|
Name |
Accession |
Description |
Interval |
E-value |
| UBA_NACA_NACP1 |
cd14415 |
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and ... |
2032-2077 |
1.13e-26 |
|
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and putative NACA-like protein (NACP1); NACA, also called NAC-alpha or alpha-NAC, together with BTF3, also called Beta-NAC, form the nascent polypeptide-associated complex (NAC) which is a cytosolic protein chaperone that contacts the nascent polypeptide chains as they emerge from the ribosome. Besides, NACA has a high affinity for nucleic acids and exists as part of several protein complexes playing a role in proliferation, apoptosis, or degradation. It is a cytokine-modulated specific transcript in the human TF-1 erythroleukemic cell line. It also acts as a transcriptional co-activator in osteoblasts by binding to phosphorylated c-Jun, a member of the activator-protein-1 (AP-1) family. Moreover, NACA binds to and regulates the adaptor protein Fas-associated death domain (FADD). In addition, NACA functions as a novel factor participating in the positive regulation of human erythroid-cell differentiation. Both NACA and BTF3 harbor an NAC domain that mediates the dimerization of the two subunits. By contrast, NACA has an extra ubiquitin-associated (UBA) domain in the C-terminus. In addition to NACA, the family includes NACP1, also called Alpha-NAC pseudogene 1 or NAC-alpha pseudogene 1. The biological function of NACP1 remains unclear.
Pssm-ID: 270598 Cd Length: 46 Bit Score: 103.88 E-value: 1.13e-26
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 1476587933 2032 EEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:cd14415 1 EEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 46
|
|
| NAC_NACA |
cd22054 |
nascent polypeptide-associated complex (NAC), alpha subunit; The nascent ... |
1947-1994 |
3.20e-25 |
|
nascent polypeptide-associated complex (NAC), alpha subunit; The nascent polypeptide-associated complex (NAC) is a complex, conserved from archaea to human, that plays an important role in co translational targeting of nascent polypeptides to the endoplasmic reticulum (ER). In eukaryotes, under physiological conditions, the complex is a stable heterodimer of the NAC alpha subunit and the NAC beta subunit, also known as basal transcription factor 3b (BTF3b). An imbalance of the relative concentrations has been observed in diseases, like Alzheimer's, AIDS, and ulcerative colitis. NAC alpha consists of a NAC domain, also present in BTF3, and a unique C-terminal ubiquitin-associated (UBA) domain.
Pssm-ID: 409233 Cd Length: 48 Bit Score: 99.94 E-value: 3.20e-25
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1476587933 1947 GLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDL 1994
Cdd:cd22054 1 GLKPVPGVTRVTIKKSKNILFVINKPDVYKSPGSDTYIVFGEAKIEDL 48
|
|
| NAC |
pfam01849 |
NAC domain; |
1938-1991 |
1.90e-22 |
|
NAC domain;
Pssm-ID: 426474 Cd Length: 54 Bit Score: 92.15 E-value: 1.90e-22
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1476587933 1938 KARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKI 1991
Cdd:pfam01849 1 KLQKALKKLGLKPIPGVEEVNIFKSDGKVLVFNNPKVQKSPGSNTYVVFGEAEE 54
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1273-1839 |
1.58e-13 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 76.90 E-value: 1.58e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1273 SLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG------- 1345
Cdd:PHA03247 2467 SLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTWIRGleelasd 2546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1346 -----TPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPv 1420
Cdd:PHA03247 2547 dagdpPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPD- 2625
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1421 tregaatpskgdltPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPM 1500
Cdd:PHA03247 2626 --------------PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPT 2691
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1501 GAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAmtVPSPKKTPAIPTPKEAPATPSSKEAS 1580
Cdd:PHA03247 2692 VGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPA--VPAGPATPGGPARPARPPTTAGPPAP 2769
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1581 SPPAVTPSTykgapsPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCK 1660
Cdd:PHA03247 2770 APPAAPAAG------PPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP 2843
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1661 MGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATS----PPICPDPSAKNGSKGPLSTVAPA 1736
Cdd:PHA03247 2844 GPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTEsfalPPDQPERPPQPQAPPPPQPQPQP 2923
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1737 PLLPVQKDSSKTAKGKDASHSPKGPLAP---PESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPK 1813
Cdd:PHA03247 2924 PPPPQPQPPPPPPPRPQPPLAPTTDPAGagePSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSR 3003
|
570 580 590
....*....|....*....|....*....|..
gi 1476587933 1814 QQFLPSSPGLVLESPSKP------LAPADEDE 1839
Cdd:PHA03247 3004 VSSWASSLALHEETDPPPvslkqtLWPPDDTE 3035
|
|
| EGD2 |
COG1308 |
Transcription factor homologous to NACalpha-BTF3 [Transcription]; |
1937-2077 |
7.94e-12 |
|
Transcription factor homologous to NACalpha-BTF3 [Transcription];
Pssm-ID: 440919 [Multi-domain] Cd Length: 116 Bit Score: 64.10 E-value: 7.94e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1937 KKARKAMSKLGLRQVT-GVTRVTIR-KSKNIlfVITKPDVY--KSPASDTYIVFGEAKIEDLSQQAQlaaaekfkvqgea 2012
Cdd:COG1308 8 RKMKQMMKQMGIKVEEiDAEEVIIRtKDKEI--VFENPQVTvmKAQGQETYQIVGEPEEVEKGAEEA------------- 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1476587933 2013 vsniqentqtptvqeeseeeevdetGVEVK--DIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:COG1308 73 -------------------------EVEIPeeDVELVAEQTGVSEEEAREALEEANGDLAEAILKLE 114
|
|
| nac |
PRK06369 |
nascent polypeptide-associated complex protein; Reviewed |
1937-2077 |
4.93e-11 |
|
nascent polypeptide-associated complex protein; Reviewed
Pssm-ID: 235786 [Multi-domain] Cd Length: 115 Bit Score: 61.80 E-value: 4.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1937 KKARKAMSKLGLrQVT--GVTRVTIR-KSKNIlfVITKPDV--YKSPASDTYIVFGEAKIEDLSQQAQLAAAEKfkvqge 2011
Cdd:PRK06369 8 RKMKQMMKQMGI-DVEelDVEEVIIRlKDKEI--VFENPQVtvMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEE------ 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1476587933 2012 avsniqentqtptvqeeseeeevdetgvevkDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:PRK06369 79 -------------------------------DIELVAEQTGVSEEEARKALEEANGDLAEAILKLS 113
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
720-1121 |
1.74e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 60.34 E-value: 1.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 720 PLATLVLAPEIPKSVPSPSLPPAGTPPGTkkvdGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGV 799
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVPPPRPAPRPSEPAV----TSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPP 2629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 800 SVSPQTKRPPTKKGSAGPDtpignlssPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVT 879
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPP--------PERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADP 2701
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 880 LPPKETPTPsvvnlPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPS-----PKGAPTPPAATPPSPKGGP 954
Cdd:PHA03247 2702 PPPPPTPEP-----APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgparpARPPTTAGPPAPAPPAAPA 2776
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 955 ATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAST 1034
Cdd:PHA03247 2777 AGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1035 PPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPK 1114
Cdd:PHA03247 2857 APGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPP 2936
|
....*..
gi 1476587933 1115 GGLATPP 1121
Cdd:PHA03247 2937 PRPQPPL 2943
|
|
| HYPK_UBA |
pfam19026 |
HYPK UBA domain; This entry represents the UBA domain found at the C-terminus of the HYPK ... |
2037-2077 |
7.03e-08 |
|
HYPK UBA domain; This entry represents the UBA domain found at the C-terminus of the HYPK protein and its homologs. This domain in HYPK mediates a protein interaction with the Naa15 C-terminus.
