|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
114-830 |
2.32e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 67.77 E-value: 2.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 114 KMNRYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKK 193
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 194 HLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQH 273
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAE 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 274 CKEDSERLMEqqgaLLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQ------AQ 347
Cdd:TIGR02168 435 LKELQAELEE----LEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEgfsegvKA 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 348 LRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEqlKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDL 427
Cdd:TIGR02168 511 LLKNQSGLSGILGVLSELISVDEGYEAAIEAALG--GRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQG 588
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 428 YVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVtdlvnqqqtleeKMREDRDSLVERLHRQTAEYSAFKLENERLK 507
Cdd:TIGR02168 589 NDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGV------------LVVDDLDNALELAKKLRPGYRIVTLDGDLVR 656
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 508 ASFApMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILK---DEMNKEIEAARRQF 584
Cdd:TIGR02168 657 PGGV-ITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRkelEELSRQISALRKDL 735
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 585 QSQLADLQQLPDILKITEAKLAECQDQLQGYERKnidltaiISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDEL 664
Cdd:TIGR02168 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEER-------LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDEL 808
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 665 ErlealgpisvlflgpetfshlavfclvcgsvEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEFLQVIAKREEAIHQS 744
Cdd:TIGR02168 809 R-------------------------------AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESL 857
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 745 QLRLEEKTRECGTLARQLESAiEDARRQVEQTKEHALSKERAAQNKILDLETQLSRTKTELSQLRRSRDDADRRYQS--- 821
Cdd:TIGR02168 858 AAEIEELEELIEELESELEAL-LNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGlev 936
|
....*....
gi 1191704921 822 RLQDLKDRL 830
Cdd:TIGR02168 937 RIDNLQERL 945
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
241-543 |
1.40e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.46 E-value: 1.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 241 INTLTRQKELLLQklstFEETNRTLRDL------LREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVE 314
Cdd:TIGR02168 202 LKSLERQAEKAER----YKELKAELRELelallvLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVS 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 315 ELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDK 394
Cdd:TIGR02168 278 ELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 395 ESLKKAIRAQKERAEKSEEYAEQLHvQLADKdlyVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTL 474
Cdd:TIGR02168 358 AELEELEAELEELESRLEELEEQLE-TLRSK---VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEA 433
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 475 E-EKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKS 543
Cdd:TIGR02168 434 ElKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG 503
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
162-667 |
2.75e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 64.27 E-value: 2.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 162 HELAETEHENTVLRHniERMKEEKDFTILQKKhlQQEKECLMSKLVEAEmdgaaaaKQVMALKDTIGKLKTEKQMTCTDI 241
Cdd:TIGR04523 180 KEKLNIQKNIDKIKN--KLLKLELLLSNLKKK--IQKNKSLESQISELK-------KQNNQLKDNIEKKQQEINEKTTEI 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 242 NTLTRQKELLLQklstfeETNRTLRDLLREQHCKEDSERLMEQqgaLLKRLAEADSE-KARLLLLLQDKDKEVEELLQEI 320
Cdd:TIGR04523 249 SNTQTQLNQLKD------EQNKIKKQLSEKQKELEQNNKKIKE---LEKQLNQLKSEiSDLNNQKEQDWNKELKSELKNQ 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 321 QCEKAQAKTasELSKSMESMrghlqaqlrskeaenSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKgdrdKESLKKA 400
Cdd:TIGR04523 320 EKKLEEIQN--QISQNNKII---------------SQLNEQISQLKKELTNSESENSEKQRELEEKQNE----IEKLKKE 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 401 IRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLE---EK 477
Cdd:TIGR04523 379 NQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKEliiKN 458
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 478 MREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAA 557
Cdd:TIGR04523 459 LDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKES 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 558 QLErcDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQG 637
Cdd:TIGR04523 539 KIS--DLEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLE 616
|
490 500 510
....*....|....*....|....*....|
gi 1191704921 638 DKLEMAREKHQASQKENKQLSLKVDELERL 667
Cdd:TIGR04523 617 KELEKAKKENEKLSSIIKNIKSKKNKLKQE 646
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
168-844 |
4.90e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.55 E-value: 4.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 168 EHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTC-TDINTLTR 246
Cdd:TIGR02169 222 EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVkEKIGELEA 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 247 QKELLLQKLstfEETNRTLRDLL-REQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKA 325
Cdd:TIGR02169 302 EIASLERSI---AEKERELEDAEeRLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDK 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 326 QAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKA----- 400
Cdd:TIGR02169 379 EFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQewkle 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 401 -IRAQKERAEKS----EEYAEQLHVQLADKDLYVAEALSTLESWRSR------------------YNQV-----VKEKGD 452
Cdd:TIGR02169 459 qLAADLSKYEQElydlKEEYDRVEKELSKLQRELAEAEAQARASEERvrggraveevlkasiqgvHGTVaqlgsVGERYA 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 453 LELEI--------IVLND-----------------RVTDL----VNQQQTLEEKMRED---------------------- 481
Cdd:TIGR02169 539 TAIEVaagnrlnnVVVEDdavakeaiellkrrkagRATFLplnkMRDERRDLSILSEDgvigfavdlvefdpkyepafky 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 482 --RDSLV----ERLHRQTAEYSAFKLENERLKAS-------FAPMEDKLNQAHL--EVQQLKASVKNYEGMIDNYKSQVM 546
Cdd:TIGR02169 619 vfGDTLVvediEAARRLMGKYRMVTLEGELFEKSgamtggsRAPRGGILFSRSEpaELQRLRERLEGLKRELSSLQSELR 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 547 KTRLEADEVAAQLERCdkenkilkdemNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAII 626
Cdd:TIGR02169 699 RIENRLDELSQELSDA-----------SRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARI 767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 627 SDLRSRIEHQGDKLE--MAREKHQASQKENKQLSLKVDELERLEAlgpisvlflgpetfshlavfclvcgSVEGLEALEG 704
Cdd:TIGR02169 768 EELEEDLHKLEEALNdlEARLSHSRIPEIQAELSKLEEEVSRIEA-------------------------RLREIEQKLN 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 705 TRQTSEEKLlpfQWKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTLA---RQLESAIEDARRQVEQTKEHAl 781
Cdd:TIGR02169 823 RLTLEKEYL---EKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEaalRDLESRLGDLKKERDELEAQL- 898
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1191704921 782 skeRAAQNKILDLETQLSRTKTELSQLrrsrddadrryQSRLQDLKDRLEQSESTNRSMQNYV 844
Cdd:TIGR02169 899 ---RELERKIEELEAQIEKKRKRLSEL-----------KAKLEALEEELSEIEDPKGEDEEIP 947
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
116-673 |
1.09e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.38 E-value: 1.09e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 116 NRYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHL 195
Cdd:TIGR02168 340 AELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERL 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 196 QQEKECLMSKLVEAEMDgaAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREqhCK 275
Cdd:TIGR02168 420 QQEIEELLKKLEEAELK--ELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDS--LE 495
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 276 EDSERLM-------------EQQGALLKRLAEA-------------------------DSEKARL--------------- 302
Cdd:TIGR02168 496 RLQENLEgfsegvkallknqSGLSGILGVLSELisvdegyeaaieaalggrlqavvveNLNAAKKaiaflkqnelgrvtf 575
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 303 ----LLLLQDKDKEVEELLQEIQCEKAQA----KTASELSKSMESMRGH------------LQAQLR------------- 349
Cdd:TIGR02168 576 lpldSIKGTEIQGNDREILKNIEGFLGVAkdlvKFDPKLRKALSYLLGGvlvvddldnaleLAKKLRpgyrivtldgdlv 655
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 350 ---------SKEAENSRLCMQ--IKNLERSGNQHKAEVEAIMEQLKELKQ----------KGDRDKESLKKAIRAQKERA 408
Cdd:TIGR02168 656 rpggvitggSAKTNSSILERRreIEELEEKIEELEEKIAELEKALAELRKeleeleeeleQLRKELEELSRQISALRKDL 735
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 409 EKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMredrDSLVER 488
Cdd:TIGR02168 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAL----DELRAE 811
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 489 LHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYksqvmktRLEADEVAAQLERCDKEnki 568
Cdd:TIGR02168 812 LTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEEL-------EELIEELESELEALLNE--- 881
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 569 lKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRI-EHQGDKLEMAREKH 647
Cdd:TIGR02168 882 -RASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLsEEYSLTLEEAEALE 960
|
650 660
....*....|....*....|....*..
