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Conserved domains on  [gi|253314509|ref|NP_001156616|]
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proprotein convertase subtilisin/kexin type 5 isoform 2 precursor [Mus musculus]

Protein Classification

S8 family peptidase( domain architecture ID 13872968)

S8 family peptidase is a subtilisin-like serine protease containing a Asp/His/Ser catalytic triad that is not homologous to trypsin; similar to human neuroendocrine convertase 2 that is involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
128-422 1.45e-165

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


:

Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 484.37  E-value: 1.45e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 128 FNDPKWPSMWYMHCSD-NTHPCQSDMNIEGAWKRGYTGKNIVVTILDDGIERTHPDLMQNYDALASCDVNGNDLDPMPRY 206
Cdd:cd04059    1 PNDPLFPYQWYLKNTGqAGGTPGLDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 207 DasNENKHGTRCAGEVAATANNSHCTVGIAFNAKIGGVRMLDGDVTDMVEAKSVSYNPQHVHIYSASWGPDDDGKTVDGP 286
Cdd:cd04059   81 D--DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 287 APLTRQAFENGVRMGRRGLGSVFVWASGNGGRSKDHCSCDGYTNSIYTISISSTAESGKKPWYLEECSSTLATTYSSGE- 365
Cdd:cd04059  159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSg 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 253314509 366 SYDKKIITTDLR--QRCTDNHTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSR 422
Cdd:cd04059  239 NPEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
507-597 4.69e-39

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


:

Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 139.33  E-value: 4.69e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  507 LEHVVVRITITHPRRGDLAIYLTSPSGTRSQLLANRLFDHSMEGFKNWEFMTIHCWGERAAGDWVLEVYDTpsqlrNFKT 586
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTLEVTDT-----APGD 75
                          90
                  ....*....|.
gi 253314509  587 PGKLKEWSLVL 597
Cdd:pfam01483  76 TGTLNSWQLTL 86
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
40-116 3.12e-37

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


:

Pssm-ID: 465126  Cd Length: 77  Bit Score: 133.88  E-value: 3.12e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 253314509   40 HWAVKIAGGFAEADRIASKYGFINVGQIGALKDYYHFYHSRTIKRSVLSSRGTHSFISMEPKVEWIQQQVVKKRTKR 116
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGLEDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
GF_recep_IV super family cl37890
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
637-746 3.06e-14

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


The actual alignment was detected with superfamily member pfam14843:

Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 70.48  E-value: 3.06e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  637 PCDPECSEVGCDGPGPDHCSDCLHYyyklkNNTRICVSSCP-----PGHYhADKKRCRKCAPNCE------SCFGSHGNQ 705
Cdd:pfam14843   1 VCDPLCSSEGCWGPGPDQCLSCRNF-----SRGGTCVESCNilqgePREY-VVNSTCVPCHPECLpqngtaTCSGPGADN 74
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 253314509  706 CLSCKygYFLNeeTSSCVTQCPDGSYEDI--------KKNVCGKCSENC 746
Cdd:pfam14843  75 CTKCA--HFRD--GPHCVSSCPSGVLGENdliwkyadANGVCQPCHPNC 119
FU smart00261
Furin-like repeats;
781-825 3.28e-10

Furin-like repeats;


:

Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 55.98  E-value: 3.28e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 253314509   781 GHDCQPCHRFCATCSGAGADGCINCTEGYVMEEGRCVQSCSVSYY 825
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKCVSECPPGTY 45
FU smart00261
Furin-like repeats;
835-869 2.63e-07

Furin-like repeats;


:

Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 47.89  E-value: 2.63e-07
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 253314509   835 KSCKRCDNSCLTCNGPGFKNCSSCPSGYLLDLGTC 869
Cdd:smart00261   2 GECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKC 36
PLAC pfam08686
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short ...
875-912 7.03e-05

PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short six-cysteine region that is usually found at the C terminal of proteins. It is found in a range of proteins including PACE4 (paired basic amino acid cleaving enzyme 4) and the extracellular matrix protein lacunin.


:

Pssm-ID: 462560  Cd Length: 31  Bit Score: 40.60  E-value: 7.03e-05
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 253314509  875 CKDATeeswaegGFCMLVKKNNLCQRKVLQQLCCKTCT 912
Cdd:pfam08686   1 CKDKF-------ANCSLVVQARLCSHKYYRQFCCRSCS 31
FU smart00261
Furin-like repeats;
736-778 9.81e-05

Furin-like repeats;


:

Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 40.57  E-value: 9.81e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 253314509   736 KNVCGKCSENCKACIG--FHNCTECKGGLSLQGSRCSVTCEDGQF 778
Cdd:smart00261   1 DGECKPCHPECATCTGpgPDDCTSCKHGFFLDGGKCVSECPPGTY 45
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
128-422 1.45e-165

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 484.37  E-value: 1.45e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 128 FNDPKWPSMWYMHCSD-NTHPCQSDMNIEGAWKRGYTGKNIVVTILDDGIERTHPDLMQNYDALASCDVNGNDLDPMPRY 206
Cdd:cd04059    1 PNDPLFPYQWYLKNTGqAGGTPGLDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 207 DasNENKHGTRCAGEVAATANNSHCTVGIAFNAKIGGVRMLDGDVTDMVEAKSVSYNPQHVHIYSASWGPDDDGKTVDGP 286
Cdd:cd04059   81 D--DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 287 APLTRQAFENGVRMGRRGLGSVFVWASGNGGRSKDHCSCDGYTNSIYTISISSTAESGKKPWYLEECSSTLATTYSSGE- 365
Cdd:cd04059  159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSg 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 253314509 366 SYDKKIITTDLR--QRCTDNHTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSR 422
Cdd:cd04059  239 NPEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
164-447 1.56e-66

