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Conserved domains on  [gi|388490270|ref|NP_001253980|]
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lysosomal cholesterol signaling protein isoform 2 [Homo sapiens]

Protein Classification

AEC family transporter( domain architecture ID 10002109)

AEC (auxin efflux carrier) family transporter; AEC (auxin efflux carrier) family transporter similar to plant PIN proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DEP_GPR155 cd04443
DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins. GRP155-like ...
723-805 1.86e-51

DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins. GRP155-like proteins, also known as PGR22, contain an N-terminal permease domain, a central transmembrane region and a C-terminal DEP domain. They are orphan receptors of the class B G protein-coupled receptors. Their function is unknown.


:

Pssm-ID: 239890 [Multi-domain]  Cd Length: 83  Bit Score: 174.06  E-value: 1.86e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 723 CQQFIHYHRDLCIRNIVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLF 802
Cdd:cd04443    1 CEQFVRYHLDQCRQDIVKDRRCGLRTYKGVFCGCDLVSWLIEVGLAQDRGEAVLYGRRLLQGGVLQHITNEHHFRDENLL 80

                 ...
gi 388490270 803 YRF 805
Cdd:cd04443   81 YRF 83
YfdV COG0679
Predicted permease, AEC (auxin efflux carrier) family [General function prediction only];
42-366 5.08e-32

Predicted permease, AEC (auxin efflux carrier) family [General function prediction only];


:

Pssm-ID: 440443  Cd Length: 308  Bit Score: 126.84  E-value: 5.08e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  42 LFPALLECFGIVLCGYIAGRANVITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVdWSFLYSILIAkASVFFIVCVLT 121
Cdd:COG0679    4 ILSAILPIFLLIALGYLLGRRGLLPEEDAKGLSRLVFYVALPALLFSSLATADLSEL-LDLLSLLLAA-LLATLLLFLLA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 122 LLVAspdsRFSK-----AGLFPIFATQSNDFALGYPIVEALYQttyPEYLQYIYLVAPISLMMLNPIGFIFCEIqkwkdt 196
Cdd:COG0679   82 LLLA----RLLKldraeRGVLALAASFGNTGFLGLPLALALFG---EEGLAYAALYDAVNNLLLNTLGVILLSR------ 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 197 qnASQNKIKIVGLGLLRVLQNPIVFMVFIGIAFNFiLDRKVPVYVENFLDGLGNSFSGSALFYLGLTMVG-KIKRLKKSA 275
Cdd:COG0679  149 --GGGGGASSLKKVLKKLLRNPLIIAILLGLLLNL-LGIPLPAPLDDTLDLLGGAAIPLALLALGASLALsRLKGDLKLV 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 276 FVVLILlitaKLLVLPLLCREMVELLDkgdsvVNHTSLsNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTFVSA 355
Cdd:COG0679  226 LLASLL----KLLLLPLLALLLALLLG-----LDGLLL-QVLVLLAAMPTAVNAYVLAERYGGDPELAASAVLLSTLLSL 295
                        330
                 ....*....|.
gi 388490270 356 PIMYVSAWLLT 366
Cdd:COG0679  296 VTLPLWLALLG 306
 
Name Accession Description Interval E-value
DEP_GPR155 cd04443
DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins. GRP155-like ...
723-805 1.86e-51

DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins. GRP155-like proteins, also known as PGR22, contain an N-terminal permease domain, a central transmembrane region and a C-terminal DEP domain. They are orphan receptors of the class B G protein-coupled receptors. Their function is unknown.


Pssm-ID: 239890 [Multi-domain]  Cd Length: 83  Bit Score: 174.06  E-value: 1.86e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 723 CQQFIHYHRDLCIRNIVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLF 802
Cdd:cd04443    1 CEQFVRYHLDQCRQDIVKDRRCGLRTYKGVFCGCDLVSWLIEVGLAQDRGEAVLYGRRLLQGGVLQHITNEHHFRDENLL 80

                 ...
gi 388490270 803 YRF 805
Cdd:cd04443   81 YRF 83
YfdV COG0679
Predicted permease, AEC (auxin efflux carrier) family [General function prediction only];
42-366 5.08e-32

Predicted permease, AEC (auxin efflux carrier) family [General function prediction only];


