NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1484505964|ref|NP_001353291|]
View 

androgen-induced gene 1 protein isoform w [Homo sapiens]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Far-17a_AIG1 super family cl04723
FAR-17a/AIG1-like protein; This family includes the hamster androgen-induced FAR-17a protein, ...
36-71 9.77e-08

FAR-17a/AIG1-like protein; This family includes the hamster androgen-induced FAR-17a protein, and its human homolog, the AIG1 protein. The function of these proteins is unknown. This family also includes homologous regions from a number of other metazoan proteins.


The actual alignment was detected with superfamily member pfam04750:

Pssm-ID: 428104  Cd Length: 206  Bit Score: 46.16  E-value: 9.77e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1484505964  36 AILLSYCSILCNYKAIEMPSHQ-------TYGGSWKFLTFIDL 71
Cdd:pfam04750   1 FRLLFHLSVLCWYAALFYYFHQyprlpnrHYGGKFKYLTFINL 43
 
Name Accession Description Interval E-value
Far-17a_AIG1 pfam04750
FAR-17a/AIG1-like protein; This family includes the hamster androgen-induced FAR-17a protein, ...
36-71 9.77e-08

FAR-17a/AIG1-like protein; This family includes the hamster androgen-induced FAR-17a protein, and its human homolog, the AIG1 protein. The function of these proteins is unknown. This family also includes homologous regions from a number of other metazoan proteins.


Pssm-ID: 428104  Cd Length: 206  Bit Score: 46.16  E-value: 9.77e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1484505964  36 AILLSYCSILCNYKAIEMPSHQ-------TYGGSWKFLTFIDL 71
Cdd:pfam04750   1 FRLLFHLSVLCWYAALFYYFHQyprlpnrHYGGKFKYLTFINL 43
 
Name Accession Description Interval E-value
Far-17a_AIG1 pfam04750
FAR-17a/AIG1-like protein; This family includes the hamster androgen-induced FAR-17a protein, ...
36-71 9.77e-08

FAR-17a/AIG1-like protein; This family includes the hamster androgen-induced FAR-17a protein, and its human homolog, the AIG1 protein. The function of these proteins is unknown. This family also includes homologous regions from a number of other metazoan proteins.


Pssm-ID: 428104  Cd Length: 206  Bit Score: 46.16  E-value: 9.77e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1484505964  36 AILLSYCSILCNYKAIEMPSHQ-------TYGGSWKFLTFIDL 71
Cdd:pfam04750   1 FRLLFHLSVLCWYAALFYYFHQyprlpnrHYGGKFKYLTFINL 43
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH