVASAASPESKPSPgtkgqlrgESDRSKQPPPASSPTKRKGRSRALEAVPaPPASGPRAPA 537
Cdd:PHA03378 705 RPPAAPPGRAQRPAAATGRARPPAAAPGRARPP--------AAAPGRARPPAAAPGRARPPAAAPGRAR-PPAAAPGAPT 775
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 538 KESPPKrVPdPSPVTKGTAAESGEEAARAIPRELPVKSSSLLPEIKPehKRGPLPNHFNGRAEGGRSRELGRAAGAPGAs 617
Cdd:PHA03378 776 PQPPPQ-AP-PAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGP--TKQILRQLLTGGVKRGRPSLKKPAALERQA- 850
|
330 340
....*....|....*....|....*
gi 1696926949 618 dADGLKPRNHFGVGRSTVTTKVTLP 642
Cdd:PHA03378 851 -AAGPTPSPGSGTSDKIVQAPVFYP 874
|
|
| beta-trefoil_Ricin_DCDC1 |
cd23427 |
ricin B-type lectin domain, beta-trefoil fold, found in doublecortin domain-containing protein ... |
2034-2127 |
1.22e-03 |
|
ricin B-type lectin domain, beta-trefoil fold, found in doublecortin domain-containing protein 1 (DCDC1) and similar proteins; DCDC1, also called doublecortin domain-containing 5 protein (DCDC5), is a microtubule-binding protein which plays an important role in mediating dynein-dependent transport of RAB8A-positive vesicles to the midbody during cytokinesis. In addition to doublecortin-like domains, DCDC1 may also contain a ricin B-type lectin domain in the middle region. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a putative sugar-binding pocket.
Pssm-ID: 467305 Cd Length: 146 Bit Score: 41.52 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 2034 QIWIYQEGCIKCRIAEDCCLTIVGSLVTSGSKLGLALDQNAD-SQFWSLKSDGRIYSKLKPNLVLDIK------GGTQ-- 2104
Cdd:cd23427 38 QQFVFEDGFISCCSNPNLVLGVQGSELGRGAEVVLVKKKPDDiNQRWILREDGHIMSKPNYDLVLTVSmpsttpGDSSsp 117
|
90 100
....*....|....*....|....*...
gi 1696926949 2105 --YDQNHIILNTVSKEKF---TQVWEAM 2127
Cdd:cd23427 118 lsYIGCAVILQKYKGYSYgraNQKWHWD 145
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
473-619 |
1.24e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 473 ALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAKESPPKRVPDPspvt 552
Cdd:PRK07003 357 AFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAP---- 432
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1696926949 553 kgtaAESGEEAARAIPRELPVKSSSLLP----EIKPEHKRGPLPNHFNGRAEGGRSRELGRAAGAPGASDA 619
Cdd:PRK07003 433 ----PATADRGDDAADGDAPVPAKANARasadSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAP 499
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
329-650 |
1.49e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 329 RNARSQPPKGASDLPGEPP--AEGAAHTASSAQADCTARPK---GHAHPAKVLTLDIYLSKTEGAQVDEPVVITP----R 399
Cdd:PHA03247 241 RVVISHPLRGDIAAPAPPPvvGEGADRAPETARGATGPPPPpeaAAPNGAAAPPDGVWGAALAGAPLALPAPPDPpppaP 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 400 AEDCGDWDDMEKRSSGRRSGRRRGSQKSTDSPGADAEL--PESAARDdaVFDDEVAPNAASDNASAEK---KVKSPRAAL 474
Cdd:PHA03247 321 AGDAEEEDDEDGAMEVVSPLPRPRQHYPLGFPKRRRPTwtPPSSLED--LSAGRHHPKRASLPTRKRRsarHAATPFARG 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 475 DGG----VASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPA-KESPPK------ 543
Cdd:PHA03247 399 PGGddqtRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDpDDATRKaldalr 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 544 --RVPDPS-----------PVTKGTAAESGEEAArAIPRELPVKSSSLLPEIkpehkRGPLPNH----------FNGRA- 599
Cdd:PHA03247 479 erRPPEPPgadlaellgrhPDTAGTVVRLAAREA-AIAREVAECSRLTINAL-----RSPFPASpgllqhcvifLFERVl 552
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1696926949 600 ----EGGRSRELGRAAGAPGASDAD---GLKPRNHfGVGRSTVTTKVTLPAKPKHVEL 650
Cdd:PHA03247 553 afliENGARTHAGAGAEGPAAALLDltlSLLPRRT-AVGDFLASTRMTLADVAAHLPL 609
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
184-357 |
2.47e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.91 E-value: 2.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 184 GSPRENPREAEGELPESGGPAAPPDAELSPRWSSSAAAVAVQQCHENDSPQLEPLEAEGEPFPDATTTAKQLHSSPGNSS 263
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 264 RQENAETPARSPGEDASPGAGHEQEAflgvRGAPGSPTQERPAGGLGEAPNGAPSVCAeegslgPRNARSQPPkgASDLP 343
Cdd:PRK07003 463 CDERDAQPPADSGSASAPASDAPPDA----AFEPAPRAAAPSAATPAAVPDARAPAAA------SREDAPAAA--APPAP 530
|
170
....*....|....