Pssm-ID: 440443  Cd Length: 308  Bit Score: 126.84  E-value: 5.08e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  42 LFPALLECFGIVLCGYIAGRANVITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVdWSFLYSILIAkASVFFIVCVLT 121
Cdd:COG0679    4 ILSAILPIFLLIALGYLLGRRGLLPEEDAKGLSRLVFYVALPALLFSSLATADLSEL-LDLLSLLLAA-LLATLLLFLLA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 122 LLVAspdsRFSK-----AGLFPIFATQSNDFALGYPIVEALYQttyPEYLQYIYLVAPISLMMLNPIGFIFCEIqkwkdt 196
Cdd:COG0679   82 LLLA----RLLKldraeRGVLALAASFGNTGFLGLPLALALFG---EEGLAYAALYDAVNNLLLNTLGVILLSR------ 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 197 qnASQNKIKIVGLGLLRVLQNPIVFMVFIGIAFNFiLDRKVPVYVENFLDGLGNSFSGSALFYLGLTMVG-KIKRLKKSA 275
Cdd:COG0679  149 --GGGGGASSLKKVLKKLLRNPLIIAILLGLLLNL-LGIPLPAPLDDTLDLLGGAAIPLALLALGASLALsRLKGDLKLV 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 276 FVVLILlitaKLLVLPLLCREMVELLDkgdsvVNHTSLsNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTFVSA 355
Cdd:COG0679  226 LLASLL----KLLLLPLLALLLALLLG-----LDGLLL-QVLVLLAAMPTAVNAYVLAERYGGDPELAASAVLLSTLLSL 295
                        330
                 ....*....|.
gi 388490270 356 PIMYVSAWLLT 366
Cdd:COG0679  296 VTLPLWLALLG 306
Mem_trans pfam03547
Membrane transport protein; This family includes auxin efflux carrier proteins and other ...
45-358 1.34e-15

Membrane transport protein; This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life.


Pssm-ID: 308904  Cd Length: 341  Bit Score: 78.97  E-value: 1.34e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270   45 ALLECFGIVLCGYIAGRANVITSTQAKGLGNFVSRFALPALLFKNMVVLNF--SNVDWSFLYSILIAKASVFFIVCVLTL 122
Cdd:pfam03547   5 AVLPVFVIMLLGYLAGKWGIFPPDQAKGINNFVVSFALPLLIFSFLAQTNTleMLIQFWLLPVLVVLIVGISILIGFLVS 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  123 LVASPDSRFSkaGLFPIFATQSNDFALGYPIVEALYQTTYPE--------YLQYIYLVAPISLMMLNP-----IGFIFCE 189
Cdd:pfam03547  85 KIFKPPLDWR--IVLFLLSAFPNTGFLGIPLLKALYGESSRGvsylsisvQLGVILIYTYLYFLIEYRgekedASEESGD 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  190 IQKWKDTQNASQNKI----------KIVGLGLLRVLQNPIVFMVFIGIAF---NFILDRKVPVYVENFLDGLGNSFSGSA 256
Cdd:pfam03547 163 TSHSIVSINEDSDVLsldgaepmtrLILIKVLLKLILNPPTIASLLGLILglvGFLWPLIFPALITSSINILGDAAIPVA 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  257 LFYLGLTMVGKIKRLKKSAFVVLILLItAKLLVLPLLCREMVELLDKgDSVVNHTSLSNYAFLYGVFPvapgvAIFATQF 336
Cdd:pfam03547 243 LFALGLNLALGPRKSSCGNAFATNALI-LRLILMPLIMLGAVLAAGL-RGLTLLVALIAAALPPGIVL-----GVIAQLF 315
                         330       340
                  ....*....|....*....|..
gi 388490270  337 NMEVEIITSGMVISTFVSAPIM 358
Cdd:pfam03547 316 NVGEREASTALLWGYILALLSL 337
DEP pfam00610
Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); The DEP domain is responsible for ...
739-805 2.32e-13

Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); The DEP domain is responsible for mediating intracellular protein targeting and regulation of protein stability in the cell. The DEP domain is present in a number of signaling molecules, including Regulator of G protein Signaling (RGS) proteins, and has been implicated in membrane targeting. New findings in yeast, however, demonstrate a major role for a DEP domain in mediating the interaction of an RGS protein to the C-terminal tail of a GPCR, thus placing RGS in close proximity with its substrate G protein alpha subunit.


