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Conserved domains on  [gi|570359547|ref|NP_001275644|]
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catenin delta-2 isoform 2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 490-530 1.86e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 51.28  E-value: 1.86e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 570359547    490 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVY 530
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 534-575 6.98e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 6.98e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 570359547    534 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 575
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELL-KSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 794-829 9.27e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 9.27e-08
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 570359547    794 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 829
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 743-784 1.42e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


:

Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.83  E-value: 1.42e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 570359547   743 PPKGIQMLWHPSIVKPYLTLLSeCSNPDTLEGAAGALQNLAA 784
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 883-927 3.60e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 3.60e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 570359547    883 NMENAKALRDAGGIEKLVGISKSkgdkHSPKVVKAASQVLNSMWQ 927
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKS----EDEEVVKEAAWALSNLSS 41
PLN03200 super family cl33659
cellulose synthase-interactive protein; Provisional
 459-632 4.74e-03

cellulose synthase-interactive protein; Provisional


The actual alignment was detected with superfamily member PLN03200:

Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 41.24  E-value: 4.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  459 PELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNK 538
Cdd:PLN03200  147 PSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISK 226

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  539 IAlkNCGGIPALVRLLRKTTDLEIRELVTGVLWNLS--SCDALKMPIIQDALAVLTNAVIIPHSGWensplqddrkIQLH 616
Cdd:PLN03200  227 VL--DAGAVKQLLKLLGQGNEVSVRAEAAGALEALSsqSKEAKQAIADAGGIPALINATVAPSKEF----------MQGE 294

                         170
                  ....*....|....*..
gi 570359547  617 SSQVLR-NATGCLRNVS 632
Cdd:PLN03200  295 FAQALQeNAMGALANIC 311
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
 72-443 5.96e-03

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 40.92  E-value: 5.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547   72 EGSFQYPASYHSNQTLALGETTPSQLPARGTQARATGQSFSQGTTSRAGHLAGPEPAPPPPPPPREPFAPSLGSAFHLPD 151
Cdd:PHA03307   18 GEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  152 APPAAAAAALYYSSSTLPAPPRG---GSPLAAPQGGSPTKLQRGGS-APEGATYAAPRGSSPKQSPSRLAKSYSTSSPIN 227
Cdd:PHA03307   98 ASPAREGSPTPPGPSSPDPPPPTpppASPPPSPAPDLSEMLRPVGSpGPPPAASPPAAGASPAAVASDAASSRQAALPLS 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  228 IVVSSA-GLSPIRVTSPPTVQSTISSSPIHQLSSTIGTYATLSPTKRlvhASEQYSKHSQELYATATLQRPGSlAAGSRA 306
Cdd:PHA03307  178 SPEETArAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAP---GRSAADDAGASSSDSSSSESSGC-GWGPEN 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  307 SYSSQHGHLGPELRALQSPEHHIDPiyEDRVYQKPPMRSLSQSQGDPLPPAHTGTYRTSTAPSSPGVDSVP---LQRTGS 383
Cdd:PHA03307  254 ECPLPRPAPITLPTRIWEASGWNGP--SSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRessSSSTSS 331

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  384 QHGPQNAAAATFQRASYAAGPASNYADPYRQlqycpsveSPYSKSGPALPPEGTLARSPS 443
Cdd:PHA03307  332 SSESSRGAAVSPGPSPSRSPSPSRPPPPADP--------SSPRKRPRPSRAPSSPAASAG 383
 
Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 490-530 1.86e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 51.28  E-value: 1.86e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 570359547    490 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVY 530
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 534-575 6.98e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 6.98e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 570359547    534 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 575
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELL-KSEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 534-575 7.42e-08

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 49.38  E-value: 7.42e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 570359547   534 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 575
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 794-829 9.27e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 9.27e-08
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 570359547    794 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 829
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 490-529 7.42e-07

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 46.68  E-value: 7.42e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 570359547   490 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLV 529
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 743-784 1.42e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.83  E-value: 1.42e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 570359547   743 PPKGIQMLWHPSIVKPYLTLLSeCSNPDTLEGAAGALQNLAA 784
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 794-829 3.48e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.06  E-value: 3.48e-05
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 570359547   794 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 829
Cdd:pfam00514    5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 473-575 4.43e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 44.71  E-value: 4.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  473 PSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRmTEVHRSACGALRNLVYGKaNDDNKIALKNCGGIPALVR 552
Cdd:PLN03200  418 ADVQEELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLS-SEQQQEYAVALLAILTDE-VDESKWAITAAGGIPPLVQ 495

                          90       100
                  ....*....|....*....|...
gi 570359547  553 LLrKTTDLEIRELVTGVLWNLSS 575
Cdd:PLN03200  496 LL-ETGSQKAKEDSATVLWNLCC 517
HEAT COG1413
HEAT repeat [General function prediction only];
457-573 6.79e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 41.15  E-value: 6.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  457 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNlvygkand 535
Cdd:COG1413    44 GDPRaVPALLEALKDPDPEVRAAAAEAL-----------GRIGDPEAVPALIAALKDEDPEVRRAAAEALGR-------- 104

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 570359547  536 dnkiaLKNCGGIPALVRLLrKTTDLEIRELVTGVLWNL 573
Cdd:COG1413   105 -----LGDPAAVPALLEAL-KDPDWEVRRAAARALGRL 136
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 883-927 3.60e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 3.60e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 570359547    883 NMENAKALRDAGGIEKLVGISKSkgdkHSPKVVKAASQVLNSMWQ 927
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKS----EDEEVVKEAAWALSNLSS 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 459-632 4.74e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 41.24  E-value: 4.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  459 PELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNK 538
Cdd:PLN03200  147 PSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISK 226

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  539 IAlkNCGGIPALVRLLRKTTDLEIRELVTGVLWNLS--SCDALKMPIIQDALAVLTNAVIIPHSGWensplqddrkIQLH 616
Cdd:PLN03200  227 VL--DAGAVKQLLKLLGQGNEVSVRAEAAGALEALSsqSKEAKQAIADAGGIPALINATVAPSKEF----------MQGE 294

                         170
                  ....*....|....*..
gi 570359547  617 SSQVLR-NATGCLRNVS 632
Cdd:PLN03200  295 FAQALQeNAMGALANIC 311
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 72-443 5.96e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 40.92  E-value: 5.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547   72 EGSFQYPASYHSNQTLALGETTPSQLPARGTQARATGQSFSQGTTSRAGHLAGPEPAPPPPPPPREPFAPSLGSAFHLPD 151
Cdd:PHA03307   18 GEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  152 APPAAAAAALYYSSSTLPAPPRG---GSPLAAPQGGSPTKLQRGGS-APEGATYAAPRGSSPKQSPSRLAKSYSTSSPIN 227
Cdd:PHA03307   98 ASPAREGSPTPPGPSSPDPPPPTpppASPPPSPAPDLSEMLRPVGSpGPPPAASPPAAGASPAAVASDAASSRQAALPLS 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  228 IVVSSA-GLSPIRVTSPPTVQSTISSSPIHQLSSTIGTYATLSPTKRlvhASEQYSKHSQELYATATLQRPGSlAAGSRA 306
Cdd:PHA03307  178 SPEETArAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAP---GRSAADDAGASSSDSSSSESSGC-GWGPEN 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  307 SYSSQHGHLGPELRALQSPEHHIDPiyEDRVYQKPPMRSLSQSQGDPLPPAHTGTYRTSTAPSSPGVDSVP---LQRTGS 383
Cdd:PHA03307  254 ECPLPRPAPITLPTRIWEASGWNGP--SSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRessSSSTSS 331

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  384 QHGPQNAAAATFQRASYAAGPASNYADPYRQlqycpsveSPYSKSGPALPPEGTLARSPS 443
Cdd:PHA03307  332 SSESSRGAAVSPGPSPSRSPSPSRPPPPADP--------SSPRKRPRPSRAPSSPAASAG 383
 
Name Accession Description Interval E-value
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 490-530 1.86e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 51.28  E-value: 1.86e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 570359547    490 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVY 530
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 534-575 6.98e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 6.98e-08
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 570359547    534 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 575
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELL-KSEDEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 534-575 7.42e-08

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 49.38  E-value: 7.42e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 570359547   534 NDDNKIALKNCGGIPALVRLLrKTTDLEIRELVTGVLWNLSS 575
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 794-829 9.27e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 49.35  E-value: 9.27e-08
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 570359547    794 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 829
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 490-529 7.42e-07

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 46.68  E-value: 7.42e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 570359547   490 DNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLV 529
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 743-784 1.42e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.83  E-value: 1.42e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 570359547   743 PPKGIQMLWHPSIVKPYLTLLSeCSNPDTLEGAAGALQNLAA 784
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLS-SPDEEVQEEAAWALSNLAA 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 794-829 3.48e-05