gi 1191704921 648 QASQKENKQLSLKVDELER-LEALGPI 673
Cdd:TIGR02168 961 NKIEDDEEEARRRLKRLENkIKELGPV 987
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
247-655 |
1.27e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 62.06 E-value: 1.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 247 QKELLLQKLSTFEETNRTLRDLLRE-QHCKEDSERLMEQQGALLK-RLAEADSEKARLLLLLQDKDKEVEELL------- 317
Cdd:pfam15921 311 QNSMYMRQLSDLESTVSQLRSELREaKRMYEDKIEELEKQLVLANsELTEARTERDQFSQESGNLDDQLQKLLadlhkre 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 318 QEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERS-GNQHKAEVEAI------MEQLKELKQKG 390
Cdd:pfam15921 391 KELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcQGQMERQMAAIqgknesLEKVSSLTAQL 470
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 391 DRDKESLKKAIR---AQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYN------QVVKEKGD------LEL 455
Cdd:pfam15921 471 ESTKEMLRKVVEeltAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDlklqelQHLKNEGDhlrnvqTEC 550
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 456 EIIVLN---------------DRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQA 520
Cdd:pfam15921 551 EALKLQmaekdkvieilrqqiENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDL 630
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 521 HLE--------VQQLKAsVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQ 592
Cdd:pfam15921 631 ELEkvklvnagSERLRA-VKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE 709
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1191704921 593 QLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMA-REKHQASQKENK 655
Cdd:pfam15921 710 QTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNAnKEKHFLKEEKNK 773
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
156-850 |
1.55e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 1.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 156 ELEEVAHELAETEHEntvlRHNIERmkeekdftilQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQ 235
Cdd:TIGR02168 240 ELEELQEELKEAEEE----LEELTA----------ELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQ 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 236 MTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQhcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEE 315
Cdd:TIGR02168 306 ILRERLANLERQLEELEAQLEELESKLDELAEELAEL--EEKLEELKEELESLEAELEELEAELEELESRLEELEEQLET 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 316 LLQEI-QCEKAQAKTASELSKsmesmrghLQAQLRSKEAENSRLCMQIKNLERSgnQHKAEVEAIMEQLKELKQkGDRDK 394
Cdd:TIGR02168 384 LRSKVaQLELQIASLNNEIER--------LEARLERLEDRRERLQQEIEELLKK--LEEAELKELQAELEELEE-ELEEL 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 395 ESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRY-------NQVVKEKGDLELEIIVLNDRVTDL 467
Cdd:TIGR02168 453 QEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLegfsegvKALLKNQSGLSGILGVLSELISVD 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 468 VNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPM----EDKLNQAHLEVQQLKASVKNYEGMIDNYKS 543
Cdd:TIGR02168 533 EGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLdsikGTEIQGNDREILKNIEGFLGVAKDLVKFDP 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 544 Q---VMKTRL----------EADEVAAQLERcdKENKILKDE--------MNKEIEAARRQFQSQLADLQQLPDILKITE 602
Cdd:TIGR02168 613 KlrkALSYLLggvlvvddldNALELAKKLRP--GYRIVTLDGdlvrpggvITGGSAKTNSSILERRREIEELEEKIEELE 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 603 AKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDEL--ERLEALGPISVLFLGP 680
Cdd:TIGR02168 691 EKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLskELTELEAEIEELEERL 770
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 681 EtfshlavfclvcGSVEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTLAR 760
Cdd:TIGR02168 771 E------------EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATER 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 761 QlesaIEDARRQVEQTKEHALSKErAAQNKILDLETQLSRTKTELSQLRRSRDDADRRYQSRLQDLKDRLEQSESTNRSM 840
Cdd:TIGR02168 839 R----LEDLEEQIEELSEDIESLA-AEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSEL 913
|
730
....*....|
gi 1191704921 841 QNYVQFLKSS 850
Cdd:TIGR02168 914 RRELEELREK 923
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
189-670 |
3.23e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 3.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 189 ILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDL 268
Cdd:COG1196 231 LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEER 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 269 LREQhcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEI-QCEKAQAKTASELSKSMESMRGHLQAQ 347
Cdd:COG1196 311 RREL--EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELaEAEEALLEAEAELAEAEEELEELAEEL 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 348 LR------SKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQ 421
Cdd:COG1196 389 LEalraaaELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAEL 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 422 LADKDLY---VAEALSTLESWRSRYN----------------QVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDR 482
Cdd:COG1196 469 LEEAALLeaaLAELLEELAEAAARLLllleaeadyegflegvKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAAL 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 483 DSLVERLHRQTAEYSAFKLENERLKASFAPMeDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERC 562
Cdd:COG1196 549 QNIVVEDDEVAAAAIEYLKAAKAGRATFLPL-DKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 563 DKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAEcqdQLQgyERKNIDLTAIISDLRSRIEHQGDKLEM 642
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA---ALL--EAEAELEELAERLAEEELELEEALLAE 702
|
490 500
....*....|....*....|....*...
gi 1191704921 643 AREKHQASQKENKQLSLKVDELERLEAL 670
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQL 730
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
216-665 |
2.61e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 57.74 E-value: 2.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 216 AAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETnrtlrdLLREQHCKEDSERLMEQQGALLKRLAEA 295
Cdd:PRK02224 197 EEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEV------LEEHEERREELETLEAEIEDLRETIAET 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 296 DSEKARLLLLLQDKDKEVEELLQEIQ-------CEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERS 368
Cdd:PRK02224 271 EREREELAEEVRDLRERLEELEEERDdllaeagLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLRED 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 369 GNQHKAEVEAIMEQLKELkqkgDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVK 448
Cdd:PRK02224 351 ADDLEERAEELREEAAEL----ESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 449 EKGDLELEIIVLNDRVTDlvNQQ-----------QTLEEKMR----EDRDSLVERLhrqTAEYSAFKLENERLKASFAPM 513
Cdd:PRK02224 427 REAELEATLRTARERVEE--AEAlleagkcpecgQPVEGSPHvetiEEDRERVEEL---EAELEDLEEEVEEVEERLERA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 514 EDkLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNK---EIEAARRQ---FQSQ 587
Cdd:PRK02224 502 ED-LVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEaeeEAEEAREEvaeLNSK 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 588 LADLQQLPDIL-KITE--AKLAECQDQLQGYERKNIDLTAI-------ISDLRSRI-----EHQGDKLEMAREKHQASQK 652
Cdd:PRK02224 581 LAELKERIESLeRIRTllAAIADAEDEIERLREKREALAELnderrerLAEKRERKreleaEFDEARIEEAREDKERAEE 660
|
490
....*....|...
gi 1191704921 653 ENKQLSLKVDELE 665
Cdd:PRK02224 661 YLEQVEEKLDELR 673
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
521-835 |
1.20e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.71 E-value: 1.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 521 HLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILK---DEMNKEIEAARRQFQSQLADLQQLPDI 597
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRlelEELELELEEAQAEEYELLAELARLEQD 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 598 LKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDELERLEAlgpisvlf 677
Cdd:COG1196 304 IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA-------- 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 678 lgpetfshlavfclvcgsvEGLEALEGTRQTSEEkllpfqwkLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGT 757
Cdd:COG1196 376 -------------------EAEEELEELAEELLE--------ALRAAAELAAQLEELEEAEEALLERLERLEEELEELEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 758 LARQLESAIEDARRQVEQTKEHAL---SKERAAQNKILDLETQLSRTKTELSQLRRSRDDADRRYQSRLQDLKDRLEQSE 834
Cdd:COG1196 429 ALAELEEEEEEEEEALEEAAEEEAeleEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
.
gi 1191704921 835 S 835
Cdd:COG1196 509 G 509
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
281-848 |
2.71e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 54.46 E-value: 2.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 281 LMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTA-----SELSKSMESMRGHLQAQLRSKEAEN 355
Cdd:pfam12128 267 YKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAvakdrSELEALEDQHGAFLDADIETAAADQ 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 356 SRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADkdlyvaeALST 435
Cdd:pfam12128 347 EQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAED-------DLQA 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 436 LES-WRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQ-TLEEKMR-EDRDSLVER----LHRQTAEYSAFKLENERLKA 508
Cdd:pfam12128 420 LESeLREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATaTPELLLQlENFDERIERareeQEAANAEVERLQSELRQARK 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 509 SFAPMEDKLNQAHLEVQQLKASVKNYEGMID----------NYKSQVMKTRLEADEVAAQLERCDkenkiLKDEMNKEIE 578
Cdd:pfam12128 500 RRDQASEALRQASRRLEERQSALDELELQLFpqagtllhflRKEAPDWEQSIGKVISPELLHRTD-----LDPEVWDGSV 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 579 AARRQFQSQLADLQQL--PDILKITEA---KLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAR--------- 644
Cdd:pfam12128 575 GGELNLYGVKLDLKRIdvPEWAASEEElreRLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARtalknarld 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 645 ------EKHQASQKENKQLS----LKVDELERLEAlgPISVLFLGPETFshlavfclvcgsvegLEALEGT-RQTSEEKL 713
Cdd:pfam12128 655 lrrlfdEKQSEKDKKNKALAerkdSANERLNSLEA--QLKQLDKKHQAW---------------LEEQKEQkREARTEKQ 717
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 714 LPFQWKLEATSAQNIEFLQVIAKREEAI--HQSQLRLEEKT----------------RECGTLARQLESAiedARRQVEQ 775
Cdd:pfam12128 718 AYWQVVEGALDAQLALLKAAIAARRSGAkaELKALETWYKRdlaslgvdpdviaklkREIRTLERKIERI---AVRRQEV 794
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 776 TKEHALSKERAAQNKiLDLETQLSRTKTELSQLRRSRDDADRRYQSRLQ----------DLKDRLEQSESTNRSMQNYVQ 845
Cdd:pfam12128 795 LRYFDWYQETWLQRR-PRLATQLSNIERAISELQQQLARLIADTKLRRAklemerkaseKQQVRLSENLRGLRCEMSKLA 873
|
...
