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Conserved domains on  [gi|1391723613|ref|NP_001350452|]
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2-oxoglutarate dehydrogenase complex component E1 isoform 4 precursor [Homo sapiens]

Protein Classification

2-oxoglutarate dehydrogenase family protein( domain architecture ID 11426267)

2-oxoglutarate dehydrogenase family protein, such as 2-oxoglutarate dehydrogenase subunit E1 that catalyzes the decarboxylation of 2-oxoglutarate and the formation of TPP-hydroxysuccinate

EC:  1.2.4.2
Gene Ontology:  GO:0004591|GO:0030976
PubMed:  24077172|12631263
SCOP:  3001790

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
SucA COG0567
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes ...
49-1027 0e+00

2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]; 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes is part of the Pathway/BioSystem: TCA cycle


:

Pssm-ID: 440333 [Multi-domain]  Cd Length: 935  Bit Score: 1320.08  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQpnVDKLVEDHL 128
Cdd:COG0567     11 FLSGANAAYIEELYEQYLEDPDSVDPSWRAFFDGLPDVPGARDFAHSPIREEFRKLAKNGAGAAASAAA--DPEAARKQV 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  129 AVQSLIRAYQVRGHHIAKLDPLGIscvnfddAPVTVSSNVDLAvfkerlrmltvggFYGLDESDLDKVFHlpTTTFIGGQ 208
Cdd:COG0567     89 RVLQLINAYRVRGHLFAKLDPLGL-------RERPYVPELDPA-------------FYGLTEADLDTVFN--TGSLLGLE 146
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  209 EsaLPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETP-GIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEK 287
Cdd:COG0567    147 T--ATLREIIAALKETYCGSIGVEYMHISDPEEKRWIQERLESTrNRPSFSAEEKKRILEKLTAAEGFEKFLHTKYVGQK 224
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  288 RFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGmYHR 367
Cdd:COG0567    225 RFSLEGGESLIPALDELIERAGELGVKEIVIGMAHRGRLNVLVNILGKPPRDIFSEFEGKSAEDVLGSGDVKYHLG-FSS 303
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  368 riNRVTD-RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTH 446
Cdd:COG0567    304 --DVETPgGKVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDTDRDKVLPILIHGDAAFAGQGVVYETLNMSQLRGYRTG 381
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  447 GTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNE 526
Cdd:COG0567    382 GTIHIVINNQIGFTTSPRDARSSTYCTDVAKMVQAPIFHVNGDDPEAVVFVARLALDYRQKFKKDVVIDLVCYRRHGHNE 461
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  527 MDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKdEKILHIKHWLDSPWPGFFTL 606
Cdd:COG0567    462 GDEPAFTQPLMYKKIKKHPTTREIYADKLVAEGVITAEEADEMVDEYRAALDEGFEVVK-EYKPNKADWLEGDWSPYRRL 540
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  607 dGQPRSMSCPsTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMV-KNRTVDWALAEYMAFGSLLKEGIHIRLS 685
Cdd:COG0567    541 -GEDWDDPVD-TGVPLEKLKELGEKLTTLP-EGFKLHPKVEKILEDRRKMAeGEKPLDWGMAEALAYASLLDEGYPVRLS 617
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  686 GQDVERGTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTA 765
Cdd:COG0567    618 GQDSGRGTFSHRHAVLHDQK-TGETYVPLNHLSEGQARFEVYNSLLSEEAVLGFEYGYALAEPNTLVIWEAQFGDFANGA 696
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  766 QCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCST 845
Cdd:COG0567    697 QVVIDQFISSGESKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPTT 756
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  846 PGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGtHFQRVIPEDGPAaqNPENVKRLLFCTGKVYYDLT- 924
Cdd:COG0567    757 PAQYFHLLRRQMKRPFRKPLIVMTPKSLLRHKLAVSSLEELAEG-SFQEVIDDTDEL--DPKKVKRVVLCSGKVYYDLLe 833
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  925 --RERKARDmvgqVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDP 1001
Cdd:COG0567    834 erRERGRDD----VAIVRIEQLYPFPEEELAAELAKYPNAkEVVWCQEEPKNMGAWYFIQHRLEEVLPKGQRLRYAGRPA 909
                          970       980
                   ....*....|....*....|....*.
gi 1391723613 1002 AAAPATGNKKTHLTELQRLLDTAFDL 1027
Cdd:COG0567    910 SASPATGYMSVHKAEQKALVEEALGI 935
 
Name Accession Description Interval E-value
SucA COG0567
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes ...
49-1027 0e+00

2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]; 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440333 [Multi-domain]  Cd Length: 935  Bit Score: 1320.08  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQpnVDKLVEDHL 128
Cdd:COG0567     11 FLSGANAAYIEELYEQYLEDPDSVDPSWRAFFDGLPDVPGARDFAHSPIREEFRKLAKNGAGAAASAAA--DPEAARKQV 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  129 AVQSLIRAYQVRGHHIAKLDPLGIscvnfddAPVTVSSNVDLAvfkerlrmltvggFYGLDESDLDKVFHlpTTTFIGGQ 208
Cdd:COG0567     89 RVLQLINAYRVRGHLFAKLDPLGL-------RERPYVPELDPA-------------FYGLTEADLDTVFN--TGSLLGLE 146
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  209 EsaLPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETP-GIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEK 287
Cdd:COG0567    147 T--ATLREIIAALKETYCGSIGVEYMHISDPEEKRWIQERLESTrNRPSFSAEEKKRILEKLTAAEGFEKFLHTKYVGQK 224
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  288 RFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGmYHR 367
Cdd:COG0567    225 RFSLEGGESLIPALDELIERAGELGVKEIVIGMAHRGRLNVLVNILGKPPRDIFSEFEGKSAEDVLGSGDVKYHLG-FSS 303
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  368 riNRVTD-RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTH 446
Cdd:COG0567    304 --DVETPgGKVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDTDRDKVLPILIHGDAAFAGQGVVYETLNMSQLRGYRTG 381
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  447 GTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNE 526
Cdd:COG0567    382 GTIHIVINNQIGFTTSPRDARSSTYCTDVAKMVQAPIFHVNGDDPEAVVFVARLALDYRQKFKKDVVIDLVCYRRHGHNE 461
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  527 MDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKdEKILHIKHWLDSPWPGFFTL 606
Cdd:COG0567    462 GDEPAFTQPLMYKKIKKHPTTREIYADKLVAEGVITAEEADEMVDEYRAALDEGFEVVK-EYKPNKADWLEGDWSPYRRL 540
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  607 dGQPRSMSCPsTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMV-KNRTVDWALAEYMAFGSLLKEGIHIRLS 685
Cdd:COG0567    541 -GEDWDDPVD-TGVPLEKLKELGEKLTTLP-EGFKLHPKVEKILEDRRKMAeGEKPLDWGMAEALAYASLLDEGYPVRLS 617
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  686 GQDVERGTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTA 765
Cdd:COG0567    618 GQDSGRGTFSHRHAVLHDQK-TGETYVPLNHLSEGQARFEVYNSLLSEEAVLGFEYGYALAEPNTLVIWEAQFGDFANGA 696
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  766 QCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCST 845
Cdd:COG0567    697 QVVIDQFISSGESKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPTT 756
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  846 PGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGtHFQRVIPEDGPAaqNPENVKRLLFCTGKVYYDLT- 924
Cdd:COG0567    757 PAQYFHLLRRQMKRPFRKPLIVMTPKSLLRHKLAVSSLEELAEG-SFQEVIDDTDEL--DPKKVKRVVLCSGKVYYDLLe 833
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  925 --RERKARDmvgqVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDP 1001
Cdd:COG0567    834 erRERGRDD----VAIVRIEQLYPFPEEELAAELAKYPNAkEVVWCQEEPKNMGAWYFIQHRLEEVLPKGQRLRYAGRPA 909
                          970       980
                   ....*....|....*....|....*.
gi 1391723613 1002 AAAPATGNKKTHLTELQRLLDTAFDL 1027
Cdd:COG0567    910 SASPATGYMSVHKAEQKALVEEALGI 935
sucA PRK09404
2-oxoglutarate dehydrogenase E1 component; Reviewed
49-1026 0e+00

2-oxoglutarate dehydrogenase E1 component; Reviewed


Pssm-ID: 236499 [Multi-domain]  Cd Length: 924  Bit Score: 1271.20  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAyqsplplsrgsLAAVAHAQSLVEAQPNVDKLVEDHL 128
Cdd:PRK09404    13 FLFGANAAYIEELYEQYLKDPDSVDEEWRAFFDGLPGVAPDVAH-----------SAVRESFRRLAKPARVSSAVSDPQV 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  129 AVQSLIRAYQVRGHHIAKLDPLGIscvnfddAPVTVSSNVDLAvfkerlrmltvggFYGLDESDLDKVFHlpTTTFIGGQ 208
Cdd:PRK09404    82 KVLQLINAYRFRGHLAANLDPLGL-------WKRPDVPELDPA-------------FYGLTEADLDRTFN--TGSLALGK 139
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  209 ESAlPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGImQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKR 288
Cdd:PRK09404   140 ETA-TLREIIEALKKTYCGSIGVEYMHISDPEERRWLQQRIESGRP-SFSAEEKKAILERLTAAEGFERFLHTKFVGQKR 217
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  289 FGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-EGSGDVKYHLGmYHR 367
Cdd:PRK09404   218 FSLEGGESLIPMLDEIIRRAGKLGVKEIVIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEvLGSGDVKYHLG-FSS 296
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  368 riNRVTD-RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTT 445
Cdd:PRK09404   297 --DRETDgGEVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDgQDRKKVLPILIHGDAAFAGQGVVAETLNLSQLRGYRT 374
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  446 HGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHN 525
Cdd:PRK09404   375 GGTIHIVINNQIGFTTSPPDDRSTPYCTDVAKMVQAPIFHVNGDDPEAVVFATRLALEYRQKFKKDVVIDLVCYRRHGHN 454
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  526 EMDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKDEKilhIKHWLDSPWPGFFT 605
Cdd:PRK09404   455 EGDEPSFTQPLMYKKIKKHPTTRELYADKLVAEGVITEEEADEMVNEYRDALDAGFEVVKEWR---PADWLAGDWSPYLG 531
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  606 LDGQPRsmscPSTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVK-NRTVDWALAEYMAFGSLLKEGIHIRL 684
Cdd:PRK09404   532 HEWDDP----VDTGVPLERLKELAEKLTTVP-EGFKVHPKVKKILEDRREMAEgEKPIDWGMAEALAFASLLDEGYPVRL 606
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  685 SGQDVERGTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNT 764
Cdd:PRK09404   607 SGQDSGRGTFSHRHAVLHDQK-TGETYIPLNHLSEGQASFEVYDSPLSEEAVLGFEYGYSTAEPNTLVIWEAQFGDFANG 685
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  765 AQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCS 844
Cdd:PRK09404   686 AQVVIDQFISSGEQKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPT 745
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  845 TPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIPEdgPAAQNPENVKRLLFCTGKVYYDLT 924
Cdd:PRK09404   746 TPAQYFHLLRRQALRPFRKPLVVMTPKSLLRHPLAVSSLEELAEGS-FQPVIGD--IDELDPKKVKRVVLCSGKVYYDLL 822
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  925 RERKARDmVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDPAA 1003
Cdd:PRK09404   823 EARRKRG-IDDVAIVRIEQLYPFPHEELAAELAKYPNAkEVVWCQEEPKNQGAWYFIQHHLEEVLPEGQKLRYAGRPASA 901
                          970       980
                   ....*....|....*....|...
gi 1391723613 1004 APATGNKKTHLTELQRLLDTAFD 1026
Cdd:PRK09404   902 SPAVGYMSLHKKQQEALVEDALG 924
2oxo_dh_E1 TIGR00239
2-oxoglutarate dehydrogenase, E1 component; The 2-oxoglutarate dehydrogenase complex consists ...
49-1025 0e+00

2-oxoglutarate dehydrogenase, E1 component; The 2-oxoglutarate dehydrogenase complex consists of this thiamine pyrophosphate-binding subunit (E1), dihydrolipoamide succinyltransferase (E2), and lipoamide dehydrogenase (E3). The E1 ortholog from Corynebacterium glutamicum is unusual in having an N-terminal extension that resembles the dihydrolipoamide succinyltransferase (E2) component of 2-oxoglutarate dehydrogenase. [Energy metabolism, TCA cycle]


Pssm-ID: 161785 [Multi-domain]  Cd Length: 929  Bit Score: 987.06  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPnvDKLVEDHL 128
Cdd:TIGR00239    1 YLSGANQSYIEELYEDYLTDPDSVDASWRSTFDQLPGPGPAPDQFHSPTRSYFRRLAKDASRGSVTISDP--DTNVSQVK 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  129 AVQsLIRAYQVRGHHIAKLDPLGiscvNFDdapVTVSSNVDLAvfkerlrmltvggFYGLDESDLDKVFHLPTTTFIGGQ 208
Cdd:TIGR00239   79 VLQ-LIRAYRFRGHLHANLDPLG----LKQ---QDKVPELDLS-------------FYGLTEADLQETFNIGSFVSGKDA 137
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  209 ESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKR 288
Cdd:TIGR00239  138 TMKLSNLELLQALKQTYCGSIGAEYMHITSTEEKRWLQQRIESGERAQFNSEEKKRFLSRLTAAEGFERFLGAKFPGAKR 217
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  289 FGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-EGSGDVKYHLGMYHR 367
Cdd:TIGR00239  218 FSLEGLDALVPMLKEIIRHSVNSGTRDVVLGMAHRGRLNVLVNVLGKPPEDIFSEFAGKHKSHLpDGTGDVKYHMGRFSS 297
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  368 RINrVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTH 446
Cdd:TIGR00239  298 DFT-TDGKLVHLALAFNPSHLEIVSPVVIGSTRARLDRLNDsPESTKVLAILIHGDAAFAGQGVVQETLNMSKLRGYSVG 376
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  447 GTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNE 526
Cdd:TIGR00239  377 GTIHIIINNQIGFTTNPLDARSTPYCSDLAKMIQAPIFHVNADDPEAVAFATRLAVEYRNTFKRDVFIDLVGYRRHGHNE 456
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  527 MDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNqpeyEEEISKYDKICEEAFARSKDeKILHIKHWLDSPWPGFFTL 606
Cdd:TIGR00239  457 ADEPSATQPLMYQKIKKHPTPRKVYADKLVSEGVAT----EEDVTEMVNLYRDALEAADC-VVPSWREMNTASFTWSPEL 531
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  607 DgQPRSMSCPSTgLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVK--NRTVDWALAEYMAFGSLLKEGIHIRL 684
Cdd:TIGR00239  532 N-HEWDEEYPNK-VEMKRLQELAKRISEVP-EGVEMHSRVAKIYFDRTKAMAagEKLFDWGGAENLAFATLVDDGIPVRL 608
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  685 SGQDVERGTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNT 764
Cdd:TIGR00239  609 SGEDSERGTFFQRHAVLHDQS-NGSTYTPLQHLHNGQGAFRVWNSVLSEESVLGFEYGYATTSPRTLVIWEAQFGDFANG 687
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  765 AQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCS 844
Cdd:TIGR00239  688 AQVVIDQFISSGEQKWGQMSGLVMLLPHGYEGQGPEHSSGRLERFLQLAAEQ--------------------NMQVCVPT 747
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  845 TPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIP--EDGPAAQNPENVKRLLFCTGKVYYD 922
Cdd:TIGR00239  748 TPAQVFHILRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELAEGT-FQPVIGeiEESGLSLDPEGVKRLVLCSGKVYYD 826
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  923 LtRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPN-AELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDP 1001
Cdd:TIGR00239  827 L-HEQRRKNGQKDVAIVRIEQLYPFPHKAVKEVLQQYPNlKEIVWCQEEPLNMGAWYYSQPHLREVIPEGVSVRYAGRPA 905
                          970       980
                   ....*....|....*....|....
gi 1391723613 1002 AAAPATGNKKTHLTELQRLLDTAF 1025
Cdd:TIGR00239  906 SASPAVGYMSLHQKQQQDLLNDAL 929
TPP_E1_OGDC_like cd02016
Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed ...
275-538 2.30e-179

Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA and carbon dioxide, a key reaction of the tricarboxylic acid cycle.


Pssm-ID: 238974 [Multi-domain]  Cd Length: 265  Bit Score: 522.09  E-value: 2.30e-179
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  275 FEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-- 352
Cdd:cd02016      1 FEQFLATKFPGQKRFGLEGAESLIPALDELIDRAAELGVEEVVIGMAHRGRLNVLANVLGKPLEQIFSEFEGKSEFPEdd 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  353 EGSGDVKYHLGMYHRRINRVtDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVY 432
Cdd:cd02016     81 EGSGDVKYHLGYSSDRKTPS-GKKVHLSLAPNPSHLEAVNPVVMGKTRAKQDYRGDGERDKVLPILIHGDAAFAGQGVVY 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  433 ETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDV 512
Cdd:cd02016    160 ETLNLSNLPGYTTGGTIHIVVNNQIGFTTDPRDSRSSPYCTDVAKMIGAPIFHVNGDDPEAVVRATRLALEYRQKFKKDV 239
                          250       260
                   ....*....|....*....|....*.
gi 1391723613  513 VVDLVCYRRNGHNEMDEPMFTQPLMY 538
Cdd:cd02016    240 VIDLVCYRRHGHNELDEPSFTQPLMY 265
E1_dh pfam00676
Dehydrogenase E1 component; This family uses thiamine pyrophosphate as a cofactor. This family ...
267-593 8.69e-112

Dehydrogenase E1 component; This family uses thiamine pyrophosphate as a cofactor. This family includes pyruvate dehydrogenase, 2-oxoglutarate dehydrogenase and 2-oxoisovalerate dehydrogenase.


Pssm-ID: 395548 [Multi-domain]  Cd Length: 300  Bit Score: 348.16  E-value: 8.69e-112
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  267 ARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGvDYVIMGmpHRGRLNVLANVIRkeLEQIFCQFDS 346
Cdd:pfam00676    1 RRMMTLRRMEDARDALYKRQGIRGFYHLYAGQEAAQVGIAAALEPG-DYIIPG--YRDHGNLLARGLS--LEEIFAELYG 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  347 KLEaadEGSGDVKYhlGMYHRRINRVTDRNITLSLVANpshlEAADPVVMGKTkaeqfycgdtEGKKVMSILLHGDAAfA 426
Cdd:pfam00676   76 RVA---KGKGGSMH--GYYGAKGNRFYGGNGILGAQVP----LGAGIALAAKY----------RGKKEVAITLYGDGA-A 135
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  427 GQGIVYETFHLSDLPSYTThgtVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRS 506
Cdd:pfam00676  136 NQGDFFEGLNFAALWKLPV---IFVCENNQYGISTPAERASASTTYADRARGYGIPGLHVDGMDPLAVYQASKFAAERAR 212
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  507 TFHKDVVVDLVCYRRNGHNEMDEPMFTQ-PLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSK 585
Cdd:pfam00676  213 TGKGPFLIELVTYRYGGHSMSDDPSTYRtRDEYEEVRKKKDPIQRFKEHLVSKGVWSEEELKAIEKEVRKEVEEAFKKAE 292

                   ....*...
gi 1391723613  586 DEKILHIK 593
Cdd:pfam00676  293 SAPEPHPE 300
Transket_pyr smart00861
Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer ...
728-875 4.24e-22

Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Hansenula polymorpha, there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates.


Pssm-ID: 214865 [Multi-domain]  Cd Length: 136  Bit Score: 92.93  E-value: 4.24e-22
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   728 NSSLSEYGVLGFELGFAMAspnALVLWEAQFGDFHNTAQCIIDQFICpgqakWVRQNGIVLLLPHGMEGM-GPEHSSARP 806
Cdd:smart00861   19 DTGIAEQAMVGFAAGLALH---GLRPVVEIFFTFFDRAKDQIRSAGA-----SGNVPVVFRHDGGGGVGEdGPTHHSIED 90
                            90       100       110       120       130       140       150
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   807 E-RFLQMcnddpdvlpdlkeanfdinqlydCNWVVVNCSTPGNFFHVLRRQILLPfRKPLIIFTPKSLLR 875
Cdd:smart00861   91 EaLLRAI-----------------------PGLKVVAPSDPAEAKGLLRAAIRDD-GPVVIRLERKSLYR 136
 
Name Accession Description Interval E-value
SucA COG0567
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes ...
49-1027 0e+00

2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]; 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440333 [Multi-domain]  Cd Length: 935  Bit Score: 1320.08  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQpnVDKLVEDHL 128
Cdd:COG0567     11 FLSGANAAYIEELYEQYLEDPDSVDPSWRAFFDGLPDVPGARDFAHSPIREEFRKLAKNGAGAAASAAA--DPEAARKQV 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  129 AVQSLIRAYQVRGHHIAKLDPLGIscvnfddAPVTVSSNVDLAvfkerlrmltvggFYGLDESDLDKVFHlpTTTFIGGQ 208
Cdd:COG0567     89 RVLQLINAYRVRGHLFAKLDPLGL-------RERPYVPELDPA-------------FYGLTEADLDTVFN--TGSLLGLE 146
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  209 EsaLPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETP-GIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEK 287
Cdd:COG0567    147 T--ATLREIIAALKETYCGSIGVEYMHISDPEEKRWIQERLESTrNRPSFSAEEKKRILEKLTAAEGFEKFLHTKYVGQK 224
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  288 RFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGmYHR 367
Cdd:COG0567    225 RFSLEGGESLIPALDELIERAGELGVKEIVIGMAHRGRLNVLVNILGKPPRDIFSEFEGKSAEDVLGSGDVKYHLG-FSS 303
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  368 riNRVTD-RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTH 446
Cdd:COG0567    304 --DVETPgGKVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDTDRDKVLPILIHGDAAFAGQGVVYETLNMSQLRGYRTG 381
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  447 GTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNE 526
Cdd:COG0567    382 GTIHIVINNQIGFTTSPRDARSSTYCTDVAKMVQAPIFHVNGDDPEAVVFVARLALDYRQKFKKDVVIDLVCYRRHGHNE 461
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  527 MDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKdEKILHIKHWLDSPWPGFFTL 606
Cdd:COG0567    462 GDEPAFTQPLMYKKIKKHPTTREIYADKLVAEGVITAEEADEMVDEYRAALDEGFEVVK-EYKPNKADWLEGDWSPYRRL 540
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  607 dGQPRSMSCPsTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMV-KNRTVDWALAEYMAFGSLLKEGIHIRLS 685
Cdd:COG0567    541 -GEDWDDPVD-TGVPLEKLKELGEKLTTLP-EGFKLHPKVEKILEDRRKMAeGEKPLDWGMAEALAYASLLDEGYPVRLS 617
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  686 GQDVERGTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTA 765
Cdd:COG0567    618 GQDSGRGTFSHRHAVLHDQK-TGETYVPLNHLSEGQARFEVYNSLLSEEAVLGFEYGYALAEPNTLVIWEAQFGDFANGA 696
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  766 QCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCST 845
Cdd:COG0567    697 QVVIDQFISSGESKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPTT 756
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  846 PGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGtHFQRVIPEDGPAaqNPENVKRLLFCTGKVYYDLT- 924
Cdd:COG0567    757 PAQYFHLLRRQMKRPFRKPLIVMTPKSLLRHKLAVSSLEELAEG-SFQEVIDDTDEL--DPKKVKRVVLCSGKVYYDLLe 833
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  925 --RERKARDmvgqVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDP 1001
Cdd:COG0567    834 erRERGRDD----VAIVRIEQLYPFPEEELAAELAKYPNAkEVVWCQEEPKNMGAWYFIQHRLEEVLPKGQRLRYAGRPA 909
                          970       980
                   ....*....|....*....|....*.
gi 1391723613 1002 AAAPATGNKKTHLTELQRLLDTAFDL 1027
Cdd:COG0567    910 SASPATGYMSVHKAEQKALVEEALGI 935
sucA PRK09404
2-oxoglutarate dehydrogenase E1 component; Reviewed
49-1026 0e+00

2-oxoglutarate dehydrogenase E1 component; Reviewed


Pssm-ID: 236499 [Multi-domain]  Cd Length: 924  Bit Score: 1271.20  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAyqsplplsrgsLAAVAHAQSLVEAQPNVDKLVEDHL 128
Cdd:PRK09404    13 FLFGANAAYIEELYEQYLKDPDSVDEEWRAFFDGLPGVAPDVAH-----------SAVRESFRRLAKPARVSSAVSDPQV 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  129 AVQSLIRAYQVRGHHIAKLDPLGIscvnfddAPVTVSSNVDLAvfkerlrmltvggFYGLDESDLDKVFHlpTTTFIGGQ 208
Cdd:PRK09404    82 KVLQLINAYRFRGHLAANLDPLGL-------WKRPDVPELDPA-------------FYGLTEADLDRTFN--TGSLALGK 139
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  209 ESAlPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGImQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKR 288
Cdd:PRK09404   140 ETA-TLREIIEALKKTYCGSIGVEYMHISDPEERRWLQQRIESGRP-SFSAEEKKAILERLTAAEGFERFLHTKFVGQKR 217
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  289 FGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-EGSGDVKYHLGmYHR 367
Cdd:PRK09404   218 FSLEGGESLIPMLDEIIRRAGKLGVKEIVIGMAHRGRLNVLVNVLGKPPRDLFAEFEGKHGPDEvLGSGDVKYHLG-FSS 296
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  368 riNRVTD-RNITLSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTT 445
Cdd:PRK09404   297 --DRETDgGEVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDgQDRKKVLPILIHGDAAFAGQGVVAETLNLSQLRGYRT 374
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  446 HGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHN 525
Cdd:PRK09404   375 GGTIHIVINNQIGFTTSPPDDRSTPYCTDVAKMVQAPIFHVNGDDPEAVVFATRLALEYRQKFKKDVVIDLVCYRRHGHN 454
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  526 EMDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKDEKilhIKHWLDSPWPGFFT 605
Cdd:PRK09404   455 EGDEPSFTQPLMYKKIKKHPTTRELYADKLVAEGVITEEEADEMVNEYRDALDAGFEVVKEWR---PADWLAGDWSPYLG 531
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  606 LDGQPRsmscPSTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVK-NRTVDWALAEYMAFGSLLKEGIHIRL 684
Cdd:PRK09404   532 HEWDDP----VDTGVPLERLKELAEKLTTVP-EGFKVHPKVKKILEDRREMAEgEKPIDWGMAEALAFASLLDEGYPVRL 606
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  685 SGQDVERGTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNT 764
Cdd:PRK09404   607 SGQDSGRGTFSHRHAVLHDQK-TGETYIPLNHLSEGQASFEVYDSPLSEEAVLGFEYGYSTAEPNTLVIWEAQFGDFANG 685
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  765 AQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCS 844
Cdd:PRK09404   686 AQVVIDQFISSGEQKWGRLSGLVMLLPHGYEGQGPEHSSARLERFLQLCAED--------------------NMQVCNPT 745
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  845 TPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIPEdgPAAQNPENVKRLLFCTGKVYYDLT 924
Cdd:PRK09404   746 TPAQYFHLLRRQALRPFRKPLVVMTPKSLLRHPLAVSSLEELAEGS-FQPVIGD--IDELDPKKVKRVVLCSGKVYYDLL 822
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  925 RERKARDmVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDPAA 1003
Cdd:PRK09404   823 EARRKRG-IDDVAIVRIEQLYPFPHEELAAELAKYPNAkEVVWCQEEPKNQGAWYFIQHHLEEVLPEGQKLRYAGRPASA 901
                          970       980
                   ....*....|....*....|...
gi 1391723613 1004 APATGNKKTHLTELQRLLDTAFD 1026
Cdd:PRK09404   902 SPAVGYMSLHKKQQEALVEDALG 924
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
117-1027 0e+00

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 1020.59  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  117 QPNVDKLVEDHLAVQSLIRAYQVRGHHIAKLDPLGIscvnfddapvTVSSNVDLAVfkerlrmltvgGFYGLDESDLDKV 196
Cdd:PRK12270   376 PADHEDEVDKNARVMELIHAYRVRGHLMADTDPLEY----------RQRSHPDLDV-----------LTHGLTLWDLDRE 434
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  197 FhlPTTTFiGGQESaLPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPgIMQFTNEEKRTLLARLVRSTRFE 276
Cdd:PRK12270   435 F--PVGGF-GGKER-MKLRDILGVLRDSYCRTVGIEYMHIQDPEQRRWLQERVERP-HEKPTREEQKRILSKLNAAEAFE 509
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  277 EFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLE-AADEGS 355
Cdd:PRK12270   510 TFLQTKYVGQKRFSLEGGESLIPLLDAVLDQAAEHGLDEVVIGMAHRGRLNVLANIVGKPYSQIFREFEGNLDpRSAQGS 589
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  356 GDVKYHLG---MYHRrinrVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIV 431
Cdd:PRK12270   590 GDVKYHLGaegTFTQ----MFGDEIKVSLAANPSHLEAVDPVLEGIVRAKQDRLDKgEEGFTVLPILLHGDAAFAGQGVV 665
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  432 YETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKD 511
Cdd:PRK12270   666 AETLNLSQLRGYRTGGTIHIVVNNQVGFTTAPESSRSSEYATDVAKMIQAPIFHVNGDDPEAVVRVARLAFEYRQRFHKD 745
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  512 VVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKDEKilh 591
Cdd:PRK12270   746 VVIDLVCYRRRGHNEGDDPSMTQPLMYDLIDAKRSVRKLYTEALIGRGDITVEEAEQALRDYQGQLERVFNEVREAE--- 822
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  592 iKHwlDSPWPGFFTLDGQPrsMSCPSTGLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVKNRTVDWALAEYMA 671
Cdd:PRK12270   823 -KK--PPEPPESVESDQGP--PAGVDTAVSAEVLERIGDAHVNLP-EGFTVHPKLKPLLEKRREMAREGGIDWAFGELLA 896
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  672 FGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCiPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNAL 751
Cdd:PRK12270   897 FGSLLLEGTPVRLSGQDSRRGTFSQRHAVLIDRETGEEYT-PLQNLSDDQGKFLVYDSLLSEYAAMGFEYGYSVERPDAL 975
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  752 VLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdin 831
Cdd:PRK12270   976 VLWEAQFGDFANGAQTIIDEFISSGEAKWGQRSGVVLLLPHGYEGQGPDHSSARIERFLQLCAEG--------------- 1040
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  832 qlydcNWVVVNCSTPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIPEdgPAAQNPENVKR 911
Cdd:PRK12270  1041 -----NMTVAQPSTPANYFHLLRRQALSGPRRPLVVFTPKSMLRLKAAVSDVEDFTEGK-FRPVIDD--PTVDDGAKVRR 1112
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  912 LLFCTGKVYYDLTRERKARDmVGQVAITRIEQLSPFPFDLLLKEVQKYPNA-ELAWCQEEHKNQGYYDYVKPRLRTTISR 990
Cdd:PRK12270  1113 VLLCSGKLYYDLAARREKDG-RDDTAIVRVEQLYPLPRAELREALARYPNAtEVVWVQEEPANQGAWPFMALNLPELLPD 1191
                          890       900       910
                   ....*....|....*....|....*....|....*..
gi 1391723613  991 AKPVWYAGRDPAAAPATGNKKTHLTELQRLLDTAFDL 1027
Cdd:PRK12270  1192 GRRLRRVSRPASASPATGSAKVHAVEQQELLDEAFAR 1228
2oxo_dh_E1 TIGR00239
2-oxoglutarate dehydrogenase, E1 component; The 2-oxoglutarate dehydrogenase complex consists ...
49-1025 0e+00

2-oxoglutarate dehydrogenase, E1 component; The 2-oxoglutarate dehydrogenase complex consists of this thiamine pyrophosphate-binding subunit (E1), dihydrolipoamide succinyltransferase (E2), and lipoamide dehydrogenase (E3). The E1 ortholog from Corynebacterium glutamicum is unusual in having an N-terminal extension that resembles the dihydrolipoamide succinyltransferase (E2) component of 2-oxoglutarate dehydrogenase. [Energy metabolism, TCA cycle]


Pssm-ID: 161785 [Multi-domain]  Cd Length: 929  Bit Score: 987.06  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   49 FLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPnvDKLVEDHL 128
Cdd:TIGR00239    1 YLSGANQSYIEELYEDYLTDPDSVDASWRSTFDQLPGPGPAPDQFHSPTRSYFRRLAKDASRGSVTISDP--DTNVSQVK 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  129 AVQsLIRAYQVRGHHIAKLDPLGiscvNFDdapVTVSSNVDLAvfkerlrmltvggFYGLDESDLDKVFHLPTTTFIGGQ 208
Cdd:TIGR00239   79 VLQ-LIRAYRFRGHLHANLDPLG----LKQ---QDKVPELDLS-------------FYGLTEADLQETFNIGSFVSGKDA 137
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  209 ESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKR 288
Cdd:TIGR00239  138 TMKLSNLELLQALKQTYCGSIGAEYMHITSTEEKRWLQQRIESGERAQFNSEEKKRFLSRLTAAEGFERFLGAKFPGAKR 217
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  289 FGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-EGSGDVKYHLGMYHR 367
Cdd:TIGR00239  218 FSLEGLDALVPMLKEIIRHSVNSGTRDVVLGMAHRGRLNVLVNVLGKPPEDIFSEFAGKHKSHLpDGTGDVKYHMGRFSS 297
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  368 RINrVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGD-TEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTH 446
Cdd:TIGR00239  298 DFT-TDGKLVHLALAFNPSHLEIVSPVVIGSTRARLDRLNDsPESTKVLAILIHGDAAFAGQGVVQETLNMSKLRGYSVG 376
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  447 GTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNE 526
Cdd:TIGR00239  377 GTIHIIINNQIGFTTNPLDARSTPYCSDLAKMIQAPIFHVNADDPEAVAFATRLAVEYRNTFKRDVFIDLVGYRRHGHNE 456
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  527 MDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNqpeyEEEISKYDKICEEAFARSKDeKILHIKHWLDSPWPGFFTL 606
Cdd:TIGR00239  457 ADEPSATQPLMYQKIKKHPTPRKVYADKLVSEGVAT----EEDVTEMVNLYRDALEAADC-VVPSWREMNTASFTWSPEL 531
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  607 DgQPRSMSCPSTgLTEDILTHIGNVASSVPvENFTIHGGLSRILKTRGEMVK--NRTVDWALAEYMAFGSLLKEGIHIRL 684
Cdd:TIGR00239  532 N-HEWDEEYPNK-VEMKRLQELAKRISEVP-EGVEMHSRVAKIYFDRTKAMAagEKLFDWGGAENLAFATLVDDGIPVRL 608
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  685 SGQDVERGTFSHRHHVLHDQNvDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNT 764
Cdd:TIGR00239  609 SGEDSERGTFFQRHAVLHDQS-NGSTYTPLQHLHNGQGAFRVWNSVLSEESVLGFEYGYATTSPRTLVIWEAQFGDFANG 687
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  765 AQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDpdvlpdlkeanfdinqlydcNWVVVNCS 844
Cdd:TIGR00239  688 AQVVIDQFISSGEQKWGQMSGLVMLLPHGYEGQGPEHSSGRLERFLQLAAEQ--------------------NMQVCVPT 747
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  845 TPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGThFQRVIP--EDGPAAQNPENVKRLLFCTGKVYYD 922
Cdd:TIGR00239  748 TPAQVFHILRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELAEGT-FQPVIGeiEESGLSLDPEGVKRLVLCSGKVYYD 826
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  923 LtRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPN-AELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRDP 1001
Cdd:TIGR00239  827 L-HEQRRKNGQKDVAIVRIEQLYPFPHKAVKEVLQQYPNlKEIVWCQEEPLNMGAWYYSQPHLREVIPEGVSVRYAGRPA 905
                          970       980
                   ....*....|....*....|....
gi 1391723613 1002 AAAPATGNKKTHLTELQRLLDTAF 1025
Cdd:TIGR00239  906 SASPAVGYMSLHQKQQQDLLNDAL 929
TPP_E1_OGDC_like cd02016
Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed ...
275-538 2.30e-179

Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA and carbon dioxide, a key reaction of the tricarboxylic acid cycle.


Pssm-ID: 238974 [Multi-domain]  Cd Length: 265  Bit Score: 522.09  E-value: 2.30e-179
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  275 FEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD-- 352
Cdd:cd02016      1 FEQFLATKFPGQKRFGLEGAESLIPALDELIDRAAELGVEEVVIGMAHRGRLNVLANVLGKPLEQIFSEFEGKSEFPEdd 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  353 EGSGDVKYHLGMYHRRINRVtDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVY 432
Cdd:cd02016     81 EGSGDVKYHLGYSSDRKTPS-GKKVHLSLAPNPSHLEAVNPVVMGKTRAKQDYRGDGERDKVLPILIHGDAAFAGQGVVY 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  433 ETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDV 512
Cdd:cd02016    160 ETLNLSNLPGYTTGGTIHIVVNNQIGFTTDPRDSRSSPYCTDVAKMIGAPIFHVNGDDPEAVVRATRLALEYRQKFKKDV 239
                          250       260
                   ....*....|....*....|....*.
gi 1391723613  513 VVDLVCYRRNGHNEMDEPMFTQPLMY 538
Cdd:cd02016    240 VIDLVCYRRHGHNELDEPSFTQPLMY 265
E1_dh pfam00676
Dehydrogenase E1 component; This family uses thiamine pyrophosphate as a cofactor. This family ...
267-593 8.69e-112

Dehydrogenase E1 component; This family uses thiamine pyrophosphate as a cofactor. This family includes pyruvate dehydrogenase, 2-oxoglutarate dehydrogenase and 2-oxoisovalerate dehydrogenase.


Pssm-ID: 395548 [Multi-domain]  Cd Length: 300  Bit Score: 348.16  E-value: 8.69e-112
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  267 ARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGvDYVIMGmpHRGRLNVLANVIRkeLEQIFCQFDS 346
Cdd:pfam00676    1 RRMMTLRRMEDARDALYKRQGIRGFYHLYAGQEAAQVGIAAALEPG-DYIIPG--YRDHGNLLARGLS--LEEIFAELYG 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  347 KLEaadEGSGDVKYhlGMYHRRINRVTDRNITLSLVANpshlEAADPVVMGKTkaeqfycgdtEGKKVMSILLHGDAAfA 426
Cdd:pfam00676   76 RVA---KGKGGSMH--GYYGAKGNRFYGGNGILGAQVP----LGAGIALAAKY----------RGKKEVAITLYGDGA-A 135
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  427 GQGIVYETFHLSDLPSYTThgtVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRS 506
Cdd:pfam00676  136 NQGDFFEGLNFAALWKLPV---IFVCENNQYGISTPAERASASTTYADRARGYGIPGLHVDGMDPLAVYQASKFAAERAR 212
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  507 TFHKDVVVDLVCYRRNGHNEMDEPMFTQ-PLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSK 585
Cdd:pfam00676  213 TGKGPFLIELVTYRYGGHSMSDDPSTYRtRDEYEEVRKKKDPIQRFKEHLVSKGVWSEEELKAIEKEVRKEVEEAFKKAE 292

                   ....*...
gi 1391723613  586 DEKILHIK 593
Cdd:pfam00676  293 SAPEPHPE 300
OxoGdeHyase_C pfam16870
2-oxoglutarate dehydrogenase C-terminal; OxoGdeHyase_C is a family found immediately ...
880-1025 1.66e-80

2-oxoglutarate dehydrogenase C-terminal; OxoGdeHyase_C is a family found immediately C-terminal to Transket_pyr, pfam02779. It is found at the C-terminus of 2-oxoglutarate dehydrogenase.


Pssm-ID: 465289 [Multi-domain]  Cd Length: 147  Bit Score: 258.14  E-value: 1.66e-80
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  880 RSSFDEMLPGTHFQRVIPEDGPAaQNPENVKRLLFCTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKY 959
Cdd:pfam16870    1 RSSLEEFTPGTHFQRVIPDPEPL-VDPEKVKRVVLCSGKVYYDLLKEREERGGIKDVAIVRIEQLYPFPFDLLKEELDKY 79
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1391723613  960 PNA-ELAWCQEEHKNQGYYDYVKPRLRTTISRA-KPVWYAGRDPAAAPATGNKKTHLTELQRLLDTAF 1025
Cdd:pfam16870   80 PNAaEIVWCQEEPKNQGAWSFVQPRLETVLNETgHRLRYAGRPPSASPATGSKSVHLAEQEALLDDAF 147
Transket_pyr pfam02779
Transketolase, pyrimidine binding domain; This family includes transketolase enzymes, pyruvate ...
660-875 3.38e-53

Transketolase, pyrimidine binding domain; This family includes transketolase enzymes, pyruvate dehydrogenases, and branched chain alpha-keto acid decarboxylases.


Pssm-ID: 460692 [Multi-domain]  Cd Length: 174  Bit Score: 183.52  E-value: 3.38e-53
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  660 RTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDqnvdkrtcipmnhlwpnQAPYTVCNSSLSEYGVLGF 739
Cdd:pfam02779    1 KKIATRKASGEALAELAKRDPRVVGGGADLAGGTFTVTKGLLHP-----------------QGAGRVIDTGIAEQAMVGF 63
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  740 ELGFAMASPNaLVLWEAQFGDFHNtaqcIIDQFICPGQAKWVRQNG-IVLLLPHGMEGMGPEHSSARPERFLQMCNddpd 818
Cdd:pfam02779   64 ANGMALHGPL-LPPVEATFSDFLN----RADDAIRHGAALGKLPVPfVVTRDPIGVGEDGPTHQSVEDLAFLRAIP---- 134
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1391723613  819 vlpdlkeanfdinqlydcNWVVVNCSTPGNFFHVLRRQILLPFRKPLIIFTPKSLLR 875
Cdd:pfam02779  135 ------------------GLKVVRPSDAAETKGLLRAAIRRDGRKPVVLRLPRQLLR 173
Transket_pyr smart00861
Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer ...
728-875 4.24e-22

Transketolase, pyrimidine binding domain; Transketolase (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Hansenula polymorpha, there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates.


Pssm-ID: 214865 [Multi-domain]  Cd Length: 136  Bit Score: 92.93  E-value: 4.24e-22
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   728 NSSLSEYGVLGFELGFAMAspnALVLWEAQFGDFHNTAQCIIDQFICpgqakWVRQNGIVLLLPHGMEGM-GPEHSSARP 806
Cdd:smart00861   19 DTGIAEQAMVGFAAGLALH---GLRPVVEIFFTFFDRAKDQIRSAGA-----SGNVPVVFRHDGGGGVGEdGPTHHSIED 90
                            90       100       110       120       130       140       150
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613   807 E-RFLQMcnddpdvlpdlkeanfdinqlydCNWVVVNCSTPGNFFHVLRRQILLPfRKPLIIFTPKSLLR 875
Cdd:smart00861   91 EaLLRAI-----------------------PGLKVVAPSDPAEAKGLLRAAIRDD-GPVVIRLERKSLYR 136
2-oxogl_dehyd_N pfam16078
2-oxoglutarate dehydrogenase N-terminus; This domain is found at the N-terminus of ...
47-87 1.26e-15

2-oxoglutarate dehydrogenase N-terminus; This domain is found at the N-terminus of 2-oxoglutarate dehydrogenases.


Pssm-ID: 465008 [Multi-domain]  Cd Length: 41  Bit Score: 71.41  E-value: 1.26e-15
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1391723613   47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGA 87
Cdd:pfam16078    1 DSFLSGANAAYIEELYEQYLKDPSSVDPSWRAYFDNLDDGE 41
TPP_E1_PDC_ADC_BCADC cd02000
Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; ...
411-583 1.12e-11

Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).


Pssm-ID: 238958 [Multi-domain]  Cd Length: 293  Bit Score: 66.75  E-value: 1.12e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  411 GKKVMSILLHGDAAfAGQGIVYETFHLS---DLPsytthgTVHVVVNNQIGFTTdPRmARSSPYPTDVARVVNA--PIFH 485
Cdd:cd02000    124 GEDRVAVCFFGDGA-TNEGDFHEALNFAalwKLP------VIFVCENNGYAIST-PT-SRQTAGTSIADRAAAYgiPGIR 194
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391723613  486 VNSDDPEAVMYVCKVAAEW-RSTfHKDVVVDLVCYRRNGHNEMDEPMftqplMYK-----QIRKQKPVLQKYAELLVSQG 559
Cdd:cd02000    195 VDGNDVLAVYEAAKEAVERaRAG-GGPTLIEAVTYRLGGHSTSDDPS-----RYRtkeevEEWKKRDPILRLRKYLIEAG 268
                          170       180
                   ....*....|....*....|....
gi 1391723613  560 VVNQPEYEEEISKYDKICEEAFAR 583
Cdd:cd02000    269 ILTEEELAAIEAEVKAEVEEAVEF 292
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
57-112 1.83e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 42.57  E-value: 1.83e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1391723613   57 YVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQS 112
Cdd:PRK12270    10 LVEEMYQQYLADPNSVDPSWREFFADYGPGSTAAPTAAAAAAAAAASAPAAAPAAK 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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