Pssm-ID: 436907 Cd Length: 41 Bit Score: 50.25 E-value: 7.03e-08
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1476587933 2037 TGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:pfam19026 1 VKVKKEDVELIMTELEVSKAKAERALREHGGDVVAALRALL 41
|
|
| TIGR00264 |
TIGR00264 |
alpha-NAC-related protein; This hypothetical protein is found so far only in the Archaea. Its ... |
1934-2076 |
3.53e-06 |
|
alpha-NAC-related protein; This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator. [Unknown function, General]
Pssm-ID: 272988 [Multi-domain] Cd Length: 116 Bit Score: 48.02 E-value: 3.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1934 RSEKKARKAMSKLGLR-QVTGVTRVTIR-KSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLsqqaqlaaaekfkvqgE 2011
Cdd:TIGR00264 9 KMLKQMQKMMKQMGMEmEDLDVEEVIIVfDDEEWIFENPKVQVMDILGVKTYQITGKPKKEKV----------------E 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1476587933 2012 AVSNIQENtqtptvqeeseeeevdetgvevkDIELVMSQANVSRAKAVRALKNNSNDIVNAIMEL 2076
Cdd:TIGR00264 73 EEEEITED-----------------------DIELVMKQCNVSKEEARRALEECGGDLAEAIMKL 114
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
8-184 |
2.43e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 8 TVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQqcPLSAANQASPFPSPSTIASTPLEVPFPqssS 87
Cdd:PRK12323 385 PAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPE--ALAAARQASARGPGGAPAPAPAPAAAP---A 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 88 GTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVA-- 165
Cdd:PRK12323 460 AAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAfe 539
|
170 180
....*....|....*....|
gi 1476587933 166 -VAESGSVITLSAPIAPSEP 184
Cdd:PRK12323 540 tLAPAPAAAPAPRAAAATEP 559
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2-395 |
3.32e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 3.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 2 PGEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPlsAANQASPFPSPSTIASTPLEVP 81
Cdd:PHA03247 2601 PVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDP--APGRVSRPRRARRLGRAAQASS 2678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 82 FPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSP 161
Cdd:PHA03247 2679 PPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPA 2758
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 162 PSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKG----TPSPPCIVSTVPYHCVTPMASIQSGVASlPQTTPTT 237
Cdd:PHA03247 2759 RPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLpspwDPADPPAAVLAPAAALPPAASPAGPLPP-PTSAQPT 2837
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 238 TLAIASPQVKDTTISSVLISPQnpGSLSLKGPVSPPAALSLSTQSLPVVTSSQKTAGPNT-----PPDFPISLGSHLAPl 312
Cdd:PHA03247 2838 APPPPPGPPPPSLPLGGSVAPG--GDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTesfalPPDQPERPPQPQAP- 2914
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 313 hQSSFGSVQLLGQTGPSALSDPTVKTISVDHSSTGASYPSQRSVIPPLPSRNEVVPATVAA----FPVVAPSVDKGPSTI 388
Cdd:PHA03247 2915 -PPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVprfrVPQPAPSREAPASST 2993
|
....*..
gi 1476587933 389 SSITCSP 395
Cdd:PHA03247 2994 PPLTGHS 3000
|
|
| fibronec_FbpA |
NF033913 |
LPXTG-anchored fibronectin-binding protein FbpA; FbpA, a fibronectin-binding protein described ... |
1486-1655 |
4.82e-03 |
|
LPXTG-anchored fibronectin-binding protein FbpA; FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
Pssm-ID: 468243 [Multi-domain] Cd Length: 386 Bit Score: 41.59 E-value: 4.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1486 TSSSPKKAPATPAPmgAPTLPAVipsspKEVPATPSSRRDPIAPtATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIP 1565
Cdd:NF033913 160 TTDSPEETPSSETP--APSIPAL-----PEAPAQSAESEEPSVA-ASSEETPSPETPAAPETPEEPAAPAPSPESEPSVA 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1566 TPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLipPAVTSPSpkeaptppavtppspekgPATPAPKGTPTSPPVTPS 1645
Cdd:NF033913 232 ASSEETPSPSTPAAPETPAESEAPAQPAESEESSV--AATTSPS------------------PSTPAESETQTPPAVTKD 291
|
170
....*....|
gi 1476587933 1646 SlkDSPTSPA 1655
Cdd:NF033913 292 S--DKPSSAA 299
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
1458-1829 |
5.67e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 42.06 E-value: 5.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1458 TPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKK 1537
Cdd:pfam03154 176 AQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMTQP 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1538 TPATLAPKEALIPPAMTVP----------SPKKTPAIPTPKEAPATPSSKEASSPPAvtPSTYKGAPSPKELLIPPAVTS 1607
Cdd:pfam03154 256 PPPSQVSPQPLPQPSLHGQmppmphslqtGPSHMQHPVPPQPFPLTPQSSQSQVPPG--PSPAAPGQSQQRIHTPPSQSQ 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1608 PSPKEAPTPPAVTPPSPEKgPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVA 1687
Cdd:pfam03154 334 LQSQQPPREQPLPPAPLSM-PHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHP 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1688 PA----PESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLA 1763
Cdd:pfam03154 413 PPlqlmPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGI 492
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1476587933 1764 PPESKASTPLTaaafekvLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPS 1829
Cdd:pfam03154 493 QPPSSASVSSS-------GPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPTVVNTPS 551
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| UBA_NACA_NACP1 |
cd14415 |
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and ... |
2032-2077 |
1.13e-26 |
|
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and putative NACA-like protein (NACP1); NACA, also called NAC-alpha or alpha-NAC, together with BTF3, also called Beta-NAC, form the nascent polypeptide-associated complex (NAC) which is a cytosolic protein chaperone that contacts the nascent polypeptide chains as they emerge from the ribosome. Besides, NACA has a high affinity for nucleic acids and exists as part of several protein complexes playing a role in proliferation, apoptosis, or degradation. It is a cytokine-modulated specific transcript in the human TF-1 erythroleukemic cell line. It also acts as a transcriptional co-activator in osteoblasts by binding to phosphorylated c-Jun, a member of the activator-protein-1 (AP-1) family. Moreover, NACA binds to and regulates the adaptor protein Fas-associated death domain (FADD). In addition, NACA functions as a novel factor participating in the positive regulation of human erythroid-cell differentiation. Both NACA and BTF3 harbor an NAC domain that mediates the dimerization of the two subunits. By contrast, NACA has an extra ubiquitin-associated (UBA) domain in the C-terminus. In addition to NACA, the family includes NACP1, also called Alpha-NAC pseudogene 1 or NAC-alpha pseudogene 1. The biological function of NACP1 remains unclear.
Pssm-ID: 270598 Cd Length: 46 Bit Score: 103.88 E-value: 1.13e-26
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 1476587933 2032 EEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:cd14415 1 EEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 46
|
|
| NAC_NACA |
cd22054 |
nascent polypeptide-associated complex (NAC), alpha subunit; The nascent ... |
1947-1994 |
3.20e-25 |
|
nascent polypeptide-associated complex (NAC), alpha subunit; The nascent polypeptide-associated complex (NAC) is a complex, conserved from archaea to human, that plays an important role in co translational targeting of nascent polypeptides to the endoplasmic reticulum (ER). In eukaryotes, under physiological conditions, the complex is a stable heterodimer of the NAC alpha subunit and the NAC beta subunit, also known as basal transcription factor 3b (BTF3b). An imbalance of the relative concentrations has been observed in diseases, like Alzheimer's, AIDS, and ulcerative colitis. NAC alpha consists of a NAC domain, also present in BTF3, and a unique C-terminal ubiquitin-associated (UBA) domain.
