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Conserved domains on  [gi|1396658827|ref|NP_001351057|]
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catenin delta-2 isoform 6 [Homo sapiens]

Protein Classification

armadillo/beta-catenin-like repeat-containing protein( domain architecture ID 12192474)

armadillo/beta-catenin-like repeat-containing protein similar to catenin delta and plakophilin

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 244-284 1.93e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 50.89  E-value: 1.93e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1396658827  244 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVY 284
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 288-329 6.59e-08

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


:

Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 49.38  E-value: 6.59e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1396658827 288 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 329
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 573-608 8.91e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 48.96  E-value: 8.91e-08
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1396658827  573 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 608
Cdd:smart00185   5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 497-538 1.25e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


:

Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.83  E-value: 1.25e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1396658827 497 PPKGIQMLWHPSIVKPYLTLLSeCSNPDTLEGAAGALQNLAA 538
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
PLN03200 super family cl33659
cellulose synthase-interactive protein; Provisional
 213-386 2.45e-03

cellulose synthase-interactive protein; Provisional


The actual alignment was detected with superfamily member PLN03200:

Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 42.01  E-value: 2.45e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827  213 PELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNK 292
Cdd:PLN03200   147 PSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISK 226

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827  293 IAlkNCGGIPALVRLLRKTTDLEIRELVTGVLWNLS--SCDALKMPIIQDALAVLTNAVIIPHSGWensplqddrkIQLH 370
Cdd:PLN03200   227 VL--DAGAVKQLLKLLGQGNEVSVRAEAAGALEALSsqSKEAKQAIADAGGIPALINATVAPSKEF----------MQGE 294

                          170
                   ....*....|....*..
gi 1396658827  371 SSQVLR-NATGCLRNVS 386
Cdd:PLN03200   295 FAQALQeNAMGALANIC 311
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 662-706 3.46e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 35.87  E-value: 3.46e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1396658827  662 NMENAKALRDAGGIEKLVGISKSkgdkHSPKVVKAASQVLNSMWQ 706
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKS----EDEEVVKEAAWALSNLSS 41
 
Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 244-284 1.93e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 50.89  E-value: 1.93e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1396658827  244 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVY 284
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 288-329 6.59e-08

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 49.38  E-value: 6.59e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1396658827 288 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 329
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 288-329 7.25e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 7.25e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1396658827  288 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 329
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELL-KSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 573-608 8.91e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 48.96  E-value: 8.91e-08
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1396658827  573 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 608
Cdd:smart00185   5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 244-283 6.40e-07

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 46.68  E-value: 6.40e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1396658827 244 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLV 283
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 497-538 1.25e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.83  E-value: 1.25e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1396658827 497 PPKGIQMLWHPSIVKPYLTLLSeCSNPDTLEGAAGALQNLAA 538
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 573-608 3.28e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 41.67  E-value: 3.28e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1396658827 573 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 608
Cdd:pfam00514   5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 227-329 2.44e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 45.09  E-value: 2.44e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827  227 PSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRmTEVHRSACGALRNLVYGKaNDDNKIALKNCGGIPALVR 306
Cdd:PLN03200   418 ADVQEELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLS-SEQQQEYAVALLAILTDE-VDESKWAITAAGGIPPLVQ 495

                           90       100
                   ....*....|....*....|...
gi 1396658827  307 LLrKTTDLEIRELVTGVLWNLSS 329
Cdd:PLN03200   496 LL-ETGSQKAKEDSATVLWNLCC 517
HEAT COG1413
HEAT repeat [General function prediction only];
211-327 8.44e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 40.38  E-value: 8.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827 211 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNlvygkand 289
Cdd:COG1413    44 GDPRaVPALLEALKDPDPEVRAAAAEAL-----------GRIGDPEAVPALIAALKDEDPEVRRAAAEALGR-------- 104

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1396658827 290 dnkiaLKNCGGIPALVRLLrKTTDLEIRELVTGVLWNL 327
Cdd:COG1413   105 -----LGDPAAVPALLEAL-KDPDWEVRRAAARALGRL 136
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 213-386 2.45e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 42.01  E-value: 2.45e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827  213 PELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNK 292
Cdd:PLN03200   147 PSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISK 226

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827  293 IAlkNCGGIPALVRLLRKTTDLEIRELVTGVLWNLS--SCDALKMPIIQDALAVLTNAVIIPHSGWensplqddrkIQLH 370
Cdd:PLN03200   227 VL--DAGAVKQLLKLLGQGNEVSVRAEAAGALEALSsqSKEAKQAIADAGGIPALINATVAPSKEF----------MQGE 294

                          170
                   ....*....|....*..
gi 1396658827  371 SSQVLR-NATGCLRNVS 386
Cdd:PLN03200   295 FAQALQeNAMGALANIC 311
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 662-706 3.46e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 35.87  E-value: 3.46e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1396658827  662 NMENAKALRDAGGIEKLVGISKSkgdkHSPKVVKAASQVLNSMWQ 706
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKS----EDEEVVKEAAWALSNLSS 41
HEAT COG1413
HEAT repeat [General function prediction only];
211-342 4.32e-03

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 38.46  E-value: 4.32e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827 211 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKAnd 289
Cdd:COG1413    13 GDPAaVPALIAALADEDPDVRAAAARAL-----------GRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEA-- 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1396658827 290 dnkialkncggIPALVRLLrKTTDLEIRELVTGVLWNLSSCDALkmPIIQDAL 342
Cdd:COG1413    80 -----------VPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV--PALLEAL 118
 
Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 244-284 1.93e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 50.89  E-value: 1.93e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1396658827  244 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVY 284
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 288-329 6.59e-08

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 49.38  E-value: 6.59e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1396658827 288 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 329
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 288-329 7.25e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 7.25e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1396658827  288 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 329
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELL-KSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 573-608 8.91e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 48.96  E-value: 8.91e-08
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1396658827  573 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 608
Cdd:smart00185   5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 244-283 6.40e-07

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 46.68  E-value: 6.40e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1396658827 244 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLV 283
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 497-538 1.25e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.83  E-value: 1.25e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1396658827 497 PPKGIQMLWHPSIVKPYLTLLSeCSNPDTLEGAAGALQNLAA 538
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 573-608 3.28e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 41.67  E-value: 3.28e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1396658827 573 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 608
Cdd:pfam00514   5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 227-329 2.44e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 45.09  E-value: 2.44e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827  227 PSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRmTEVHRSACGALRNLVYGKaNDDNKIALKNCGGIPALVR 306
Cdd:PLN03200   418 ADVQEELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLS-SEQQQEYAVALLAILTDE-VDESKWAITAAGGIPPLVQ 495

                           90       100
                   ....*....|....*....|...
gi 1396658827  307 LLrKTTDLEIRELVTGVLWNLSS 329
Cdd:PLN03200   496 LL-ETGSQKAKEDSATVLWNLCC 517
HEAT COG1413
HEAT repeat [General function prediction only];
211-327 8.44e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 40.38  E-value: 8.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827 211 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNlvygkand 289
Cdd:COG1413    44 GDPRaVPALLEALKDPDPEVRAAAAEAL-----------GRIGDPEAVPALIAALKDEDPEVRRAAAEALGR-------- 104

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1396658827 290 dnkiaLKNCGGIPALVRLLrKTTDLEIRELVTGVLWNL 327
Cdd:COG1413   105 -----LGDPAAVPALLEAL-KDPDWEVRRAAARALGRL 136
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 213-386 2.45e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 42.01  E-value: 2.45e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827  213 PELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNK 292
Cdd:PLN03200   147 PSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISK 226

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827  293 IAlkNCGGIPALVRLLRKTTDLEIRELVTGVLWNLS--SCDALKMPIIQDALAVLTNAVIIPHSGWensplqddrkIQLH 370
Cdd:PLN03200   227 VL--DAGAVKQLLKLLGQGNEVSVRAEAAGALEALSsqSKEAKQAIADAGGIPALINATVAPSKEF----------MQGE 294

                          170
                   ....*....|....*..
gi 1396658827  371 SSQVLR-NATGCLRNVS 386
Cdd:PLN03200   295 FAQALQeNAMGALANIC 311
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 662-706 3.46e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 35.87  E-value: 3.46e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1396658827  662 NMENAKALRDAGGIEKLVGISKSkgdkHSPKVVKAASQVLNSMWQ 706
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKS----EDEEVVKEAAWALSNLSS 41
HEAT COG1413
HEAT repeat [General function prediction only];
211-342 4.32e-03

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 38.46  E-value: 4.32e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396658827 211 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKAnd 289
Cdd:COG1413    13 GDPAaVPALIAALADEDPDVRAAAARAL-----------GRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEA-- 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1396658827 290 dnkialkncggIPALVRLLrKTTDLEIRELVTGVLWNLSSCDALkmPIIQDAL 342
Cdd:COG1413    80 -----------VPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV--PALLEAL 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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