NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1634229889|ref|NP_001357275|]
View 

A-kinase anchor protein 12 isoform 3 [Homo sapiens]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
rne super family cl35953
ribonuclease E; Reviewed
778-980 3.85e-08

ribonuclease E; Reviewed


The actual alignment was detected with superfamily member PRK10811:

Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 58.51  E-value: 3.85e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  778 ELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEPLEQVEAEAALLTEEVlereVIAEEEPPTVTEPLPENREARG 857
Cdd:PRK10811   857 EQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV----VVETTHPEVIAAPVTEQPQVIT 932
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  858 DTVVSEAELTPEAVTAAETAgplgAEEGTEASAAEETTEMVSAVSQLTDSPDttEEATPVQEVEGGVPDIEEQERRTQEV 937
Cdd:PRK10811   933 ESDVAVAQEVAEHAEPVVEP----QDETADIEEAAETAEVVVAEPEVVAQPA--APVVAEVAAEVETVTAVEPEVAPAQV 1006
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1634229889  938 LQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASG 980
Cdd:PRK10811  1007 PEATVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKG 1049
WSK pfam03832
WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in ...
500-528 3.91e-06

WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in protein kinase A anchoring proteins.


:

Pssm-ID: 461069 [Multi-domain]  Cd Length: 29  Bit Score: 44.94  E-value: 3.91e-06
                           10        20
                   ....*....|....*....|....*....
gi 1634229889  500 EGVTPWASFKKMVTPKKRVRRPSESDKED 528
Cdd:pfam03832    1 EPVSAWASFKRLVTPRKRSKSSKEQKPEE 29
PTZ00121 super family cl31754
MAEBL; Provisional
206-855 2.04e-05

MAEBL; Provisional


The actual alignment was detected with superfamily member PTZ00121:

Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 49.75  E-value: 2.04e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  206 TSFRKPKEDEVEASEKKKEQEPEKVDT---EEDGKAEVA---SEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQ 279
Cdd:PTZ00121  1082 DAKEDNRADEATEEAFGKAEEAKKTETgkaEEARKAEEAkkkAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  280 VSGSQGPSEEKPAPLATEVFDEKIEVHQ-EEVVAEVHVSTVEE--------RTEE-QKTEVEETAGSVPAEELVEMDAEP 349
Cdd:PTZ00121  1162 DARKAEEARKAEDAKKAEAARKAEEVRKaEELRKAEDARKAEAarkaeeerKAEEaRKAEDAKKAEAVKKAEEAKKDAEE 1241
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  350 ---QEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLS---KPPEGVVSEVEMLSSQERMKV-----------QGSPLK 412
Cdd:PTZ00121  1242 akkAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAdelKKAEEKKKADEAKKAEEKKKAdeakkkaeeakKADEAK 1321
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  413 KLFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGAT 492
Cdd:PTZ00121  1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAE 1401
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  493 SDGEKKREGVTPWASFKKMVTPKKR---VRRPSESDKEDElDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPKRKVD 569
Cdd:PTZ00121  1402 EDKKKADELKKAAAAKKKADEAKKKaeeKKKADEAKKKAE-EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAE 1480
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  570 TSVSWEALICVGSSKKRARRGSSSDEEGGPKA----MGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSP 645
Cdd:PTZ00121  1481 EAKKADEAKKKAEEAKKKADEAKKAAEAKKKAdeakKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA 1560
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  646 TE---GEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHSTPDTEPGKEESWVSIK-----KFIPGRRKKRPDGK 717
Cdd:PTZ00121  1561 EEkkkAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKaeelkKAEEEKKKVEQLKK 1640
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  718 QEQAPVEDAGPTGANEDDSDVPAVvplSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGTRA 797
Cdd:PTZ00121  1641 KEAEEKKKAEELKKAEEENKIKAA---EEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
                          650       660       670       680       690       700
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1634229889  798 ATII----EERSPSWISASVTEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREA 855
Cdd:PTZ00121  1718 AEELkkaeEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEA 1779
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
778-980 3.85e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 58.51  E-value: 3.85e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  778 ELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEPLEQVEAEAALLTEEVlereVIAEEEPPTVTEPLPENREARG 857
Cdd:PRK10811   857 EQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV----VVETTHPEVIAAPVTEQPQVIT 932
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  858 DTVVSEAELTPEAVTAAETAgplgAEEGTEASAAEETTEMVSAVSQLTDSPDttEEATPVQEVEGGVPDIEEQERRTQEV 937
Cdd:PRK10811   933 ESDVAVAQEVAEHAEPVVEP----QDETADIEEAAETAEVVVAEPEVVAQPA--APVVAEVAAEVETVTAVEPEVAPAQV 1006
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1634229889  938 LQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASG 980
Cdd:PRK10811  1007 PEATVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKG 1049
WSK pfam03832
WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in ...
500-528 3.91e-06

WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in protein kinase A anchoring proteins.