Pssm-ID: 409233 Cd Length: 48 Bit Score: 99.94 E-value: 3.20e-25
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1476587933 1947 GLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDL 1994
Cdd:cd22054 1 GLKPVPGVTRVTIKKSKNILFVINKPDVYKSPGSDTYIVFGEAKIEDL 48
|
|
| NAC |
pfam01849 |
NAC domain; |
1938-1991 |
1.90e-22 |
|
NAC domain;
Pssm-ID: 426474 Cd Length: 54 Bit Score: 92.15 E-value: 1.90e-22
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1476587933 1938 KARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKI 1991
Cdd:pfam01849 1 KLQKALKKLGLKPIPGVEEVNIFKSDGKVLVFNNPKVQKSPGSNTYVVFGEAEE 54
|
|
| UBA_NAC_euk |
cd14358 |
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and its ... |
2042-2077 |
7.39e-20 |
|
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and its homologs mainly found in eukaryotes; The subfamily contains nascent polypeptide-associated complex subunit alpha (NACA), putative NACA-like protein (NACP1), nascent polypeptide-associated complex subunit alpha domain-containing protein 1 (NACAD), and similar proteins. NACA, also called NAC-alpha or Alpha-NAC, together with BTF3, also called Beta-NAC, form the nascent polypeptide-associated complex (NAC) which is a cytosolic protein chaperone that contacts the nascent polypeptide chains as they emerge from the ribosome. Besides, NACA has a high affinity for nucleic acids and exists as part of several protein complexes playing a role in proliferation, apoptosis, or degradation. It is a cytokine-modulated specific transcript in the human TF-1 erythroleukemic cell line. It also acts as a transcriptional co-activator in osteoblasts by binding to phosphorylated c-Jun, a member of the activator-protein-1 (AP-1) family. Moreover, NACA binds to and regulates the adaptor protein Fas-associated death domain (FADD). In addition, NACA functions as a novel factor participating in the positive regulation of human erythroid-cell differentiation. The biological function of NACP1 (also called Alpha-NAC pseudogene 1 or NAC-alpha pseudogene 1) and NACAD remain unclear. All family members contain an NAC domain and a C-terminal ubiquitin-associated (UBA) domain.
Pssm-ID: 270541 [Multi-domain] Cd Length: 37 Bit Score: 84.21 E-value: 7.39e-20
10 20 30
....*....|....*....|....*....|....*.
gi 1476587933 2042 KDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:cd14358 2 KDIELVMQQANVSRAKAVKALKENDNDIVNAIMELT 37
|
|
| UBA_NACAD |
cd14416 |
UBA-like domain found in nascent polypeptide-associated complex subunit alpha ... |
2037-2078 |
4.87e-19 |
|
UBA-like domain found in nascent polypeptide-associated complex subunit alpha domain-containing protein 1 (NACAD); The subfamily includes a group of uncharacterized proteins mainly found in vertebrates. Their biological function remains unknown, but they show high sequence similarity to the nascent polypeptide-associated complex (NAC) subunit alpha (NACA) that exists as part of several protein complexes playing a role in proliferation, apoptosis, or degradation. Like NACA, NACAD contains an NAC domain and a C-terminal ubiquitin-associated (UBA) domain.
Pssm-ID: 270599 Cd Length: 44 Bit Score: 82.05 E-value: 4.87e-19
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1476587933 2037 TGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 2078
Cdd:cd14416 3 TGLEVRDIELVMAQANVSRAKAVRALRHNNNDIVNAIMELTM 44
|
|
| UBA_NAC_like |
cd14278 |
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and ... |
2042-2077 |
7.31e-15 |
|
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and similar proteins; The family contains nascent polypeptide-associated complex subunit alpha (NACA), putative NACA-like protein (NACP1), nascent polypeptide-associated complex subunit alpha domain-containing protein 1 (NACAD), and similar proteins found in archaea and bacteria. NACA, also called NAC-alpha or Alpha-NAC, together with BTF3, also called Beta-NAC, form the nascent polypeptide-associated complex (NAC) which is a cytosolic protein chaperone that contacts the nascent polypeptide chains as they emerge from the ribosome. Besides, NACA has a high affinity for nucleic acids and exists as part of several protein complexes playing a role in proliferation, apoptosis, or degradation. It is a cytokine-modulated specific transcript in the human TF-1 erythroleukemic cell line. It also acts as a transcriptional co-activator in osteoblasts by binding to phosphorylated c-Jun, a member of the activator-protein-1 (AP-1) family. Moreover, NACA binds to and regulates the adaptor protein Fas-associated death domain (FADD). In addition, NACA functions as a novel factor participating in the positive regulation of human erythroid-cell differentiation. The biological function of NACP1 (also called Alpha-NAC pseudogene 1 or NAC-alpha pseudogene 1) and NACAD remain unclear. The family also includes huntingtin-interacting protein K (HYPK), also called Huntingtin yeast partner K or Huntingtin yeast two-hybrid protein K. It is an intrinsically unstructured Huntingtin (HTT)-interacting protein with chaperone-like activity. It may be involved in regulating cell growth, cell cycle, unfolded protein response and cell death. All members in this family contain an ubiquitin-associated (UBA) domain.
Pssm-ID: 270464 [Multi-domain] Cd Length: 37 Bit Score: 69.82 E-value: 7.31e-15
10 20 30
....*....|....*....|....*....|....*.
gi 1476587933 2042 KDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:cd14278 2 EDIELVMSQTGVSREEAIKALRENKGDVVDAILELT 37
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1273-1839 |
1.58e-13 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 76.90 E-value: 1.58e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1273 SLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG------- 1345
Cdd:PHA03247 2467 SLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTWIRGleelasd 2546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1346 -----TPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPv 1420
Cdd:PHA03247 2547 dagdpPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPD- 2625
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1421 tregaatpskgdltPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPM 1500
Cdd:PHA03247 2626 --------------PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPT 2691
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1501 GAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAmtVPSPKKTPAIPTPKEAPATPSSKEAS 1580
Cdd:PHA03247 2692 VGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPA--VPAGPATPGGPARPARPPTTAGPPAP 2769
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1581 SPPAVTPSTykgapsPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCK 1660
Cdd:PHA03247 2770 APPAAPAAG------PPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP 2843
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1661 MGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATS----PPICPDPSAKNGSKGPLSTVAPA 1736
Cdd:PHA03247 2844 GPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTEsfalPPDQPERPPQPQAPPPPQPQPQP 2923
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1737 PLLPVQKDSSKTAKGKDASHSPKGPLAP---PESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPK 1813
Cdd:PHA03247 2924 PPPPQPQPPPPPPPRPQPPLAPTTDPAGagePSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSR 3003
|
570 580 590
....*....|....*....|....*....|..
gi 1476587933 1814 QQFLPSSPGLVLESPSKP------LAPADEDE 1839
Cdd:PHA03247 3004 VSSWASSLALHEETDPPPvslkqtLWPPDDTE 3035
|
|
| EGD2 |
COG1308 |
Transcription factor homologous to NACalpha-BTF3 [Transcription]; |
1937-2077 |
7.94e-12 |
|
Transcription factor homologous to NACalpha-BTF3 [Transcription];
Pssm-ID: 440919 [Multi-domain] Cd Length: 116 Bit Score: 64.10 E-value: 7.94e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1937 KKARKAMSKLGLRQVT-GVTRVTIR-KSKNIlfVITKPDVY--KSPASDTYIVFGEAKIEDLSQQAQlaaaekfkvqgea 2012
Cdd:COG1308 8 RKMKQMMKQMGIKVEEiDAEEVIIRtKDKEI--VFENPQVTvmKAQGQETYQIVGEPEEVEKGAEEA------------- 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1476587933 2013 vsniqentqtptvqeeseeeevdetGVEVK--DIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:COG1308 73 -------------------------EVEIPeeDVELVAEQTGVSEEEAREALEEANGDLAEAILKLE 114
|
|
| nac |
PRK06369 |
nascent polypeptide-associated complex protein; Reviewed |
1937-2077 |
4.93e-11 |
|
nascent polypeptide-associated complex protein; Reviewed
Pssm-ID: 235786 [Multi-domain] Cd Length: 115 Bit Score: 61.80 E-value: 4.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1937 KKARKAMSKLGLrQVT--GVTRVTIR-KSKNIlfVITKPDV--YKSPASDTYIVFGEAKIEDLSQQAQLAAAEKfkvqge 2011
Cdd:PRK06369 8 RKMKQMMKQMGI-DVEelDVEEVIIRlKDKEI--VFENPQVtvMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEE------ 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1476587933 2012 avsniqentqtptvqeeseeeevdetgvevkDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:PRK06369 79 -------------------------------DIELVAEQTGVSEEEARKALEEANGDLAEAILKLS 113
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1228-1688 |
2.73e-10 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 66.12 E-value: 2.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1228 PKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGgpATSPPK 1307
Cdd:PHA03247 2604 DRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQ--ASSPPQ 2681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1308 GAPTPPaATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPP 1387
Cdd:PHA03247 2682 RPRRRA-ARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP 2760
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1388 SPKRGPAIPSPKGDPTSPAviplsPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSskgdPTL 1467
Cdd:PHA03247 2761 PTTAGPPAPAPPAAPAAGP-----PRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPL----PPP 2831
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1468 PAVTPpspkeppapkqvATSSSPKKAPATPAPMGAptlpAVIPSSPkeVPATPSSRRDPIAPTAtllSKKTPATLAPKEA 1547
Cdd:PHA03247 2832 TSAQP------------TAPPPPPGPPPPSLPLGG----SVAPGGD--VRRRPPSRSPAAKPAA---PARPPVRRLARPA 2890
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1548 LIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKG 1627
Cdd:PHA03247 2891 VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPG 2970
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1476587933 1628 PATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAP 1688
Cdd:PHA03247 2971 RVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQTLWPP 3031
|
|
| NAC |
cd21114 |
NAC domain; This family contains the NAC domain, named after the nascent ... |
1951-1993 |
3.79e-10 |
|
NAC domain; This family contains the NAC domain, named after the nascent polypeptide-associated complex (NAC) whose subunits contain NAC domains. In eukaryotes, the NAC complex, which plays an important role in co-translational targeting of nascent polypeptides to endoplasmic reticulum (ER), consists of 2 subunits: NAC alpha and a shortened splice variant of the basal transcription factor 3 (BTF3; also called BTF3b or NAC beta). The full length BTF3a protein excites transcription.