Pssm-ID: 459867  Cd Length: 71  Bit Score: 65.69  E-value: 2.32e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 388490270  739 VKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEY-EFRDEYLFYRF 805
Cdd:pfam00610   4 LKDRRKHLKTYPNCFTGSEAVDWLMDNLEIITREEAVELGQLLLDQGLIHHVGDKHgLFKDSYYFYRF 71
DEP smart00049
Domain found in Dishevelled, Egl-10, and Pleckstrin; Domain of unknown function present in ...
738-805 4.38e-12

Domain found in Dishevelled, Egl-10, and Pleckstrin; Domain of unknown function present in signalling proteins that contain PH, rasGEF, rhoGEF, rhoGAP, RGS, PDZ domains. DEP domain in Drosophila dishevelled is essential to rescue planar polarity defects and induce JNK signalling (Cell 94, 109-118).


Pssm-ID: 214489  Cd Length: 77  Bit Score: 62.30  E-value: 4.38e-12
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270   738 IVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYE--FRDEYLFYRF 805
Cdd:smart00049   6 KLRDRKYFLKTYPNCFTGSELVDWLMDNLEIIDREEAVHLGQLLLDEGLIHHVNGPNKhtFKDSKALYRF 75
PRK09903 PRK09903
transporter YfdV;
46-361 2.32e-03

transporter YfdV;


Pssm-ID: 104216  Cd Length: 314  Bit Score: 41.18  E-value: 2.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  46 LLECFGIVLCGYIAGRANVITSTQAKGLGNFVSRFALPALLFKNMVVLN----FSNVDWSFLYSILIAKASVFFIVCVLT 121
Cdd:PRK09903   9 LLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVSITRANremiFADTRLTLVSLVVIVGCFFFSWFGCYK 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 122 LLVASpdsrFSKAGLFPIFATQSNDFALGYPIVEALYQTTYPEYLqYIYLVAPISLMMLNPIGFIFCEIQKWKDTQNASQ 201
Cdd:PRK09903  89 FFKRT----HAEAAVCALIAGSPTIGFLGFAVLDPIYGDSVSTGL-VVAIISIIVNAITIPIGLYLLNPSSGADGKKNSN 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 202 NKikivglGLLRVLQNPIVFMVFIGIAFnFILDRKVPVYVENFLDGLGNSFSGSALFYLGLTMVGkiKRLKKSAFVVLIL 281
Cdd:PRK09903 164 LS------ALISAAKEPVVWAPVLATIL-VLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLTLAA--HKFEFSAEIAYNT 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 282 LItaKLLVLPLlcremvELLDKGDSVVNHTSLSNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTF---VSAPI- 357
Cdd:PRK09903 235 FL--KLILMPL------ALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLgfvVTAPLw 306

                 ....
gi 388490270 358 MYVS 361
Cdd:PRK09903 307 IYVS 310
 
Name Accession Description Interval E-value
DEP_GPR155 cd04443
DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins. GRP155-like ...
723-805 1.86e-51

DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins. GRP155-like proteins, also known as PGR22, contain an N-terminal permease domain, a central transmembrane region and a C-terminal DEP domain. They are orphan receptors of the class B G protein-coupled receptors. Their function is unknown.


Pssm-ID: 239890 [Multi-domain]  Cd Length: 83  Bit Score: 174.06  E-value: 1.86e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 723 CQQFIHYHRDLCIRNIVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLF 802
Cdd:cd04443    1 CEQFVRYHLDQCRQDIVKDRRCGLRTYKGVFCGCDLVSWLIEVGLAQDRGEAVLYGRRLLQGGVLQHITNEHHFRDENLL 80

                 ...
gi 388490270 803 YRF 805
Cdd:cd04443   81 YRF 83
YfdV COG0679
Predicted permease, AEC (auxin efflux carrier) family [General function prediction only];
42-366 5.08e-32

Predicted permease, AEC (auxin efflux carrier) family [General function prediction only];


Pssm-ID: 440443  Cd Length: 308  Bit Score: 126.84  E-value: 5.08e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  42 LFPALLECFGIVLCGYIAGRANVITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVdWSFLYSILIAkASVFFIVCVLT 121
Cdd:COG0679    4 ILSAILPIFLLIALGYLLGRRGLLPEEDAKGLSRLVFYVALPALLFSSLATADLSEL-LDLLSLLLAA-LLATLLLFLLA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 122 LLVAspdsRFSK-----AGLFPIFATQSNDFALGYPIVEALYQttyPEYLQYIYLVAPISLMMLNPIGFIFCEIqkwkdt 196
Cdd:COG0679   82 LLLA----RLLKldraeRGVLALAASFGNTGFLGLPLALALFG---EEGLAYAALYDAVNNLLLNTLGVILLSR------ 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 197 qnASQNKIKIVGLGLLRVLQNPIVFMVFIGIAFNFiLDRKVPVYVENFLDGLGNSFSGSALFYLGLTMVG-KIKRLKKSA 275
Cdd:COG0679  149 --GGGGGASSLKKVLKKLLRNPLIIAILLGLLLNL-LGIPLPAPLDDTLDLLGGAAIPLALLALGASLALsRLKGDLKLV 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 276 FVVLILlitaKLLVLPLLCREMVELLDkgdsvVNHTSLsNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTFVSA 355
Cdd:COG0679  226 LLASLL----KLLLLPLLALLLALLLG-----LDGLLL-QVLVLLAAMPTAVNAYVLAERYGGDPELAASAVLLSTLLSL 295
                        330
                 ....*....|.
gi 388490270 356 PIMYVSAWLLT 366
Cdd:COG0679  296 VTLPLWLALLG 306
DEP cd04371
DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first ...
725-804 4.78e-21

DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered. The function of this domain is still not clear, but it is believed to be important for the membrane association of the signaling proteins in which it is present. New studies show that the DEP domain of Sst2, a yeast RGS protein is necessary and sufficient for receptor interaction.


Pssm-ID: 239836  Cd Length: 81  Bit Score: 87.78  E-value: 4.78e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 725 QFIHYHRDLCIRNIVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITN-EYEFRDEYLFY 803
Cdd:cd04371    1 DLVRIMLDSDSGVPIKDRKYHLKTYPNCFTGSELVDWLLDNLEAITREEAVELGQALLKHGLIHHVSDdKHTFRDSYALY 80

                 .
gi 388490270 804 R 804
Cdd:cd04371   81 R 81
Mem_trans pfam03547
Membrane transport protein; This family includes auxin efflux carrier proteins and other ...
45-358 1.34e-15

Membrane transport protein; This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life.


Pssm-ID: 308904  Cd Length: 341  Bit Score: 78.97  E-value: 1.34e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270   45 ALLECFGIVLCGYIAGRANVITSTQAKGLGNFVSRFALPALLFKNMVVLNF--SNVDWSFLYSILIAKASVFFIVCVLTL 122
Cdd:pfam03547   5 AVLPVFVIMLLGYLAGKWGIFPPDQAKGINNFVVSFALPLLIFSFLAQTNTleMLIQFWLLPVLVVLIVGISILIGFLVS 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  123 LVASPDSRFSkaGLFPIFATQSNDFALGYPIVEALYQTTYPE--------YLQYIYLVAPISLMMLNP-----IGFIFCE 189
Cdd:pfam03547  85 KIFKPPLDWR--IVLFLLSAFPNTGFLGIPLLKALYGESSRGvsylsisvQLGVILIYTYLYFLIEYRgekedASEESGD 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  190 IQKWKDTQNASQNKI----------KIVGLGLLRVLQNPIVFMVFIGIAF---NFILDRKVPVYVENFLDGLGNSFSGSA 256
Cdd:pfam03547 163 TSHSIVSINEDSDVLsldgaepmtrLILIKVLLKLILNPPTIASLLGLILglvGFLWPLIFPALITSSINILGDAAIPVA 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  257 LFYLGLTMVGKIKRLKKSAFVVLILLItAKLLVLPLLCREMVELLDKgDSVVNHTSLSNYAFLYGVFPvapgvAIFATQF 336
Cdd:pfam03547 243 LFALGLNLALGPRKSSCGNAFATNALI-LRLILMPLIMLGAVLAAGL-RGLTLLVALIAAALPPGIVL-----GVIAQLF 315
                         330       340
                  ....*....|....*....|..
gi 388490270  337 NMEVEIITSGMVISTFVSAPIM 358
Cdd:pfam03547 316 NVGEREASTALLWGYILALLSL 337
DEP pfam00610
Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); The DEP domain is responsible for ...
739-805 2.32e-13

Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); The DEP domain is responsible for mediating intracellular protein targeting and regulation of protein stability in the cell. The DEP domain is present in a number of signaling molecules, including Regulator of G protein Signaling (RGS) proteins, and has been implicated in membrane targeting. New findings in yeast, however, demonstrate a major role for a DEP domain in mediating the interaction of an RGS protein to the C-terminal tail of a GPCR, thus placing RGS in close proximity with its substrate G protein alpha subunit.


