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Conserved domains on  [gi|442619872|ref|NP_001262719|]
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Xrp1, isoform G [Drosophila melanogaster]

Protein Classification

bZIP transcription factor( domain architecture ID 10199862)

basic leucine zipper (bZIP) transcription factor binds to the promoter regions of genes to control their expression

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
bZIP cd14686
Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and ...
599-640 5.64e-07

Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain; Basic leucine zipper (bZIP) factors comprise one of the most important classes of enhancer-type transcription factors. They act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes including cell survival, learning and memory, lipid metabolism, and cancer progression, among others. They also play important roles in responses to stimuli or stress signals such as cytokines, genotoxic agents, or physiological stresses. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


:

Pssm-ID: 269834 [Multi-domain]  Cd Length: 52  Bit Score: 46.77  E-value: 5.64e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 442619872 599 RLKNNEASRVSRRKTKVREEEEKRAEDTLLAENLRLRARADE 640
Cdd:cd14686    5 RERNREAARRSRERKKERIEELEEEVEELEEENEELKAELEE 46
 
Name Accession Description Interval E-value
bZIP cd14686
Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and ...
599-640 5.64e-07

Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain; Basic leucine zipper (bZIP) factors comprise one of the most important classes of enhancer-type transcription factors. They act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes including cell survival, learning and memory, lipid metabolism, and cancer progression, among others. They also play important roles in responses to stimuli or stress signals such as cytokines, genotoxic agents, or physiological stresses. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269834 [Multi-domain]  Cd Length: 52  Bit Score: 46.77  E-value: 5.64e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 442619872 599 RLKNNEASRVSRRKTKVREEEEKRAEDTLLAENLRLRARADE 640
Cdd:cd14686    5 RERNREAARRSRERKKERIEELEEEVEELEEENEELKAELEE 46
bZIP_2 pfam07716
Basic region leucine zipper;
594-646 6.73e-06

Basic region leucine zipper;


Pssm-ID: 462244 [Multi-domain]  Cd Length: 51  Bit Score: 43.74  E-value: 6.73e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 442619872  594 KAYQDRLKNNEASRVSRRKTKVREEE-EKRAEDtLLAENLRLRaraDEVASRER 646
Cdd:pfam07716   1 EYRDRRRKNNEAAKRSREKKKQKEEElEERVKE-LERENAQLR---QKVEQLEK 50
BRLZ smart00338
basic region leucin zipper;
589-654 3.27e-04

basic region leucin zipper;


Pssm-ID: 197664 [Multi-domain]  Cd Length: 65  Bit Score: 39.08  E-value: 3.27e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442619872   589 SEEERKAyQDRLKNNEASRVSRRKTKVREEE-EKRAEDtLLAENLRLRARADEVASRERKFKKYLME 654
Cdd:smart00338   1 EEDEKRR-RRRERNREAARRSRERKKAEIEElERKVEQ-LEAENERLKKEIERLRRELEKLKSELEE 65
PTZ00121 PTZ00121
MAEBL; Provisional
587-667 2.71e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 41.28  E-value: 2.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442619872  587 MKSEEERKAYQDRLKNNEASRVSRRKTKV-----REEEEKRAEDTLLAENLRLRARADEVASRERKFKKYLMERQRQKST 661
Cdd:PTZ00121 1607 MKAEEAKKAEEAKIKAEELKKAEEEKKKVeqlkkKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEED 1686

                  ....*.
gi 442619872  662 YVKQEQ 667
Cdd:PTZ00121 1687 EKKAAE 1692
 
Name Accession Description Interval E-value
bZIP cd14686
Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and ...
599-640 5.64e-07

Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain; Basic leucine zipper (bZIP) factors comprise one of the most important classes of enhancer-type transcription factors. They act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes including cell survival, learning and memory, lipid metabolism, and cancer progression, among others. They also play important roles in responses to stimuli or stress signals such as cytokines, genotoxic agents, or physiological stresses. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269834 [Multi-domain]  Cd Length: 52  Bit Score: 46.77  E-value: 5.64e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 442619872 599 RLKNNEASRVSRRKTKVREEEEKRAEDTLLAENLRLRARADE 640
Cdd:cd14686    5 RERNREAARRSRERKKERIEELEEEVEELEEENEELKAELEE 46
bZIP_BmCbz-like cd14813
Basic leucine zipper (bZIP) domain of Bombyx mori chorion b-ZIP transcription factor and ...
599-640 2.64e-06