Pssm-ID: 409232 Cd Length: 43 Bit Score: 56.93 E-value: 3.79e-10
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 1476587933 1951 VTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIED 1993
Cdd:cd21114 1 IPGIEEVTMVMEDGSVIVFTMPKVQASLASNVFVVTGEATREQ 43
|
|
| UBA_AeNAC |
cd14359 |
UBA-like domain found in archaeal nascent polypeptide-associated complex homolog from ... |
2043-2077 |
1.34e-09 |
|
UBA-like domain found in archaeal nascent polypeptide-associated complex homolog from Methanothermobacter marburgensis (AeNAC) and similar proteins; AeNAC is a functional archaeal homolog of eukaryotic nascent polypeptide-associated complex (NAC). Both AeNAC and eukaryotic NAC function as the cytosolic chaperone that can bind to ribosomal RNA, interact with the nascent polypeptide chains as they emerge from the ribosome, and assist in post-translational processes. They all contain a NAC domain and an ubiquitin-associated (UBA) domain in the C-terminus. However, unlike eukaryotic NAC, AeNAC forms a ribosome associated homodimer, but not heterodimer. The NAC domain of AeNAC is responsible for the homodimer formation.
Pssm-ID: 270542 [Multi-domain] Cd Length: 40 Bit Score: 55.31 E-value: 1.34e-09
10 20 30
....*....|....*....|....*....|....*
gi 1476587933 2043 DIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:cd14359 6 DIELVMEQTGVSREEARKALEESGGDLAEAILKLT 40
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
720-1121 |
1.74e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 60.34 E-value: 1.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 720 PLATLVLAPEIPKSVPSPSLPPAGTPPGTkkvdGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGV 799
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVPPPRPAPRPSEPAV----TSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPP 2629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 800 SVSPQTKRPPTKKGSAGPDtpignlssPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVT 879
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPP--------PERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADP 2701
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 880 LPPKETPTPsvvnlPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPS-----PKGAPTPPAATPPSPKGGP 954
Cdd:PHA03247 2702 PPPPPTPEP-----APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgparpARPPTTAGPPAPAPPAAPA 2776
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 955 ATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAST 1034
Cdd:PHA03247 2777 AGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1035 PPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPK 1114
Cdd:PHA03247 2857 APGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPP 2936
|
....*..
gi 1476587933 1115 GGLATPP 1121
Cdd:PHA03247 2937 PRPQPPL 2943
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1448-1811 |
2.07e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.80 E-value: 2.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1448 ATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAviPSSPKEVPATPSsrrdpi 1527
Cdd:PHA03307 51 AAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPG--PSSPDPPPPTPP------ 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1528 aptatllskktPATLAPkealiPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTS 1607
Cdd:PHA03307 123 -----------PASPPP-----SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAP 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1608 PSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPvTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVA 1687
Cdd:PHA03307 187 SSPPAEPPPSTPPAAASPRPPRRSSPISASASSP-APAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1688 PAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPeS 1767
Cdd:PHA03307 266 PTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSP-G 344
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1476587933 1768 KASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLP 1811
Cdd:PHA03307 345 PSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRR 388
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1396-1599 |
3.12e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.73 E-value: 3.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1396 PSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDltPPAVTPVSLKKAPATSAPKGGPATPSSKGDPtLPAVTPPSP 1475
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAA--PPAAPAAAPAAAAAARAVAAAPARRSPAPEA-LAAARQASA 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1476 KEPPAPKQVATSSSPKKAPATPAPMGAP---TLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPA 1552
Cdd:PRK12323 442 RGPGGAPAPAPAPAAAPAAAARPAAAGPrpvAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGW 521
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1476587933 1553 MTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKEL 1599
Cdd:PRK12323 522 VAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRA 568
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1373-1587 |
6.11e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.96 E-value: 6.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1373 AATPSHKGGPAmTPPSPKRGP-AIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDL-TPPAVTPVSLKKAPATS 1450
Cdd:PRK12323 362 AFRPGQSGGGA-GPATAAAAPvAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAApARRSPAPEALAAARQAS 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1451 APKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPT 1530
Cdd:PRK12323 441 ARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAG 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1531 ATLLSKKTPATL---APKEALIPPAMTVPSPkkTPAIPTPKEAPATPSSKEASSPPAVTP 1587
Cdd:PRK12323 521 WVAESIPDPATAdpdDAFETLAPAPAAAPAP--RAAAATEPVVAPRPPRASASGLPDMFD 578
|
|
| HYPK_UBA |
pfam19026 |
HYPK UBA domain; This entry represents the UBA domain found at the C-terminus of the HYPK ... |
2037-2077 |
7.03e-08 |
|
HYPK UBA domain; This entry represents the UBA domain found at the C-terminus of the HYPK protein and its homologs. This domain in HYPK mediates a protein interaction with the Naa15 C-terminus.
Pssm-ID: 436907 Cd Length: 41 Bit Score: 50.25 E-value: 7.03e-08
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1476587933 2037 TGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:pfam19026 1 VKVKKEDVELIMTELEVSKAKAERALREHGGDVVAALRALL 41
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
628-955 |
2.45e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.49 E-value: 2.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 628 GPDSAGPLLKSSLITPTVAAFPLESADPAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASEN 707
Cdd:PHA03247 2602 VDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQ 2681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 708 CPVAPSPQNTCAPLATLVLAP---EIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSK 784
Cdd:PHA03247 2682 RPRRRAARPTVGSLTSLADPPpppPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPP 2761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 785 GTLTYLADSPsPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDS----PATTHSPTPPS 860
Cdd:PHA03247 2762 TTAGPPAPAP-PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAgplpPPTSAQPTAPP 2840
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 861 PKGAPTPSAVT---------PLSPKGVTLPPKETPT----------------PSVVNLPFPKEGPATPAPKQAPALSMTS 915
Cdd:PHA03247 2841 PPPGPPPPSLPlggsvapggDVRRRPPSRSPAAKPAaparppvrrlarpavsRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1476587933 916 SS-PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPA 955
Cdd:PHA03247 2921 PQpPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ 2961
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1484-1669 |
2.85e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.65 E-value: 2.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1484 VATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPA 1563
Cdd:PRK12323 386 APAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPA 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1564 IPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLiPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVT 1643
Cdd:PRK12323 466 AAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEEL-PPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPA 544
|
170 180
....*....|....*....|....*.