Pssm-ID: 461069 [Multi-domain]  Cd Length: 29  Bit Score: 44.94  E-value: 3.91e-06
                           10        20
                   ....*....|....*....|....*....
gi 1634229889  500 EGVTPWASFKKMVTPKKRVRRPSESDKED 528
Cdd:pfam03832    1 EPVSAWASFKRLVTPRKRSKSSKEQKPEE 29
PTZ00121 PTZ00121
MAEBL; Provisional
206-855 2.04e-05

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 49.75  E-value: 2.04e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  206 TSFRKPKEDEVEASEKKKEQEPEKVDT---EEDGKAEVA---SEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQ 279
Cdd:PTZ00121  1082 DAKEDNRADEATEEAFGKAEEAKKTETgkaEEARKAEEAkkkAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  280 VSGSQGPSEEKPAPLATEVFDEKIEVHQ-EEVVAEVHVSTVEE--------RTEE-QKTEVEETAGSVPAEELVEMDAEP 349
Cdd:PTZ00121  1162 DARKAEEARKAEDAKKAEAARKAEEVRKaEELRKAEDARKAEAarkaeeerKAEEaRKAEDAKKAEAVKKAEEAKKDAEE 1241
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  350 ---QEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLS---KPPEGVVSEVEMLSSQERMKV-----------QGSPLK 412
Cdd:PTZ00121  1242 akkAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAdelKKAEEKKKADEAKKAEEKKKAdeakkkaeeakKADEAK 1321
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  413 KLFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGAT 492
Cdd:PTZ00121  1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAE 1401
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  493 SDGEKKREGVTPWASFKKMVTPKKR---VRRPSESDKEDElDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPKRKVD 569
Cdd:PTZ00121  1402 EDKKKADELKKAAAAKKKADEAKKKaeeKKKADEAKKKAE-EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAE 1480
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  570 TSVSWEALICVGSSKKRARRGSSSDEEGGPKA----MGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSP 645
Cdd:PTZ00121  1481 EAKKADEAKKKAEEAKKKADEAKKAAEAKKKAdeakKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA 1560
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  646 TE---GEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHSTPDTEPGKEESWVSIK-----KFIPGRRKKRPDGK 717
Cdd:PTZ00121  1561 EEkkkAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKaeelkKAEEEKKKVEQLKK 1640
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  718 QEQAPVEDAGPTGANEDDSDVPAVvplSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGTRA 797
Cdd:PTZ00121  1641 KEAEEKKKAEELKKAEEENKIKAA---EEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
                          650       660       670       680       690       700
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1634229889  798 ATII----EERSPSWISASVTEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREA 855
Cdd:PTZ00121  1718 AEELkkaeEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEA 1779
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
778-980 3.85e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 58.51  E-value: 3.85e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  778 ELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEPLEQVEAEAALLTEEVlereVIAEEEPPTVTEPLPENREARG 857
Cdd:PRK10811   857 EQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV----VVETTHPEVIAAPVTEQPQVIT 932
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  858 DTVVSEAELTPEAVTAAETAgplgAEEGTEASAAEETTEMVSAVSQLTDSPDttEEATPVQEVEGGVPDIEEQERRTQEV 937
Cdd:PRK10811   933 ESDVAVAQEVAEHAEPVVEP----QDETADIEEAAETAEVVVAEPEVVAQPA--APVVAEVAAEVETVTAVEPEVAPAQV 1006
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1634229889  938 LQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASG 980
Cdd:PRK10811  1007 PEATVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKG 1049
WSK pfam03832
WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in ...
500-528 3.91e-06

WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in protein kinase A anchoring proteins.


Pssm-ID: 461069 [Multi-domain]  Cd Length: 29  Bit Score: 44.94  E-value: 3.91e-06
                           10        20
                   ....*....|....*....|....*....
gi 1634229889  500 EGVTPWASFKKMVTPKKRVRRPSESDKED 528
Cdd:pfam03832    1 EPVSAWASFKRLVTPRKRSKSSKEQKPEE 29
rne PRK10811
ribonuclease E; Reviewed
808-978 4.68e-06

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 51.58  E-value: 4.68e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  808 WISASVTEP-----LEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREARGDTVVSEAELTPEAVTAAETAGPLGA 882
Cdd:PRK10811   842 WIRYPVVRPqdvqvEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIA 921
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  883 EEGTEASAAEETTEMVSAVSqltdspdTTEEATPVQEVEGGVPDIEEQERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQ 962
Cdd:PRK10811   922 APVTEQPQVITESDVAVAQE-------VAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETV 994
                          170
                   ....*....|....*.
gi 1634229889  963 PVQrAEAERPEEQAEA 978
Cdd:PRK10811   995 TAV-EPEVAPAQVPEA 1009
PTZ00121 PTZ00121
MAEBL; Provisional
206-855 2.04e-05