gi 1191704921 846 FLK 848
Cdd:pfam12128 874 TLK 876
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
289-666 |
3.10e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.76 E-value: 3.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 289 LKRLAEADSEKARLLLLLQDKDKEVEEL---------LQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLC 359
Cdd:PTZ00121 1396 AKKKAEEDKKKADELKKAAAAKKKADEAkkkaeekkkADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEA 1475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 360 MQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDK--ESLKKAIRAQK-ERAEKSEEYAEQLHVQLADkDLYVAEALSTL 436
Cdd:PTZ00121 1476 KKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKkaDEAKKAEEAKKaDEAKKAEEAKKADEAKKAE-EKKKADELKKA 1554
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 437 ESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQqqtLEEKMREDRDSLVERLHRQTAEySAFKLENERLKASFAPMEDk 516
Cdd:PTZ00121 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKK---AEEARIEEVMKLYEEEKKMKAE-EAKKAEEAKIKAEELKKAE- 1629
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 517 lnqahlEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLAdlqqlpd 596
Cdd:PTZ00121 1630 ------EEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK------- 1696
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 597 ilKITEAKLAECQDQLQGYERKNIDltaiisDLRSRIEHQGDKLEMAREKHQASQKENKQlsLKVDELER 666
Cdd:PTZ00121 1697 --EAEEAKKAEELKKKEAEEKKKAE------ELKKAEEENKIKAEEAKKEAEEDKKKAEE--AKKDEEEK 1756
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
164-656 |
4.12e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 53.96 E-value: 4.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 164 LAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINT 243
Cdd:pfam05483 263 LEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNK 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 244 LTRQKELLLqklSTFEETNRTLRDLLR-EQHCKEDSErlmEQQGALLKRLAEADSEKARLLLLLQDKDKEVEEL---LQE 319
Cdd:pfam05483 343 AKAAHSFVV---TEFEATTCSLEELLRtEQQRLEKNE---DQLKIITMELQKKSSELEEMTKFKNNKEVELEELkkiLAE 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 320 IQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQL---------------- 383
Cdd:pfam05483 417 DEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELekeklknieltahcdk 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 384 -----KELKQKGDRDKESLKKA------IRAQKERAEKSEEYAEQLHVQLADKDLYVAEAL-STLESWRSRYNQVVKEKG 451
Cdd:pfam05483 497 lllenKELTQEASDMTLELKKHqediinCKKQEERMLKQIENLEEKEMNLRDELESVREEFiQKGDEVKCKLDKSEENAR 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 452 DLELEIIVLNDRVTDLVNQQQTLEEKMrEDRDSLVERLHRqtaEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKasv 531
Cdd:pfam05483 577 SIEYEVLKKEKQMKILENKCNNLKKQI-ENKNKNIEELHQ---ENKALKKKGSAENKQLNAYEIKVNKLELELASAK--- 649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 532 KNYEGMIDNYKSQVMKTRLEADEVAAQLERCdkenKILKDEMNKEIEAARRQFQSQLADL--------QQLPDILKITEA 603
Cdd:pfam05483 650 QKFEEIIDNYQKEIEDKKISEEKLLEEVEKA----KAIADEAVKLQKEIDKRCQHKIAEMvalmekhkHQYDKIIEERDS 725
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1191704921 604 KLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQ 656
Cdd:pfam05483 726 ELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
272-851 |
2.12e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.59 E-value: 2.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 272 QHCKEDSERLMEQQgallKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRS- 350
Cdd:TIGR00606 412 QLCADLQSKERLKQ----EQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAEREl 487
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 351 KEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEE-------YAEQLHVQLA 423
Cdd:TIGR00606 488 SKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQirkiksrHSDELTSLLG 567
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 424 DKDlYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLEN 503
Cdd:TIGR00606 568 YFP-NKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKE 646
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 504 ERLKAS--FAPMEDKLNQAHLEVQQLKASVKNYEGMIDnyksQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAAR 581
Cdd:TIGR00606 647 EIEKSSkqRAMLAGATAVYSQFITQLTDENQSCCPVCQ----RVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKE 722
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 582 RQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMArEKHQASQKENKQLSLKV 661
Cdd:TIGR00606 723 KRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESA-KVCLTDVTIMERFQMEL 801
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 662 DELERlealgpisvlflgpetfsHLAVFCLVCGSVEGLEALEGTRQTSEEKllpfQWKLEATSAQNIEFLQVIAKREEAI 741
Cdd:TIGR00606 802 KDVER------------------KIAQQAAKLQGSDLDRTVQQVNQEKQEK----QHELDTVVSKIELNRKLIQDQQEQI 859
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 742 HQsqlrLEEKTRECGTLARQLESAIEDARRQVEQTKEhaLSKE--------RAAQNKILDLETQLSRTKTELSQLRRSRD 813
Cdd:TIGR00606 860 QH----LKSKTNELKSEKLQIGTNLQRRQQFEEQLVE--LSTEvqslireiKDAKEQDSPLETFLEKDQQEKEELISSKE 933
|
570 580 590
....*....|....*....|....*....|....*...
gi 1191704921 814 DADRRYQSRLQDLKDRLEQSESTNRSMQNYVQFLKSSY 851
Cdd:TIGR00606 934 TSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDY 971
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
240-670 |
4.31e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.54 E-value: 4.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 240 DINTLTRQKELLLQKLSTFEETNRTLRDLLREQHCKEDSERLMEQqgalLKRLAEADSEKARLLLLLQDKDKEVEELLQE 319
Cdd:COG4717 79 ELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEK----LLQLLPLYQELEALEAELAELPERLEELEER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 320 IQCEKAQAKTASELSKSMESMRGHLQAQLR----SKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRdke 395
Cdd:COG4717 155 LEELRELEEELEELEAELAELQEELEELLEqlslATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ--- 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 396 slkkaIRAQKERAEKSEEYAEQLHVQLAdkdlyVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLE 475
Cdd:COG4717 232 -----LENELEAAALEERLKEARLLLLI-----AAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLG 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 476 EKMREDRDSLVERlhrqtaeysafKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYegmidnyksQVMKTRLEADEV 555
Cdd:COG4717 302 KEAEELQALPALE-----------ELEEEELEELLAALGLPPDLSPEELLELLDRIEEL---------QELLREAEELEE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 556 AAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLpdilkitEAKLAECQDQLQGYERKNIDLTAIIS--DLRSRI 633
Cdd:COG4717 362 ELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQEL-------KEELEELEEQLEELLGELEELLEALDeeELEEEL 434
|
410 420 430
....*....|....*....|....*....|....*..
gi 1191704921 634 EHQGDKLEMAREKHQASQKENKQLSLKVDELERLEAL 670
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEEDGEL 471
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
117-673 |
4.48e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 50.71 E-value: 4.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 117 RYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQ 196
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 197 QEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQmtcTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQH-CK 275
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEAELA---EAEEALLEAEAELAEAEEELEELAEELLEALRAAAeLA 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 276 EDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAEN 355
Cdd:COG1196 400 AQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAAL 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 356 SRLcmqiknlersgnqhkAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEqLHVQLADKDLYVAEALST 435
Cdd:COG1196 480 AEL---------------LEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGA-VAVLIGVEAAYEAALEAA 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 436 LESWRSryNQVVKEKGDLELEIIVLND----RVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFA 511
Cdd:COG1196 544 LAAALQ--NIVVEDDEVAAAAIEYLKAakagRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDT 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 512 PMEDKLNQAHLEVQQLKASVKNYEGMIdnyksqvmkTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADL 591
Cdd:COG1196 622 LLGRTLVAARLEAALRRAVTLAGRLRE---------VTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEE 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 592 QQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDELE------ 665
Cdd:COG1196 693 LELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELErelerl 772
|
570
....*....|
gi 1191704921 666 --RLEALGPI 673
Cdd:COG1196 773 erEIEALGPV 782
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
214-780 |
5.71e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 50.35 E-value: 5.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 214 AAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQhckEDSERLMEQQGALLKRLA 293
Cdd:TIGR00618 296 AAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQE---IHIRDAHEVATSIREISC 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 294 EADSEKARLLLLLQDK--DKEVEELL-QEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQ---IKNLER 367
Cdd:TIGR00618 373 QQHTLTQHIHTLQQQKttLTQKLQSLcKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCaaaITCTAQ 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 368 SGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQ--------LHVQLADKDLYVAEALStlesw 439
Cdd:TIGR00618 453 CEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEpcplcgscIHPNPARQDIDNPGPLT----- 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 440 rSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDS---LVERLHRQTAEYSAFKLENERLKaSFAPMEDK 516
Cdd:TIGR00618 528 -RRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSfsiLTQCDNRSKEDIPNLQNITVRLQ-DLTEKLSE 605
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 517 L-------NQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRqfQSQLA 589
Cdd:TIGR00618 606 AedmlaceQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASR--QLALQ 683
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 590 DLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQL---SLKVDELER 666
Cdd:TIGR00618 684 KMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQartVLKARTEAH 763
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 667 LEALGPISVLFLGPETFSHLAvfclvcGSVEGLEALEGTRQTsEEKLLPFQWKLEATSAQNIEFLQV--IAKREEAIHQs 744
Cdd:TIGR00618 764 FNNNEEVTAALQTGAELSHLA------AEIQFFNRLREEDTH-LLKTLEAEIGQEIPSDEDILNLQCetLVQEEEQFLS- 835
|
570 580 590
....*....|....*....|....*....|....*.
gi 1191704921 745 qlRLEEKTRECGTLARQLESAIEDARRQVEQTKEHA 780
Cdd:TIGR00618 836 --RLEEKSATLGEITHQLLKYEECSKQLAQLTQEQA 869
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
163-634 |
8.19e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.55 E-value: 8.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 163 ELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDIN 242
Cdd:COG1196 324 ELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 243 TLTRQKELLLQKLSTFEETNRTLRDLLREQhcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQC 322
Cdd:COG1196 404 ELEEAEEALLERLERLEEELEELEEALAEL--EEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 323 EKAQAKTASELSKSMESMRGHLQAQLRS-----KEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLkeLKQKGDRDKESL 397
Cdd:COG1196 482 LLEELAEAAARLLLLLEAEADYEGFLEGvkaalLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAA--LQNIVVEDDEVA 559
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 398 KKAIRAQKERAEKSEeyAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVnqqQTLEEK 477
Cdd:COG1196 560 AAAIEYLKAAKAGRA--TFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV---AARLEA 634
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 478 MREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAA 557
Cdd:COG1196 635 ALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 558 QLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERK-----NIDLTAI------- 625
Cdd:COG1196 715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREiealgPVNLLAIeeyeele 794
|
490 500
....*....|....*....|....*
gi 1191704921 626 ----------------ISDLRSRIE 634
Cdd:COG1196 795 erydflseqredleeaRETLEEAIE 819
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
555-803 |
8.23e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 8.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 555 VAAQLERCDKENKIlkDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIE 634
Cdd:COG4942 16 AAQADAAAEAEAEL--EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 635 HQgdklemarEKHQASQKEnkQLSLKVDELERLEALGPISVLfLGPETFSHLAVfclvcgSVEGLEALEGTRQTSEEKLL 714
Cdd:COG4942 94 EL--------RAELEAQKE--ELAELLRALYRLGRQPPLALL-LSPEDFLDAVR------RLQYLKYLAPARREQAEELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 715 PFQWKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTLARQLESAIEDARRQVEQTKEHALSKERAAQNKILDL 794
Cdd:COG4942 157 ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
....*....