gi 1476587933 1644 PSSlKDSPTSPASVTCKMGATVPQAS 1669
Cdd:PRK12323 545 PAA-APAPRAAAATEPVVAPRPPRAS 569
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
849-1308 |
3.70e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.71 E-value: 3.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 849 SPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETP-TPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKA------ 921
Cdd:PHA03247 2561 PAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPrAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAanepdp 2640
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 922 ---RATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKG 998
Cdd:PHA03247 2641 hppPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATP 2720
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 999 GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAAtplPKGAPTTPAATLPSPKGGPATPSLkg 1078
Cdd:PHA03247 2721 LPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAP---PAAPAAGPPRRLTRPAVASLSESR-- 2795
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1079 aptppaatppspkggPATPSPKGAPMPPAATPPSPKgglATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPS 1158
Cdd:PHA03247 2796 ---------------ESLPSPWDPADPPAAVLAPAA---ALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVA 2857
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1159 PKGGLATPPPKGAPTTPAATPPSPKG-GLATPSPKGAPTTPAATPPSPkgglatPSPKGAPTTPAATPPSPKGGLATPSP 1237
Cdd:PHA03247 2858 PGGDVRRRPPSRSPAAKPAAPARPPVrRLARPAVSRSTESFALPPDQP------ERPPQPQAPPPPQPQPQPPPPPQPQP 2931
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1476587933 1238 KGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKgAPNPAvvtPPSPKGGPATSPPKG 1308
Cdd:PHA03247 2932 PPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFR-VPQPA---PSREAPASSTPPLTG 2998
|
|
| TIGR00264 |
TIGR00264 |
alpha-NAC-related protein; This hypothetical protein is found so far only in the Archaea. Its ... |
1934-2076 |
3.53e-06 |
|
alpha-NAC-related protein; This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator. [Unknown function, General]
Pssm-ID: 272988 [Multi-domain] Cd Length: 116 Bit Score: 48.02 E-value: 3.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1934 RSEKKARKAMSKLGLR-QVTGVTRVTIR-KSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLsqqaqlaaaekfkvqgE 2011
Cdd:TIGR00264 9 KMLKQMQKMMKQMGMEmEDLDVEEVIIVfDDEEWIFENPKVQVMDILGVKTYQITGKPKKEKV----------------E 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1476587933 2012 AVSNIQENtqtptvqeeseeeevdetgvevkDIELVMSQANVSRAKAVRALKNNSNDIVNAIMEL 2076
Cdd:TIGR00264 73 EEEEITED-----------------------DIELVMKQCNVSKEEARRALEECGGDLAEAIMKL 114
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1627-1860 |
4.31e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.80 E-value: 4.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1627 GPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASkglPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQT 1706
Cdd:PRK12323 370 GGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAA---AAAARAVAAAPARRSPAPEALAAARQASARGPGG 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1707 KKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSP----KGPLAPPESKASTPLTAAAFEKVL 1782
Cdd:PRK12323 447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPweelPPEFASPAPAQPDAAPAGWVAESI 526
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1476587933 1783 PKPESASVSAA-PSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVlESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLV 1860
Cdd:PRK12323 527 PDPATADPDDAfETLAPAPAAAPAPRAAAATEPVVAPRPPRAS-ASGLPDMFDGDWPALAARLPVRGLAQQLARQSELA 604
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1346-1587 |
7.46e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.39 E-value: 7.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1346 TPTLPATTPSSKGGPTTPSSKEGPTPPAATPShkggPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGA 1425
Cdd:PRK07003 387 AAAAVGASAVPAVTAVTGAAGAALAPKAAAAA----AATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1426 ATP--------SKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPkqVATSSSPKKAPATP 1497
Cdd:PRK07003 463 CDErdaqppadSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAA--PPAPEARPPTPAAA 540
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1498 APMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPAtlAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSK 1577
Cdd:PRK07003 541 APAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAA--APKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQ 618
|
250
....*....|
gi 1476587933 1578 EASSPPAVTP 1587
Cdd:PRK07003 619 AAESRGAPPP 628
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1517-1714 |
3.23e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.10 E-value: 3.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1517 PATPSSrrdpiAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSP 1596
Cdd:PRK12323 374 PATAAA-----APVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1597 KELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKK 1676
Cdd:PRK12323 449 APAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPD 528
|
170 180 190
....*....|....*....|....*....|....*...
gi 1476587933 1677 GPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSP 1714
Cdd:PRK12323 529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPP 566
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1510-1649 |
3.34e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.94 E-value: 3.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1510 PSSPKEVPAtPSSRRDPIAPTATllskkTPATLAPKEALIPPAMTVPSPKKTPAIPtpkeAPATPSSKEASSPPAVTPST 1589
Cdd:PRK14951 366 PAAAAEAAA-PAEKKTPARPEAA-----APAAAPVAQAAAAPAPAAAPAAAASAPA----APPAAAPPAPVAAPAAAAPA 435
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1590 YKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKD 1649
Cdd:PRK14951 436 AAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1400-1653 |
1.05e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 47.38 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1400 GDPTSPAVIPLSPKkAPATPVTREGAATPSKGDLTPP-AVTPVSLKKAPATSAPKggpatPSSKGDPTLPAVTPPSPKEP 1478
Cdd:PTZ00449 509 EPPEGPEASGLPPK-APGDKEGEEGEHEDSKESDEPKeGGKPGETKEGEVGKKPG-----PAKEHKPSKIPTLSKKPEFP 582
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1479 PAPKQVATSSSPKK-----APATPAPMGAPTLPAV--IPSSPKEvPATPSSRRDPIAPTATLLSKKtpatlaPKEALIPP 1551
Cdd:PTZ00449 583 KDPKHPKDPEEPKKpkrprSAQRPTRPKSPKLPELldIPKSPKR-PESPKSPKRPPPPQRPSSPER------PEGPKIIK 655
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1552 AMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATP 1631
Cdd:PTZ00449 656 SPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEP 735
|
250 260
....*....|....*....|..
gi 1476587933 1632 ApkGTPTSPPVTPSSLKDSPTS 1653
Cdd:PTZ00449 736 I--GDPDAEQPDDIEFFTPPEE 755
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1429-1652 |
1.12e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.18 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1429 SKGDLTPP-AVTPVSLKKAPATSAPKggPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPA 1507
Cdd:PRK12323 368 SGGGAGPAtAAAAPVAQPAPAAAAPA--AAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPG 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1508 VIPSSPKEVPATPSsrrdPIAPTAtllskktPATLAPKEALIPPAMTVPSPKKTPAiPTPKEAPATPSSKEASSPPAVTP 1587
Cdd:PRK12323 446 GAPAPAPAPAAAPA----AAARPA-------AAGPRPVAAAAAAAPARAAPAAAPA-PADDDPPPWEELPPEFASPAPAQ 513
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1476587933 1588 STYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPT 1652
Cdd:PRK12323 514 PDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFD 578
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
858-1439 |
1.21e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 858 PPSPKGAPTPSAVTPLSPKGVTLPPKETPTPsvvnlpFPKEGPATPAPKQAPA-LSMTSSSPKKARATPAPKGIPASPSP 936
Cdd:PHA03247 2489 PFAAGAAPDPGGGGPPDPDAPPAPSRLAPAI------LPDEPVGEPVHPRMLTwIRGLEELASDDAGDPPPPLPPAAPPA 2562
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 937 KGAPtppaatppspkggpATPSPKWAPTPPAATPPSPKGGPATPsPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTP 1016
Cdd:PHA03247 2563 APDR--------------SVPPPRPAPRPSEPAVTSRARRPDAP-PQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPP 2627
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1017 PSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPS-PKGGPATPSLKGAPTP-PAATPPSPKGGP 1094
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASsPPQRPRRRAARPTVGSlTSLADPPPPPPT 2707
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1095 ATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKgaptt 1174
Cdd:PHA03247 2708 PEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR----- 2782
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1175 paatppspkgglATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSpkgapttpaatpPSPKGG 1254
Cdd:PHA03247 2783 ------------LTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPT------------SAQPTA 2838
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1255 PATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPkgaptppaatpPSPKGSPGTPPPKGAPT 1334
Cdd:PHA03247 2839 PPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPA-----------VSRSTESFALPPDQPER 2907
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1335 PPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKK 1414
Cdd:PHA03247 2908 PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSRE 2987
|
570 580
....*....|....*....|....*
gi 1476587933 1415 APATPvtregaaTPSKGDLTPPAVT 1439
Cdd:PHA03247 2988 APASS-------TPPLTGHSLSRVS 3005
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1350-1674 |
1.24e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.47 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1350 PATTPSSKGGPTTPSSKEGPTPPAATPS--HKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPlspkkaPATPVTREGAAT 1427
Cdd:PHA03307 61 ACDRFEPPTGPPPGPGTEAPANESRSTPtwSLSTLAPASPAREGSPTPPGPSSPDPPPPTPP------PASPPPSPAPDL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1428 PSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPmgAPTLPA 1507
Cdd:PHA03307 135 SEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP--PRRSSP 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1508 VIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAmTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTP 1587
Cdd:PHA03307 213 ISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPL-PRPAPITLPTRIWEASGWNGPSSRPGPASSSSSP 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1588 STYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEkGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQ 1667
Cdd:PHA03307 292 RERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSST-SSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPR 370
|
....*..