Pssm-ID: 459867  Cd Length: 71  Bit Score: 65.69  E-value: 2.32e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 388490270  739 VKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEY-EFRDEYLFYRF 805
Cdd:pfam00610   4 LKDRRKHLKTYPNCFTGSEAVDWLMDNLEIITREEAVELGQLLLDQGLIHHVGDKHgLFKDSYYFYRF 71
DEP_1_P-Rex cd04439
DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in P-Rex-like proteins. The P-Rex ...
720-805 2.49e-12

DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in P-Rex-like proteins. The P-Rex family is the guanine-nucleotide exchange factor (GEF) for the small GTPase Rac that contains an N-terminal RhoGEF domain, two DEP and PDZ domains. Rac-GEF activity is stimulated by phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), a lipid second messenger, and by the G beta-gamma subunits of heterotrimeric G proteins. The DEP domains are not involved in mediating these stimuli, but may be of importance for basal and stimulated levels Rac-GEF activity.


Pssm-ID: 239886  Cd Length: 81  Bit Score: 62.97  E-value: 2.49e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 720 KMTCQQfihyhrdlciRNIVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDE 799
Cdd:cd04439    6 KMMCKQ----------GSLIKDRRRKLSTFPKCFLGNEFVSWLLEIGEISKPEEGVNLGQALLENGIIHHVSDKHQFKNE 75

                 ....*.
gi 388490270 800 YLFYRF 805
Cdd:cd04439   76 QVLYRF 81
DEP smart00049
Domain found in Dishevelled, Egl-10, and Pleckstrin; Domain of unknown function present in ...
738-805 4.38e-12

Domain found in Dishevelled, Egl-10, and Pleckstrin; Domain of unknown function present in signalling proteins that contain PH, rasGEF, rhoGEF, rhoGAP, RGS, PDZ domains. DEP domain in Drosophila dishevelled is essential to rescue planar polarity defects and induce JNK signalling (Cell 94, 109-118).


Pssm-ID: 214489  Cd Length: 77  Bit Score: 62.30  E-value: 4.38e-12
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270   738 IVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYE--FRDEYLFYRF 805
Cdd:smart00049   6 KLRDRKYFLKTYPNCFTGSELVDWLMDNLEIIDREEAVHLGQLLLDEGLIHHVNGPNKhtFKDSKALYRF 75
DEP_2_DEP6 cd04441
DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in DEP6-like proteins. DEP6 proteins ...
737-805 1.00e-11

DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.


Pssm-ID: 239888  Cd Length: 85  Bit Score: 61.68  E-value: 1.00e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 388490270 737 NIVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRF 805
Cdd:cd04441   17 SILQVREEEGVKYERTFVGSEFIDWLLQEGEAESRREAVQLCRRLLEHGIIQHVSNKHHFFDSNLLYQF 85
DEP_1_DEP6 cd04442
DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in DEP6-like proteins. DEP6 proteins ...
738-805 4.23e-11

DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.


Pssm-ID: 239889 [Multi-domain]  Cd Length: 82  Bit Score: 59.52  E-value: 4.23e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 388490270 738 IVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEY-EFRDEYLFYRF 805
Cdd:cd04442   14 VIKDRRHHLRTYPNCFVGKELIDWLIEHKEASDRETAIKIMQKLLDHSIIHHVCDEHkEFKDAKLFYRF 82
DEP_2_P-Rex cd04440
DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in P-Rex-like proteins. The P-Rex ...
738-805 7.29e-08

DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in P-Rex-like proteins. The P-Rex family is the guanine-nucleotide exchange factor (GEF) for the small GTPase Rac that contains an N-terminal RhoGEF domain, two DEP and PDZ domains. Rac-GEF activity is stimulated by phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), a lipid second messenger, and the G beta-gamma subunits of heterotrimeric G proteins. The DEP domains are not involved in mediating these stimuli, but may be of importance for basal and stimulated levels Rac-GEF activity.


