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Conserved domains on  [gi|663429573|ref|NP_001284649|]
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protein C1orf43 isoform 6 [Homo sapiens]

Protein Classification

NICE-3 domain-containing protein( domain architecture ID 10538405)

NICE-3 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NICE-3 pfam07406
NICE-3 protein; This family consists of several eukaryotic NICE-3 and related proteins. The ...
6-170 4.72e-86

NICE-3 protein; This family consists of several eukaryotic NICE-3 and related proteins. The gene coding for NICE-3 is part of the epidermal differentiation complex (EDC) which comprises a large number of genes that are of crucial importance for the maturation of the human epidermis. The function of NICE-3 is unknown.


:

Pssm-ID: 462157  Cd Length: 182  Bit Score: 252.95  E-value: 4.72e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663429573    6 NWLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRRGPHVPVGHNAPKDLKEEIDIRLSRVQDIKYEPQLLADDDAR 85
Cdd:pfam07406   1 NELSGVNVVLVIAYGSLTFILLFIFAKRQIMRFALKSRRGPHVPIGHGAPKSLKKEIERRLERVQKIRYEPRLLSPDDER 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663429573   86 LLQLETQGNQ--------------------KIPFH--SEGRHPrslmGKNFRSYLLDLRNtSTPFKGVRKALIDTLLDGY 143
Cdd:pfam07406  81 LTDLGSQGDHgsypylyrmkavdavrelesQIPFQdgDLGRHP----GENLRSYLLDLRN-SGPLKGCRSRLIHTLLDLY 155
                         170       180
                  ....*....|....*....|....*..
gi 663429573  144 ETARYGTGVFGQNEYLRYQEALSELAT 170
Cdd:pfam07406 156 EHARHGPEEFGEEEYLKYQELLNELAD 182
 
Name Accession Description Interval E-value
NICE-3 pfam07406
NICE-3 protein; This family consists of several eukaryotic NICE-3 and related proteins. The ...
6-170 4.72e-86

NICE-3 protein; This family consists of several eukaryotic NICE-3 and related proteins. The gene coding for NICE-3 is part of the epidermal differentiation complex (EDC) which comprises a large number of genes that are of crucial importance for the maturation of the human epidermis. The function of NICE-3 is unknown.


Pssm-ID: 462157  Cd Length: 182  Bit Score: 252.95  E-value: 4.72e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663429573    6 NWLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRRGPHVPVGHNAPKDLKEEIDIRLSRVQDIKYEPQLLADDDAR 85
Cdd:pfam07406   1 NELSGVNVVLVIAYGSLTFILLFIFAKRQIMRFALKSRRGPHVPIGHGAPKSLKKEIERRLERVQKIRYEPRLLSPDDER 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663429573   86 LLQLETQGNQ--------------------KIPFH--SEGRHPrslmGKNFRSYLLDLRNtSTPFKGVRKALIDTLLDGY 143
Cdd:pfam07406  81 LTDLGSQGDHgsypylyrmkavdavrelesQIPFQdgDLGRHP----GENLRSYLLDLRN-SGPLKGCRSRLIHTLLDLY 155
                         170       180
                  ....*....|....*....|....*..
gi 663429573  144 ETARYGTGVFGQNEYLRYQEALSELAT 170
Cdd:pfam07406 156 EHARHGPEEFGEEEYLKYQELLNELAD 182
 
Name Accession Description Interval E-value
NICE-3 pfam07406
NICE-3 protein; This family consists of several eukaryotic NICE-3 and related proteins. The ...
6-170 4.72e-86

NICE-3 protein; This family consists of several eukaryotic NICE-3 and related proteins. The gene coding for NICE-3 is part of the epidermal differentiation complex (EDC) which comprises a large number of genes that are of crucial importance for the maturation of the human epidermis. The function of NICE-3 is unknown.


Pssm-ID: 462157  Cd Length: 182  Bit Score: 252.95  E-value: 4.72e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663429573    6 NWLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRRGPHVPVGHNAPKDLKEEIDIRLSRVQDIKYEPQLLADDDAR 85
Cdd:pfam07406   1 NELSGVNVVLVIAYGSLTFILLFIFAKRQIMRFALKSRRGPHVPIGHGAPKSLKKEIERRLERVQKIRYEPRLLSPDDER 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663429573   86 LLQLETQGNQ--------------------KIPFH--SEGRHPrslmGKNFRSYLLDLRNtSTPFKGVRKALIDTLLDGY 143
Cdd:pfam07406  81 LTDLGSQGDHgsypylyrmkavdavrelesQIPFQdgDLGRHP----GENLRSYLLDLRN-SGPLKGCRSRLIHTLLDLY 155
                         170       180
                  ....*....|....*....|....*..
gi 663429573  144 ETARYGTGVFGQNEYLRYQEALSELAT 170
Cdd:pfam07406 156 EHARHGPEEFGEEEYLKYQELLNELAD 182
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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