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Conserved domains on  [gi|568599844|ref|NP_001275540|]
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jupiter microtubule associated homolog 1 isoform 4 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
JUPITER super family cl25291
Microtubule-Associated protein Jupiter; Is a microtubule-associated protein that binds to all ...
 1-58 2.86e-06

Microtubule-Associated protein Jupiter; Is a microtubule-associated protein that binds to all microtubule populations in Drosophila.


The actual alignment was detected with superfamily member pfam17054:

Pssm-ID: 293659  Cd Length: 208  Bit Score: 44.27  E-value: 2.86e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 568599844    1 MTTTTTFKGVD--PNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEEN 58
Cdd:pfam17054   1 MAAYAAFKHVElyNVGKAKKRVLRAPGGGSSDIFGSDMPQTPRNVKNRMASNIFSAEKDN 60
 
Name Accession Description Interval E-value
JUPITER pfam17054
Microtubule-Associated protein Jupiter; Is a microtubule-associated protein that binds to all ...
 1-58 2.86e-06

Microtubule-Associated protein Jupiter; Is a microtubule-associated protein that binds to all microtubule populations in Drosophila.


Pssm-ID: 293659  Cd Length: 208  Bit Score: 44.27  E-value: 2.86e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 568599844    1 MTTTTTFKGVD--PNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEEN 58
Cdd:pfam17054   1 MAAYAAFKHVElyNVGKAKKRVLRAPGGGSSDIFGSDMPQTPRNVKNRMASNIFSAEKDN 60
 
Name Accession Description Interval E-value
JUPITER pfam17054
Microtubule-Associated protein Jupiter; Is a microtubule-associated protein that binds to all ...
 1-58 2.86e-06

Microtubule-Associated protein Jupiter; Is a microtubule-associated protein that binds to all microtubule populations in Drosophila.


Pssm-ID: 293659  Cd Length: 208  Bit Score: 44.27  E-value: 2.86e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 568599844    1 MTTTTTFKGVD--PNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEEN 58
Cdd:pfam17054   1 MAAYAAFKHVElyNVGKAKKRVLRAPGGGSSDIFGSDMPQTPRNVKNRMASNIFSAEKDN 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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