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 42.06  E-value: 3.48e-05
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 570359547   794 RAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMA 829
Cdd:pfam00514    5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 473-575 4.43e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 44.71  E-value: 4.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  473 PSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRmTEVHRSACGALRNLVYGKaNDDNKIALKNCGGIPALVR 552
Cdd:PLN03200  418 ADVQEELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLS-SEQQQEYAVALLAILTDE-VDESKWAITAAGGIPPLVQ 495

                          90       100
                  ....*....|....*....|...
gi 570359547  553 LLrKTTDLEIRELVTGVLWNLSS 575
Cdd:PLN03200  496 LL-ETGSQKAKEDSATVLWNLCC 517
HEAT COG1413
HEAT repeat [General function prediction only];
457-573 6.79e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 41.15  E-value: 6.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  457 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNlvygkand 535
Cdd:COG1413    44 GDPRaVPALLEALKDPDPEVRAAAAEAL-----------GRIGDPEAVPALIAALKDEDPEVRRAAAEALGR-------- 104

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 570359547  536 dnkiaLKNCGGIPALVRLLrKTTDLEIRELVTGVLWNL 573
Cdd:COG1413   105 -----LGDPAAVPALLEAL-KDPDWEVRRAAARALGRL 136
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 883-927 3.60e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 3.60e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 570359547    883 NMENAKALRDAGGIEKLVGISKSkgdkHSPKVVKAASQVLNSMWQ 927
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKS----EDEEVVKEAAWALSNLSS 41
HEAT COG1413
HEAT repeat [General function prediction only];
457-588 3.62e-03

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 38.84  E-value: 3.62e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  457 RDPE-LPEVIQMLQHQFPSVQSNAAAYLqhlcfgdnkikAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKAnd 535
Cdd:COG1413    13 GDPAaVPALIAALADEDPDVRAAAARAL-----------GRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEA-- 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 570359547  536 dnkialkncggIPALVRLLrKTTDLEIRELVTGVLWNLSSCDALkmPIIQDAL 588
Cdd:COG1413    80 -----------VPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV--PALLEAL 118
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 459-632 4.74e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 41.24  E-value: 4.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  459 PELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKAEIRRQGGIQLLVDLLDHRMTEVHRSACGALRNLVYGKANDDNK 538
Cdd:PLN03200  147 PSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISK 226

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  539 IAlkNCGGIPALVRLLRKTTDLEIRELVTGVLWNLS--SCDALKMPIIQDALAVLTNAVIIPHSGWensplqddrkIQLH 616
Cdd:PLN03200  227 VL--DAGAVKQLLKLLGQGNEVSVRAEAAGALEALSsqSKEAKQAIADAGGIPALINATVAPSKEF----------MQGE 294

                         170
                  ....*....|....*..
gi 570359547  617 SSQVLR-NATGCLRNVS 632
Cdd:PLN03200  295 FAQALQeNAMGALANIC 311
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 72-443 5.96e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 40.92  E-value: 5.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547   72 EGSFQYPASYHSNQTLALGETTPSQLPARGTQARATGQSFSQGTTSRAGHLAGPEPAPPPPPPPREPFAPSLGSAFHLPD 151
Cdd:PHA03307   18 GEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAP 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  152 APPAAAAAALYYSSSTLPAPPRG---GSPLAAPQGGSPTKLQRGGS-APEGATYAAPRGSSPKQSPSRLAKSYSTSSPIN 227
Cdd:PHA03307   98 ASPAREGSPTPPGPSSPDPPPPTpppASPPPSPAPDLSEMLRPVGSpGPPPAASPPAAGASPAAVASDAASSRQAALPLS 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  228 IVVSSA-GLSPIRVTSPPTVQSTISSSPIHQLSSTIGTYATLSPTKRlvhASEQYSKHSQELYATATLQRPGSlAAGSRA 306
Cdd:PHA03307  178 SPEETArAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAP---GRSAADDAGASSSDSSSSESSGC-GWGPEN 253

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  307 SYSSQHGHLGPELRALQSPEHHIDPiyEDRVYQKPPMRSLSQSQGDPLPPAHTGTYRTSTAPSSPGVDSVP---LQRTGS 383
Cdd:PHA03307  254 ECPLPRPAPITLPTRIWEASGWNGP--SSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRessSSSTSS 331

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 570359547  384 QHGPQNAAAATFQRASYAAGPASNYADPYRQlqycpsveSPYSKSGPALPPEGTLARSPS 443
Cdd:PHA03307  332 SSESSRGAAVSPGPSPSRSPSPSRPPPPADP--------SSPRKRPRPSRAPSSPAASAG 383
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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