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Conserved domains on  [gi|1388591272|ref|NP_001350122|]
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protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform 4 [Homo sapiens]

Protein Classification

protein-L-isoaspartate O-methyltransferase family protein( domain architecture ID 1000299)

protein-L-isoaspartate O-methyltransferase (PIMT) family protein catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues

Gene Ontology:  GO:0051998|GO:0036211

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PCMT super family cl30237
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
11-219 8.49e-29

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);


The actual alignment was detected with superfamily member pfam01135:

Pssm-ID: 395902 [Multi-domain]  Cd Length: 205  Bit Score: 107.45  E-value: 8.49e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  11 NDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHG-NIHLSAPCIYSEVMEALKLQPGLSFLNLGS 89
Cdd:pfam01135   3 NEALIENLKNYGVIKSDKVAEAMLAVDREEFVPESFKSYAYEDIPLSIGyGQTISAPHMHAMMLELLELKPGMRVLEIGS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  90 GTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLEsfiknsdsfdKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGV 169
Cdd:pfam01135  83 GSGYLTACFARMVGEVGRVVSIEHIPELVEIARRNLE----------KLGLENVIVVVGDGRQGWPEFAPYDAIHVGAAA 152

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1388591272 170 QKDHENYMKiLLKVGGILVMPIEDQ----LTQIMRTGQNTWESKNILAVSFAPL 219
Cdd:pfam01135 153 PEIPEALID-QLKEGGRLVIPVGPNgnqvLQQFDKRNDGSVVIKDLEGVRFVPL 205
 
Name Accession Description Interval E-value
PCMT pfam01135
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
11-219 8.49e-29

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);


Pssm-ID: 395902 [Multi-domain]  Cd Length: 205  Bit Score: 107.45  E-value: 8.49e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  11 NDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHG-NIHLSAPCIYSEVMEALKLQPGLSFLNLGS 89
Cdd:pfam01135   3 NEALIENLKNYGVIKSDKVAEAMLAVDREEFVPESFKSYAYEDIPLSIGyGQTISAPHMHAMMLELLELKPGMRVLEIGS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  90 GTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLEsfiknsdsfdKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGV 169
Cdd:pfam01135  83 GSGYLTACFARMVGEVGRVVSIEHIPELVEIARRNLE----------KLGLENVIVVVGDGRQGWPEFAPYDAIHVGAAA 152

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1388591272 170 QKDHENYMKiLLKVGGILVMPIEDQ----LTQIMRTGQNTWESKNILAVSFAPL 219
Cdd:pfam01135 153 PEIPEALID-QLKEGGRLVIPVGPNgnqvLQQFDKRNDGSVVIKDLEGVRFVPL 205
Pcm COG2518
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ...
 24-220 1.62e-22

Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442008 [Multi-domain]  Cd Length: 197  Bit Score: 90.92  E-value: 1.62e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  24 IRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGN-IHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGY----LSTMV 98
Cdd:COG2518     9 VTDPRVLDAMRAVPRELFVPEALRELAYADRALPIGHgQTISQPYIVARMLEALDLKPGDRVLEIGTGSGYqaavLARLA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  99 GLIlgpfginHGIELHSDVVEYAKEKLESF-IKNsdsfdkfefcePAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYM 177
Cdd:COG2518    89 GRV-------YSVERDPELAERARERLAALgYDN-----------VTVRVGDGALGWPEHAPFDRIIVTAAAPEVPEALL 150

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1388591272 178 KiLLKVGGILVMPIED----QLTQIMRTGqNTWESKNILAVSFAPLV 220
Cdd:COG2518   151 E-QLAPGGRLVAPVGEggvqRLVLITRTG-DGFERESLFEVRFVPLR 195
pimt TIGR00080
protein-L-isoaspartate(D-aspartate) O-methyltransferase; This is an all-kingdom (but not all ...
 6-220 1.71e-22

protein-L-isoaspartate(D-aspartate) O-methyltransferase; This is an all-kingdom (but not all species) full-length ortholog enzyme for repairing aging proteins. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. [Protein fate, Protein modification and repair]


Pssm-ID: 272896 [Multi-domain]  Cd Length: 215  Bit Score: 91.43  E-value: 1.71e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272   6 SAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHG-NIHLSAPCIYSEVMEALKLQPGLSF 84
Cdd:TIGR00080   2 DLESQKKALIDKLINEGYIKSKRVIDALLSVPREEFVPEHFKEYAYVDTPLEIGyGQTISAPHMVAMMTELLELKPGMKV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  85 LNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLesfiKNSDsfdkfefcepafvVGNCLQIASDSHQ----- 159
Cdd:TIGR00080  82 LEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRL----RKLG-------------LDNVIVIVGDGTQgwepl 144

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1388591272 160 --YDRIYCGAGVQKDHENYMKiLLKVGGILVMPIEDQLTQIMRTGQ--NTWESKNILAVSFAPLV 220
Cdd:TIGR00080 145 apYDRIYVTAAGPKIPEALID-QLKEGGILVMPVGEYLQVLKRAEKrgGEIIIKDVEPVAFVPLV 208
PRK13942 PRK13942
protein-L-isoaspartate O-methyltransferase; Provisional
 9-220 2.95e-17

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 184409  Cd Length: 212  Bit Score: 77.36  E-value: 2.95e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272   9 EDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKD--LAWKHGNIhLSAPCIYSEVMEALKLQPGLSFLN 86
Cdd:PRK13942    4 EEKRRVIEELIREGYIKSKKVIDALLKVPRHLFVPEYLEEYAYVDtpLEIGYGQT-ISAIHMVAIMCELLDLKEGMKVLE 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  87 LGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFiknsdSFDKFEfcepaFVVGNCLQIASDSHQYDRIYCG 166
Cdd:PRK13942   83 IGTGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKL-----GYDNVE-----VIVGDGTLGYEENAPYDRIYVT 152

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1388591272 167 AGVQKDHENYMKiLLKVGGILVMPIED---QLTQIMRTGQNTWEsKNILAVSFAPLV 220
Cdd:PRK13942  153 AAGPDIPKPLIE-QLKDGGIMVIPVGSysqELIRVEKDNGKIIK-KKLGEVAFVPLI 207
 
Name Accession Description Interval E-value
PCMT pfam01135
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
11-219 8.49e-29

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);


Pssm-ID: 395902 [Multi-domain]  Cd Length: 205  Bit Score: 107.45  E-value: 8.49e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  11 NDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHG-NIHLSAPCIYSEVMEALKLQPGLSFLNLGS 89
Cdd:pfam01135   3 NEALIENLKNYGVIKSDKVAEAMLAVDREEFVPESFKSYAYEDIPLSIGyGQTISAPHMHAMMLELLELKPGMRVLEIGS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  90 GTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLEsfiknsdsfdKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGV 169
Cdd:pfam01135  83 GSGYLTACFARMVGEVGRVVSIEHIPELVEIARRNLE----------KLGLENVIVVVGDGRQGWPEFAPYDAIHVGAAA 152

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1388591272 170 QKDHENYMKiLLKVGGILVMPIEDQ----LTQIMRTGQNTWESKNILAVSFAPL 219
Cdd:pfam01135 153 PEIPEALID-QLKEGGRLVIPVGPNgnqvLQQFDKRNDGSVVIKDLEGVRFVPL 205
Pcm COG2518
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ...
 24-220 1.62e-22

Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442008 [Multi-domain]  Cd Length: 197  Bit Score: 90.92  E-value: 1.62e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  24 IRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGN-IHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGY----LSTMV 98
Cdd:COG2518     9 VTDPRVLDAMRAVPRELFVPEALRELAYADRALPIGHgQTISQPYIVARMLEALDLKPGDRVLEIGTGSGYqaavLARLA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  99 GLIlgpfginHGIELHSDVVEYAKEKLESF-IKNsdsfdkfefcePAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYM 177
Cdd:COG2518    89 GRV-------YSVERDPELAERARERLAALgYDN-----------VTVRVGDGALGWPEHAPFDRIIVTAAAPEVPEALL 150

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1388591272 178 KiLLKVGGILVMPIED----QLTQIMRTGqNTWESKNILAVSFAPLV 220
Cdd:COG2518   151 E-QLAPGGRLVAPVGEggvqRLVLITRTG-DGFERESLFEVRFVPLR 195
pimt TIGR00080
protein-L-isoaspartate(D-aspartate) O-methyltransferase; This is an all-kingdom (but not all ...
 6-220 1.71e-22

protein-L-isoaspartate(D-aspartate) O-methyltransferase; This is an all-kingdom (but not all species) full-length ortholog enzyme for repairing aging proteins. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. [Protein fate, Protein modification and repair]


Pssm-ID: 272896 [Multi-domain]  Cd Length: 215  Bit Score: 91.43  E-value: 1.71e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272   6 SAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHG-NIHLSAPCIYSEVMEALKLQPGLSF 84
Cdd:TIGR00080   2 DLESQKKALIDKLINEGYIKSKRVIDALLSVPREEFVPEHFKEYAYVDTPLEIGyGQTISAPHMVAMMTELLELKPGMKV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  85 LNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLesfiKNSDsfdkfefcepafvVGNCLQIASDSHQ----- 159
Cdd:TIGR00080  82 LEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRL----RKLG-------------LDNVIVIVGDGTQgwepl 144

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1388591272 160 --YDRIYCGAGVQKDHENYMKiLLKVGGILVMPIEDQLTQIMRTGQ--NTWESKNILAVSFAPLV 220
Cdd:TIGR00080 145 apYDRIYVTAAGPKIPEALID-QLKEGGILVMPVGEYLQVLKRAEKrgGEIIIKDVEPVAFVPLV 208
PRK13942 PRK13942
protein-L-isoaspartate O-methyltransferase; Provisional
 9-220 2.95e-17

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 184409  Cd Length: 212  Bit Score: 77.36  E-value: 2.95e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272   9 EDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKD--LAWKHGNIhLSAPCIYSEVMEALKLQPGLSFLN 86
Cdd:PRK13942    4 EEKRRVIEELIREGYIKSKKVIDALLKVPRHLFVPEYLEEYAYVDtpLEIGYGQT-ISAIHMVAIMCELLDLKEGMKVLE 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  87 LGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFiknsdSFDKFEfcepaFVVGNCLQIASDSHQYDRIYCG 166
Cdd:PRK13942   83 IGTGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKL-----GYDNVE-----VIVGDGTLGYEENAPYDRIYVT 152

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1388591272 167 AGVQKDHENYMKiLLKVGGILVMPIED---QLTQIMRTGQNTWEsKNILAVSFAPLV 220
Cdd:PRK13942  153 AAGPDIPKPLIE-QLKDGGIMVIPVGSysqELIRVEKDNGKIIK-KKLGEVAFVPLI 207
pcm PRK00312
protein-L-isoaspartate(D-aspartate) O-methyltransferase;
14-221 3.90e-12

protein-L-isoaspartate(D-aspartate) O-methyltransferase;


Pssm-ID: 178974 [Multi-domain]  Cd Length: 212  Bit Score: 63.30  E-value: 3.90e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  14 LIDNLKeAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLA-------WkhgnihLSAPCIYSEVMEALKLQPGLSFLN 86
Cdd:PRK00312   12 LVLRLR-AEGILDERVLEAIEATPRELFVPEAFKHKAYENRAlpigcgqT------ISQPYMVARMTELLELKPGDRVLE 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  87 LGSGTGY----LSTMVGLILgpfginhGIELHSDVVEYAKEKLES------FIKNSDSFDKFefcePAFvvgnclqiASd 156
Cdd:PRK00312   85 IGTGSGYqaavLAHLVRRVF-------SVERIKTLQWEAKRRLKQlglhnvSVRHGDGWKGW----PAY--------AP- 144

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1388591272 157 shqYDRIYCGAGVQKDHENYMKiLLKVGGILVMPIEDQLTQIM----RTGQNtWESKNILAVSFAPLVQ 221
Cdd:PRK00312  145 ---FDRILVTAAAPEIPRALLE-QLKEGGILVAPVGGEEQQLLtrvrKRGGR-FEREVLEEVRFVPLVK 208
methyltran_FxLD TIGR04364
methyltransferase, FxLD system; Members of this family resemble occur regularly in the ...
 7-126 7.68e-11

methyltransferase, FxLD system; Members of this family resemble occur regularly in the vicinity of lantibiotic biosynthesis enzymes and their probable target, the FxLD family of putative ribosomal natural product precursor (TIGR04363). Members resemble protein-L-isoaspartate O-methyltransferase (TIGR00080) and a predicted methyltranserase, TIGR04188, of another putative peptide modification system.


Pssm-ID: 275158  Cd Length: 394  Bit Score: 61.23  E-value: 7.68e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272   7 AGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAY---KDLAWK---HGNI--HLSAPCIYSEVMEALKL 78
Cdd:TIGR04364   1 AARLRAALVDELREDGVIRSPRVEAAFRTVPRHLFAPGAPLEKAYaanRAVVTKrdeDGRAlsSVSAPHIQAMMLEQAGV 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1388591272  79 QPGLSFLNLGSGtGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLE 126
Cdd:TIGR04364  81 EPGMRVLEIGSG-GYNAALLAELVGPSGEVTTVDIDEDVTDRARACLA 127
PRK13944 PRK13944
protein-L-isoaspartate O-methyltransferase; Provisional
 14-219 1.35e-10

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 140001  Cd Length: 205  Bit Score: 59.06  E-value: 1.35e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  14 LIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKD--LAWKHGNIhLSAPCIYSEVMEALKLQPGLSFLNLGSGT 91
Cdd:PRK13944    5 LVEELVREGIIKSERVKKAMLSVPREEFVMPEYRMMAYEDrpLPLFAGAT-ISAPHMVAMMCELIEPRPGMKILEVGTGS 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  92 GYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESF-------IKNSDSFDKFEFCEPafvvgnclqiasdshqYDRIY 164
Cdd:PRK13944   84 GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLgywgvveVYHGDGKRGLEKHAP----------------FDAII 147

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1388591272 165 CGAGVQKDHENYMKiLLKVGGILVMPIEDQLTQIM----RTGQNTwESKNILAVSFAPL 219
Cdd:PRK13944  148 VTAAASTIPSALVR-QLKDGGVLVIPVEEGVGQVLykvvKRGEKV-EKRAITYVLFVPL 204
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 69-200 4.15e-07

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 48.07  E-value: 4.15e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  69 YSEVMEALKLQPGLSFLNLGSGTGYLStmvgLILGPFGIN-HGIELHSDVVEYAKEKLESFIKNSDsfdkfefcepaFVV 147
Cdd:COG2226    11 REALLAALGLRPGARVLDLGCGTGRLA----LALAERGARvTGVDISPEMLELARERAAEAGLNVE-----------FVV 75

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1388591272 148 GNCLQIASDSHQYDRIYCGAGVQ--KDHENYMKIL---LKVGGILVM-----PIEDQLTQIMR 200
Cdd:COG2226    76 GDAEDLPFPDGSFDLVISSFVLHhlPDPERALAEIarvLKPGGRLVVvdfspPDLAELEELLA 138
PRK13943 PRK13943
protein-L-isoaspartate O-methyltransferase; Provisional
 64-192 4.35e-06

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 237568 [Multi-domain]  Cd Length: 322  Bit Score: 46.76  E-value: 4.35e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  64 SAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESF-IKNSdsfdkfefce 142
Cdd:PRK13943   64 SQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLgIENV---------- 133

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1388591272 143 pAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKiLLKVGGILVMPIE 192
Cdd:PRK13943  134 -IFVCGDGYYGVPEFAPYDVIFVTVGVDEVPETWFT-QLKEGGRVIVPIN 181
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 78-189 5.65e-05

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 41.54  E-value: 5.65e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  78 LQPGLSFLNLGSGTGYLStmvgLILGPFGIN-HGIELHSDVVEYAKEKLESFiknsdsfdkfefcEPAFVVGNCLQIASD 156
Cdd:COG2227    22 LPAGGRVLDVGCGTGRLA----LALARRGADvTGVDISPEALEIARERAAEL-------------NVDFVQGDLEDLPLE 84

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1388591272 157 SHQYDRIYCGAGVQ--KDHENYMKIL---LKVGGILVM 189
Cdd:COG2227    85 DGSFDLVICSEVLEhlPDPAALLRELarlLKPGGLLLL 122
cbiT PRK00377
cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
 76-189 1.93e-03

cobalt-precorrin-6Y C(15)-methyltransferase; Provisional


Pssm-ID: 234740  Cd Length: 198  Bit Score: 38.24  E-value: 1.93e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  76 LKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFiknsDSFDKFEFCEpafvvGNCLQIAS 155
Cdd:PRK00377   36 LRLRKGDMILDIGCGTGSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKF----GVLNNIVLIK-----GEAPEILF 106

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1388591272 156 D-SHQYDRIYCGAGVQKDHENYMKI--LLKVGGILVM 189
Cdd:PRK00377  107 TiNEKFDRIFIGGGSEKLKEIISASweIIKKGGRIVI 143
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
68-165 7.08e-03

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 36.13  E-value: 7.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591272  68 IYSEVMEALKLQPGLSFLNLGSGTGYLstmvGLILGPFGIN-HGIELHSDVVEYAKEKlesfiknsdsfdkfeFCEPAFV 146
Cdd:COG4976    34 LAEELLARLPPGPFGRVLDLGCGTGLL----GEALRPRGYRlTGVDLSEEMLAKAREK---------------GVYDRLL 94

                          90
                  ....*....|....*....
gi 1388591272 147 VGNCLQIASDSHQYDRIYC 165
Cdd:COG4976    95 VADLADLAEPDGRFDLIVA 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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