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 49.75  E-value: 2.04e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  206 TSFRKPKEDEVEASEKKKEQEPEKVDT---EEDGKAEVA---SEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQ 279
Cdd:PTZ00121  1082 DAKEDNRADEATEEAFGKAEEAKKTETgkaEEARKAEEAkkkAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  280 VSGSQGPSEEKPAPLATEVFDEKIEVHQ-EEVVAEVHVSTVEE--------RTEE-QKTEVEETAGSVPAEELVEMDAEP 349
Cdd:PTZ00121  1162 DARKAEEARKAEDAKKAEAARKAEEVRKaEELRKAEDARKAEAarkaeeerKAEEaRKAEDAKKAEAVKKAEEAKKDAEE 1241
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  350 ---QEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLS---KPPEGVVSEVEMLSSQERMKV-----------QGSPLK 412
Cdd:PTZ00121  1242 akkAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAdelKKAEEKKKADEAKKAEEKKKAdeakkkaeeakKADEAK 1321
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  413 KLFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGAT 492
Cdd:PTZ00121  1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAE 1401
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  493 SDGEKKREGVTPWASFKKMVTPKKR---VRRPSESDKEDElDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPKRKVD 569
Cdd:PTZ00121  1402 EDKKKADELKKAAAAKKKADEAKKKaeeKKKADEAKKKAE-EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAE 1480
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  570 TSVSWEALICVGSSKKRARRGSSSDEEGGPKA----MGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSP 645
Cdd:PTZ00121  1481 EAKKADEAKKKAEEAKKKADEAKKAAEAKKKAdeakKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA 1560
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  646 TE---GEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHSTPDTEPGKEESWVSIK-----KFIPGRRKKRPDGK 717
Cdd:PTZ00121  1561 EEkkkAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKaeelkKAEEEKKKVEQLKK 1640
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  718 QEQAPVEDAGPTGANEDDSDVPAVvplSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGTRA 797
Cdd:PTZ00121  1641 KEAEEKKKAEELKKAEEENKIKAA---EEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
                          650       660       670       680       690       700
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1634229889  798 ATII----EERSPSWISASVTEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREA 855
Cdd:PTZ00121  1718 AEELkkaeEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEA 1779
PTZ00121 PTZ00121
MAEBL; Provisional
5-632 2.72e-05

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 49.37  E-value: 2.72e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889    5 RDSEDVSKrdsdKEMATKSAVVHDITDDGQEETPEIIEQIPSSES--NLEELTQPTESQANDIGFKKVFKFVGFKFTVKK 82
Cdd:PTZ00121  1194 RKAEDARK----AEAARKAEEERKAEEARKAEDAKKAEAVKKAEEakKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQ 1269
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889   83 DKTEKPDTVQLLTVKKDEGEGAAGAGDHKDPSLGAGEAASKESEPKQSTE---KPEETLKREQS---HAEISPPAESGQA 156
Cdd:PTZ00121  1270 AAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEakkKAEEAKKKADAakkKAEEAKKAAEAAK 1349
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  157 VEECKEEGEEKQEKEPSKSAESPTSPVTSETGSTFKKFFTQGWAG-WRKKTSFRKPKEDEV-EASEKKKEQEPEKVDTEE 234
Cdd:PTZ00121  1350 AEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADeAKKKAEEDKKKADELkKAAAAKKKADEAKKKAEE 1429
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  235 DGKAEVASEKltASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDE-KIEVHQEEVVAE 313
Cdd:PTZ00121  1430 KKKADEAKKK--AEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEaKKKADEAKKAAE 1507
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  314 VHVSTVEERTEEQKTEVEETAGSVPAEELVEMdAEPQEAEPAKELVKLKETCVSGE-DPTQGADLSPDEKVLSKPPEGVV 392
Cdd:PTZ00121  1508 AKKKADEAKKAEEAKKADEAKKAEEAKKADEA-KKAEEKKKADELKKAEELKKAEEkKKAEEAKKAEEDKNMALRKAEEA 1586
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  393 SEVEMLSSQERMKVQGSplKKLFTSTGLKKLSGKKQKGKRGGGDEEsgEHTQVPADSPDSQEEQKGESSASSPEEPEEIT 472
Cdd:PTZ00121  1587 KKAEEARIEEVMKLYEE--EKKMKAEEAKKAEEAKIKAEELKKAEE--EKKKVEQLKKKEAEEKKKAEELKKAEEENKIK 1662
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  473 CLEKGLAEVQQDGEAEEG--ATSDGEKKREGVTPWASFKKMVTPKKRvRRPSESDKEDELDKVKSATLSSTESTASEMQE 550
Cdd:PTZ00121  1663 AAEEAKKAEEDKKKAEEAkkAEEDEKKAAEALKKEAEEAKKAEELKK-KEAEEKKKAEELKKAEEENKIKAEEAKKEAEE 1741
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  551 EMKGSVEEPKPEEPKRKVDTSVSWEALICVGSSKKRarrgSSSDEEGGPKAMGGDHQKADEAGKDKETGTDGILAGSQEH 630
Cdd:PTZ00121  1742 DKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEK----EAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEG 1817