Basic leucine zipper (bZIP) domain of Bombyx mori chorion b-ZIP transcription factor and similar bZIP domains; Bombyx mori chorion b-ZIP transcription factor, is encoded by the Cbz gene. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269875 [Multi-domain]  Cd Length: 52  Bit Score: 44.67  E-value: 2.64e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 442619872 599 RLKNNEASRVSRRKTKVREEE-EKRAEDtLLAENLRLRARADE 640
Cdd:cd14813    5 RDKNNEASRRSRLNRKQKEQEmQKEAEE-LERENEALKVKVEE 46
bZIP_2 pfam07716
Basic region leucine zipper;
594-646 6.73e-06

Basic region leucine zipper;


Pssm-ID: 462244 [Multi-domain]  Cd Length: 51  Bit Score: 43.74  E-value: 6.73e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 442619872  594 KAYQDRLKNNEASRVSRRKTKVREEE-EKRAEDtLLAENLRLRaraDEVASRER 646
Cdd:pfam07716   1 EYRDRRRKNNEAAKRSREKKKQKEEElEERVKE-LERENAQLR---QKVEQLEK 50
bZIP_CEBP cd14693
Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein (CEBP) and similar ...
589-637 6.70e-05

Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein (CEBP) and similar proteins: a DNA-binding and dimerization domain; CEBPs (or C/EBPs) are Basic leucine zipper (bZIP) transcription factors that regulate the cell cycle, differentiation, growth, survival, energy metabolism, innate and adaptive immunity, and inflammation, among others. They are also associated with cancer and viral disease. There are six CEBP proteins in mammalian cells including CEBPA (alpha), CEBPB (beta), CEBPG (gamma), CEBPD (delta), and CEBPE (epsilon), which all contain highly conserved bZIP domains at their C-termini and variations at their N-terminal regions. Each possesses unique properties to regulate cell type-specific growth and differentiation. The sixth isoform, CEBPZ (zeta), lacks an intact DNA-binding domain and is excluded from this subfamily. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269841 [Multi-domain]  Cd Length: 60  Bit Score: 41.00  E-value: 6.70e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 442619872 589 SEEERkayQDRLKNNEASRVSRRKTKVREEEEKRAEDTLLAENLRLRAR 637
Cdd:cd14693    2 SEEYR---QKRERNNIAVRKSREKAKQRQLETQQKVQELRKENERLQKR 47
bZIP_HLF cd14695
Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a ...
594-636 2.37e-04

Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain; HLF, also called vitellogenin gene-binding protein (VBP) in birds, is a circadian clock-controlled Basic leucine zipper (bZIP) transcription factor which is a direct transcriptional target of CLOCK/BMAL1. It is implicated, together with bZIPs DBP and TEF, in the regulation of genes involved in the metabolism of endobiotic and xenobiotic agents. Triple knockout mice display signs of early aging and suffer premature death, likely due to impaired defense against xenobiotic stress. A leukemogenic translocation results in the chimeric fusion protein E2A-HLF that results in a rare form of pro-B-cell acute lymphoblastic leukemia (ALL). bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269843 [Multi-domain]  Cd Length: 60  Bit Score: 39.46  E-value: 2.37e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 442619872 594 KAYQDRLKNNEASRVSRRKTKVREEEEKRAEDTLLAENLRLRA 636
Cdd:cd14695    4 KYWERRRKNNLAAKRSRDARRLKENQIAIRAAFLEKENAALRA 46
BRLZ smart00338
basic region leucin zipper;
589-654 3.27e-04

basic region leucin zipper;


Pssm-ID: 197664 [Multi-domain]  Cd Length: 65  Bit Score: 39.08  E-value: 3.27e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442619872   589 SEEERKAyQDRLKNNEASRVSRRKTKVREEE-EKRAEDtLLAENLRLRARADEVASRERKFKKYLME 654
Cdd:smart00338   1 EEDEKRR-RRRERNREAARRSRERKKAEIEElERKVEQ-LEAENERLKKEIERLRRELEKLKSELEE 65
bZIP_CEBPB cd14712
Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein beta (CEBPB): a ...
588-645 5.59e-04

Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein beta (CEBPB): a DNA-binding and dimerization domain; CEBPB is a key regulator of metabolism, adipocyte differentiation, myogenesis, and macrophage activation. It is expressed as three distinct isoforms from an intronless gene through alternative translation initiation: CEBPB1 (or liver-enriched activator protein 1, LAP1); CEBPB2 (OR LAP2); and CEBPB3 (or liver-enriched inhibitory protein, LIP). LAP1/2 function as transcriptional activators while LIP is a repressor due to its lack of a transactivation domain. The relative expression of LAP and LIP has effects on inflammation, ER stress, and insulin resistance. CEBPs (or C/EBPs) are Basic leucine zipper (bZIP) transcription factors that regulate many cellular processes. There are six CEBP proteins in mammalian cells including CEBPA (alpha), CEBPB (beta), CEBPG (gamma), CEBPD (delta), and CEBPE (epsilon), which all contain highly conserved bZIP domains at their C-termini and variations at their N-terminal regions. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269860  Cd Length: 71  Bit Score: 38.92  E-value: 5.59e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 442619872 588 KSEEERKayQDRLKNNEASRVSRRKTKVREEEEKRAEDTLLAENLRLRARADEVaSRE 645
Cdd:cd14712    6 KHSDEYK--IRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQL-SRE 60
bZIP_CEBPG cd14713
Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein gamma (CEBPG): a ...
589-650 9.70e-04

Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein gamma (CEBPG): a DNA-binding and dimerization domain; CEBPG is an important regulator of cellular senescence; mouse embryonic fibroblasts deficient of CEBPG proliferated poorly, entered senescence prematurely, and expressed elevated levels of proinflammatory genes. It is also the primary transcription factor that regulates antioxidant and DNA repair transcripts in normal bronchial epithelial cells. In a subset of AML patients with CEBPA hypermethylation, CEBPG is significantly overexpressed. CEBPG is the shortest CEBP protein and it lacks a transactivation domain. It acts as a regulator and buffering reservoir against the transcriptional activities of other CEBP proteins. CEBPs (or C/EBPs) are Basic leucine zipper (bZIP) transcription factors that regulate many cellular processes. There are six CEBP proteins in mammalian cells including CEBPA (alpha), CEBPB (beta), CEBPG (gamma), CEBPD (delta), and CEBPE (epsilon), which all contain highly conserved bZIP domains at their C-termini and variations at their N-terminal regions. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269861  Cd Length: 61  Bit Score: 37.83  E-value: 9.70e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 442619872 589 SEEERKAyqdRLKNNEASRVSRRKTKVREEEEKRAEDTLLAENLRLRARAdEVASRERKFKK 650
Cdd:cd14713    3 SDEYRKR---RERNNLAVKKSREKSKQKAQETLQRVNQLKEENERLEAKI-KLLSKELSVLK 60
PTZ00121 PTZ00121
MAEBL; Provisional
587-667 2.71e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 41.28  E-value: 2.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442619872  587 MKSEEERKAYQDRLKNNEASRVSRRKTKV-----REEEEKRAEDTLLAENLRLRARADEVASRERKFKKYLMERQRQKST 661
Cdd:PTZ00121 1607 MKAEEAKKAEEAKIKAEELKKAEEEKKKVeqlkkKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEED 1686

                  ....*.
gi 442619872  662 YVKQEQ 667
Cdd:PTZ00121 1687 EKKAAE 1692
bZIP_GCN4 cd12193
Basic leucine zipper (bZIP) domain of General control protein GCN4: a DNA-binding and ...
599-638 3.34e-03

Basic leucine zipper (bZIP) domain of General control protein GCN4: a DNA-binding and dimerization domain; GCN4 was identified in Saccharomyces cerevisiae from mutations in a deficiency in activation with the general amino acid control pathway. GCN4 encodes a trans-activator of amino acid biosynthetic genes containing 2 acidic activation domains and a C-terminal bZIP domain. In amino acid-deprived cells, GCN4 is up-regulated leading to transcriptional activation of genes encoding amino acid biosynthetic enzymes. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269833 [Multi-domain]  Cd Length: 54  Bit Score: 36.00  E-value: 3.34e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 442619872 599 RLKNNEASRVSR-RKTKVREEEEKRAEDtLLAENLRLRARA 638
Cdd:cd12193    7 RARNTLAARRSRaRKLEEMEELEKRVEE-LEAENEELKTRA 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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