gi 1476587933 1668 ASKGLPA 1674
Cdd:PHA03307 371 PSRAPSS 377
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1371-1516 |
3.13e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.86 E-value: 3.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1371 PPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATS 1450
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1476587933 1451 APKGGPATPSSKGDPTLPavtppspkeppapkqVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEV 1516
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIP---------------VRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
1367-1457 |
3.27e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.04 E-value: 3.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1367 EGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKA 1446
Cdd:PRK12270 34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
90
....*....|.
gi 1476587933 1447 PATSAPKGGPA 1457
Cdd:PRK12270 114 EDEVTPLRGAA 124
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1138-1460 |
3.76e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.93 E-value: 3.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1138 GGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLA-TPSPKGAPTTPAATPPSPKGGLATPSPkG 1216
Cdd:PHA03307 109 PGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASpAAVASDAASSRQAALPLSSPEETARAP-S 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1217 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPS 1296
Cdd:PHA03307 188 SPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPT 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1297 PKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376
Cdd:PHA03307 268 RIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSP 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1377 SHKGGPAMTPPS------PKRGPAIPSPKGDPTSPAViPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATS 1450
Cdd:PHA03307 348 SRSPSPSRPPPPadpsspRKRPRPSRAPSSPAASAGR-PTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAF 426
|
330
....*....|
gi 1476587933 1451 APKGGPATPS 1460
Cdd:PHA03307 427 YARYPLLTPS 436
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1543-1667 |
3.84e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.48 E-value: 3.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1543 APKEALIPPAMTVPSPKKTPAiPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPP 1622
Cdd:PRK14951 376 AEKKTPARPEAAAPAAAPVAQ-AAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQ 454
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1476587933 1623 SPEKGPATP---APKGTPTSPPVTPSSLKDSPTSPASVTCKM-GATVPQ 1667
Cdd:PRK14951 455 AAPETVAIPvrvAPEPAVASAAPAPAAAPAAARLTPTEEGDVwHATVQQ 503
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1295-1510 |
4.49e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.25 E-value: 4.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1295 PSPKGGPATSPPKGAPTPPAATppspkgsPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAA 1374
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPA-------PAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAAR 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1375 TPSHKGGPAMTPPSPkRGPAIPSPKGDPTSPAVIPlSPKKAPATPVTREGAATPSKGDLTPP----------AVTPVSLK 1444
Cdd:PRK12323 438 QASARGPGGAPAPAP-APAAAPAAAARPAAAGPRP-VAAAAAAAPARAAPAAAPAPADDDPPpweelppefaSPAPAQPD 515
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1476587933 1445 KAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATsssPKKAPATPAPMGAPTLPAVIP 1510
Cdd:PRK12323 516 AAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAAT---EPVVAPRPPRASASGLPDMFD 578
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1495-1680 |
4.84e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.25 E-value: 4.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1495 ATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPAtP 1574
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPA-P 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1575 SSKEASSP-PAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTP--------PSPEKGPATPAPKGTPTSPPVTPS 1645
Cdd:PRK12323 451 APAPAAAPaAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPweelppefASPAPAQPDAAPAGWVAESIPDPA 530
|
170 180 190
....*....|....*....|....*....|....*
gi 1476587933 1646 SLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTA 1680
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1482-1610 |
5.23e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.24 E-value: 5.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1482 KQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRrDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKT 1561
Cdd:PRK07994 372 PQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAV-PLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRAR 450
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1476587933 1562 PAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSP 1610
Cdd:PRK07994 451 PVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKA 499
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1482-1589 |
5.40e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.09 E-value: 5.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1482 KQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPA-TLAPKEALIPPAMTVPSPKK 1560
Cdd:PRK14951 379 KTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAApAAAPAAVALAPAPPAQAAPE 458
|
90 100
....*....|....*....|....*....
gi 1476587933 1561 TPAIPtPKEAPATPSSKEASSPPAVTPST 1589
Cdd:PRK14951 459 TVAIP-VRVAPEPAVASAAPAPAAAPAAA 486
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1539-1835 |
7.08e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.78 E-value: 7.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1539 PATLAPKEALIPPAmTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPStykGAPSPKelliPPAVTSPSPKEAPTPPA 1618
Cdd:PHA03307 75 PGTEAPANESRSTP-TWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPP---ASPPPS----PAPDLSEMLRPVGSPGP 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1619 VTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITA 1698
Cdd:PHA03307 147 PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGR 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1699 PTRKGPQTKKSSATSPP----------ICPDPSAkngSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESK 1768
Cdd:PHA03307 227 SAADDAGASSSDSSSSEssgcgwgpenECPLPRP---APITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSP 303
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1476587933 1769 ASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPA 1835
Cdd:PHA03307 304 GSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPR 370
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1447-1606 |
7.10e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.47 E-value: 7.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDP 1526
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1527 IAPTATLLSKKTPATLAPKEALIPPAMTVPS-PKKTPAIPTPKEAPATPSSKEASSPPAVTPS-TYKGAPSPKELLIPPA 1604
Cdd:PRK07994 441 SEPAAASRARPVNSALERLASVRPAPSALEKaPAKKEAYRWKATNPVEVKKEPVATPKALKKAlEHEKTPELAAKLAAEA 520
|
..
gi 1476587933 1605 VT 1606
Cdd:PRK07994 521 IE 522
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
1350-1451 |
7.92e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 7.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1350 PATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPtspaviplsPKKAPATPVTREGAATPS 1429
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAA---------AAAAAPAAPPAAAAAAAP 108
|
90 100
....*....|....*....|..
gi 1476587933 1430 KGDLTPPAVTPvsLKKAPATSA 1451
Cdd:PRK12270 109 AAAAVEDEVTP--LRGAAAAVA 128
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1540-1777 |
8.77e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 8.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1540 ATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAV 1619
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1620 TPPSPEKGPATPAPKGTPTSPPVTpsslkdsPTSPASVTCKMGATVPQASKGLPAKKGPTAlkevLVAPAPestpiitAP 1699
Cdd:PRK12323 452 PAPAAAPAAAARPAAAGPRPVAAA-------AAAAPARAAPAAAPAPADDDPPPWEELPPE----FASPAP-------AQ 513
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1700 TRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAP---PESKASTPLTAA 1776
Cdd:PRK12323 514 PDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDgdwPALAARLPVRGL 593
|
.
gi 1476587933 1777 A 1777
Cdd:PRK12323 594 A 594
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1354-1531 |
9.39e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.21 E-value: 9.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1354 PSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDL 1433
Cdd:PRK07764 603 PASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPP 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1434 TPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSP 1513
Cdd:PRK07764 683 PAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPP 762
|
170
....*....|....*...