gi 1696926949 344 GEPPAEGAAHTASS 357
Cdd:PRK07003 531 EARPPTPAAAAPAA 544
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
185-366 |
2.79e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 185 SPRENPREAEGELPESGGPAAPPDAELSPRWSSSAAAVAVQQchendspQLEPLEAEGEPFPDATTTAkqlhsSPGNSSR 264
Cdd:PRK12323 396 APAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAAR-------QASARGPGGAPAPAPAPAA-----APAAAAR 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 265 qeNAETPARSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPAGGLGEAP--NGAPSVCAEEGSLGPRNARSQPPKGASDL 342
Cdd:PRK12323 464 --PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPApaQPDAAPAGWVAESIPDPATADPDDAFETL 541
|
170 180
....*....|....*....|....
gi 1696926949 343 PGEPPAEGAAHTASSAQADCTARP 366
Cdd:PRK12323 542 APAPAAAPAPRAAAATEPVVAPRP 565
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
487-588 |
3.64e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.39 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 487 KPSPGTKGQLRGESdRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARA 566
Cdd:PRK14951 365 KPAAAAEAAAPAEK-KTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPA 443
|
90 100
....*....|....*....|..
gi 1696926949 567 IPRELPVKSSSLLPEIKPEHKR 588
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIPVR 465
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
430-625 |
3.82e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.47 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 430 SPGADAELPESAARDDAVFDDEVAPNAASDNASAEKKVKSPRAAldgGVASAASPESKPSPGTKGqlrgesdrsKQPPPA 509
Cdd:PHA03307 129 SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA---ALPLSSPEETARAPSSPP---------AEPPPS 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 510 SSPTKRKGRSRAleavPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAES-------GEEAARAIPRELPVKSSSLLPEI 582
Cdd:PHA03307 197 TPPAAASPRPPR----RSSPISASASSPAPAPGRSAADDAGASSSDSSSSessgcgwGPENECPLPRPAPITLPTRIWEA 272
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1696926949 583 KPEHKRGPLPNHfngRAEGGRSRELGRAAgAPGASDADGLKPR 625
Cdd:PHA03307 273 SGWNGPSSRPGP---ASSSSSPRERSPSP-SPSSPGSGPAPSS 311
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
472-583 |
4.94e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.72 E-value: 4.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 472 AALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPASSPTKRKGRSRAL-EAVPAPPASGPRAPAKESPPKRVPDPSP 550
Cdd:PRK14950 358 ALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATpPPVPPRPVAPPVPHTPESAPKLTRAAIP 437
|
90 100 110
....*....|....*....|....*....|...
gi 1696926949 551 VtkGTAAESGEEAARAIPRELPVKSSSLLPEIK 583
Cdd:PRK14950 438 V--DEKPKYTPPAPPKEEEKALIADGDVLEQLE 468
|
|
| beta-trefoil_Ricin_EW29-like |
cd23449 |
ricin B-type lectin domain, beta-trefoil fold, found in Lumbricus terrestris 29-kDa ... |
1997-2111 |
5.28e-03 |
|
ricin B-type lectin domain, beta-trefoil fold, found in Lumbricus terrestris 29-kDa galactose-binding lectin (EW29) and similar proteins; EW29 is a galactose-binding lectin from the earthworm Lumbricus terrestris. It contains two ricin B-type lectin domains with a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. The second ricin B-type lectin domain may harbor two sugar-binding pockets in subdomains alpha and gamma. EW29 uses these two sugar-binding sites for its function as a single domain-type hemagglutinin.
