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Conserved domains on  [gi|758818544|ref|NP_001291981|]
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transmembrane protein 59 isoform 6 [Homo sapiens]

Protein Classification

BSMAP domain-containing protein( domain architecture ID 10574093)

BSMAP domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
BSMAP super family cl13686
Brain specific membrane anchored protein; This family of proteins is found in eukaryotes. ...
 1-125 1.59e-47

Brain specific membrane anchored protein; This family of proteins is found in eukaryotes. Proteins in this family are typically between 285 and 331 amino acids in length. BSMAP has a putative transmembrane domain and is predicted to be a type I membrane glycoprotein.


The actual alignment was detected with superfamily member pfam12280:

Pssm-ID: 463519  Cd Length: 197  Bit Score: 154.10  E-value: 1.59e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758818544    1 MSLMPKMHLLFPLTLVRSFWSDMMDSAQSFITSSWTFYLQADDGKIVIFQSKPEIQYAPHLEQEPTNLRESSLSKMSYLQ 80
Cdd:pfam12280  61 ESLMPKIHLLSPLTLVSSFCDDIVSSAQSFISSTWTFYLQADDGKVVVFQSQPEIEYFLPEPFDIKPLFSLRHIGPQDPK 140

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 758818544   81 M----------RNSQAHRNFLEDGESDgFLRCLSLNSG---WILTTTLVLSVMVLLWI 125
Cdd:pfam12280 141 DkvkakkprepTISRSSGDGSPQPEHD-FLGCMSRRSGlprWILTTTLFLSVLVMLWL 197
 
Name Accession Description Interval E-value
BSMAP pfam12280
Brain specific membrane anchored protein; This family of proteins is found in eukaryotes. ...
 1-125 1.59e-47

Brain specific membrane anchored protein; This family of proteins is found in eukaryotes. Proteins in this family are typically between 285 and 331 amino acids in length. BSMAP has a putative transmembrane domain and is predicted to be a type I membrane glycoprotein.


Pssm-ID: 463519  Cd Length: 197  Bit Score: 154.10  E-value: 1.59e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758818544    1 MSLMPKMHLLFPLTLVRSFWSDMMDSAQSFITSSWTFYLQADDGKIVIFQSKPEIQYAPHLEQEPTNLRESSLSKMSYLQ 80
Cdd:pfam12280  61 ESLMPKIHLLSPLTLVSSFCDDIVSSAQSFISSTWTFYLQADDGKVVVFQSQPEIEYFLPEPFDIKPLFSLRHIGPQDPK 140

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 758818544   81 M----------RNSQAHRNFLEDGESDgFLRCLSLNSG---WILTTTLVLSVMVLLWI 125
Cdd:pfam12280 141 DkvkakkprepTISRSSGDGSPQPEHD-FLGCMSRRSGlprWILTTTLFLSVLVMLWL 197
 
Name Accession Description Interval E-value
BSMAP pfam12280
Brain specific membrane anchored protein; This family of proteins is found in eukaryotes. ...
 1-125 1.59e-47

Brain specific membrane anchored protein; This family of proteins is found in eukaryotes. Proteins in this family are typically between 285 and 331 amino acids in length. BSMAP has a putative transmembrane domain and is predicted to be a type I membrane glycoprotein.


Pssm-ID: 463519  Cd Length: 197  Bit Score: 154.10  E-value: 1.59e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758818544    1 MSLMPKMHLLFPLTLVRSFWSDMMDSAQSFITSSWTFYLQADDGKIVIFQSKPEIQYAPHLEQEPTNLRESSLSKMSYLQ 80
Cdd:pfam12280  61 ESLMPKIHLLSPLTLVSSFCDDIVSSAQSFISSTWTFYLQADDGKVVVFQSQPEIEYFLPEPFDIKPLFSLRHIGPQDPK 140

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 758818544   81 M----------RNSQAHRNFLEDGESDgFLRCLSLNSG---WILTTTLVLSVMVLLWI 125
Cdd:pfam12280 141 DkvkakkprepTISRSSGDGSPQPEHD-FLGCMSRRSGlprWILTTTLFLSVLVMLWL 197
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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