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Conserved domains on  [gi|269308215|ref|NP_001161411|]
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MAU2 chromatid cohesion factor homolog isoform 1 [Mus musculus]

Protein Classification

Cohesin_load domain-containing protein( domain architecture ID 10563562)

Cohesin_load domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Cohesin_load pfam10345
Cohesin loading factor; Cohesin_load is a common cohesin loading factor protein that is ...
 31-560 5.42e-113

Cohesin loading factor; Cohesin_load is a common cohesin loading factor protein that is conserved in fungi. It is associated with the cohesin complex and is required in G1 for cohesin binding to chromosomes but dispensable in G2 when cohesion has been established. It is referred to as both Ssl3, in pombe, and Scc4, in S.cerevisiae. It complexes with Mis4.


:

Pssm-ID: 463053 [Multi-domain]  Cd Length: 585  Bit Score: 351.23  E-value: 5.42e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215   31 WYLALLGFAEHFRTSSPP----------------KIRLCVHCLQAVF-PFKPPQRIEARTHLQLGSVLYHHTKNSEQARS 93
Cdd:pfam10345   1 YVALLLSLAEEYLTAAHKmvalvrseedleqyykLIATGLGCLEAVLkNFSLPPRQEARIRLRLASLLLEETENLDEAEE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215   94 HLEKAWLISQQIPqFEDVKFEAASLLSELYCQeNSVDAAKPLLRKAIQI--SQQTPYWHCRLLFQLAQLHTLEKDLVSAC 171
Cdd:pfam10345  81 YLSKAITLCERNR-LSDLKYAMQHLLARILFK-TNPKAALKALDRLIEDaeAYRHVHWVYAFRFLRASLLLQENDYSAAL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  172 DLLGVGAEYARVVGSEYTRALFLLSKGMLLL---MERKLQEVHPLLTLCGQivENWQGNPIQKESLRVFFLVLQVTHYLD 248
Cdd:pfam10345 159 ENLQSISELAEQRGDQAVRVVALLLEALLHLrssPSDSLEEAQRALAAARS--EQLQPSMQAIPQLRALLLLLDLLCSLM 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  249 AGQVKSVKPCLKQLQQCIQTI---STLHDD---EILPSNPADL-----FHWLPKEHMCVLVYLVTVMHSMQAGYLE-KAQ 316
Cdd:pfam10345 237 QGNPKQITEKLKQLQSFIDNLkdwSNWSDDgsiLIPIGKSSDGkdklvFSWLNKEDLYILGYLLSGVAYLPKNYDDnKAE 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  317 KYTDKALMQLEKLKMLDCSPILS------------SFQVILLEHIIMCRLVTGHKATALQEISQV-CQLCQQSPRLFSNH 383
Cdd:pfam10345 317 KFLEEALKLLEKLLSSLRPPSLSlsdasskilwrrSLRCYLLIYQAFAACVRSDWTKANEFLNALhKLLKKSELQLPGSL 396

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  384 AAQLHTLLGLYCVSVNCMDNAEAQFTTAL---------RLTNHQELWAFIVTNLASVYIREGNRHQE--VLYSLLERINP 452
Cdd:pfam10345 397 TPLLHYLLGLYAQGTGDLEAALAIYVSPLlsllpspskTTALDIPRELAILAALNLILILRDPRHPDhiELNWLLEQLEP 476

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  453 -DHSFPvsSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPA 531
Cdd:pfam10345 477 fCLNHP--NKSLRAAYYLVKALQAFPQNSLLDAKKHLQEALQAAKKIGNTQLLAILLNLMGARFFENVVGEQALKSARAA 554

                         570       580
                  ....*....|....*....|....*....
gi 269308215  532 MQLASKIPDMSVQLWSSALLRDLNKACGN 560
Cdd:pfam10345 555 RTLAKKSGDGLWQLVADGLLADLYEVQGE 583
 
Name Accession Description Interval E-value
Cohesin_load pfam10345
Cohesin loading factor; Cohesin_load is a common cohesin loading factor protein that is ...
 31-560 5.42e-113

Cohesin loading factor; Cohesin_load is a common cohesin loading factor protein that is conserved in fungi. It is associated with the cohesin complex and is required in G1 for cohesin binding to chromosomes but dispensable in G2 when cohesion has been established. It is referred to as both Ssl3, in pombe, and Scc4, in S.cerevisiae. It complexes with Mis4.


Pssm-ID: 463053 [Multi-domain]  Cd Length: 585  Bit Score: 351.23  E-value: 5.42e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215   31 WYLALLGFAEHFRTSSPP----------------KIRLCVHCLQAVF-PFKPPQRIEARTHLQLGSVLYHHTKNSEQARS 93
Cdd:pfam10345   1 YVALLLSLAEEYLTAAHKmvalvrseedleqyykLIATGLGCLEAVLkNFSLPPRQEARIRLRLASLLLEETENLDEAEE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215   94 HLEKAWLISQQIPqFEDVKFEAASLLSELYCQeNSVDAAKPLLRKAIQI--SQQTPYWHCRLLFQLAQLHTLEKDLVSAC 171
Cdd:pfam10345  81 YLSKAITLCERNR-LSDLKYAMQHLLARILFK-TNPKAALKALDRLIEDaeAYRHVHWVYAFRFLRASLLLQENDYSAAL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  172 DLLGVGAEYARVVGSEYTRALFLLSKGMLLL---MERKLQEVHPLLTLCGQivENWQGNPIQKESLRVFFLVLQVTHYLD 248
Cdd:pfam10345 159 ENLQSISELAEQRGDQAVRVVALLLEALLHLrssPSDSLEEAQRALAAARS--EQLQPSMQAIPQLRALLLLLDLLCSLM 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  249 AGQVKSVKPCLKQLQQCIQTI---STLHDD---EILPSNPADL-----FHWLPKEHMCVLVYLVTVMHSMQAGYLE-KAQ 316
Cdd:pfam10345 237 QGNPKQITEKLKQLQSFIDNLkdwSNWSDDgsiLIPIGKSSDGkdklvFSWLNKEDLYILGYLLSGVAYLPKNYDDnKAE 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  317 KYTDKALMQLEKLKMLDCSPILS------------SFQVILLEHIIMCRLVTGHKATALQEISQV-CQLCQQSPRLFSNH 383
Cdd:pfam10345 317 KFLEEALKLLEKLLSSLRPPSLSlsdasskilwrrSLRCYLLIYQAFAACVRSDWTKANEFLNALhKLLKKSELQLPGSL 396

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  384 AAQLHTLLGLYCVSVNCMDNAEAQFTTAL---------RLTNHQELWAFIVTNLASVYIREGNRHQE--VLYSLLERINP 452
Cdd:pfam10345 397 TPLLHYLLGLYAQGTGDLEAALAIYVSPLlsllpspskTTALDIPRELAILAALNLILILRDPRHPDhiELNWLLEQLEP 476

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  453 -DHSFPvsSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPA 531
Cdd:pfam10345 477 fCLNHP--NKSLRAAYYLVKALQAFPQNSLLDAKKHLQEALQAAKKIGNTQLLAILLNLMGARFFENVVGEQALKSARAA 554

                         570       580
                  ....*....|....*....|....*....
gi 269308215  532 MQLASKIPDMSVQLWSSALLRDLNKACGN 560
Cdd:pfam10345 555 RTLAKKSGDGLWQLVADGLLADLYEVQGE 583
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
385-523 6.11e-05

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 45.00  E-value: 6.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215 385 AQLHTLLGLYCVSVNCMDNAEAQFTTALRLT-NHQELWAfivtNLASVYIREGnRHQEVLYSLLE--RINPDHsfpvssh 461
Cdd:COG0457   42 AEALYNLGLAYLRLGRYEEALADYEQALELDpDDAEALN----NLGLALQALG-RYEEALEDYDKalELDPDD------- 109

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 269308215 462 clrAAAFYVRGLFSFFQGRYNEAKRFLRETLKmsnaedLNRLTACSLVLLGHIFYVLGNHRE 523
Cdd:COG0457  110 ---AEALYNLGLALLELGRYDEAIEAYERALE------LDPDDADALYNLGIALEKLGRYEE 162
 
Name Accession Description Interval E-value
Cohesin_load pfam10345
Cohesin loading factor; Cohesin_load is a common cohesin loading factor protein that is ...
 31-560 5.42e-113

Cohesin loading factor; Cohesin_load is a common cohesin loading factor protein that is conserved in fungi. It is associated with the cohesin complex and is required in G1 for cohesin binding to chromosomes but dispensable in G2 when cohesion has been established. It is referred to as both Ssl3, in pombe, and Scc4, in S.cerevisiae. It complexes with Mis4.


Pssm-ID: 463053 [Multi-domain]  Cd Length: 585  Bit Score: 351.23  E-value: 5.42e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215   31 WYLALLGFAEHFRTSSPP----------------KIRLCVHCLQAVF-PFKPPQRIEARTHLQLGSVLYHHTKNSEQARS 93
Cdd:pfam10345   1 YVALLLSLAEEYLTAAHKmvalvrseedleqyykLIATGLGCLEAVLkNFSLPPRQEARIRLRLASLLLEETENLDEAEE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215   94 HLEKAWLISQQIPqFEDVKFEAASLLSELYCQeNSVDAAKPLLRKAIQI--SQQTPYWHCRLLFQLAQLHTLEKDLVSAC 171
Cdd:pfam10345  81 YLSKAITLCERNR-LSDLKYAMQHLLARILFK-TNPKAALKALDRLIEDaeAYRHVHWVYAFRFLRASLLLQENDYSAAL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  172 DLLGVGAEYARVVGSEYTRALFLLSKGMLLL---MERKLQEVHPLLTLCGQivENWQGNPIQKESLRVFFLVLQVTHYLD 248
Cdd:pfam10345 159 ENLQSISELAEQRGDQAVRVVALLLEALLHLrssPSDSLEEAQRALAAARS--EQLQPSMQAIPQLRALLLLLDLLCSLM 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  249 AGQVKSVKPCLKQLQQCIQTI---STLHDD---EILPSNPADL-----FHWLPKEHMCVLVYLVTVMHSMQAGYLE-KAQ 316
Cdd:pfam10345 237 QGNPKQITEKLKQLQSFIDNLkdwSNWSDDgsiLIPIGKSSDGkdklvFSWLNKEDLYILGYLLSGVAYLPKNYDDnKAE 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  317 KYTDKALMQLEKLKMLDCSPILS------------SFQVILLEHIIMCRLVTGHKATALQEISQV-CQLCQQSPRLFSNH 383
Cdd:pfam10345 317 KFLEEALKLLEKLLSSLRPPSLSlsdasskilwrrSLRCYLLIYQAFAACVRSDWTKANEFLNALhKLLKKSELQLPGSL 396

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  384 AAQLHTLLGLYCVSVNCMDNAEAQFTTAL---------RLTNHQELWAFIVTNLASVYIREGNRHQE--VLYSLLERINP 452
Cdd:pfam10345 397 TPLLHYLLGLYAQGTGDLEAALAIYVSPLlsllpspskTTALDIPRELAILAALNLILILRDPRHPDhiELNWLLEQLEP 476

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  453 -DHSFPvsSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPA 531
Cdd:pfam10345 477 fCLNHP--NKSLRAAYYLVKALQAFPQNSLLDAKKHLQEALQAAKKIGNTQLLAILLNLMGARFFENVVGEQALKSARAA 554

                         570       580
                  ....*....|....*....|....*....
gi 269308215  532 MQLASKIPDMSVQLWSSALLRDLNKACGN 560
Cdd:pfam10345 555 RTLAKKSGDGLWQLVADGLLADLYEVQGE 583
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
385-523 6.11e-05

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 45.00  E-value: 6.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215 385 AQLHTLLGLYCVSVNCMDNAEAQFTTALRLT-NHQELWAfivtNLASVYIREGnRHQEVLYSLLE--RINPDHsfpvssh 461
Cdd:COG0457   42 AEALYNLGLAYLRLGRYEEALADYEQALELDpDDAEALN----NLGLALQALG-RYEEALEDYDKalELDPDD------- 109

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 269308215 462 clrAAAFYVRGLFSFFQGRYNEAKRFLRETLKmsnaedLNRLTACSLVLLGHIFYVLGNHRE 523
Cdd:COG0457  110 ---AEALYNLGLALLELGRYDEAIEAYERALE------LDPDDADALYNLGIALEKLGRYEE 162
NrfG COG4235
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ...
 385-503 9.95e-05

Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443378 [Multi-domain]  Cd Length: 131  Bit Score: 42.69  E-value: 9.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215 385 AQLHTLLGLYCVSVNCMDNAEAQFTTALRLT-NHQELWAfivtNLASVYIREGNRHQ-EVLYSLLERINPDHsfpvsshc 462
Cdd:COG4235   17 AEGWLLLGRAYLRLGRYDEALAAYEKALRLDpDNADALL----DLAEALLAAGDTEEaEELLERALALDPDN-------- 84

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 269308215 463 lrAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRL 503
Cdd:COG4235   85 --PEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARL 123
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
385-523 2.06e-04

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 43.46  E-value: 2.06e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215 385 AQLHTLLGLYCVSVNCMDNAEAQFTTALRLT-NHQELWAfivtNLASVYIREGnRHQEVLYSLLE--RINPDHsfpvssh 461
Cdd:COG0457    8 AEAYNNLGLAYRRLGRYEEAIEDYEKALELDpDDAEALY----NLGLAYLRLG-RYEEALADYEQalELDPDD------- 75