gi 1191704921 795 ETQLSRTKT 803
Cdd:COG4942 237 AAAAERTPA 245
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
179-841 |
1.07e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.35 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 179 ERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTF 258
Cdd:pfam15921 92 RRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQ 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 259 EETNRTLRdLLREQHCKEDSERLMEQQGALLKRLAEADSekaRLLLLLQDKDKEVEELLQEIQCEkaqaktASELSKSME 338
Cdd:pfam15921 172 IEQLRKMM-LSHEGVLQEIRSILVDFEEASGKKIYEHDS---MSTMHFRSLGSAISKILRELDTE------ISYLKGRIF 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 339 SMRGHLQAqLRSKEAENSRLCMQIKN--LERSGNQHKAEVEAIMEQLKELKQKGDrdkeslkkAIRAQKERAEKSEEYAE 416
Cdd:pfam15921 242 PVEDQLEA-LKSESQNKIELLLQQHQdrIEQLISEHEVEITGLTEKASSARSQAN--------SIQSQLEIIQEQARNQN 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 417 QLHV-QLADKDLYVAEALSTLESWRSRYNQVVKEkgdLELEIIVLNDRVTDLVNQQQTLEEK---MREDRDSLVERLHRQ 492
Cdd:pfam15921 313 SMYMrQLSDLESTVSQLRSELREAKRMYEDKIEE---LEKQLVLANSELTEARTERDQFSQEsgnLDDQLQKLLADLHKR 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 493 TAEYSAFKLENERL-------KASFAPMEDKLNQAHLEVQQLKASVKnyegmidnyksqVMKTRLEAdEVAAQLERCDKE 565
Cdd:pfam15921 390 EKELSLEKEQNKRLwdrdtgnSITIDHLRRELDDRNMEVQRLEALLK------------AMKSECQG-QMERQMAAIQGK 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 566 NKILK--DEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEhqgdkLEMA 643
Cdd:pfam15921 457 NESLEkvSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVD-----LKLQ 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 644 REKHQASQKENKQLSLKVDELERLEALGPISVLFLGPETFSHLAVFCLVCGSVEGLEALEGTRQTSE--EKLLPFQwkle 721
Cdd:pfam15921 532 ELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEinDRRLELQ---- 607
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 722 atsaqniEFLQVIAKREEAIHQSQLRLEEKTRECGTLARQLESAIEdARRQVEQTKEHALSKERAAQNKILDLETQLSRT 801
Cdd:pfam15921 608 -------EFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLR-AVKDIKQERDQLLNEVKTSRNELNSLSEDYEVL 679
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 1191704921 802 KTELSQLRRSRDDADRRYQSRLQDLKDRLEQSESTNRSMQ 841
Cdd:pfam15921 680 KRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSME 719
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
258-775 |
1.72e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.76 E-value: 1.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 258 FEETNRTLRDLLREQHCKEDSERLMEQQGALLK---RLAEADSEKA-----RLLLLLQDKDKEVEELLQEIQCEKAQAKT 329
Cdd:COG4913 234 FDDLERAHEALEDAREQIELLEPIRELAERYAAareRLAELEYLRAalrlwFAQRRLELLEAELEELRAELARLEAELER 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 330 ASELSKSMESMRGHLQAQLRSKEAEN-SRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERA 408
Cdd:COG4913 314 LEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 409 EKSEEYAEQLHVQLAD---------KDLYVAEA-LSTLESWRSRYNQV---------------------------VKEK- 450
Cdd:COG4913 394 EALEEELEALEEALAEaeaalrdlrRELRELEAeIASLERRKSNIPARllalrdalaealgldeaelpfvgelieVRPEe 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 451 -----------GDLELEIIV-----------LNDR------VTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFkLE 502
Cdd:COG4913 474 erwrgaiervlGGFALTLLVppehyaaalrwVNRLhlrgrlVYERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAW-LE 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 503 NErLKASFAPM----EDKLNQAHLEVQQlkasvknyEGMI-DNYKSQVMKTRLEADEV-------AAQLERCDKENKILK 570
Cdd:COG4913 553 AE-LGRRFDYVcvdsPEELRRHPRAITR--------AGQVkGNGTRHEKDDRRRIRSRyvlgfdnRAKLAALEAELAELE 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 571 DEMN------KEIEAARRQFQSQLADLQQLPDI------LKITEAKLAECQDQLQGYERKNIDLTAI---ISDLRSRIEH 635
Cdd:COG4913 624 EELAeaeerlEALEAELDALQERREALQRLAEYswdeidVASAEREIAELEAELERLDASSDDLAALeeqLEELEAELEE 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 636 QGDKLEMAREKHQASQKENKQLSLKVDE----LERLEALGPISVLFLGPETFSHLAVFCLVCGSVEGLE----ALEGTRQ 707
Cdd:COG4913 704 LEEELDELKGEIGRLEKELEQAEEELDElqdrLEAAEDLARLELRALLEERFAAALGDAVERELRENLEeridALRARLN 783
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 708 TSEEKLLP------FQWKLE-----ATSAQNIEFLQVIAK-REEAIHQ-----SQLRLEEKTRECGTLARQLESAIEDAR 770
Cdd:COG4913 784 RAEEELERamrafnREWPAEtadldADLESLPEYLALLDRlEEDGLPEyeerfKELLNENSIEFVADLLSKLRRAIREIK 863
|
....*
gi 1191704921 771 RQVEQ 775
Cdd:COG4913 864 ERIDP 868
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
307-520 |
4.03e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 4.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 307 QDKDKEVEELLQEIQcekAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKEL 386
Cdd:COG4942 19 ADAAAEAEAELEQLQ---QEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 387 KQKGDRDKESLKKAIRAQKERAEKSE-------EYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIV 459
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPlalllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1191704921 460 LNDRVTDLVNQQQTLEEKMREdRDSLVERLHRQTAEYSAfklENERLKASFAPMEDKLNQA 520
Cdd:COG4942 176 LEALLAELEEERAALEALKAE-RQKLLARLEKELAELAA---ELAELQQEAEELEALIARL 232
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
126-622 |
4.55e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.42 E-value: 4.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 126 MNAVGCLKSEVKMQKGERQMAKRFLEERkeeleevaheLAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSK 205
Cdd:pfam15921 316 MRQLSDLESTVSQLRSELREAKRMYEDK----------IEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLAD 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 206 LVEAEMDGAAAAKQVMALKD-------TIGKLKTEkqmtCTDINTLTRQKELLLQKLSTfeetnrtlrdllreqHCKEDS 278
Cdd:pfam15921 386 LHKREKELSLEKEQNKRLWDrdtgnsiTIDHLRRE----LDDRNMEVQRLEALLKAMKS---------------ECQGQM 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 279 ERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRL 358
Cdd:pfam15921 447 ERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRV 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 359 CMQIKNLERSGNQ--HKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYA-------EQLHVQLADKDLYV 429
Cdd:pfam15921 527 DLKLQELQHLKNEgdHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAgamqvekAQLEKEINDRRLEL 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 430 AEALSTLESWRSRYNQVVKEKGDLELEIIVL----NDRVTDLVNQQQTLEEKMREDRDSLVErLHRQTAEYSA----FKL 501
Cdd:pfam15921 607 QEFKILKDKKDAKIRELEARVSDLELEKVKLvnagSERLRAVKDIKQERDQLLNEVKTSRNE-LNSLSEDYEVlkrnFRN 685
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 502 ENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEG-------MIDNYKSQVMKTRLEADEVAAQLE-------RCDKENK 567
Cdd:pfam15921 686 KSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGsdghamkVAMGMQKQITAKRGQIDALQSKIQfleeamtNANKEKH 765
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1191704921 568 ILKDEMNK-----------------EIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDL 622
Cdd:pfam15921 766 FLKEEKNKlsqelstvateknkmagELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRL 837
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
276-790 |
4.76e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 4.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 276 EDSERLMEQQGALLKRLAEaDSEKARLLLLLQDKDKEVEELLQEIQCEKAQ-AKTASELSKSMESMRGHLQAQLRSKEAE 354
Cdd:PTZ00121 1197 EDARKAEAARKAEEERKAE-EARKAEDAKKAEAVKKAEEAKKDAEEAKKAEeERNNEEIRKFEEARMAHFARRQAAIKAE 1275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 355 NSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGD--RDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEA 432
Cdd:PTZ00121 1276 EARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEeaKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAA 1355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 433 LSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDlVNQQQTLEEKMREDRDSLVERLHRQTAEYSA----------FKLE 502
Cdd:PTZ00121 1356 ADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEE-KKKADEAKKKAEEDKKKADELKKAAAAKKKAdeakkkaeekKKAD 1434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 503 NERLKASFAPMEDKLNQAHLEVQQLKASVKNYEgmiDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARR 582
Cdd:PTZ00121 1435 EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAE---EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKK 1511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 583 QFQSQLADLQQLPDILKITEAKlAECQDQLQGYERKNIDLTAIISDLRsriehQGDKLEMAREKHQASQKENKQLSlKVD 662
Cdd:PTZ00121 1512 ADEAKKAEEAKKADEAKKAEEA-KKADEAKKAEEKKKADELKKAEELK-----KAEEKKKAEEAKKAEEDKNMALR-KAE 1584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 663 ELERLEALGPISVLFLGPETFSHLAVFcLVCGSVEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEFLQviaKREEAIH 742
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYEEEKKMKAEE-AKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELK---KAEEENK 1660
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 1191704921 743 QSQLRLEEKTRECGTLARQLESAIEDARRQVEQTKEHALSKERAAQNK 790
Cdd:PTZ00121 1661 IKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELK 1708
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
373-832 |
6.32e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.96 E-value: 6.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 373 KAEVEAIMEQ-----LKELKQKGDRDKESLKKaIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVV 447
Cdd:PRK02224 193 KAQIEEKEEKdlherLNGLESELAELDEEIER-YEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 448 KEKGDLELEIIVLNDRVTDLvnqqqtleekmREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQL 527
Cdd:PRK02224 272 REREELAEEVRDLRERLEEL-----------EEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAH 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 528 KASVKNYEGMIDNYKSQVMKTRLEADEVAAqlercdkenkilkdemnkEIEAARRQFQSQLADLQQLPDILKITEAKLAE 607
Cdd:PRK02224 341 NEEAESLREDADDLEERAEELREEAAELES------------------ELEEAREAVEDRREEIEELEEEIEELRERFGD 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 608 CQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREkhqasqkenkqlslKVDELERLEALGPISVLFLGPETFSHLA 687
Cdd:PRK02224 403 APVDLGNAEDFLEELREERDELREREAELEATLRTARE--------------RVEEAEALLEAGKCPECGQPVEGSPHVE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 688 VFCLVCGSVEGLEA----LEGTRQTSEEKLLPFQWKLEA-----TSAQNIEFL-QVIAKREEAIHQSQLRLEEKTREcgt 757
Cdd:PRK02224 469 TIEEDRERVEELEAeledLEEEVEEVEERLERAEDLVEAedrieRLEERREDLeELIAERRETIEEKRERAEELRER--- 545
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1191704921 758 lARQLESAIEDARRQVEQTKEHAlskeRAAQNKILDLETQLSRTKTELSQLR--RSRDDADRRYQSRLQDLKDRLEQ 832
Cdd:PRK02224 546 -AAELEAEAEEKREAAAEAEEEA----EEAREEVAELNSKLAELKERIESLEriRTLLAAIADAEDEIERLREKREA 617
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
309-835 |
8.74e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.21 E-value: 8.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 309 KDKEVEELLQEIQCEKAQ---AKTASELSKSMESMRGHLQA------QLRSKEAENSRLCMQIKNLERSGNQHKAEVEAI 379
Cdd:PRK03918 147 REKVVRQILGLDDYENAYknlGEVIKEIKRRIERLEKFIKRtenieeLIKEKEKELEEVLREINEISSELPELREELEKL 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 380 MEQLKELKQ------KGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEaLSTLESWRSRYNQVVKEKGDL 453
Cdd:PRK03918 227 EKEVKELEElkeeieELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKE-LKELKEKAEEYIKLSEFYEEY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 454 ELEIIVLNDRVTDLVNQQQTLEEKMrEDRDSLVERLHRQTAEYSAFKLENERLKASfapmedklnqaHLEVQQLKASVKN 533
Cdd:PRK03918 306 LDELREIEKRLSRLEEEINGIEERI-KELEEKEERLEELKKKLKELEKRLEELEER-----------HELYEEAKAKKEE 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 534 yegmIDNYKSQvmKTRLEADEVAAQLERCDKENKILKDEMnKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQ 613
Cdd:PRK03918 374 ----LERLKKR--LTGLTPEKLEKELEELEKAKEEIEEEI-SKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELT 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 614 GYERKNI--DLTAIISDLRSRIEHQGDKLEMAR------EKHQASQKENKQLSLKVDELERLEA-LGPISVLFLGPETFS 684
Cdd:PRK03918 447 EEHRKELleEYTAELKRIEKELKEIEEKERKLRkelrelEKVLKKESELIKLKELAEQLKELEEkLKKYNLEELEKKAEE 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 685 HLAVFCLVCG----------SVEGLEALEGTR-------QTSEEKLLPFQWKLEATSAQNIEFLQVIAKREEAIHQ---- 743
Cdd:PRK03918 527 YEKLKEKLIKlkgeikslkkELEKLEELKKKLaelekklDELEEELAELLKELEELGFESVEELEERLKELEPFYNeyle 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 744 ---SQLRLEEKTRECGTLARQLESA----------IEDARRQVEQ-TKEHALSKERAAQNKILDLETQLSRTKTELSQLR 809
Cdd:PRK03918 607 lkdAEKELEREEKELKKLEEELDKAfeelaetekrLEELRKELEElEKKYSEEEYEELREEYLELSRELAGLRAELEELE 686
|
570 580
....*....|....*....|....*.
gi 1191704921 810 RSRDDADrryqSRLQDLKDRLEQSES 835
Cdd:PRK03918 687 KRREEIK----KTLEKLKEELEEREK 708
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
371-774 |
8.95e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.21 E-value: 8.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 371 QHKAEVEAIMEQLKELKQKGDRdKESLKKAIRAQKERAEKSEEYAEQLHVQLADK-DLYVAEALSTLESWRSRYNQVVKE 449
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIER-LDLIIDEKRQQLERLRREREKAERYQALLKEKrEYEGYELLKEKEALERQKEAIERQ 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 450 KGDLELEIIVLNDRVTDLVNQQQTLEEKMREdrdsLVERLHRQTA-EYSAFKLENERLKASFAPMEDKLNQAHLEVQQLK 528
Cdd:TIGR02169 246 LASLEEELEKLTEEISELEKRLEEIEQLLEE----LNKKIKDLGEeEQLRVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 529 ASVKNYEGMIDNYKSqvmktrleadevaaqlercdkenkilkdemnkEIEAARRQFQSQLADLQQLPDILKITEAKLAec 608
Cdd:TIGR02169 322 ERLAKLEAEIDKLLA--------------------------------EIEELEREIEEERKRRDKLTEEYAELKEELE-- 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 609 qdqlqgyerknidltaiisDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDELER-LEALGPISVLFLGPETFSHLA 687
Cdd:TIGR02169 368 -------------------DLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKReLDRLQEELQRLSEELADLNAA 428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 688 vfclVCGSVEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTL---ARQLES 764
Cdd:TIGR02169 429 ----IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAeaqARASEE 504
|
410
....*....|
gi 1191704921 765 AIEDARRQVE 774
Cdd:TIGR02169 505 RVRGGRAVEE 514
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
161-411 |
9.79e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 9.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 161 AHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTD 240
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 241 INTLTRQKELLLQKLSTFEETNRtLRDLLREQHCKEDSERLMeqqgaLLKRLAEADSEKArlllllqdkdkevEELlqei 320
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPP-LALLLSPEDFLDAVRRLQ-----YLKYLAPARREQA-------------EEL---- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 321 qceKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKA 400
Cdd:COG4942 156 ---RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
250
....*....|.
gi 1191704921 401 IRAQKERAEKS 411
Cdd:COG4942 233 EAEAAAAAERT 243
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
361-612 |
1.07e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 46.20 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 361 QIKNLERSGNQHKAE-VEAIMEQLKELkqkgDRDKESLKKAIRAQK---ERAEKSEEYAEQLhVQLADKDLYVAEALSTl 436
Cdd:PRK10929 31 ELEQAKAAKTPAQAEiVEALQSALNWL----EERKGSLERAKQYQQvidNFPKLSAELRQQL-NNERDEPRSVPPNMST- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 437 eswrsrynqvvkekGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPmEDK 516
Cdd:PRK10929 105 --------------DALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLGTP-NTP 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 517 LNQAHL-----EVQQLKASVKNYE--GMIDNYKSQVmkTRLEADEVAAQLERCDKENKILKDEMNkeieaARRQFQSQLA 589
Cdd:PRK10929 170 LAQAQLtalqaESAALKALVDELElaQLSANNRQEL--ARLRSELAKKRSQQLDAYLQALRNQLN-----SQRQREAERA 242
|
250 260
....*....|....*....|...
gi 1191704921 590 dlqqlpdiLKITEaKLAECQDQL 612
Cdd:PRK10929 243 --------LESTE-LLAEQSGDL 256
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
281-588 |
1.50e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.50 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 281 LMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQ-AQLRSKEAENSRLC 359
Cdd:pfam17380 277 IVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERmAMERERELERIRQE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 360 MQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEAlstlESW 439
Cdd:pfam17380 357 ERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQ----EEA 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 440 RSRYNQVVKEKGDLELEIIvlndRVTDLVNQQQtleekmredrdslVERLHRQTAEYSAFKLENERLKASFAPMEDkLNQ 519
Cdd:pfam17380 433 RQREVRRLEEERAREMERV----RLEEQERQQQ-------------VERLRQQEEERKRKKLELEKEKRDRKRAEE-QRR 494
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 520 AHLEvQQLKAsvkNYEGMIDNYKSQVMKTRLEADEVAAQLErcDKENKILKDEMNKEIE-AARRQFQSQL 588
Cdd:pfam17380 495 KILE-KELEE---RKQAMIEEERKRKLLEKEMEERQKAIYE--EERRREAEEERRKQQEmEERRRIQEQM 558
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
457-670 |
3.79e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.23 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 457 IIVLNDRVTDLVNQQQTLEEKMREDRDsLVERLHRQTAEysafklENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEG 536
Cdd:PHA02562 176 IRELNQQIQTLDMKIDHIQQQIKTYNK-NIEEQRKKNGE------NIARKQNKYDELVEEAKTIKAEIEELTDELLNLVM 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 537 MIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDemNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYE 616
Cdd:PHA02562 249 DIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEK--GGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1191704921 617 RKNIDLTAI---ISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLK-VDELERLEAL 670
Cdd:PHA02562 327 EIMDEFNEQskkLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEfVDNAEELAKL 384
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
114-413 |
4.15e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 4.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 114 KMNRYDKKIDSLMNAVGCLKSEVKMQKGERqmAKRFLEERKEELEEVAHEL--AETEHENTVLRHNIERMKEEKDFTILQ 191
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAEAKKKADEAKKAEE--AKKADEAKKAEEAKKADEAkkAEEKKKADELKKAEELKKAEEKKKAEE 1568
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 192 KKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDintlTRQKELLLQKLSTFEETNRTLRDLLRE 271
Cdd:PTZ00121 1569 AKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE----AKIKAEELKKAEEEKKKVEQLKKKEAE 1644
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 272 QHCKEDSERLMEQQGAL----LKRLAEADSEKARLLLLLQDKDKEVEELLQEiqcEKAQAKTASELSKSMESMRGHLQaQ 347
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIkaaeEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK---EAEEAKKAEELKKKEAEEKKKAE-E 1720
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1191704921 348 LRSKEAENSrlcMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEE 413
Cdd:PTZ00121 1721 LKKAEEENK---IKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE 1783
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
275-854 |
5.63e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.88 E-value: 5.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 275 KEDSERLMEQQGALLKRLAEADSEKARLLLLLQdkdkEVEELLQEIqcEKAQAKTASElsksmESMRGHLQAQLRSKEAE 354
Cdd:PRK02224 219 DEEIERYEEQREQARETRDEADEVLEEHEERRE----ELETLEAEI--EDLRETIAET-----EREREELAEEVRDLRER 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 355 NSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKK---AIRAQKERAEKSEEYAEQLHVQLADKDLYVAE 431
Cdd:PRK02224 288 LEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEEcrvAAQAHNEEAESLREDADDLEERAEELREEAAE 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 432 ALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLE---EKMREDRDSLVERLHRQTAEYSAFK---LENER 505
Cdd:PRK02224 368 LESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEdflEELREERDELREREAELEATLRTARervEEAEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 506 LKASFA------PMEDklnQAHLEVqqlkasvknyegmIDNYKSQVMKtrLEADEVAAQLERCDKENKILKDEMNKEIEA 579
Cdd:PRK02224 448 LLEAGKcpecgqPVEG---SPHVET-------------IEEDRERVEE--LEAELEDLEEEVEEVEERLERAEDLVEAED 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 580 ARRQFQSQLADLQQLpdiLKITEAKLAECQDQLQGyerknidLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSL 659
Cdd:PRK02224 510 RIERLEERREDLEEL---IAERRETIEEKRERAEE-------LRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNS 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 660 KVDEL-ERLEALGPIsvlflgpetfshlavfclvcgsVEGLEALEGTRQTSEEkllpFQWKLEATSAQNIEflqviaKRE 738
Cdd:PRK02224 580 KLAELkERIESLERI----------------------RTLLAAIADAEDEIER----LREKREALAELNDE------RRE 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 739 eaihqsqlRLEEKtREcgtLARQLESAIEDARrqVEQTKEhalSKERAAQnKILDLETQLSRTKTELSQLRRSRDDADRR 818
Cdd:PRK02224 628 --------RLAEK-RE---RKRELEAEFDEAR--IEEARE---DKERAEE-YLEQVEEKLDELREERDDLQAEIGAVENE 689
|
570 580 590
....*....|....*....|....*....|....*.
gi 1191704921 819 YQsRLQDLKDRLEQSESTnrsmqnyVQFLKSSYANV 854
Cdd:PRK02224 690 LE-ELEELRERREALENR-------VEALEALYDEA 717
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
179-450 |
1.23e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.42 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 179 ERMKEEKdFTILQKKHLQQEKECLMS------KLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKEL-- 250
Cdd:pfam17380 286 ERQQQEK-FEKMEQERLRQEKEEKAReverrrKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELer 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 251 -LLQKLSTFEETNRTLRDLLREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKT 329
Cdd:pfam17380 365 iRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEER 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 330 ASELS--KSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQ-LKELKQKG----------DRDKES 396
Cdd:pfam17380 445 AREMErvRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKeLEERKQAMieeerkrkllEKEMEE 524
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1191704921 397 LKKAIRAQKERAEKSEEYAEQLHVQLADKdlyVAEALSTLESWRSRYNQVVKEK 450
Cdd:pfam17380 525 RQKAIYEEERRREAEEERRKQQEMEERRR---IQEQMRKATEERSRLEAMERER 575
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
374-667 |
1.34e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 42.73 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 374 AEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQL---HVQLADKDLYVAE-ALSTLESWR--SRYNQVV 447
Cdd:TIGR01612 540 KEIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIKDLfdkYLEIDDEIIYINKlKLELKEKIKniSDKNEYI 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 448 KEKGDLElEIIVLND------------RVTDLVNQQQT--------LEEKMREDRDSLVERLHRQTAEYSafkLENERLK 507
Cdd:TIGR01612 620 KKAIDLK-KIIENNNayidelakispyQVPEHLKNKDKiystikseLSKIYEDDIDALYNELSSIVKENA---IDNTEDK 695
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 508 ASFAPMEDKLNQAHLEVQQLK-ASVKNYEGMIDNYKSQVMKTRLEADEVAAQlERCDKENKILKDEMNKEieaarRQFQS 586
Cdd:TIGR01612 696 AKLDDLKSKIDKEYDKIQNMEtATVELHLSNIENKKNELLDIIVEIKKHIHG-EINKDLNKILEDFKNKE-----KELSN 769
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 587 QLADLQQLPDILKITEAKLAECQDQLQgyERKNIDLTaiisdlrsriehqgdKLEMAREKHQASQKENKQLSLKVDELER 666
Cdd:TIGR01612 770 KINDYAKEKDELNKYKSKISEIKNHYN--DQINIDNI---------------KDEDAKQNYDKSKEYIKTISIKEDEIFK 832
|
.
gi 1191704921 667 L 667
Cdd:TIGR01612 833 I 833
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
113-839 |
1.89e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.27 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 113 CKMNRYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEErkeeLEEVAHELAETEHENTVLRHNIERMKEEKDFTILQK 192
Cdd:pfam02463 170 KKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKA----LEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQEL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 193 KHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTF---------EETNR 263
Cdd:pfam02463 246 LRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDdeeklkeseKEKKK 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 264 TLRDLLREQHCKEDSERLM-EQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELS--KSMESM 340
Cdd:pfam02463 326 AEKELKKEKEEIEELEKELkELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELelKSEEEK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 341 RGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEY-AEQLH 419
Cdd:pfam02463 406 EAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLvKLQEQ 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 420 VQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLE-LEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSA 498
Cdd:pfam02463 486 LELLLSRQKLEERSQKESKARSGLKVLLALIKDGVgGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 499 FKLENERLKASFAPMEDKLNQAHLEVQQL-KASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKD------ 571
Cdd:pfam02463 566 LVRALTELPLGARKLRLLIPKLKLPLKSIaVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKEsakake 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 572 -------EMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAR 644
Cdd:pfam02463 646 sglrkgvSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLAD 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 645 EKHQASQKENKQLSLKVDEL--ERLEALGPISVLFLGPETFSHLAVFCLVCGSVEGLEALEGTRQTSEEKLLPFQWKLEA 722
Cdd:pfam02463 726 RVQEAQDKINEELKLLKQKIdeEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRA 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 723 TSAQNIEFLQVIAKREEAIHQSQLRLEEKTRE----CGTLARQLESAIEDARRQVEQTKEHALSKERAAQNKILDLETQL 798
Cdd:pfam02463 806 LEEELKEEAELLEEEQLLIEQEEKIKEEELEElaleLKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLK 885
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1191704921 799 SRTKTELSQLRRSRDDADRRYQSRLQDLKDRLEQSESTNRS 839
Cdd:pfam02463 886 DELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEE 926
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
270-843 |
2.02e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.05 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 270 REQHCKEDSERLMEQQGALLKRLAEADSEKARLLlllqDKDKEVEELLQEIQCEKAQ-AKTASELSKSMESMRGHLQAQL 348
Cdd:PTZ00121 1247 EERNNEEIRKFEEARMAHFARRQAAIKAEEARKA----DELKKAEEKKKADEAKKAEeKKKADEAKKKAEEAKKADEAKK 1322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 349 RSKEAENSRLCMQIKNLE--RSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEY--AEQLHVQlAD 424
Cdd:PTZ00121 1323 KAEEAKKKADAAKKKAEEakKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKkkADEAKKK-AE 1401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 425 KDLYVAEALSTLESWRSRYNQVVKEKGDleleiivlndrvtdlVNQQQTLEEKMREDRDSlvERLHRQTAEysAFKLENE 504
Cdd:PTZ00121 1402 EDKKKADELKKAAAAKKKADEAKKKAEE---------------KKKADEAKKKAEEAKKA--DEAKKKAEE--AKKAEEA 1462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 505 RLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMidNYKSQVMKTRLEADEVAAQLERCDKENK---ILKDEMNKEIEAAR 581
Cdd:PTZ00121 1463 KKKAEEAKKADEAKKKAEEAKKADEAKKKAEEA--KKKADEAKKAAEAKKKADEAKKAEEAKKadeAKKAEEAKKADEAK 1540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 582 RQFQSQLAD-LQQLPDILKITEAKLAEcqDQLQGYERKNIDL--TAIISDLRSRIEHQGDKLEMAREKHQASQ-KENKQL 657
Cdd:PTZ00121 1541 KAEEKKKADeLKKAEELKKAEEKKKAE--EAKKAEEDKNMALrkAEEAKKAEEARIEEVMKLYEEEKKMKAEEaKKAEEA 1618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 658 SLKVDELERLEAL-GPISVLFLGPETFSHLAVFCLVCGSVEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEfLQVIAK 736
Cdd:PTZ00121 1619 KIKAEELKKAEEEkKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAA-EALKKE 1697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 737 REEAIHQSQLRleEKTRECGTLARQLESAIEDARRQVEQTKEHALSKERAAQNKILDLE-----TQLSRTKTELSQLRRS 811
Cdd:PTZ00121 1698 AEEAKKAEELK--KKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEekkkiAHLKKEEEKKAEEIRK 1775
|
570 580 590
....*....|....*....|....*....|..
