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Conserved domains on  [gi|1270111412|ref|NP_001344311.1|]
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Y+L amino acid transporter 2 isoform 2 [Mus musculus]

Protein Classification

amino acid permease( domain architecture ID 1000062)

amino acid permease facilitates the transport of amino acids, similar to solute carrier family 7 (SLC7) members

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
2A0308 super family cl30119
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 1-293 3.59e-116

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00911:

Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 344.04  E-value: 3.59e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412   1 MGLVKLCQGHTEHF--QDAFKGSSWNVGDLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTN 78
Cdd:TIGR00911 208 TGWVQLGKGGVESLnpKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLTN 287

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  79 VAYYTVLNIQDVHKSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIERFTP 158
Cdd:TIGR00911 288 IAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLTP 367

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 159 VPALLFNCTMTLIYLVVKDVFLLINYFSFSYWFFVGLSVVGQLYLRWKEPDWPRPLKLSLFFPIVFCVCSLFLVAVPLFS 238
Cdd:TIGR00911 368 LPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLFLIILSLYS 447

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1270111412 239 DTINSLIGIGIALSGVPVYFLGVYLpeSRRPLFIRNVLATVTRVTQKLCFCVLTE 293
Cdd:TIGR00911 448 PPVGCGVGFIIMLTGVPVYFFGVWW--QNKPKWFRYLIVSKTVLLQKVLEVVKPQ 500
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 1-293 3.59e-116

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 344.04  E-value: 3.59e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412   1 MGLVKLCQGHTEHF--QDAFKGSSWNVGDLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTN 78
Cdd:TIGR00911 208 TGWVQLGKGGVESLnpKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLTN 287

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  79 VAYYTVLNIQDVHKSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIERFTP 158
Cdd:TIGR00911 288 IAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLTP 367

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 159 VPALLFNCTMTLIYLVVKDVFLLINYFSFSYWFFVGLSVVGQLYLRWKEPDWPRPLKLSLFFPIVFCVCSLFLVAVPLFS 238
Cdd:TIGR00911 368 LPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLFLIILSLYS 447

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1270111412 239 DTINSLIGIGIALSGVPVYFLGVYLpeSRRPLFIRNVLATVTRVTQKLCFCVLTE 293
Cdd:TIGR00911 448 PPVGCGVGFIIMLTGVPVYFFGVWW--QNKPKWFRYLIVSKTVLLQKVLEVVKPQ 500
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-259 1.27e-40

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 146.58  E-value: 1.27e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412   1 MGLVKLCQGHTEHFQdAFKGSSWNVGDLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVA 80
Cdd:COG0531   165 FIVVGLFAFDPANFT-PFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLA 243

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  81 YYTVLNIQDVHKSDAVAVTFADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIERFTPV 159
Cdd:COG0531   244 LTGVVPYDELAASGAPLADAAEAVFGpWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPV 323

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 160 PALLFNCTMTLIYLVV--KDVFLLINYFSFSYWFFVGLSVVGQLYLRWKEPDWPRPLKLSL-FFPIVFCVCSLFLVavpL 236
Cdd:COG0531   324 NAILLTGVIALLLLLLgaASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLpLIPILGILLCLFLL---Y 400

                         250       260
                  ....*....|....*....|...
gi 1270111412 237 FSDTINSLIGIGIALSGVPVYFL 259
Cdd:COG0531   401 LLGPGALLIGLVLLAIGLLLYLL 423
AA_permease_2 pfam13520
Amino acid permease;
2-237 2.40e-22

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 96.23  E-value: 2.40e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412   2 GLVKLCQGHT---EHFQDAFKGSSWNVGdlSLALYSALFSYSGWDTLNFVTEEIKNpeRNLPLAIGISMPIVTLIYILTN 78
Cdd:pfam13520 163 GLVTADGGGFnllSGEWHTFFPDGWPGV--FAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYILVN 238

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  79 VAYYTVLNIQDVHKSD---AVAVTFADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIE 154
Cdd:pfam13520 239 IAFFGVVPDDEIALSSglgQVAALLFQAVGGkWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSRFFAKVN 318

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 155 RF-TPVPALLFNCTMTLIYLVV-----KDVFLLINYFSFSYWFFVGLSVVGQLYLRWKEPDWPRPLKLSLfFPIVFCVCS 228
Cdd:pfam13520 319 KFgSPIRAIILTAILSLILLLLfllspAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWP-VAIFGILFS 397


                  ....*....
gi 1270111412 229 LFLVAVPLF 237
Cdd:pfam13520 398 LFLIVALFF 406
frlA PRK11357
amino acid permease;
20-258 4.17e-09

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 57.17  E-value: 4.17e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  20 GSSWNVGDLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIQDVHKSD---AV 96
Cdd:PRK11357  189 GATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSEtpiSD 268

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  97 AVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIERFTPVPALLFNCTMTLIYLVVK 176
Cdd:PRK11357  269 ALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVS 348

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 177 DVFLLINYFSFSYWFFVGLSVVGQLYLRWKEpDWpRPLKLSLFFP---IVFCVCSLFLVAVPLFSDTINSLI-GIGIALS 252
Cdd:PRK11357  349 DLTSLLGYFTLVMCFKNTLTFGSIIWCRKRD-DY-KPLWRTPAFGlmtTLAIASSLILVASTFVWAPIPGLIcAVIVIAT 426


                  ....*.
gi 1270111412 253 GVPVYF 258
Cdd:PRK11357  427 GLPAYA 432
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 1-293 3.59e-116

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 344.04  E-value: 3.59e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412   1 MGLVKLCQGHTEHF--QDAFKGSSWNVGDLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTN 78
Cdd:TIGR00911 208 TGWVQLGKGGVESLnpKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLTN 287

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  79 VAYYTVLNIQDVHKSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIERFTP 158
Cdd:TIGR00911 288 IAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLTP 367

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 159 VPALLFNCTMTLIYLVVKDVFLLINYFSFSYWFFVGLSVVGQLYLRWKEPDWPRPLKLSLFFPIVFCVCSLFLVAVPLFS 238
Cdd:TIGR00911 368 LPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLFLIILSLYS 447

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1270111412 239 DTINSLIGIGIALSGVPVYFLGVYLpeSRRPLFIRNVLATVTRVTQKLCFCVLTE 293
Cdd:TIGR00911 448 PPVGCGVGFIIMLTGVPVYFFGVWW--QNKPKWFRYLIVSKTVLLQKVLEVVKPQ 500
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-259 1.27e-40

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 146.58  E-value: 1.27e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412   1 MGLVKLCQGHTEHFQdAFKGSSWNVGDLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVA 80
Cdd:COG0531   165 FIVVGLFAFDPANFT-PFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLA 243

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  81 YYTVLNIQDVHKSDAVAVTFADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIERFTPV 159
Cdd:COG0531   244 LTGVVPYDELAASGAPLADAAEAVFGpWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPV 323

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 160 PALLFNCTMTLIYLVV--KDVFLLINYFSFSYWFFVGLSVVGQLYLRWKEPDWPRPLKLSL-FFPIVFCVCSLFLVavpL 236
Cdd:COG0531   324 NAILLTGVIALLLLLLgaASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLpLIPILGILLCLFLL---Y 400

                         250       260
                  ....*....|....*....|...
gi 1270111412 237 FSDTINSLIGIGIALSGVPVYFL 259
Cdd:COG0531   401 LLGPGALLIGLVLLAIGLLLYLL 423
AA_permease_2 pfam13520
Amino acid permease;
2-237 2.40e-22

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 96.23  E-value: 2.40e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412   2 GLVKLCQGHT---EHFQDAFKGSSWNVGdlSLALYSALFSYSGWDTLNFVTEEIKNpeRNLPLAIGISMPIVTLIYILTN 78
Cdd:pfam13520 163 GLVTADGGGFnllSGEWHTFFPDGWPGV--FAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYILVN 238

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  79 VAYYTVLNIQDVHKSD---AVAVTFADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIE 154
Cdd:pfam13520 239 IAFFGVVPDDEIALSSglgQVAALLFQAVGGkWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSRFFAKVN 318

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 155 RF-TPVPALLFNCTMTLIYLVV-----KDVFLLINYFSFSYWFFVGLSVVGQLYLRWKEPDWPRPLKLSLfFPIVFCVCS 228
Cdd:pfam13520 319 KFgSPIRAIILTAILSLILLLLfllspAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWP-VAIFGILFS 397


                  ....*....
gi 1270111412 229 LFLVAVPLF 237
Cdd:pfam13520 398 LFLIVALFF 406
frlA PRK11357
amino acid permease;
20-258 4.17e-09

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 57.17  E-value: 4.17e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  20 GSSWNVGDLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIQDVHKSD---AV 96
Cdd:PRK11357  189 GATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSEtpiSD 268

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  97 AVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIERFTPVPALLFNCTMTLIYLVVK 176
Cdd:PRK11357  269 ALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVS 348

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 177 DVFLLINYFSFSYWFFVGLSVVGQLYLRWKEpDWpRPLKLSLFFP---IVFCVCSLFLVAVPLFSDTINSLI-GIGIALS 252
Cdd:PRK11357  349 DLTSLLGYFTLVMCFKNTLTFGSIIWCRKRD-DY-KPLWRTPAFGlmtTLAIASSLILVASTFVWAPIPGLIcAVIVIAT 426