                   ..
gi 1634229889  631 DP 632
Cdd:PTZ00121  1818 NL 1819
rne PRK10811
ribonuclease E; Reviewed
741-902 3.74e-05

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 48.88  E-value: 3.74e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  741 VVPLSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSK-----ELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTE 815
Cdd:PRK10811   847 VVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVsapvvEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTE 926
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  816 PLEQVEAEAAllteeVLEREVIAEEEPptVTEPLPEnreargDTVVSEAELTPEAVTAAETAGPLGAEEGTEASAAEETT 895
Cdd:PRK10811   927 QPQVITESDV-----AVAQEVAEHAEP--VVEPQDE------TADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVET 993

                   ....*..
gi 1634229889  896 EMVSAVS 902
Cdd:PRK10811   994 VTAVEPE 1000
rne PRK10811
ribonuclease E; Reviewed
211-359 3.15e-04

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 45.80  E-value: 3.15e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  211 PKEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQEPAESAHEprlsaeyEKVELPSEEQVSGSQGPSEEK 290
Cdd:PRK10811   850 PQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVV-------AEPQPEEVVVVETTHPEVIAA 922
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1634229889  291 PAPLATEVFDEKIEVHQEEVVAEVHVSTVEERTEEQKTEVEETAGSVPAEELVEMDAEPQEAEPAKELV 359
Cdd:PRK10811   923 PVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEV 991
PTZ00121 PTZ00121
MAEBL; Provisional
486-1026 8.01e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 44.36  E-value: 8.01e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  486 EAEEGATSDGEKKREGVTPWASFKKmvtPKKRVRRPSESDKEDELDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPK 565
Cdd:PTZ00121  1213 KAEEARKAEDAKKAEAVKKAEEAKK---DAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEK 1289
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  566 RKVDTSVSWEALICVGSSKKRARRGSSSDEegGPKAMGGDHQKADEAGKDKETGTDGILAGSQEH----DPGQGSSSPEQ 641
Cdd:PTZ00121  1290 KKADEAKKAEEKKKADEAKKKAEEAKKADE--AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAeaaaDEAEAAEEKAE 1367
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  642 AGSPTEGEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHSTPDTEPGKEESwvsiKKFIPGRRKKRPDGKQEQA 721
Cdd:PTZ00121  1368 AAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAK----KKAEEKKKADEAKKKAEEA 1443
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  722 PVEDAGPTGANEDDSDVPAVVPLSEYDAVEREKMEAQQAQKSAEQpeQKAATEVSKELSESQVHMMAAAVADGTRAATii 801
Cdd:PTZ00121  1444 KKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEA--KKKAEEAKKKADEAKKAAEAKKKADEAKKAE-- 1519
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  802 eerspswisasvteplEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREARGDTVVSEAEltpeAVTAAETAGPLG 881
Cdd:PTZ00121  1520 ----------------EAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAE----EAKKAEEDKNMA 1579
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  882 AEEGTEASAAEETTEMVSAVSQLTDSPDTTEEATPVQEVEGGVPDI--EEQERRTQEVLQAVAEKVKEESQLPGTGGPED 959
Cdd:PTZ00121  1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELkkAEEEKKKVEQLKKKEAEEKKKAEELKKAEEEN 1659
                          490       500       510       520       530       540
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1634229889  960 VLQPVQRAEAERPEEQAEASGLKKETDVVLKVDAQEAKTEPFTQGKVVGQTTPESFEKAPQVTESIE 1026
Cdd:PTZ00121  1660 KIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
850-980 1.19e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 43.43  E-value: 1.19e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1634229889  850 PENREA----RGDTVVSE--AELTPEAVTAAETAG------------PLGAEEGTEASAAE--ETTEMVSAVSQLTDSPD 909
Cdd:PRK13108   276 PKGREApgalRGSEYVVDeaLEREPAELAAAAVASaasavgpvgpgePNQPDDVAEAVKAEvaEVTDEVAAESVVQVADR 355
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1634229889  910 TTEEATPVQEVEGgvPDIEEQERRTQEVLQAVAEKVKEESQLPGTGGPEDvlQPVQRAEAERPEEQAEASG 980
Cdd:PRK13108   356 DGESTPAVEETSE--ADIEREQPGDLAGQAPAAHQVDAEAASAAPEEPAA--LASEAHDETEPEVPEKAAP 422
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH