|
Name |
Accession |
Description |
Interval |
E-value |
| ZIP_TSC22D2 |
cd21939 |
leucine zipper domain found in TSC22 domain family protein 2; TSC22 domain family protein 2 ... |
669-731 |
9.67e-38 |
|
leucine zipper domain found in TSC22 domain family protein 2; TSC22 domain family protein 2 (TSC22D2), also called transforming growth factor beta-stimulated clone 22 domain family member 2, or TSC22-related-inducible leucine zipper protein 4 (TILZ4), may participate in the regulation of cell growth. It interacts with pyruvate kinase isoform M2 (PKM2) and WD repeat domain 77 (WDR77). The model corresponds to the conserved leucine zipper (ZIP) domain located at the C-terminus of TSC22D2. Its first helix is not basic and does not contain the consensus sequence, NXX(A)(A)XX(C/S)R, found in most basic region/leucine zipper (bZIP) proteins. Thus, the DNA-binding capability of the ZIP domain is not obvious. Similar to bZIP, ZIP forms homo- and heterodimers, resulting in many dimers that may have different effects on transcription.
Pssm-ID: 409279 Cd Length: 63 Bit Score: 134.71 E-value: 9.67e-38
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 737674573 669 AMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSNDQLSQLPTQQANPGST 731
Cdd:cd21939 1 AMDLVKSHLMYAVREEVEVLKEQIKELIERNSLLERENALLKSLSNNDQLSQLSTQQGNPSST 63
|
|
| TSC22 |
pfam01166 |
TSC-22/dip/bun family; |
670-726 |
1.37e-29 |
|
TSC-22/dip/bun family;
Pssm-ID: 460093 Cd Length: 57 Bit Score: 111.25 E-value: 1.37e-29
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 737674573 670 MDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSNDQLSQLPTQQA 726
Cdd:pfam01166 1 MDLVKSHLMYAVREEVEVLKEQIKELEERNSQLEEENSILRANASPEQLEQLSSQLQ 57
|
|
| ZIP_TSC22D4 |
cd21941 |
leucine zipper domain found in TSC22 domain family protein 4; TSC22 domain family protein 4 ... |
660-725 |
2.32e-29 |
|
leucine zipper domain found in TSC22 domain family protein 4; TSC22 domain family protein 4 (TSC22D4), also called TSC22-related-inducible leucine zipper protein 2 (TILZ2), or Tsc-22-like protein THG-1, is a transcriptional repressor that acts as a molecular determinant of insulin signalling and glucose handling. It also functions in hepatic lipid handling by regulating hepatic very-low-density-lipoprotein (VLDL) release and lipogenic gene expression. This model corresponds to the conserved leucine zipper (ZIP) domain located at the C-terminus of TSC22D4. Its first helix is not basic and does not contain the consensus sequence, NXX(A)(A)XX(C/S)R, found in most basic region/leucine zipper (bZIP) proteins. Thus, the DNA-binding capability of the ZIP domain is not obvious. Similar to bZIP, ZIP forms homo- and heterodimers, resulting in many dimers that may have different effects on transcription.
Pssm-ID: 409281 Cd Length: 74 Bit Score: 111.18 E-value: 2.32e-29
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 737674573 660 VAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSNDQLSQLPTQQ 725
Cdd:cd21941 1 VAIDNKIEQAMDLVKSHLLFAVREEVEVLKEQIKELSERNAALEQENSLLRSLATPQQLSRLQSRQ 66
|
|
| ZIP_TSC22D |
cd21936 |
leucine zipper domain found in the TSC22 domain family of leucine zipper transcription factors; ... |
669-717 |
5.62e-27 |
|
leucine zipper domain found in the TSC22 domain family of leucine zipper transcription factors; The TGF-beta-stimulated clone-22 domain (TSC22D) family includes TSC22D1-4 and similar proteins. They have diverse physiological functions, including cell growth, development, homeostasis, and immune regulation. All family members contain a conserved leucine zipper (ZIP) domain located at the C-terminus. Its first helix is not basic and does not contain the consensus sequence, NXX(A)(A)XX(C/S)R, found in most basic region/leucine zipper (bZIP) proteins. In the bZIP family of transcription factors, the leucine zipper acts as a dimerization domain and the upstream basic region as a DNA-binding domain. However, DNA-binding capability of TSC22D family proteins is not obvious, due to the lack of the basic region found in the original bZIP DNA-binding domains. Similar to bZIP, ZIP forms homo- and heterodimers, resulting in many dimers that may have different effects on transcription.
Pssm-ID: 409276 Cd Length: 49 Bit Score: 103.41 E-value: 5.62e-27
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 737674573 669 AMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSNDQ 717
Cdd:cd21936 1 AMDLVKSHLMFAVREEVDVLKEQIAELEERISQLERENSLLRSNAPPEV 49
|
|
| ZIP_TSC22D1 |
cd21938 |
leucine zipper domain found in TSC22 domain family protein 1; TSC22 domain family protein 1 ... |
665-735 |
7.62e-25 |
|
leucine zipper domain found in TSC22 domain family protein 1; TSC22 domain family protein 1 (TSC22D1) is also called cerebral protein 2, regulatory protein TSC-22, TGFB-stimulated clone 22, or transforming growth factor beta-1-induced transcript 4 protein (TGFB1I4). It is a transcriptional repressor that was reported to be present in both the cytoplasmic and the nuclear fraction. It is activated by transcription growth factor-beta1 and other growth factors of osteoblastic cells. TSC22D1 acts on the C-type natriuretic peptide (CNP) promoter. It enhances c-Myc-mediated activation of the telomerase reverse transcriptase (TERT) promoter. This model corresponds to the conserved leucine zipper (ZIP) domain located at the C-terminus of TSC22D1. Its first helix is not basic and does not contain the consensus sequence, NXX(A)(A)XX(C/S)R, found in most basic region/leucine zipper (bZIP) proteins. Thus, the DNA-binding capability of the ZIP domain is not obvious. Similar to bZIP, ZIP forms homo- and heterodimers, resulting in many dimers that may have different effects on transcription.
Pssm-ID: 409278 Cd Length: 79 Bit Score: 98.68 E-value: 7.62e-25
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 737674573 665 KIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSNDQLSQLPT--QQANPGSTSQQQ 735
Cdd:cd21938 1 KIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAqlQTGSPPSSSQPP 73
|
|
| ZIP_TSC22D3 |
cd21940 |
leucine zipper domain found in TSC22 domain family protein 3; TSC22 domain family protein 3 ... |
669-728 |
1.55e-23 |
|
leucine zipper domain found in TSC22 domain family protein 3; TSC22 domain family protein 3 (TSC22D3) is also called DSIP-immunoreactive peptide, protein DIP, delta sleep-inducing peptide immunoreactor, glucocorticoid-induced leucine zipper protein (GILZ), TSC-22-like protein, or TSC-22-related protein (TSC-22R). It protects T-cells from IL2 deprivation-induced apoptosis through the inhibition of FOXO3A transcriptional activity that leads to the down-regulation of the pro-apoptotic factor BCL2L11. In macrophages, it plays a role in the anti-inflammatory and immunosuppressive effects of glucocorticoids and IL10. In T-cells, it inhibits anti-CD3-induced NFKB1 nuclear translocation. TSC22D3 contains a leucine zipper motif, a Pro/Glu rich domain, and three potential phosphorylation sites. This model corresponds to the leucine zipper (ZIP) domain. Its first helix is not basic and does not contain the consensus sequence, NXX(A)(A)XX(C/S)R, found in most basic region/leucine zipper (bZIP) proteins. Thus, the DNA-binding capability of the ZIP domain is not obvious. Similar to bZIP, ZIP forms homo- and heterodimers, resulting in many dimers that may have different effects on transcription.
Pssm-ID: 409280 Cd Length: 81 Bit Score: 95.02 E-value: 1.55e-23
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 737674573 669 AMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSNDQL----SQLPTQQANP 728
Cdd:cd21940 1 AMDLVKNHLMYAVREEVEVLKEQIKELVEKNSQLERENSLLKTLASPEQLekfqSRLPSEETAP 64
|
|
| ZIP_TSC22D-like |
cd21927 |
leucine zipper found in the TSC22 domain leucine zipper transcription factors, c-Myc-binding ... |
670-717 |
7.25e-18 |
|
leucine zipper found in the TSC22 domain leucine zipper transcription factors, c-Myc-binding protein, and similar proteins; The family includes TGF-beta-stimulated clone-22 domain (TSC22D) leucine zipper transcription factors, TSC22D1-4, as well as c-Myc-binding protein (MycBP). TSC22D proteins have diverse physiological functions, including cell growth, development, homeostasis, and immune regulation. MycBP, also called associate of Myc 1 (AMY-1), is a novel c-Myc binding protein that may control the transcriptional activity of Myc. It stimulates the activation of E box-dependent transcription by Myc. Members of this family contain a conserved leucine zipper (ZIP) domain. Its first helix is not basic and does not contain the consensus sequence, NXX(A)(A)XX(C/S)R, found in most basic region/leucine zipper (bZIP) proteins. In the bZIP family of transcription factors, the leucine zipper acts as a dimerization domain and the upstream basic region as a DNA-binding domain. However, DNA-binding capability of TSC22D family proteins is not obvious, due to the lack of the basic region found in the original bZIP DNA-binding domains. Similar to bZIP, ZIP forms homo- and heterodimers, resulting in many dimers that may have different effects on transcription.
Pssm-ID: 409275 Cd Length: 51 Bit Score: 77.94 E-value: 7.25e-18
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 737674573 670 MDLVKSHLMYAVREE--VEVLKEQIKELVERNSLLERENALLKSLSSNDQ 717
Cdd:cd21927 2 LDFLKHHLGAATPENpeIELLRLELAEMKEKYEAIVEENKKLKAKLAQYE 51
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
138-642 |
2.47e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 67.66 E-value: 2.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 138 QLAGSSAGPVTAAPSQPPTTCSSRFRVIKLDHGSGEPYRRgRWTCMEYYERDSDSSVLTRSGDCIRHSSTFDQTaeRDSG 217
Cdd:PHA03247 2611 PAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPE-RPRDDPAPGRVSRPRRARRLGRAAQASSPPQRP--RRRA 2687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 218 LGATGGSVVVVVASMQGAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQPqsfsvGQPQPPPPPVGGAVAQSSAPLPPFPG 297
Cdd:PHA03247 2688 ARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALP-----AAPAPPAVPAGPATPGGPARPARPPT 2762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 298 AATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQPSGQ 377
Cdd:PHA03247 2763 TAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPP 2842
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 378 SEYLQQHVAGLQPPSPAQPSSTGAAASPATAAtlPVGTGQNASSVGAQLMGASSQPSEAMAPRTGPAQGGQVAPCQPTGV 457
Cdd:PHA03247 2843 PGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAK--PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 458 PPATVGGVVQPCLGPAGAGQPQSVPPPQMGGSGPLSAVPGGPH--AVVPG---VPNVPAAVPAPSV--PSVSTTSVTMPN 530
Cdd:PHA03247 2921 PQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWlgALVPGrvaVPRFRVPQPAPSReaPASSTPPLTGHS 3000
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 531 VPAPLAQSQQLSSHT-PVSRSSSIIQHVGLPlAPGTHSAPTSLPQSDLSQFQTQTqplvgqvddtrrkSEPLPQPPLSLI 609
Cdd:PHA03247 3001 LSRVSSWASSLALHEeTDPPPVSLKQTLWPP-DDTEDSDADSLFDSDSERSDLEA-------------LDPLPPEPHDPF 3066
|
490 500 510
....*....|....*....|....*....|....
gi 737674573 610 AeNKPVVKPPVADSLANP-LQLTPMNSLATSVFS 642
Cdd:PHA03247 3067 A-HEPDPATPEAGARESPsSQFGPPPLSANAALS 3099
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
290-619 |
2.35e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 61.11 E-value: 2.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 290 APLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHL 369
Cdd:PHA03247 2574 APRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPR 2653
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 370 LPVQPSGQSeylqQHVAGLQPPSPAQPSSTGAAASPATAATlPVGTGQNASSVGAQLMGASSQP---SEAMAPRTGPAQG 446
Cdd:PHA03247 2654 DDPAPGRVS----RPRRARRLGRAAQASSPPQRPRRRAARP-TVGSLTSLADPPPPPPTPEPAPhalVSATPLPPGPAAA 2728
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 447 GQVAPCQP-TGVPPATVGGVVQPClGPAGAGQPQSVPPPQmgGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTTS 525
Cdd:PHA03247 2729 RQASPALPaAPAPPAVPAGPATPG-GPARPARPPTTAGPP--APAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA 2805
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 526 VTMPNVPAPLAQSQQLSSHTPVSRSSSIIQHVGLPLAPGTHSAPTSL-----PQSDLSQFQTQTQPLVGQVDDTRRKSEP 600
Cdd:PHA03247 2806 DPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLggsvaPGGDVRRRPPSRSPAAKPAAPARPPVRR 2885
|
330
....*....|....*....
gi 737674573 601 LPQPPLSLIAENKPVVKPP 619
Cdd:PHA03247 2886 LARPAVSRSTESFALPPDQ 2904
|
|
| Med15 |
pfam09606 |
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of ... |
222-596 |
6.60e-09 |
|
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.
Pssm-ID: 312941 [Multi-domain] Cd Length: 732 Bit Score: 59.25 E-value: 6.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 222 GGSVVVVVASMQGAHGPESGTDSSLTAVSQLPPsekMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPfpGAATG 301
Cdd:pfam09606 65 GGQGNGGMGGGQQGMPDPINALQNLAGQGTRPQ---MMGPMGPGPGGPMGQQMGGPGTASNLLASLGRPQMPM--GGAGF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 302 PQPMMAAaqpsqpQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQ----QPQQFAYPQPQIP-----PGHLLPV 372
Cdd:pfam09606 140 PSQMSRV------GRMQPGGQAGGMMQPSSGQPGSGTPNQMGPNGGPGQGQaggmNGGQQGPMGGQMPpqmgvPGMPGPA 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 373 QPSGQSEYLQQHVAGLQPPSPAQPSSTGAAASPATAAtlpvGTGQNASSVGAQLMGASSQPSEAMAPRTGPAQGGQVAPC 452
Cdd:pfam09606 214 DAGAQMGQQAQANGGMNPQQMGGAPNQVAMQQQQPQQ----QGQQSQLGMGINQMQQMPQGVGGGAGQGGPGQPMGPPGQ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 453 QPTGVPPATVGGV--------VQPCLGPAGAGQPQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTT 524
Cdd:pfam09606 290 QPGAMPNVMSIGDqnnyqqqqTRQQQQQQGGNHPAAHQQQMNQSVGQGGQVVALGGLNHLETWNPGNFGGLGANPMQRGQ 369
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 737674573 525 SVTMPNvPAPLAQSQQLSSHTPVSRSSSIIQHVGLPLAPGTHSAPTSLPQSDLS-QFQTQTQPLVGQVDDTRR 596
Cdd:pfam09606 370 PGMMSS-PSPVPGQQVRQVTPNQFMRQSPQPSVPSPQGPGSQPPQSHPGGMIPSpALIPSPSPQMSQQPAQQR 441
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
239-586 |
1.54e-08 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 58.24 E-value: 1.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 239 ESGTDSSLTA--VSQLPPSEKMSQPTPAQPQsfsvgqpqppppPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQG 316
Cdd:pfam03154 155 ESDSDSSAQQqiLQTQPPVLQAQSGAASPPS------------PPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQ 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 317 AGPGGQTLPPTNVTLAQPAMslpPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQPSGQSeyLQQHVAGLQPPSPAQP 396
Cdd:pfam03154 223 STAAPHTLIQQTPTLHPQRL---PSPHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMPPMPHS--LQTGPSHMQHPVPPQP 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 397 SSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPRTGPAQGGQVA-------PCQPTGVPPATVGGVVQPC 469
Cdd:pfam03154 298 FPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSmphikppPTTPIPQLPNPQSHKHPPH 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 470 L-GPAGAGQPQSVPPPQmgGSGPLSAVPGG--PHAVVPGVPNVPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTP 546
Cdd:pfam03154 378 LsGPSPFQMNSNLPPPP--ALKPLSSLSTHhpPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQ 455
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 737674573 547 VSRSSSIIQHVGLPLAPGTHSAPTSLPQSDLSQFQTQTQP 586
Cdd:pfam03154 456 VPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPP 495
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
249-625 |
8.78e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.10 E-value: 8.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 249 VSQLPPSEKMSQPTPAQPQSFSVGQPQppPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTN 328
Cdd:PHA03247 2479 VYRRPAEARFPFAAGAAPDPGGGGPPD--PDAPPAPSRLAPAILPDEPVGEPVHPRMLTWIRGLEELASDDAGDPPPPLP 2556
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 329 VTLAQPAMSL---PPQPGPAVGAPAAQQPQQfaypQPQIPPGHLLPVQPSGQSEylqqHVAGLQPPSPAQPSSTGAAASP 405
Cdd:PHA03247 2557 PAAPPAAPDRsvpPPRPAPRPSEPAVTSRAR----RPDAPPQSARPRAPVDDRG----DPRGPAPPSPLPPDTHAPDPPP 2628
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 406 ATAATLP--VGTGQNASSVGAQLMGASSQPSEAMAPRTGPAQGGQVAPCQPTGVP-----PATVGGVVQPCLGPAGAGQP 478
Cdd:PHA03247 2629 PSPSPAAnePDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPrrraaRPTVGSLTSLADPPPPPPTP 2708
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 479 QSVPPPQMGGSgPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTPVSR-SSSIIQHV 557
Cdd:PHA03247 2709 EPAPHALVSAT-PLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGpPRRLTRPA 2787
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 737674573 558 GLPLAPGTHSAPTSlpqSDLSQFQTQTQPLVGQVDDTRRKSEPLPqPPLSLIAENKPVVKPPVADSLA 625
Cdd:PHA03247 2788 VASLSESRESLPSP---WDPADPPAAVLAPAAALPPAASPAGPLP-PPTSAQPTAPPPPPGPPPPSLP 2851
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
289-677 |
2.14e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.14 E-value: 2.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 289 SAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAP---AAQQPQQFAYPQPQIP 365
Cdd:PRK07764 388 AGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNApagGAPSPPPAAAPSAQPA 467
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 366 PGHLLPVQPSGQSEYlQQHVAGLQPPSPAQPSSTGAAASPATAATLP------VGTGQNASSVGAQLMGASSQ------- 432
Cdd:PRK07764 468 PAPAAAPEPTAAPAP-APPAAPAPAAAPAAPAAPAAPAGADDAATLRerwpeiLAAVPKRSRKTWAILLPEATvlgvrgd 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 433 ------PSEAMAPR---------------------------TGPAQGGQVAPCQPTGVPPATVGGVVQPCLGPAGAGQPQ 479
Cdd:PRK07764 547 tlvlgfSTGGLARRfaspgnaevlvtalaeelggdwqveavVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAA 626
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 480 SVPPPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTPVSRSSSIiqhvgl 559
Cdd:PRK07764 627 PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQ------ 700
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 560 PLAPGTHSAPTSLPQSDLSQFQTQTQPlVGQVDDTRRKSEPLPQPPLSLIAENKPVVKPPVADSLANPLQLTPmnslATS 639
Cdd:PRK07764 701 PAPAPAATPPAGQADDPAAQPPQAAQG-ASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAA----APP 775
|
410 420 430
....*....|....*....|....*....|....*...
gi 737674573 640 VFSIAIPVDGDEDSASGGGVVAIDNKIEQAMDLVKSHL 677
Cdd:PRK07764 776 PSPPSEEEEMAEDDAPSMDDEDRRDAEEVAMELLEEEL 813
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
213-605 |
3.30e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 50.75 E-value: 3.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 213 ERDSGLGATGGSVVVVVASMQGAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPL 292
Cdd:PRK07764 382 ERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAA 461
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 293 PPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTnvtlaqpamslPPQPGPAVGAPAAQQPQQfAYPQ----------- 361
Cdd:PRK07764 462 PSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAA-----------PAAPAAPAGADDAATLRE-RWPEilaavpkrsrk 529
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 362 -PQIPPGHLLPVQPSGQSEYLQQHVAGLQPPSPAQPSSTGAAASPATAATLPV-------GTGQNASSVGAQLMGASSQP 433
Cdd:PRK07764 530 tWAILLPEATVLGVRGDTLVLGFSTGGLARRFASPGNAEVLVTALAEELGGDWqveavvgPAPGAAGGEGPPAPASSGPP 609
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 434 SEAMAPRTGPAQGGQVAPCQPTGVPPATVGGVVQPCLGPAGAGQPQSVPPPQMGGSGPLSAVPGGPHAVV-PGVPNVPAA 512
Cdd:PRK07764 610 EEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAaPPPAPAPAA 689
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 513 VPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTPVSRSSSIIQHVGLPLAPgTHSAPTSLPQSDLSQFQTQTQPLVGQVD 592
Cdd:PRK07764 690 PAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVP-LPPEPDDPPDPAGAPAQPPPPPAPAPAA 768
|
410
....*....|...
gi 737674573 593 DTRRKSEPLPQPP 605
Cdd:PRK07764 769 APAAAPPPSPPSE 781
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
306-603 |
7.08e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.49 E-value: 7.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 306 MAAAQPSQpqgagPGGQTLPPTnvtlaqPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPghllpvqpsgqseylqqhv 385
Cdd:PRK12323 360 MLAFRPGQ-----SGGGAGPAT------AAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAA------------------- 409
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 386 aglqPPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAqlmGASSQPSEAMAPRTGPAQGGQVAPCQPTGVPPATVGGV 465
Cdd:PRK12323 410 ----PAAAAAARAVAAAPARRSPAPEALAAARQASARGP---GGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPAR 482
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 466 VQPCLGPAGAGQ---PQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNvPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLS 542
Cdd:PRK12323 483 AAPAAAPAPADDdppPWEELPPEFASPAPAQPDAAPAGWVAESIPD-PATADPDDAFETLAPAPAAAPAPRAAAATEPVV 561
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 737674573 543 SHTPVSRSSSIIQHVglpLAPGTHSAPTSLPQSDLSQFQTQTQPLVGQVDDTRRKSEPLPQ 603
Cdd:PRK12323 562 APRPPRASASGLPDM---FDGDWPALAARLPVRGLAQQLARQSELAGVEGDTVRLRVPVPA 619
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
253-445 |
1.00e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.21 E-value: 1.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 253 PPSEKMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLA 332
Cdd:PRK07764 602 APASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAP 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 333 QPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQPSGQSEYLQQHVAGLQPPSPAQPSSTGAAASPATAATLP 412
Cdd:PRK07764 682 PPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPP 761
|
170 180 190
....*....|....*....|....*....|...
gi 737674573 413 VGTGQNASSVGAQLMGASSQPSEAMAPRTGPAQ 445
Cdd:PRK07764 762 PAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMD 794
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
289-484 |
2.94e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 47.77 E-value: 2.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 289 SAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPptnvtlAQPAMSLPPQPGPAVGAPA-AQQPQQFAyPQPQIPPg 367
Cdd:PRK10263 317 TEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPP------AQPTVAWQPVPGPQTGEPViAPAPEGYP-QQSQYAQ- 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 368 hllpvQPSGQSEYLQQhvaglqppsPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPRTGPAQGG 447
Cdd:PRK10263 389 -----PAVQYNEPLQQ---------PVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQS 454
|
170 180 190
....*....|....*....|....*....|....*..
gi 737674573 448 QVAPcQPTGVPPATvggVVQPCLGPAGAGQPQSVPPP 484
Cdd:PRK10263 455 TFAP-QSTYQTEQT---YQQPAAQEPLYQQPQPVEQQ 487
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
238-432 |
3.54e-05 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 47.34 E-value: 3.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 238 PESGTDSSLTAVSQLPPSEKM-----------SQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPfpgaatgPQPMM 306
Cdd:pfam09770 173 PAPAPQPAAQPASLPAPSRKMmsleeveaamrAQAKKPAQQPAPAPAQPPAAPPAQQAQQQQQFPPQI-------QQQQQ 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 307 AAAQPSQPQGagPGGQTLPPTNVTLAQpamSLPPQPGPAVGAPAAQQPQQFAYPQPQiPPGHLLPvQPSGQSEYLQQHVA 386
Cdd:pfam09770 246 PQQQPQQPQQ--HPGQGHPVTILQRPQ---SPQPDPAQPSIQPQAQQFHQQPPPVPV-QPTQILQ-NPNRLSAARVGYPQ 318
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 737674573 387 GLQPPSPAQPSSTGAAASPATAATLPVGTGQnassvgAQLMGASSQ 432
Cdd:pfam09770 319 NPQPGVQPAPAHQAHRQQGSFGRQAPIITHP------QQLAQLSEE 358
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
240-460 |
5.07e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.79 E-value: 5.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 240 SGTDSSLTAVSQLPpsekMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQGAGP 319
Cdd:PRK12323 368 SGGGAGPATAAAAP----VAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARG 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 320 GGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAA-------QQPQQFAYPQPQ-IPPGHLLPVQPSgqseylqqhVAGLQPP 391
Cdd:PRK12323 444 PGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAaaaaparAAPAAAPAPADDdPPPWEELPPEFA---------SPAPAQP 514
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 737674573 392 SPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPRTGPAQGGQVAPCQPTGVPPA 460
Cdd:PRK12323 515 DAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPA 583
|
|
| ZIP_MycBP-like |
cd21937 |
leucine zipper domain found in c-Myc-binding protein and similar proteins; MycBP, also called ... |
669-721 |
5.48e-05 |
|
leucine zipper domain found in c-Myc-binding protein and similar proteins; MycBP, also called associate of Myc 1 (AMY-1), is a novel c-Myc binding protein that may control the transcriptional activity of Myc. It stimulates the activation of E box-dependent transcription by Myc. This model corresponds to the conserved region that shows high sequence similarity with the leucine zipper (ZIP) domain located at the C-terminus of TGF-beta-stimulated clone-22 domain (TSC22D) family transcription factors. The first helix of ZIP is not basic and does not contain the consensus sequence, NXX(A)(A)XX(C/S)R, found in most basic region/leucine zipper (bZIP) proteins. Thus, the DNA-binding capability of the ZIP domain is not obvious. Similar to bZIP, ZIP forms homo- and heterodimers, resulting in many dimers that may have different effects on transcription.
Pssm-ID: 409277 [Multi-domain] Cd Length: 53 Bit Score: 41.38 E-value: 5.48e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 737674573 669 AMDLVKSHL--MYAVREEVEVLKEQIKELVERNSLLERENALLKSlssndQLSQL 721
Cdd:cd21937 3 ALDFIKQHLgaPGPEDADVEALRLENEELKQKNEELEEENKELKA-----KLQQY 52
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
289-534 |
5.74e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.62 E-value: 5.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 289 SAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPtnvTLAQPAMSLPPQPGPAVGAPAAQQPQQFAYPqPQIPPGH 368
Cdd:PRK10263 334 AAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEP---VIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQ-PQQPYYA 409
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 369 LLPVQPSGQSEYLQQHVAGLQPPSPA-QPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPRTGPaqgg 447
Cdd:PRK10263 410 PAAEQPAQQPYYAPAPEQPAQQPYYApAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVE---- 485
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 448 qvapcQPTGVPPATVGGVVQPCLGPAG----------------AGQPQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNVPA 511
Cdd:PRK10263 486 -----QQPVVEPEPVVEETKPARPPLYyfeeveekrarereqlAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAA 560
|
250 260
....*....|....*....|....
gi 737674573 512 AVP-APSVPSVSTTSVTMPNVPAP 534
Cdd:PRK10263 561 VSPlASGVKKATLATGAAATVAAP 584
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
321-648 |
2.01e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 2.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 321 GQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQPSGQS-------------EYLQQHVAG 387
Cdd:PHA03247 2471 GELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPvhprmltwirgleELASDDAGD 2550
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 388 LQPPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAQlMGASSQPSEAMAPRTGPaqGGQVAPCQPTGVPPATVGGVVQ 467
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARR-PDAPPQSARPRAPVDDR--GDPRGPAPPSPLPPDTHAPDPP 2627
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 468 PCLGPAGAGQPQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTPV 547
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPT 2707
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 548 SRSSSIIQHVGLPLAPGTHSAPTSLPQSDLSQFQTQT-QPLVGQVDDTRRKSEPLPQPPLSLIAENKPVVKPPVAdslan 626
Cdd:PHA03247 2708 PEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVpAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR----- 2782
|
330 340
....*....|....*....|..
gi 737674573 627 pLQLTPMNSLATSVFSIAIPVD 648
Cdd:PHA03247 2783 -LTRPAVASLSESRESLPSPWD 2803
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
295-540 |
3.10e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.46 E-value: 3.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 295 FPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLAQPAMslPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQP 374
Cdd:PRK07003 358 FEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAV--TAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPAT 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 375 SGQSEylqqhvAGLQPPSPAQPSSTGAAASPATAATLPvgtGQNASSVGAQLMGASSQPSEAMAPRTGPAqgGQVAPCQP 454
Cdd:PRK07003 436 ADRGD------DAADGDAPVPAKANARASADSRCDERD---AQPPADSGSASAPASDAPPDAAFEPAPRA--AAPSAATP 504
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 455 TGVPPATVGGVVQPCLGPAGAGQPQSVPPPQMGGSGPLSAVPGGPHAVV------------------PGVPNVPAAVPAP 516
Cdd:PRK07003 505 AAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALdvlrnagmrvssdrgaraAAAAKPAAAPAAA 584
|
250 260
....*....|....*....|....
gi 737674573 517 SVPSVSTTSVTMPNVPAPLAQSQQ 540
Cdd:PRK07003 585 PKPAAPRVAVQVPTPRARAATGDA 608
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
306-550 |
3.55e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 3.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 306 MAAAQPSQPQGAGPGGQTlpptnvtlaqpamslPPQPGPAVGAPAAQQPQqfaypqpqippghllpvqpsgqseylqqhV 385
Cdd:PRK07003 355 MLAFEPAVTGGGAPGGGV---------------PARVAGAVPAPGARAAA-----------------------------A 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 386 AGLQPPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPRTGPAQGGQVAPCQPTGVPPATvggV 465
Cdd:PRK07003 391 VGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDER---D 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 466 VQPCLGPA-GAGQPQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSvsttsvtMPNVPAPLAQSQQLSSH 544
Cdd:PRK07003 468 AQPPADSGsASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPA-------AAAPPAPEARPPTPAAA 540
|
....*.
gi 737674573 545 TPVSRS 550
Cdd:PRK07003 541 APAARA 546
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
438-627 |
3.58e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 3.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 438 APRTGPAQGGQVAPCQPTGVPPAtvggvvqpclGPAGAGQPQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPS 517
Cdd:PRK07003 361 AVTGGGAPGGGVPARVAGAVPAP----------GARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 518 VPSVSTTSVTMPNVPAPLAQSQQLSSHTPVSRSSSiiqhvgLPLAPGTHSAPTSLPQSDLSQFQT-QTQPLVGQVDDTRR 596
Cdd:PRK07003 431 APPATADRGDDAADGDAPVPAKANARASADSRCDE------RDAQPPADSGSASAPASDAPPDAAfEPAPRAAAPSAATP 504
|
170 180 190
....*....|....*....|....*....|.
gi 737674573 597 KSEPLPQPPLSLIAENKPVVKPPVADSLANP 627
Cdd:PRK07003 505 AAVPDARAPAAASREDAPAAAAPPAPEARPP 535
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
232-356 |
5.66e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 43.23 E-value: 5.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 232 MQGAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQPQSfsVGQPQPPPPPVGGAVAQSSAPlPPFPGAATGPQPM---MAA 308
Cdd:PRK14971 357 IQLAQLTQKGDDASGGRGPKQHIKPVFTQPAAAPQPS--AAAAASPSPSQSSAAAQPSAP-QSATQPAGTPPTVsvdPPA 433
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 737674573 309 AQPSQPQGAGPgGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQPQQ 356
Cdd:PRK14971 434 AVPVNPPSTAP-QAVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQ 480
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
297-605 |
6.18e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 6.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 297 GAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQPQQfAYPQPQIPPGHLLPVQPSG 376
Cdd:PRK07764 365 PSASDDERGLLARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPA-PAAAPQPAPAPAPAPAPPS 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 377 QSEYLQQHVAGLQPPSPAQPSStgaaaspataatlPVGTGQNASSVGAQlmgASSQPSEAMAPRTGPAQGGQVAPCQPTG 456
Cdd:PRK07764 444 PAGNAPAGGAPSPPPAAAPSAQ-------------PAPAPAAAPEPTAA---PAPAPPAAPAPAAAPAAPAAPAAPAGAD 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 457 ---------------------------VPPATVGGVVQPCL--------------------------------------- 470
Cdd:PRK07764 508 daatlrerwpeilaavpkrsrktwailLPEATVLGVRGDTLvlgfstgglarrfaspgnaevlvtalaeelggdwqveav 587
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 471 --GPAGAGQPQSVPPPQMGGSGPLSAVPGGP-HAVVPGVPNVPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTPV 547
Cdd:PRK07764 588 vgPAPGAAGGEGPPAPASSGPPEEAARPAAPaAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGD 667
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 737674573 548 SRSSSIIQHVGLPLAPGTHSAPtslPQSDLSQFQTQTQPLVGQVDDTRRKSEPLPQPP 605
Cdd:PRK07764 668 GWPAKAGGAAPAAPPPAPAPAA---PAAPAGAAPAQPAPAPAATPPAGQADDPAAQPP 722
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
209-366 |
6.90e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 6.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 209 DQTAERDSGLGATGGSVVVVVASMQGAHGPESGTDSSLTaVSQLPPSEKMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQS 288
Cdd:PRK07764 627 PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDG-GDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAP 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 289 SAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPT---NVTLAQPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIP 365
Cdd:PRK07764 706 AATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEpddPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEM 785
|
.
gi 737674573 366 P 366
Cdd:PRK07764 786 A 786
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
287-543 |
9.88e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 9.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 287 QSSAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPtnvtlAQPAMSLPPQPGPAVGAPAAQQ-PQQFAYPQPQIP 365
Cdd:PRK07003 385 ARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAE-----APPAAPAPPATADRGDDAADGDaPVPAKANARASA 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 366 PGHLLPVQPSGQSEYLQQhvAGLQPPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAmAPRTGPAQ 445
Cdd:PRK07003 460 DSRCDERDAQPPADSGSA--SAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPP-APEARPPT 536
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 446 GGQVApcqptgvPPATVGGVVQPCLGPAGAGQPQSVPPPQMGGSGPLSAVPgGPHAVVPGVPNVPAAVPAPSVPSVSTTS 525
Cdd:PRK07003 537 PAAAA-------PAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAA-PAAAPKPAAPRVAVQVPTPRARAATGDA 608
|
250
....*....|....*...
gi 737674573 526 VTMPNVPAPLAQSQQLSS 543
Cdd:PRK07003 609 PPNGAARAEQAAESRGAP 626
|
|
| PABP-1234 |
TIGR01628 |
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
296-378 |
1.18e-03 |
|
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range.
Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 42.10 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 296 PGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTL---------AQPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPP 366
Cdd:TIGR01628 405 PQQQFNGQPLGWPRMSMMPTPMGPGGPLRPNGLAPMnavrapsrnAQNAAQKPPMQPVMYPPNYQSLPLSQDLPQPQSTA 484
|
90
....*....|..
gi 737674573 367 GHLLPVQPSGQS 378
Cdd:TIGR01628 485 SQGGQNKKLAQV 496
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
251-396 |
1.64e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 41.99 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 251 QLPPSEKMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQ----PQGAGPGGQTLPP 326
Cdd:PRK10263 728 EFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQyqqpQQPVAPQPQYQQP 807
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 737674573 327 TNVTLAQPAMSLPPQPgpAVGAPAAQQPQQFAYPQPQIPPGHLLPVQpSGQSEYLQQHVAGL-------QPPSPAQP 396
Cdd:PRK10263 808 QQPVAPQPQYQQPQQP--VAPQPQYQQPQQPVAPQPQDTLLHPLLMR-NGDSRPLHKPTTPLpsldlltPPPSEVEP 881
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
429-586 |
1.65e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.62 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 429 ASSQPSEAMAPRTGPAQGGQVAPCqPTGVPPATVGGVVQPclGPAGAGQPQSVPPPqmggsgplsavpggphAVVPGVPN 508
Cdd:PRK14951 367 AAAAEAAAPAEKKTPARPEAAAPA-AAPVAQAAAAPAPAA--APAAAASAPAAPPA----------------AAPPAPVA 427
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 737674573 509 VPAAVPAPSVPSVSTTSVTMPnvPAPLAQSQQLSSHTPVsRSSSIIQHVGLPLAPGTHSAPTSLPQSDLSQFQTQTQP 586
Cdd:PRK14951 428 APAAAAPAAAPAAAPAAVALA--PAPPAQAAPETVAIPV-RVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWHATVQ 502
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
311-520 |
1.79e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 311 PSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQPqqfaypqPQIPPGHLLPVQPSGQSEYLQQHVAGLQP 390
Cdd:PHA03378 673 PYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQR-------PAAATGRARPPAAAPGRARPPAAAPGRAR 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 391 PSPAQPSSTGAAASPATAATLPVGT-GQNASSVGAQLMGASSQPSEAMAPRTGPAQGG----QVAPCQPTGVPPATVGGV 465
Cdd:PHA03378 746 PPAAAPGRARPPAAAPGRARPPAAApGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGptsmQLMPRAAPGQQGPTKQIL 825
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 737674573 466 VQPCLGPAGAGQPQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPS 520
Cdd:PHA03378 826 RQLLTGGVKRGRPSLKKPAALERQAAAGPTPSPGSGTSDKIVQAPVFYPPVLQPI 880
|
|
| PRK13169 |
PRK13169 |
DNA replication initiation control protein YabA; |
683-735 |
2.68e-03 |
|
DNA replication initiation control protein YabA;
Pssm-ID: 183876 Cd Length: 110 Bit Score: 38.30 E-value: 2.68e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 737674573 683 EEVEVLKEQIKELVERNSLLERENALLKslssnDQLSQLpTQQANPGSTSQQQ 735
Cdd:PRK13169 22 KELGALKKQLAELLEENTALRLENDKLR-----ERLEEL-EAEEPAKEKKKKE 68
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
294-499 |
2.69e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.21 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 294 PFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQPQQFA---YPQPQIPPGHLL 370
Cdd:PHA03378 696 PPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAApgrARPPAAAPGAPT 775
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 371 PVQPSGQSEYLQQHVAGlqPPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPrtgPAQGGQVA 450
Cdd:PHA03378 776 PQPPPQAPPAPQQRPRG--APTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKK---PAALERQA 850
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 737674573 451 PCQPTGVPPATVGG-VVQPCLGPAGAGQPQSVpPPQMGGSGPL--SAVPGGP 499
Cdd:PHA03378 851 AAGPTPSPGSGTSDkIVQAPVFYPPVLQPIQV-MRQLGSVRAAaaSTVTQAP 901
|
|
| ZapB |
pfam06005 |
Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is ... |
683-725 |
3.11e-03 |
|
Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation.