                  ....*.
gi 1270111412 253 GVPVYF 258
Cdd:PRK11357  427 GLPAYA 432
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 37-206 4.52e-08

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 54.05  E-value: 4.52e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  37 FSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIQDVHKSDAVAVTFAdqtfgMFSWTIP-IA 115
Cdd:TIGR00906 242 FAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFE-----YVGWDPAkYI 316

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 116 VALSCFGGLN----ASIFASSRLFFVGSREGHLPNLLSMIHIERFTPVPALLFNCTMTLIYLVVKDVFLLINYFSFSYWF 191
Cdd:TIGR00906 317 VAVGALCGMStsllGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLL 396

                         170
                  ....*....|....*
gi 1270111412 192 FVGLSVVGQLYLRWK 206
Cdd:TIGR00906 397 AYSLVAACVLILRYQ 411
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 35-259 9.47e-07

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 49.73  E-value: 9.47e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  35 ALFSYSGWDTLNFVTEEIKNPERNLPLAIGiSMPIVTLI-YILTNVAYYTVLNIQDV--HKSDAVAVtFADQTFGMFSWT 111
Cdd:PRK11049  220 AVFAFVGIELVGTTAAETKDPEKSLPRAIN-SIPIRIIMfYVFALIVIMSVTPWSSVvpDKSPFVEL-FVLVGLPAAASV 297

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 112 IPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHiERFTPVPALLFNCT-----MTLIYLV--VKDVFLLINY 184
Cdd:PRK11049  298 INFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLS-KRAVPAKGLTFSCIcllggVVLLYVNpsVIGAFTLVTT 376

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 185 FSFSYWFFV-GLSVVGQLYLRWKEPDWPRPLKLSLFFPIVFC-VCSLF----LVAVPLFSDTINSLIgigialsGVPVYF 258
Cdd:PRK11049  377 VSAILFMFVwTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCwVCMAFfafvLVLLTLEDDTRQALI-------VTPLWF 449


                  .
gi 1270111412 259 L 259
Cdd:PRK11049  450 I 450
PRK10249 PRK10249
phenylalanine transporter; Provisional
 17-205 1.85e-06

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 48.83  E-value: 1.85e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  17 AFKGSSWNVGDLSLALYsaLFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNV---AYYTVLNIQDvhKS 93
Cdd:PRK10249  202 GFFATGWNGLILSLAVI--MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVvllALYPWVEVKS--NS 277

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  94 DAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHiERFTPVPALLFNCTMTliyl 173
Cdd:PRK10249  278 SPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVS-RRGVPINSLMLSGAIT---- 352

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1270111412 174 vvkDVFLLINYFSFSYWFFVGLS-VVGQLYLRW 205
Cdd:PRK10249  353 ---SLVVLINYLLPQKAFGLLMAlVVATLLLNW 382
AA_permease pfam00324
Amino acid permease;
35-263 3.79e-06

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 48.09  E-value: 3.79e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  35 ALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIQDVHKSDAVAVTFADQTFGMFSWTIPI 114
Cdd:pfam00324 199 AFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYILSLLAIGLLVPWNDPGLLNDSASAASPFVIFFKFLGISG 278

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 115 AVAL-------SCFGGLNASIFASSRLFFVGSREGHLPNLLsMIHIERFTPVPALLFNCtmtLIYLvvkdVFLLINYFSF 187
Cdd:pfam00324 279 LAPLinaviltAALSAANSSLYSGSRMLYSLARDGLAPKFL-KKVDKRGVPLRAILVSM---VISL----LALLLASLNP 350

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 188 S--YWFFVGLSVVGQL---------YLRWK-----EPDWPRPLK-LSLFFPIVFCVCSLFLVAVPLFSDTINSLIGIGIA 250
Cdd:pfam00324 351 AivFNFLLAISGLSGLivwglislsHLRFRkafkyQGRSIDELPfKAPLGPLGVILGLAAIIIILIIQFLYAFLPVPGGP 430

                         250
                  ....*....|...
gi 1270111412 251 LSGVPVYFLGVYL 263
Cdd:pfam00324 431 KNWGAGSFAAAYL 443
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 32-242 1.63e-05

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 46.12  E-value: 1.63e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  32 LYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILT------NVAYY--TVLNIQDVHKSDAVAVTFADQ 103
Cdd:TIGR00913 203 FVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFYILTlfligfLVPYNdpRLLSSSSSSDSAASPFVIAIQ 282

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 104 TFGM--FSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHiERFTPVPALLFNCTMTLI-YLVVK---- 176
Cdd:TIGR00913 283 NHGIkvLPHIFNAVILISVLSAANSSLYASSRTLYALAHQGLAPKIFAYVD-RRGVPYVAVIVSSLFGLLaFLAVSkkea 361

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 177 DVF-LLIN---YFSFSYWFFVGLSvvgQLYLR--------------WKEPDWPRPLKLSLFFPIVFCVCSLFLVAVPLFS 238
Cdd:TIGR00913 362 EVFtWLLNisgLSGFFTWMCICLS---HIRFRkamkaqgrsldelpYKSQTGPYGSYYALFFNILILIAQGYVAFAPVKF 438


                  ....
gi 1270111412 239 DTIN 242
Cdd:TIGR00913 439 SAKS 442
PRK11021 PRK11021
putative transporter; Provisional
 21-184 5.69e-05

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 44.13  E-value: 5.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  21 SSWNVGDLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIQDVHKSDAVAVTF 100
Cdd:PRK11021  172 GSIEWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGDKQAAAASLPGI 251

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 101 ADQTFG-MFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHIERfTPVPAL---LFNC--TMTLIYLV 174
Cdd:PRK11021  252 FVQLFGgYALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARLSARG-VPVNALnavLGCCavSILLIYAL 330

                         170
                  ....*....|
gi 1270111412 175 VKDVFLLINY 184
Cdd:PRK11021  331 GLNLEALIAY 340
potE PRK10655
putrescine transporter; Provisional
 49-164 5.93e-05

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 44.25  E-value: 5.93e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  49 TEEIKNPERNLPLAIGISMPIVTLIYIL-TNVAYYTVLNIQDVHKSDAVAVTFADqtfgMFSWTIPIAVA----LSCFGG 123
Cdd:PRK10655  212 SDAVENPERNVPIAVLGGTLGAAVIYIVsTNVIAGIVPNMELANSTAPFGLAFAQ----MFNPTVGKIVMalmvMSCCGS 287

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1270111412 124 LNASIFASSRLFFVGSREGHLPNLLSMIhIERFTPVPALLF 164
Cdd:PRK10655  288 LLGWQFTIAQVFKSSADEGYFPKIFSRV-TKVDAPVQGMLI 327
PRK10238 PRK10238
aromatic amino acid transporter AroP;
36-263 1.25e-04

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 43.40  E-value: 1.25e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  36 LFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYILTNVAYYTVLNIQDV-HKSDAVAVTFADQTFGMFSWTIPI 114
Cdd:PRK10238  210 MFSFGGLELVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVtADTSPFVLIFHELGDTFVANALNI 289

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 115 AVALSCFGGLNASIFASSRLFFVGSREGHLPNLLSMIHiERFTPVPALLFNCTMTLI-----YLVVKDVFLLINYFSFSY 189
Cdd:PRK10238  290 VVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVD-KRGVPVNTILVSALVTALcvlinYLAPESAFGLLMALVVSA 368

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1270111412 190 ----WFFVGLSVVgqLYLRWKEPDWPRPLKLSLFFPIVFCVCSLFLVAVPLFsdtinSLIGIGIALSgvpVYFLGVYL 263
Cdd:PRK10238  369 lvinWAMISLAHM--KFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVI-----MLMTPGMAIS---VYLIPVWL 436
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 30-173 6.46e-04

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 41.27  E-value: 6.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  30 LALYSALFSYSGWDTLNFVTEEIKNPERNLPLAI--GISMPIVT-LIYILtnVAYYTVLNIQDVHKSDA---VAVTFADQ 103
Cdd:TIGR00907 221 LGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIigAVAIGIVTgFCFNI--VLFFSMGDIDSLISSTTgqpIAQIFYNA 298

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412 104 T--------FGMFSWTIPIAVALSCfgglnasIFASSRLFFVGSREGHLP--NLLSMIHIERFTPVPALLFNC----TMT 169
Cdd:TIGR00907 299 LgnkagaifLLCLILVTSFFCAITC-------MTANSRMIYAFSRDGGLPfsPLWSRVNPRTQVPLNAVWLSAvwiiLIG 371


                  ....
gi 1270111412 170 LIYL 173
Cdd:TIGR00907 372 LLGL 375
PRK15238 PRK15238
inner membrane transporter YjeM; Provisional
 28-91 9.64e-04

inner membrane transporter YjeM; Provisional


Pssm-ID: 237929 [Multi-domain]  Cd Length: 496  Bit Score: 40.69  E-value: 9.64e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1270111412  28 LSLALYsALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTLIYIL------TNVAYYTVLNIQDVH 91
Cdd:PRK15238  214 LSFVVF-AIFAYGGIEAVGGLVDKTENPEKNFPKGIIIAAIVISIGYSLaiflwgVSTNWQQVLSNKSVN 282
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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