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Conserved domains on  [gi|939626267|ref|NP_001303491|]
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CCR4-NOT transcription complex subunit 10, isoform B [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Spy super family cl27809
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 294-382 9.99e-03

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG3914:

Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 38.82  E-value: 9.99e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939626267 294 NNMGVIHLRVRHYAIAAKFFQNALNFDQQLArnlrqstlqtmssarscEILYNLGVAMLHLRRPKEAFQCFLVPVKQFHS 373
Cdd:COG3914  116 FNLGNLLLALGRLEEALAALRRALALNPDFA-----------------EAYLNLGEALRRLGRLEEAIAALRRALELDPD 178


                 ....*....
gi 939626267 374 NPRLWLRMA 382
Cdd:COG3914  179 NAEALNNLG 187
 
Name Accession Description Interval E-value
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 294-382 9.99e-03

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 38.82  E-value: 9.99e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939626267 294 NNMGVIHLRVRHYAIAAKFFQNALNFDQQLArnlrqstlqtmssarscEILYNLGVAMLHLRRPKEAFQCFLVPVKQFHS 373
Cdd:COG3914  116 FNLGNLLLALGRLEEALAALRRALALNPDFA-----------------EAYLNLGEALRRLGRLEEAIAALRRALELDPD 178


                 ....*....
gi 939626267 374 NPRLWLRMA 382
Cdd:COG3914  179 NAEALNNLG 187
 
Name Accession Description Interval E-value
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 294-382 9.99e-03

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 38.82  E-value: 9.99e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 939626267 294 NNMGVIHLRVRHYAIAAKFFQNALNFDQQLArnlrqstlqtmssarscEILYNLGVAMLHLRRPKEAFQCFLVPVKQFHS 373
Cdd:COG3914  116 FNLGNLLLALGRLEEALAALRRALALNPDFA-----------------EAYLNLGEALRRLGRLEEAIAALRRALELDPD 178


                 ....*....
gi 939626267 374 NPRLWLRMA 382
Cdd:COG3914  179 NAEALNNLG 187
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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