Pssm-ID: 239887  Cd Length: 93  Bit Score: 50.69  E-value: 7.29e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 388490270 738 IVKERRCGAKTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRF 805
Cdd:cd04440   23 VVKDRDYHLKTYKSVVPASKLVDWLLAQGDCRTREEAVILGVGLCNNGFMHHVLEKSEFKDEPLLFRF 90
DEP_PIKfyve cd04448
DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange ...
747-804 1.54e-07

DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol phosphate kinase) domain. PIKfyve-like proteins are important phosphatidylinositol (3)-monophosphate (PtdIns(3)P)-5-kinases, producing PtdIns(3,5)P2, which plays a major role in multivesicular body (MVB) sorting and control of retrograde traffic from the vacuole back to the endosome and/or Golgi. PIKfyve itself has been shown to be play a role in regulating early-endosome-to-trans-Golgi network (TGN) retrograde trafficking.


Pssm-ID: 239895  Cd Length: 81  Bit Score: 49.36  E-value: 1.54e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 388490270 747 KTSAGTFCGCDLVSWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYR 804
Cdd:cd04448   23 RTYTNCILGKELVNWLIRQGKAATRVQAIAIGQALLDAGWIECVSDDDLFRDEYALYK 80
DEP_Epac cd04437
DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in Epac-like proteins. Epac (exchange ...
734-814 1.71e-06

DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in Epac-like proteins. Epac (exchange proteins directly activated by cAMP) proteins are GEFs (guanine-nucleotide-exchange factors) for the small GTPases, Rap1 and Rap2. They are directly regulated by cyclic AMP, a second messenger that plays a role in the control of diverse cellular processes, such as cell adhesion and insulin secretion. Epac-like proteins share a common domain architecture, containing RasGEF, DEP and CAP-effector (cAMP binding) domains. The DEP domain is involved in membrane localization.


Pssm-ID: 239884  Cd Length: 125  Bit Score: 47.72  E-value: 1.71e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 734 CIRNIVKE----RRCgaktsagtfC-GCDLVSWLIEVGLAS-DRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRFLQ 807
Cdd:cd04437   16 LIRDRKYHlrtyRQC---------CvGTELVDWLLQQSPCVqSRSQAVGMWQVLLEEGVLLHVDQELHFQDKYQFYRFSD 86

                 ....*..
gi 388490270 808 KSPEQSP 814
Cdd:cd04437   87 DECSPAP 93
DEP_DEPDC5-like cd04449
DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in ...
752-805 6.10e-06

DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.


Pssm-ID: 239896  Cd Length: 83  Bit Score: 44.96  E-value: 6.10e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 388490270 752 TFCGCDLVSWLIE-VGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRF 805
Cdd:cd04449   29 CFIGSEAVSWLINnFEDVDTREEAVELGQELMNEGLIEHVSGRHPFLDGFYFYYI 83
PRK09903 PRK09903
transporter YfdV;
46-361 2.32e-03

transporter YfdV;


Pssm-ID: 104216  Cd Length: 314  Bit Score: 41.18  E-value: 2.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270  46 LLECFGIVLCGYIAGRANVITSTQAKGLGNFVSRFALPALLFKNMVVLN----FSNVDWSFLYSILIAKASVFFIVCVLT 121
Cdd:PRK09903   9 LLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVSITRANremiFADTRLTLVSLVVIVGCFFFSWFGCYK 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 122 LLVASpdsrFSKAGLFPIFATQSNDFALGYPIVEALYQTTYPEYLqYIYLVAPISLMMLNPIGFIFCEIQKWKDTQNASQ 201
Cdd:PRK09903  89 FFKRT----HAEAAVCALIAGSPTIGFLGFAVLDPIYGDSVSTGL-VVAIISIIVNAITIPIGLYLLNPSSGADGKKNSN 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 202 NKikivglGLLRVLQNPIVFMVFIGIAFnFILDRKVPVYVENFLDGLGNSFSGSALFYLGLTMVGkiKRLKKSAFVVLIL 281
Cdd:PRK09903 164 LS------ALISAAKEPVVWAPVLATIL-VLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLTLAA--HKFEFSAEIAYNT 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388490270 282 LItaKLLVLPLlcremvELLDKGDSVVNHTSLSNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTF---VSAPI- 357
Cdd:PRK09903 235 FL--KLILMPL------ALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLgfvVTAPLw 306

                 ....
gi 388490270 358 MYVS 361
Cdd:PRK09903 307 IYVS 310
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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