Pssm-ID: 467327 [Multi-domain] Cd Length: 128 Bit Score: 39.20 E-value: 5.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 1997 YFRLRNKATGLFMS-TNGNLEDLKLLRIQVMEDVGADDQIWiYQ---EGCIKCRiAEDCCLTIVGS--LVTSgsklglAL 2070
Cdd:cd23449 2 YFYIKSKLNGKVLDvEGANAKPGAKVIMWEKKGGAEDNQLW-YEdevTGTIRSK-LNDFCLDASGDkgLILN------PY 73
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1696926949 2071 DQNADSQFWsLKSDGRIYSKLKPNLVLDIKGGTQYDQNHII 2111
Cdd:cd23449 74 DPSNPKQQW-KISGNKIQNRSNPDNVLDIKGGSKDDGARLC 113
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
499-580 |
5.55e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 41.15 E-value: 5.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 499 ESDRSKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPAK--ESPPKRVPdpsPVTKGTAAESGEEAARAIPRELPVKSS 576
Cdd:PHA03381 80 EDERPADPRPSRRPHAQPEASGPGPARGARGPAGSRGRGRraESPSPRDP---PNPKGASAPRGRKSACADSAALLDAPA 156
|
....
gi 1696926949 577 SLLP 580
Cdd:PHA03381 157 PAAP 160
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
176-337 |
5.64e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 41.49 E-value: 5.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 176 KQTDTSEEGSPREnprEAEGELPESGGPAAPPDAELSPRWSSSAAAVAVQQCHENDSPQLEPLEAEGEPFPDATTTAKQL 255
Cdd:PHA03169 86 ERGQGGPSGSGSE---SVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQ 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 256 HSSPGNSSRQENAETPARSPGEDASPGAGHEQEAFLGVRGAPGSPTQE-----RPAGGLGEAPNGAPSVCAEEGSLGPRN 330
Cdd:PHA03169 163 PSSFLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEpgepqSPTPQQAPSPNTQQAVEHEDEPTEPER 242
|
....*..
gi 1696926949 331 ARSQPPK 337
Cdd:PHA03169 243 EGPPFPG 249
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
425-550 |
6.25e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 41.29 E-value: 6.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 425 QKSTDSPGADAELPEsAARDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSK 504
Cdd:NF040712 208 EPADARPEEVEPAPA-AEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPAPGAA 286
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1696926949 505 QPPPASSPTkrkgrsralEAVPAPPAsGPRAPAKESPPKRVPDPSP 550
Cdd:NF040712 287 ETPEAAEPP---------APAPAAPA-APAAPEAEEPARPEPPPAP 322
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
191-361 |
7.12e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 41.12 E-value: 7.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 191 REAEGELPESG----GPAAPPDAELSPRWSSSAAAVAV-----QQCHENDSPQLEPLEAEGEPFPDATTTAKQLHSSPGN 261
Cdd:PRK13108 279 REAPGALRGSEyvvdEALEREPAELAAAAVASAASAVGpvgpgEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 262 SS-RQENAETPA---RSPGEDASPGAGHEQEAFLGVRGAPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPRNARSQPPk 337
Cdd:PRK13108 359 STpAVEETSEADierEQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGP- 437
|
170 180
....*....|....*....|....
gi 1696926949 338 gaSDLPGEPPAEGAAHTASSAQAD 361
Cdd:PRK13108 438 --GDDPAEPDGIRRQDDFSSRRRR 459
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
430-579 |
9.65e-03 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 41.39 E-value: 9.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 430 SPGADAELPEsaarDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPA 509
Cdd:PLN03237 1250 APAAAKEKEE----EDEILDLKDRLAAYNLDSAPAQSAKMEETVKAVPARRAAARKKPLASVSVISDSDDDDDDFAVEVS 1325
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1696926949 510 SSP-TKRKGRSRALEAVPaPPASGPRAPAKESPPKRVPDPSPVTK--------GTAAESGEEAARAIPreLPVKSSSLL 579
Cdd:PLN03237 1326 LAErLKKKGGRKPAAANK-KAAKPPAAAKKRGPATVQSGQKLLTEmlkpaeaiGISPEKKVRKMRASP--FNKKSGSVL 1401
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
478-595 |
9.87e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 41.19 E-value: 9.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1696926949 478 VASAASPESKPSPGtkGQLRGESDRSKQPPPASsPTKRkGRSRALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAA 557
Cdd:PHA03377 526 VTQPAKPHRKVQDG--FQRSGRRQKRATPPKVS-PSDR-GPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQA 601
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1696926949 558 ESGEEAARAIPRELPVKSSS-----------LLPEIKPEHKRGPLPNHF 595
Cdd:PHA03377 602 KCKDGPPASGPHEKQPPSSAprdmapsvvrmFLRERLLEQSTGPKPKSF 650
|
|
| |