gi 1476587933 1514 KEVPATPSSRRDPIAPTA 1531
Cdd:PRK07764 763 APAPAAAPAAAPPPSPPS 780
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
720-1099 |
1.14e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 720 PLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGV 799
Cdd:PHA03307 20 FFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPAS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 800 SVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPkgVT 879
Cdd:PHA03307 100 PAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALP--LS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 880 LPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPkKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSP 959
Cdd:PHA03307 178 SPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISAS-ASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECP 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 960 KWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPS-PKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAA 1038
Cdd:PHA03307 257 LPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSsPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESS 336
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1476587933 1039 TPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Cdd:PHA03307 337 RGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGR 397
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1282-1469 |
1.42e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.82 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1282 PHKGAPNPAVvTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPT 1361
Cdd:PRK07764 590 PAPGAAGGEG-PPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDG 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1362 TPSSKEGPTPPAATPShkGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPV 1441
Cdd:PRK07764 669 WPAKAGGAAPAAPPPA--PAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPD 746
|
170 180 190
....*....|....*....|....*....|.
gi 1476587933 1442 S---LKKAPATSAPKGGPATPSSKGDPTLPA 1469
Cdd:PRK07764 747 DppdPAGAPAQPPPPPAPAPAAAPAAAPPPS 777
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
849-934 |
1.89e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.34 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 849 SPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPsvvnlpfPKEGPATPAPKQAPALSMTSSSPKKARATPAPK 928
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPA-------AAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109
|
....*.
gi 1476587933 929 GIPASP 934
Cdd:PRK12270 110 AAAVED 115
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1281-1655 |
1.95e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1281 PPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSP---GTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSK 1357
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPqpaPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1358 GGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTS----PAVIPLSPKKAPATPVTREGAATPSKGD- 1432
Cdd:PRK07764 466 PAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLrerwPEILAAVPKRSRKTWAILLPEATVLGVRg 545
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1433 -------LTPPAVTPVSLKKAP------------------ATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATS 1487
Cdd:PRK07764 546 dtlvlgfSTGGLARRFASPGNAevlvtalaeelggdwqveAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPA 625
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1488 -SSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPT 1566
Cdd:PRK07764 626 aPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAP 705
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1567 PKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSS 1646
Cdd:PRK07764 706 AATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEM 785
|
....*....
gi 1476587933 1647 LKDSPTSPA 1655
Cdd:PRK07764 786 AEDDAPSMD 794
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1276-1531 |
1.98e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1276 GGLATPPHKGAPNPAVVTPPSP--KGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATT 1353
Cdd:PRK07003 370 GGVPARVAGAVPAPGARAAAAVgaSAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPV 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1354 PSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPatpvtregAATPSKGDL 1433
Cdd:PRK07003 450 PAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARA--------PAAASREDA 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1434 TPPAVTPvslkkAPATSAPKGGPATPSSKGDPTLPA--VTPPSPKEPPAPKQVATSSSPKKAPATPA-PMGAPTLPAVIP 1510
Cdd:PRK07003 522 PAAAAPP-----APEARPPTPAAAAPAARAGGAAAAldVLRNAGMRVSSDRGARAAAAAKPAAAPAAaPKPAAPRVAVQV 596
|
250 260
....*....|....*....|.
gi 1476587933 1511 SSPKEVPATPSSRRDPIAPTA 1531
Cdd:PRK07003 597 PTPRARAATGDAPPNGAARAE 617
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1360-1540 |
2.21e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1360 PTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVT 1439
Cdd:PRK12323 399 PAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAA 478
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1440 PVSLKKAPATSAPKGGPATPSSKGDPTLPAvtpPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPAT 1519
Cdd:PRK12323 479 APARAAPAAAPAPADDDPPPWEELPPEFAS---PAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAA 555
|
170 180
....*....|....*....|.
gi 1476587933 1520 PSSRRDPIAPTATLLSKKTPA 1540
Cdd:PRK12323 556 ATEPVVAPRPPRASASGLPDM 576
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1347-1518 |
2.24e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1347 PTLPATTPSSKGGPTTPSSKEGPTPPAATPshkggPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAA 1426
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAA-----VAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1427 TPSKGDLTPPAVTPVSLKKAPATSAPKggPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP 1506
Cdd:PRK07994 436 TKAKKSEPAAASRARPVNSALERLASV--RPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELA 513
|
170
....*....|..
gi 1476587933 1507 AVIPSSPKEVPA 1518
Cdd:PRK07994 514 AKLAAEAIERDP 525
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
8-184 |
2.43e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 8 TVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQqcPLSAANQASPFPSPSTIASTPLEVPFPqssS 87
Cdd:PRK12323 385 PAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPE--ALAAARQASARGPGGAPAPAPAPAAAP---A 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 88 GTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVA-- 165
Cdd:PRK12323 460 AAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAfe 539
|
170 180
....*....|....*....|
gi 1476587933 166 -VAESGSVITLSAPIAPSEP 184
Cdd:PRK12323 540 tLAPAPAAAPAPRAAAATEP 559
|
|
| UBA_HYPK |
cd14361 |
UBA-like domain found in Huntingtin-interacting protein K (HYPK) and similar proteins; HYPK, ... |
2039-2077 |
2.53e-03 |
|
UBA-like domain found in Huntingtin-interacting protein K (HYPK) and similar proteins; HYPK, also called Huntingtin yeast partner K or Huntingtin yeast two-hybrid protein K, is an intrinsically unstructured Huntingtin (HTT)-interacting protein with chaperone-like activity. It is involved in regulating cell growth, cell cycle, unfolded protein response, and cell death. All members in this subfamily contain an N-terminal ubiquitin-associated (UBA) that shows high sequence similarity with that of eukaryotic nascent polypeptide-associated complex proteins (NAC) which is one of the cytosolic chaperones that contact the nascent polypeptide chains as they emerge from the ribosome and assist in post-translational processes.
Pssm-ID: 270544 Cd Length: 41 Bit Score: 37.49 E-value: 2.53e-03
10 20 30
....*....|....*....|....*....|....*....
gi 1476587933 2039 VEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2077
Cdd:cd14361 3 VKKEDVELIVNELEVSKAQAERALREHNGDVVKALRALI 41
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
1382-1453 |
2.71e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 42.62 E-value: 2.71e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1476587933 1382 PAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKgdlTPPAVTPVSLKKAPATSAPK 1453
Cdd:PRK14954 384 PAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSPASAPTPEQ---QPPVARSAPLPPSPQASAPR 452
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
1350-1448 |
2.72e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.87 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1350 PATTPSSKGGPTTPSSKEGPTPpaATPSHKGGPAMTPPSPKRgPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPS 1429
Cdd:PRK14950 364 PAPQPAKPTAAAPSPVRPTPAP--STRPKAAAAANIPPKEPV-RETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDE 440
|
90
....*....|....*....