Pssm-ID: 428718 [Multi-domain] Cd Length: 71 Bit Score: 36.86 E-value: 3.11e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 737674573 683 EEVEVLKEQIKELVERNSLLERENALLKslSSNDQLSQLPTQQ 725
Cdd:pfam06005 18 DTIALLQMENEELKEENEELKEEANELE--EENQQLKQERNQW 58
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
296-639 |
3.72e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.82 E-value: 3.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 296 PGAATGPQPMmaaAQPSQPQGaGPGGQTLPPTNVTLAQPAMSLPPQPGPavgaPAAQQPQQFAypqpqiPPGHLLPVQPS 375
Cdd:PHA03378 590 PSYAQTPWPV---PHPSQTPE-PPTTQSHIPETSAPRQWPMPLRPIPMR----PLRMQPITFN------VLVFPTPHQPP 655
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 376 GQSEYLQQHVAGLQPPSPAQPSstgaaaspataatlpvgTGQNASSVGAQLMGASSQPSEAMAPRTGPAQGGQVAPCQPT 455
Cdd:PHA03378 656 QVEITPYKPTWTQIGHIPYQPS-----------------PTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPA 718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 456 GVPPATVGGVVQPCLGPAGAGQPQSVPPPQM--GGSGPLSAVPGgPHAVVPGVPNVPAAVPAPSVPsvsttsvtmpnvPA 533
Cdd:PHA03378 719 AATGRARPPAAAPGRARPPAAAPGRARPPAAapGRARPPAAAPG-RARPPAAAPGAPTPQPPPQAP------------PA 785
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 534 PLAQSQQLSSHTPVSRSSSIIQHVGLPLAPGTHSAPTSLPQSDLSQFQTQTQPLVGQVDDTRRKS----EPLPQPPLSLI 609
Cdd:PHA03378 786 PQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAaagpTPSPGSGTSDK 865
|
330 340 350
....*....|....*....|....*....|
gi 737674573 610 AENKPVVKPPVADSLANPLQLTPMNSLATS 639
Cdd:PHA03378 866 IVQAPVFYPPVLQPIQVMRQLGSVRAAAAS 895
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
475-648 |
5.32e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 40.23 E-value: 5.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 475 AGQPQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTPVSRSSSIi 554
Cdd:PRK07994 363 APLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKS- 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 555 qhvgLPLAPGThSAPTSLPQSDLSQFQTQTQPLVGQVDdtrrKSEPLPQPPLSLIAENKPVVKPPVAdsLANPLQLTPMN 634
Cdd:PRK07994 442 ----EPAAASR-ARPVNSALERLASVRPAPSALEKAPA----KKEAYRWKATNPVEVKKEPVATPKA--LKKALEHEKTP 510
|
170
....*....|....
gi 737674573 635 SLATSVFSIAIPVD 648
Cdd:PRK07994 511 ELAAKLAAEAIERD 524
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
261-485 |
6.09e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.05 E-value: 6.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 261 PTPAQPQSFSVGQPQPPPPPVGGAVAQSSAP--LPPFPGAATGPQPMMAAAQPSQPQGAGPGgqTLPPTNVTLAQPAMSL 338
Cdd:PHA03378 701 PTPMRPPAAPPGRAQRPAAATGRARPPAAAPgrARPPAAAPGRARPPAAAPGRARPPAAAPG--RARPPAAAPGAPTPQP 778
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 339 PPQPGPAvgapAAQQPQQFAYPQ--PQIPPG--HLLPVQPSGQSEYLQQHVAGLQPPSPAQPSSTGAAASPATAATLPVG 414
Cdd:PHA03378 779 PPQAPPA----PQQRPRGAPTPQppPQAGPTsmQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAAAGP 854
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 737674573 415 TGQNASSVGAQLMGASSQPSEAMAPRTGPAQGGQVAPCQPTGVPPATVGGVVQPCLGpaGAGQPQSVPPPQ 485
Cdd:PHA03378 855 TPSPGSGTSDKIVQAPVFYPPVLQPIQVMRQLGSVRAAAASTVTQAPTEYTGERRGV--GPMHPTDIPPSK 923
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
300-486 |
6.48e-03 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 40.02 E-value: 6.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 300 TGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTL--AQPAMSLPPQPgpavgapAAQQPQQFAYPQPQIPPGH--------- 368
Cdd:pfam09770 165 VAPKKAAAPAPAPQPAAQPASLPAPSRKMMSLeeVEAAMRAQAKK-------PAQQPAPAPAQPPAAPPAQqaqqqqqfp 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 369 ---LLPVQPSGQSEYLQQHVAGLQPPSPAQ-PSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPRTGpa 444
Cdd:pfam09770 238 pqiQQQQQPQQQPQQPQQHPGQGHPVTILQrPQSPQPDPAQPSIQPQAQQFHQQPPPVPVQPTQILQNPNRLSAARVG-- 315
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 737674573 445 qggqvAPCQPTGVPPATVGGVVQPCLGPAGAGQPQSVPPPQM 486
Cdd:pfam09770 316 -----YPQNPQPGVQPAPAHQAHRQQGSFGRQAPIITHPQQL 352
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
431-547 |
6.79e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 39.70 E-value: 6.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 737674573 431 SQPSEAMAPRTGPAQGGQVAPCQPTGVPPATVGGVVQPCLGPAGAGQPQSVPPPQMGGSGPLSAVPGGPHAVVPGvPNVP 510
Cdd:PRK14951 395 AQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPE-PAVA 473
|
90 100 110
....*....|....*....|....*....|....*..
gi 737674573 511 AAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTPV 547
Cdd:PRK14951 474 SAAPAPAAAPAAARLTPTEEGDVWHATVQQLAAAEAI 510
|
|
| |