gi 1191704921 812 RDDADRRYQSRLQDLKDRLEQSESTNRSMQNY 843
Cdd:PTZ00121 1776 EKEAVIEEELDEEDEKRRMEVDKKIKDIFDNF 1807
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
138-834 |
2.35e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 41.88 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 138 MQKGERQMAKRFLEERKEELEEVAhelaetehentvlrhnIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEmdgaaAA 217
Cdd:pfam02463 140 QGGKIEIIAMMKPERRLEIEEEAA----------------GSRLKRKKKEALKKLIEETENLAELIIDLEELK-----LQ 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 218 KQVMALKDTIGKLKTEKQMtctdINTLTRQKELLLQKLSTFEETNRTLRDLLREQHCKEDSE-RLMEQQGALLKRLAEAD 296
Cdd:pfam02463 199 ELKLKEQAKKALEYYQLKE----KLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSkQEIEKEEEKLAQVLKEN 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 297 SEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKS----MESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQH 372
Cdd:pfam02463 275 KEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEklkeSEKEKKKAEKELKKEKEEIEELEKELKELEIKREAE 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 373 KAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLaDKDLYVAEALSTLESWRSRYNQVVKEKGD 452
Cdd:pfam02463 355 EEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEE-KEAQLLLELARQLEDLLKEEKKEELEILE 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 453 LELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVK 532
Cdd:pfam02463 434 EEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLL 513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 533 NYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQL 612
Cdd:pfam02463 514 ALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKS 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 613 QGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDELERLEALGPISVLFLGPetfSHLAVFCLV 692
Cdd:pfam02463 594 IAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEK---SEVKASLSE 670
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 693 CGSVEGLEALEGTRQTSEEKLLPFQWKLEATSAQNIEFLQVIAKREEaihQSQLRLEEKTRECGTLARQLESAIEDARRQ 772
Cdd:pfam02463 671 LTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKL---EAEELLADRVQEAQDKINEELKLLKQKIDE 747
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1191704921 773 VEQTKEHALSKERAAQNKILDLETQLSRTKTELSQLRRSRDDADRRYQSRLQDLKDRLEQSE 834
Cdd:pfam02463 748 EEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEE 809
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
309-441 |
2.41e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.10 E-value: 2.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 309 KDKEVEELLQEIQcEKAQAKTASELSK-SMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELK 387
Cdd:PRK09039 51 KDSALDRLNSQIA-ELADLLSLERQGNqDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSEK 129
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1191704921 388 QKGDRDKESLK------KAIRAQKERAEK----SEEYAEQLHVQLAD--KDLYVAEA--LSTLESWRS 441
Cdd:PRK09039 130 QVSARALAQVEllnqqiAALRRQLAALEAaldaSEKRDRESQAKIADlgRRLNVALAqrVQELNRYRS 197
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
275-480 |
2.71e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 275 KEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAE 354
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 355 NSRlcmQIKNLERSGNQHKAEV-------EAIMEQLKELKQKGDRDKESLkKAIRAQKERAEKSEEYAEQLHVQLADKDL 427
Cdd:COG4942 106 LAE---LLRALYRLGRQPPLALllspedfLDAVRRLQYLKYLAPARREQA-EELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1191704921 428 YVAEALSTLESWRSRYNQVVKEkgdLELEIIVLNDRVTDLVNQQQTLEEKMRE 480
Cdd:COG4942 182 ELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIAR 231
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
188-424 |
2.96e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.58 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 188 TILQKKHLQQEkeclmskLVEAEMD-GAAAAKQVMALKDTIGKLKTEKQmtctdinTLTRQKELLlQKLSTFEETNRTLR 266
Cdd:PRK10929 21 TAPDEKQITQE-------LEQAKAAkTPAQAEIVEALQSALNWLEERKG-------SLERAKQYQ-QVIDNFPKLSAELR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 267 DLLREQHCKEDSERLMEQQGALLKRLAEADS---EKARLLLLLQDKDKEVEELLQEIQCEKAQAKTA-SELSKSMESMRG 342
Cdd:PRK10929 86 QQLNNERDEPRSVPPNMSTDALEQEILQVSSqllEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQlNEIERRLQTLGT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 343 ----HLQAQLRSKEAENSRLCMQIKNLER---SGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKER-AEKSEEY 414
Cdd:PRK10929 166 pntpLAQAQLTALQAESAALKALVDELELaqlSANNRQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQReAERALES 245
|
250
....*....|
gi 1191704921 415 AEQLHVQLAD 424
Cdd:PRK10929 246 TELLAEQSGD 255
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
233-668 |
3.10e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 3.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 233 EKQMTCTDINTlTRQKELLLQKLSTfEETNRTLRDLLREQhckedSERLMEQQGALLKRLAEADSEKARLLLllqdkdke 312
Cdd:PRK04863 241 ENRMTLEAIRV-TQSDRDLFKHLIT-ESTNYVAADYMRHA-----NERRVHLEEALELRRELYTSRRQLAAE-------- 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 313 vEELLQEIQCE-KAQAKTASELSKSMESMRGHL---QAQLRSKEAENsrlcmqiknlersgnQHKAEVEAIMEQLKELKQ 388
Cdd:PRK04863 306 -QYRLVEMARElAELNEAESDLEQDYQAASDHLnlvQTALRQQEKIE---------------RYQADLEELEERLEEQNE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 389 KgdrDKESLKKAIRAQkERAEKSEEYAEQLHVQLADkdlyVAEALSTLESWRSRYNQVVK--EK-----GDLELEIIVLN 461
Cdd:PRK04863 370 V---VEEADEQQEENE-ARAEAAEEEVDELKSQLAD----YQQALDVQQTRAIQYQQAVQalERakqlcGLPDLTADNAE 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 462 DRVTDLVNQQQTLEEKMR--EDRDSLVERLHRQTAEysAFKLenerlkasfapmedklnqahleVQQLKASVknyegmid 539
Cdd:PRK04863 442 DWLEEFQAKEQEATEELLslEQKLSVAQAAHSQFEQ--AYQL----------------------VRKIAGEV-------- 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 540 nyksqvmkTRLEADEVAAQLERCDKENKILkdemnkeieAARR-QFQSQLADLQQLPDILKITEAKLAECQDQLQGYERK 618
Cdd:PRK04863 490 --------SRSEAWDVARELLRRLREQRHL---------AEQLqQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDD 552
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1191704921 619 NIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDELERLE 668
Cdd:PRK04863 553 EDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARA 602
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
120-582 |
3.30e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.28 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 120 KKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEK 199
Cdd:PTZ00121 1366 AEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK 1445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 200 -ECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQmtctdintltRQKELLLQKLSTFEETNRTLRDLLREQHCKEDS 278
Cdd:PTZ00121 1446 aDEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEA----------KKADEAKKKAEEAKKKADEAKKAAEAKKKADEA 1515
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 279 ERLMEQQGALLKRLAE----ADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLqaqlrSKEAE 354
Cdd:PTZ00121 1516 KKAEEAKKADEAKKAEeakkADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEE-----AKKAE 1590
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 355 NSRLCMQIKNLERSgNQHKAEvEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALS 434
Cdd:PTZ00121 1591 EARIEEVMKLYEEE-KKMKAE-EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAK 1668
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 435 TLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQ----TLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASF 510
Cdd:PTZ00121 1669 KAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEElkkkEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE 1748
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1191704921 511 APMEDKLNQahlEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLErCDKENKILKDEMNKEIEAARR 582
Cdd:PTZ00121 1749 AKKDEEEKK---KIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRME-VDKKIKDIFDNFANIIEGGKE 1816
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
191-385 |
3.30e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 191 QKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELllqklstfEETNRTLRDLLR 270
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREI--------AELEAELERLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 271 EQhckEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKsmESMRGHLQAQLRS 350
Cdd:COG4913 683 SS---DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLAR--LELRALLEERFAA 757
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1191704921 351 KEAENSRLCM------QIKNLERSGNQHKAEVEAIMEQLKE 385
Cdd:COG4913 758 ALGDAVERELrenleeRIDALRARLNRAEEELERAMRAFNR 798
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
246-506 |
3.40e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 41.36 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 246 RQKELLLQKLSTFEETNRTLRDLLRE-QHCKEDSERLMEQQGALLKRLAEA-DSEKARLLLLLQDKDKEVEELLQEIQCE 323
Cdd:pfam12128 622 AAEEQLVQANGELEKASREETFARTAlKNARLDLRRLFDEKQSEKDKKNKAlAERKDSANERLNSLEAQLKQLDKKHQAW 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 324 KAQAK-TASELSKSMESMRGHLQAQLRSKEAensRLCMQIKNLErsgNQHKAEVEAIMEQLK-ELKQKG-DRDKES-LKK 399
Cdd:pfam12128 702 LEEQKeQKREARTEKQAYWQVVEGALDAQLA---LLKAAIAARR---SGAKAELKALETWYKrDLASLGvDPDVIAkLKR 775
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 400 AIR---AQKERAEKSEEYAEQLHVQLAdkdlyvaealstlESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEE 476
Cdd:pfam12128 776 EIRtleRKIERIAVRRQEVLRYFDWYQ-------------ETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRA 842
|
250 260 270
....*....|....*....|....*....|
gi 1191704921 477 KMREDRDSLVERLHRQTAEYSAFKLENERL 506
Cdd:pfam12128 843 KLEMERKASEKQQVRLSENLRGLRCEMSKL 872
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
335-594 |
3.87e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.77 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 335 KSMESMRGHLQAQLRSKEAENSRLcMQIKnlERSGNQHKAE--VEAIMEQLkeLKQKGDRDKESLKKAIRAQKERAEKSE 412
Cdd:COG3206 114 ASREAAIERLRKNLTVEPVKGSNV-IEIS--YTSPDPELAAavANALAEAY--LEQNLELRREEARKALEFLEEQLPELR 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 413 EYAEQLHVQLADkdlYVAEA-LSTLESwrsRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLhr 491
Cdd:COG3206 189 KELEEAEAALEE---FRQKNgLVDLSE---EAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELL-- 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 492 QTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMID--------NYKSQVMKTRLEADEVAAQLERCD 563
Cdd:COG3206 261 QSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQqeaqrilaSLEAELEALQAREASLQAQLAQLE 340
|
250 260 270
....*....|....*....|....*....|....*..