gi 1476587933 1430 KGDLTPPAVTPVSLKKAPA 1448
Cdd:PRK14950 441 KPKYTPPAPPKEEEKALIA 459
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1380-1737 |
3.15e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 3.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1380 GGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKkAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATP 1459
Cdd:PRK07764 388 AGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA-APAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQP 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1460 SSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTL----PAVIPSSPKEVPAT-----PSSRRDPIAPT 1530
Cdd:PRK07764 467 APAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLrerwPEILAAVPKRSRKTwaillPEATVLGVRGD 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1531 ATLLSKKTP------------------------------ATLAPKEALIPPAMTVPSPKKTPaiPTPKEAPATPSSKEAS 1580
Cdd:PRK07764 547 TLVLGFSTGglarrfaspgnaevlvtalaeelggdwqveAVVGPAPGAAGGEGPPAPASSGP--PEEAARPAAPAAPAAP 624
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1581 SPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPAsvtck 1660
Cdd:PRK07764 625 AAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPA----- 699
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1476587933 1661 mgATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAP 1737
Cdd:PRK07764 700 --QPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAP 774
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2-395 |
3.32e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 3.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 2 PGEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPlsAANQASPFPSPSTIASTPLEVP 81
Cdd:PHA03247 2601 PVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDP--APGRVSRPRRARRLGRAAQASS 2678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 82 FPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSP 161
Cdd:PHA03247 2679 PPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPA 2758
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 162 PSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKG----TPSPPCIVSTVPYHCVTPMASIQSGVASlPQTTPTT 237
Cdd:PHA03247 2759 RPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLpspwDPADPPAAVLAPAAALPPAASPAGPLPP-PTSAQPT 2837
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 238 TLAIASPQVKDTTISSVLISPQnpGSLSLKGPVSPPAALSLSTQSLPVVTSSQKTAGPNT-----PPDFPISLGSHLAPl 312
Cdd:PHA03247 2838 APPPPPGPPPPSLPLGGSVAPG--GDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTesfalPPDQPERPPQPQAP- 2914
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 313 hQSSFGSVQLLGQTGPSALSDPTVKTISVDHSSTGASYPSQRSVIPPLPSRNEVVPATVAA----FPVVAPSVDKGPSTI 388
Cdd:PHA03247 2915 -PPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVprfrVPQPAPSREAPASST 2993
|
....*..
gi 1476587933 389 SSITCSP 395
Cdd:PHA03247 2994 PPLTGHS 3000
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
33-184 |
3.51e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.55 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 33 SVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPIS 112
Cdd:PRK07994 363 APLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1476587933 113 PAALALASPMiaptlkgtPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEP 184
Cdd:PRK07994 443 PAAASRARPV--------NSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEH 506
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1281-1597 |
3.51e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.47 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1281 PPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPgtPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGP 1360
Cdd:PHA03307 75 PGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPP--PTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASP 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1361 TTPSSKEGPTP-PAATPSHKGGPAMTPPSPKRGPAIPSPKgDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVT 1439
Cdd:PHA03307 153 PAAGASPAAVAsDAASSRQAALPLSSPEETARAPSSPPAE-PPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADD 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1440 PVSLKKAPATSAPKGGPATPSSKGdpTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPAT 1519
Cdd:PHA03307 232 AGASSSDSSSSESSGCGWGPENEC--PLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAP 309
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1476587933 1520 PSSRRDP-IAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPK 1597
Cdd:PHA03307 310 SSPRASSsSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRR 388
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1448-1715 |
3.76e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 3.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1448 ATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPI 1527
Cdd:PRK07003 364 GGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAA 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1528 APTATLlSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPkEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTS 1607
Cdd:PRK07003 444 DGDAPV-PAKANARASADSRCDERDAQPPADSGSASAPAS-DAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDA 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1608 PSPKEAPTPPAvTPPspekGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVA 1687
Cdd:PRK07003 522 PAAAAPPAPEA-RPP----TPAAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQV 596
|
250 260 270
....*....|....*....|....*....|..
gi 1476587933 1688 PAP----ESTPIITAPTRKGPQTKKSSATSPP 1715
Cdd:PRK07003 597 PTPraraATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| fibronec_FbpA |
NF033913 |
LPXTG-anchored fibronectin-binding protein FbpA; FbpA, a fibronectin-binding protein described ... |
1486-1655 |
4.82e-03 |
|
LPXTG-anchored fibronectin-binding protein FbpA; FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
Pssm-ID: 468243 [Multi-domain] Cd Length: 386 Bit Score: 41.59 E-value: 4.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1486 TSSSPKKAPATPAPmgAPTLPAVipsspKEVPATPSSRRDPIAPtATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIP 1565
Cdd:NF033913 160 TTDSPEETPSSETP--APSIPAL-----PEAPAQSAESEEPSVA-ASSEETPSPETPAAPETPEEPAAPAPSPESEPSVA 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1566 TPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLipPAVTSPSpkeaptppavtppspekgPATPAPKGTPTSPPVTPS 1645
Cdd:NF033913 232 ASSEETPSPSTPAAPETPAESEAPAQPAESEESSV--AATTSPS------------------PSTPAESETQTPPAVTKD 291
|
170
....*....|
gi 1476587933 1646 SlkDSPTSPA 1655
Cdd:NF033913 292 S--DKPSSAA 299
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
1415-1654 |
5.22e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 41.84 E-value: 5.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1415 APATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAP 1494
Cdd:PLN03209 311 APLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTP 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1495 ATPAPMGAPTLPAV-IPSSPKEVPATPSSRRDPIAPTATLLSKKTP--ATLAPKEALIPPamTVPSPK-KTPAIPTPKEA 1570
Cdd:PLN03209 391 PSSSPASSKSVDAVaKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRplSPYARYEDLKPP--TSPSPTaPTGVSPSVSST 468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1571 PATPSSKEasSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDS 1650
Cdd:PLN03209 469 SSVPAVPD--TAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQH 546
|
....
gi 1476587933 1651 PTSP 1654
Cdd:PLN03209 547 HAQP 550
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
5-121 |
5.46e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.62 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 5 ATETVPATEQELPQPQAETAVLPMSSALSVTAAlgQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEvPFPQ 84
Cdd:PRK14951 379 KTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAA--SAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAP-PAQA 455
|
90 100 110
....*....|....*....|....*....|....*..
gi 1476587933 85 SSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASP 121
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
1458-1829 |
5.67e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 42.06 E-value: 5.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1458 TPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKK 1537
Cdd:pfam03154 176 AQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMTQP 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1538 TPATLAPKEALIPPAMTVP----------SPKKTPAIPTPKEAPATPSSKEASSPPAvtPSTYKGAPSPKELLIPPAVTS 1607
Cdd:pfam03154 256 PPPSQVSPQPLPQPSLHGQmppmphslqtGPSHMQHPVPPQPFPLTPQSSQSQVPPG--PSPAAPGQSQQRIHTPPSQSQ 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1608 PSPKEAPTPPAVTPPSPEKgPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVA 1687
Cdd:pfam03154 334 LQSQQPPREQPLPPAPLSM-PHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHP 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1688 PA----PESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLA 1763
Cdd:pfam03154 413 PPlqlmPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGI 492
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1476587933 1764 PPESKASTPLTaaafekvLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPS 1829
Cdd:pfam03154 493 QPPSSASVSSS-------GPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPTVVNTPS 551
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
810-936 |
7.09e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 41.30 E-value: 7.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 810 TKKGSAGPDTPIGN-LSSPVSPVEASFLPENSLsfQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTP 888
Cdd:PRK14971 368 DASGGRGPKQHIKPvFTQPAAAPQPSAAAAASP--SPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQ 445
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1476587933 889 SVVNLPFPKEGPATPApkQAPALSMTSSSPKKARATPAPKGIPASPSP 936
Cdd:PRK14971 446 AVRPAQFKEEKKIPVS--KVSSLGPSTLRPIQEKAEQATGNIKEAPTG 491
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
874-1076 |
7.19e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 7.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 874 SPKGVTLPPKETPTPSVVnlpfpKEGPATPAPKQAPAlsMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGG 953
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAA-----APAAAAPAPAAPPA--APAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPG 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 954 PATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAS 1033
Cdd:PRK12323 446 GAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAES 525
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1476587933 1034 TPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSL 1076
Cdd:PRK12323 526 IPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRA 568
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1235-1556 |
9.40e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.31 E-value: 9.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1235 PSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPA-----------T 1303
Cdd:PHA03307 106 PTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAAlplsspeetarA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1304 SPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPA 1383
Cdd:PHA03307 186 PSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITL 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1384 MTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSkgdltPPAVTPVSLKKAPATSAPKGGPATPSSKG 1463
Cdd:PHA03307 266 PTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSS-----PRASSSSSSSRESSSSSTSSSSESSRGAA 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476587933 1464 DPtlPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLA 1543
Cdd:PHA03307 341 VS--PGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLD 418
|
330
....*....|...
gi 1476587933 1544 PKEALIPPAMTVP 1556
Cdd:PHA03307 419 AGAASGAFYARYP 431
|
|
| |