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 269308215 462 clrAAAFYVRGLFSFFQGRYNEAKRFLRETLKmsnaedLNRLTACSLVLLGHIFYVLGNHRE 523
Cdd:COG0457   76 ---AEALNNLGLALQALGRYEEALEDYDKALE------LDPDDAEALYNLGLALLELGRYDE 128
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 66-209 3.50e-04

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 42.79  E-value: 3.50e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  66 PQRIEArtHLQLGSvLYHHTKNSEQARSHLEKAWlisqqipQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQISQQ 145
Cdd:COG2956   73 PDRAEA--LLELAQ-DYLKAGLLDRAEELLEKLL-------ELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPE 142

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 269308215 146 TPYWHCrllfQLAQLHTLEKDLVSACDLLgvgaEYARVVGSEYTRALFLLskGMLLLMERKLQE 209
Cdd:COG2956  143 NAHAYC----ELAELYLEQGDYDEAIEAL----EKALKLDPDCARALLLL--AELYLEQGDYEE 196
PilF COG3063
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
402-495 1.51e-03

Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];


Pssm-ID: 442297 [Multi-domain]  Cd Length: 94  Bit Score: 38.23  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215 402 DNAEAQFTTALRLtnhQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHsfpvsshclrAAAFYVRGLFSFFQGRY 481
Cdd:COG3063    9 EEAEEYYEKALEL---DPDNADALNNLGLLLLEQGRYDEAIALEKALKLDPNN----------AEALLNLAELLLELGDY 75

                         90
                 ....*....|....
gi 269308215 482 NEAKRFLRETLKMS 495
Cdd:COG3063   76 DEALAYLERALELD 89
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 66-170 2.79e-03

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 40.10  E-value: 2.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  66 PQRIEArtHLQLGSvLYHHTKNSEQARSHLEKawLISQQiPQFEDVKFEaaslLSELYCQENSVDAAKPLLRKAIQISQQ 145
Cdd:COG2956   39 PETVEA--HLALGN-LYRRRGEYDRAIRIHQK--LLERD-PDRAEALLE----LAQDYLKAGLLDRAEELLEKLLELDPD 108

                         90       100
                 ....*....|....*....|....*
gi 269308215 146 TPywhcRLLFQLAQLHTLEKDLVSA 170
Cdd:COG2956  109 DA----EALRLLAEIYEQEGDWEKA 129
BepA COG4783
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ...
 66-153 3.55e-03

Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443813 [Multi-domain]  Cd Length: 139  Bit Score: 38.25  E-value: 3.55e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  66 PQRIEArtHLQLGsVLYHHTKNSEQARSHLEKAWLISQQIPqfedvkfEAASLLSELYCQENSVDAAKPLLRKAIQISQQ 145
Cdd:COG4783   35 PDNPEA--FALLG-EILLQLGDLDEAIVLLHEALELDPDEP-------EARLNLGLALLKAGDYDEALALLEKALKLDPE 104


                 ....*...
gi 269308215 146 TPYWHCRL 153
Cdd:COG4783  105 HPEAYLRL 112
LapB COG2956
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ...
 71-174 7.67e-03

Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442196 [Multi-domain]  Cd Length: 275  Bit Score: 38.56  E-value: 7.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215  71 ARTHLQLGSvLYHHTKNSEQARSHLEKAWlisQQIPQFedvkFEAASLLSELYCQENSVDAAKPLLRKAIQISQQTPywh 150
Cdd:COG2956  178 ARALLLLAE-LYLEQGDYEEAIAALERAL---EQDPDY----LPALPRLAELYEKLGDPEEALELLRKALELDPSDD--- 246

                         90       100
                 ....*....|....*....|....
gi 269308215 151 crLLFQLAQLHTLEKDLVSACDLL 174
Cdd:COG2956  247 --LLLALADLLERKEGLEAALALL 268
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
 357-510 8.67e-03

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 39.21  E-value: 8.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269308215 357 GHKATALQEISQVCQLCQQSPRLFSNHAAqLHTLLGLYCVSVNCMDNAEAQFTTALRL-TNHQELWAfivtNLASVYIRE 435
Cdd:COG3914   85 ALLLQALGRYEEALALYRRALALNPDNAE-ALFNLGNLLLALGRLEEALAALRRALALnPDFAEAYL----NLGEALRRL 159

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 269308215 436 GnRHQEVLYSLLE--RINPDHsfpvsshclrAAAFYVRGLFSFFQGRYNEAKRFLRETLKMsnaeDLNRLTACSLVL 510
Cdd:COG3914  160 G-RLEEAIAALRRalELDPDN----------AEALNNLGNALQDLGRLEEAIAAYRRALEL----DPDNADAHSNLL 221
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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