gi 1191704921 564 KENKILKD------EMNKEIEAARRQFQSQLADLQQL 594
Cdd:COG3206 341 ARLAELPEleaelrRLEREVEVARELYESLLQRLEEA 377
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
380-846 |
3.90e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 3.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 380 MEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAE-QLHVQLADKDLyvaEALSTLESWRSRYnqvvKEKGDLELEII 458
Cdd:COG4717 70 LKELKELEEELKEAEEKEEEYAELQEELEELEEELEElEAELEELREEL---EKLEKLLQLLPLY----QELEALEAELA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 459 VLNDRVTDLVNQQQTLEEKMREdrdslVERLHRQTAEYSAfKLENERLKASFApMEDKLNQAHLEVQQLKASVKNYEGMI 538
Cdd:COG4717 143 ELPERLEELEERLEELRELEEE-----LEELEAELAELQE-ELEELLEQLSLA-TEEELQDLAEELEELQQRLAELEEEL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 539 DNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLpdILKITEAKLAECQdqlqgyerk 618
Cdd:COG4717 216 EEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSL--ILTIAGVLFLVLG--------- 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 619 nidLTAIISDLRSRIEHQGDKlEMAREKHQASQKENKQLSLKvDELERLEALGPISVLFLgPETFSHLAVFCLVCGSVEG 698
Cdd:COG4717 285 ---LLALLFLLLAREKASLGK-EAEELQALPALEELEEEELE-ELLAALGLPPDLSPEEL-LELLDRIEELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 699 LEAlEGTRQTSEEKLLPFqwkLEATSAQNIEFLQVIAKREEaihqsqlRLEEKTRECGTLARQLESAIEDARRQVEQTKE 778
Cdd:COG4717 359 LEE-ELQLEELEQEIAAL---LAEAGVEDEEELRAALEQAE-------EYQELKEELEELEEQLEELLGELEELLEALDE 427
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1191704921 779 HALskeraaQNKILDLETQLSRTKTELSQLrrsrddadrryQSRLQDLKDRLEQSESTNRSMQNYVQF 846
Cdd:COG4717 428 EEL------EEELEELEEELEELEEELEEL-----------REELAELEAELEQLEEDGELAELLQEL 478
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
170-622 |
4.53e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 40.97 E-value: 4.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 170 ENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAE---MDGAAAAKQVMALKDTIgkLKTEKQMTcTDINTLTR 246
Cdd:PTZ00440 729 KYNDLKSSIEEYKEEEEKLEVYKHQIINRKNEFILHLYENDkdlPDGKNTYEEFLQYKDTI--LNKENKIS-NDINILKE 805
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 247 QKELLLQKLSTFEETNRTLRDLLREQHckEDSERLMEQQGALLKRLAEADSEKarlllLLQDKDKEVEELLQEIQCEKAQ 326
Cdd:PTZ00440 806 NKKNNQDLLNSYNILIQKLEAHTEKND--EELKQLLQKFPTEDENLNLKELEK-----EFNENNQIVDNIIKDIENMNKN 878
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 327 AKTASELSKSMESMRGHLQAqlrskeaensrlcmqIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKE 406
Cdd:PTZ00440 879 INIIKTLNIAINRSNSNKQL---------------VEHLLNNKIDLKNKLEQHMKIINTDNIIQKNEKLNLLNNLNKEKE 943
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 407 RAEK--SEEYAEQLHVQLADKDLYVAEA-----------LSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQt 473
Cdd:PTZ00440 944 KIEKqlSDTKINNLKMQIEKTLEYYDKSkeningndgthLEKLDKEKDEWEHFKSEIDKLNVNYNILNKKIDDLIKKQH- 1022
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 474 leEKMREDRDSLVERLHRQTAEYSAFKLEN-ERLKASFAPME-------DKLNQAHLEVQQLKASVKNYEGMIDNYKSQV 545
Cdd:PTZ00440 1023 --DDIIELIDKLIKEKGKEIEEKVDQYISLlEKMKTKLSSFHfnidikkYKNPKIKEEIKLLEEKVEALLKKIDENKNKL 1100
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1191704921 546 MKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDIL-KITEAKLAECQdqlqgYERKNIDL 622
Cdd:PTZ00440 1101 IEIKNKSHEHVVNADKEKNKQTEHYNKKKKSLEKIYKQMEKTLKELENMNLEDiTLNEVNEIEIE-----YERILIDH 1173
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
288-664 |
6.03e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 40.26 E-value: 6.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 288 LLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKtasELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLER 367
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWE---RQRRELESRVAELKEELRQSREKHEELEEKYKELSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 368 SGNQHKAEVEAIMEQLKELKQK---GDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDlyvaealSTLESWRSRYN 444
Cdd:pfam07888 109 SSEELSEEKDALLAQRAAHEARireLEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEE-------AERKQLQAKLQ 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 445 QVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERlHRQTAeysafklENERLKASFAPMEDKLNQAHLEV 524
Cdd:pfam07888 182 QTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTA-HRKEA-------ENEALLEELRSLQERLNASERKV 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 525 QQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAK 604
Cdd:pfam07888 254 EGLGEELSSMAAQRDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEER 333
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 605 LAECQDQLQGYErknIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDEL 664
Cdd:pfam07888 334 LQEERMEREKLE---VELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAEKQEL 390
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
269-416 |
6.49e-03 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 39.79 E-value: 6.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 269 LREQHCKEDSERLMEQQGALLKRLAEADSEK-ARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQ 347
Cdd:PRK09510 80 QRKKKEQQQAEELQQKQAAEQERLKQLEKERlAAQEQKKQAEEAAKQAALKQKQAEEAAAKAAAAAKAKAEAEAKRAAAA 159
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 348 LRSKEAENSRLCM-QIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAE 416
Cdd:PRK09510 160 AKKAAAEAKKKAEaEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKKAAAEAKKKAAAEAKAAAAK 229
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
156-667 |
7.17e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.05 E-value: 7.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 156 ELEEVAHELAETEHENTVLRHNIERMKEEKdftilqkkhlqQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQ 235
Cdd:PRK03918 201 ELEEVLREINEISSELPELREELEKLEKEV-----------KELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 236 MTCTDINTLtRQKELLLQKLSTFEETNRTLRDLLRE-----QHCKEDSERLMEQQGALLKRLAEADSEKARLllllqdkd 310
Cdd:PRK03918 270 ELKKEIEEL-EEKVKELKELKEKAEEYIKLSEFYEEyldelREIEKRLSRLEEEINGIEERIKELEEKEERL-------- 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 311 KEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQaQLRSKEAENS--RLCMQIKNLERSGNQHKAEVEAIMEQLKELKQ 388
Cdd:PRK03918 341 EELKKKLKELEKRLEELEERHELYEEAKAKKEELE-RLKKRLTGLTpeKLEKELEELEKAKEEIEEEISKITARIGELKK 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 389 KgdrdKESLKKAIRAQKE--------RAEKSEEYAEQLhvqLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVL 460
Cdd:PRK03918 420 E----IKELKKAIEELKKakgkcpvcGRELTEEHRKEL---LEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKE 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 461 ND--RVTDLVNQQQTLEEKMREDRdslVERLHRQTAEYSAFKLENERLKASFAPMEDKLNqahlEVQQLKASVKNYEGMI 538
Cdd:PRK03918 493 SEliKLKELAEQLKELEEKLKKYN---LEELEKKAEEYEKLKEKLIKLKGEIKSLKKELE----KLEELKKKLAELEKKL 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 539 DNYKSqvmktrlEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSqladLQQLPDILKITEAKLAECQDQLQGYERK 618
Cdd:PRK03918 566 DELEE-------ELAELLKELEELGFESVEELEERLKELEPFYNEYLE----LKDAEKELEREEKELKKLEEELDKAFEE 634
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 1191704921 619 NIDLTAIISDLRSRIEHQG-----DKLEMAREKHQASQKENKQLSLKVDELERL 667
Cdd:PRK03918 635 LAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEELEKR 688
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
162-588 |
7.78e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 39.75 E-value: 7.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 162 HELAETEHENTVLRHNIERMKEEKDF--TILQKKHLQQEKECLMSKLVEAEmdgaaaaKQVMALKDtigkLKTEKQMTCT 239
Cdd:COG4717 102 EELEELEAELEELREELEKLEKLLQLlpLYQELEALEAELAELPERLEELE-------ERLEELRE----LEEELEELEA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 240 DINTLTRQKELLLQKLStfeetnrtLRDLLREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQD--KDKEVEELL 317
Cdd:COG4717 171 ELAELQEELEELLEQLS--------LATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQleNELEAAALE 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 318 QEIQCEKAQAKTAS----------ELSKSMESMRGHLQAQL-------RSKEAENSRLCMQIKNLERSGNQHKAEVEAIM 380
Cdd:COG4717 243 ERLKEARLLLLIAAallallglggSLLSLILTIAGVLFLVLgllallfLLLAREKASLGKEAEELQALPALEELEEEELE 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 381 EQLKELKQKGDRDKESLKKAIRAQKE------RAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVvkekgdle 454
Cdd:COG4717 323 ELLAALGLPPDLSPEELLELLDRIEElqellrEAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQA-------- 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 455 leiivlnDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEysAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNY 534
Cdd:COG4717 395 -------EEYQELKEELEELEEQLEELLGELEELLEALDEE--ELEEELEELEEELEELEEELEELREELAELEAELEQL 465
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1191704921 535 EGmidnyKSQVMKTRLEADEVAAQLERCDKE---NKILKDEMNKEIEAARRQFQSQL 588
Cdd:COG4717 466 EE-----DGELAELLQELEELKAELRELAEEwaaLKLALELLEEAREEYREERLPPV 517
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
163-488 |
7.96e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.05 E-value: 7.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 163 ELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTctDIN 242
Cdd:TIGR02169 717 KIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHS--RIP 794
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 243 TLTRQKELLLQKLSTFEETNRTL-RDLLREQHCKEDSERLMEQqgaLLKRLAEADSEKARLLLLLQDKDKEVEELLQEIq 321
Cdd:TIGR02169 795 EIQAELSKLEEEVSRIEARLREIeQKLNRLTLEKEYLEKEIQE---LQEQRIDLKEQIKSIEKEIENLNGKKEELEEEL- 870
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 322 cEKAQAKTaselsKSMESMRGHLQAQLRSKEAensrlcmQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAI 401
Cdd:TIGR02169 871 -EELEAAL-----RDLESRLGDLKKERDELEA-------QLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIE 937
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 402 RAQKERAEKSEEYAEQLHVQLadKDLYVAEALSTLESwrsrynqvVKEKGDLELEIIVlnDRVTDLVNQQQTLEekmrED 481
Cdd:TIGR02169 938 DPKGEDEEIPEEELSLEDVQA--ELQRVEEEIRALEP--------VNMLAIQEYEEVL--KRLDELKEKRAKLE----EE 1001
|
....*..
gi 1191704921 482 RDSLVER 488
Cdd:TIGR02169 1002 RKAILER 1008
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
392-607 |
8.67e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.36 E-value: 8.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 392 RDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLEswrsrynqvvkekgDLELEIIVLNDRVTDLVNQQ 471
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR--------------ALEQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 472 QTLEEKMREDRDSLVERL----HRQTAEYSAFKLENERLKASFAPME--DKLNQAHLE----VQQLKASVKNYEGMIDNY 541
Cdd:COG4942 93 AELRAELEAQKEELAELLralyRLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREqaeeLRADLAELAALRAELEAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1191704921 542 KSQVMKTRLEADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAE 607
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
282-438 |
8.77e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 38.75 E-value: 8.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 282 MEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQ---AQLRSKEAENSRL 358
Cdd:COG1579 2 MPEDLRALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLEleiEEVEARIKKYEEQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191704921 359 CMQIKNLErsgnqhkaEVEAIMEQLKELKqkgdRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLES 438
Cdd:COG1579 82 LGNVRNNK--------EYEALQKEIESLK----RRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDE 149
|
|
| |