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 224.26  E-value: 1.56e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  164 GKNIVVTILDDGIERTHPDLMQNYDALASCDVNG----NDLDPMPRYDASNENKHGTRCAGEVAATANNSHCTVGIAFNA 239
Cdd:pfam00082   1 GKGVVVAVLDTGIDPNHPDLSGNLDNDPSDDPEAsvdfNNEWDDPRDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  240 KIGGVRML-DGDVTDMVEAKSVSYN-PQHVHIYSASWGPDddgKTVDGPAPLTRQAFENGvrmGRRGLGSVFVWASGNGG 317
Cdd:pfam00082  81 KILGVRVFgDGGGTDAITAQAISWAiPQGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  318 RSKDHCSCDGY-TNSIYTISISSTaesgkkpwylEECSSTLATTYSS----------------GESY-------DKKIIT 373
Cdd:pfam00082 155 PGGNNGSSVGYpAQYKNVIAVGAV----------DEASEGNLASFSSygptldgrlkpdivapGGNItggnissTLLTTT 224
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 253314509  374 TDLRQRCTDNHTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSRAGHLNAndwktnaagfkVSHLYGFG 447
Cdd:pfam00082 225 SDPPNQGYDSMSGTSMATPHVAGAAALLKQAYPNLTPETLKALLVNTATDLGDAG-----------LDRLFGYG 287
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
507-597 4.69e-39

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 139.33  E-value: 4.69e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  507 LEHVVVRITITHPRRGDLAIYLTSPSGTRSQLLANRLFDHSMEGFKNWEFMTIHCWGERAAGDWVLEVYDTpsqlrNFKT 586
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTLEVTDT-----APGD 75
                          90
                  ....*....|.
gi 253314509  587 PGKLKEWSLVL 597
Cdd:pfam01483  76 TGTLNSWQLTL 86
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
40-116 3.12e-37

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 133.88  E-value: 3.12e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 253314509   40 HWAVKIAGGFAEADRIASKYGFINVGQIGALKDYYHFYHSRTIKRSVLSSRGTHSFISMEPKVEWIQQQVVKKRTKR 116
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGLEDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
156-422 1.32e-34

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 138.31  E-value: 1.32e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 156 GAWKRGYTGKNIVVTILDDGIERTHPDLMQNYDALASCdVNGNDldpmpryDASNENKHGTRCAGEVAATANNSHCTVGI 235
Cdd:COG1404  100 GSSAAGLTGAGVTVAVIDTGVDADHPDLAGRVVGGYDF-VDGDG-------DPSDDNGHGTHVAGIIAANGNNGGGVAGV 171
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 236 AFNAKIGGVRMLD----GDVTDMVEA--KSVSynpQHVHIYSASWGPDDDGKTvdgpaPLTRQAFENGvrmgrRGLGSVF 309
Cdd:COG1404  172 APGAKLLPVRVLDdngsGTTSDIAAAidWAAD---NGADVINLSLGGPADGYS-----DALAAAVDYA-----VDKGVLV 238
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 310 VWASGNGGRSkdhCSCDGYTNSIY-TISISSTAESGKKPWYleecSSTlattyssGESYD-----KKIITTDLRQRcTDN 383
Cdd:COG1404  239 VAAAGNSGSD---DATVSYPAAYPnVIAVGAVDANGQLASF----SNY-------GPKVDvaapgVDILSTYPGGG-YAT 303
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 253314509 384 HTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSR 422
Cdd:COG1404  304 LSGTSMAAPHVAGAAALLLSANPDLTPAQVRAILLNTAT 342
COG4935 COG4935
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ...
508-599 2.32e-18

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443962 [Multi-domain]  Cd Length: 641  Bit Score: 90.27  E-value: 2.32e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 508 EHVVVRITITHPRRGDLAIYLTSPSGTRSQLLANRLfdHSMEGFkNWEFMTIHCWGERAAGDWVLEVYDTPSQlrnfkTP 587
Cdd:COG4935  558 EDVTVTVDITHTYRGDLVITLISPDGTTVVLKNRSG--GSADNI-NATFDVANFSGESANGTWTLRVVDTAGG-----DT 629
                         90
                 ....*....|..
gi 253314509 588 GKLKEWSLVLYG 599
Cdd:COG4935  630 GTLNSWSLTFTG 641
GF_recep_IV pfam14843
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
637-746 3.06e-14

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 70.48  E-value: 3.06e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  637 PCDPECSEVGCDGPGPDHCSDCLHYyyklkNNTRICVSSCP-----PGHYhADKKRCRKCAPNCE------SCFGSHGNQ 705
Cdd:pfam14843   1 VCDPLCSSEGCWGPGPDQCLSCRNF-----SRGGTCVESCNilqgePREY-VVNSTCVPCHPECLpqngtaTCSGPGADN 74
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 253314509  706 CLSCKygYFLNeeTSSCVTQCPDGSYEDI--------KKNVCGKCSENC 746
Cdd:pfam14843  75 CTKCA--HFRD--GPHCVSSCPSGVLGENdliwkyadANGVCQPCHPNC 119
FU smart00261
Furin-like repeats;
781-825 3.28e-10

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 55.98  E-value: 3.28e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 253314509   781 GHDCQPCHRFCATCSGAGADGCINCTEGYVMEEGRCVQSCSVSYY 825
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKCVSECPPGTY 45
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
690-739 1.72e-09

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 54.06  E-value: 1.72e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 253314509 690 KCAPNCESCFGSHGNQCLSCKYGYFLNEETssCVTQCPDGSYEDIKKNVC 739
Cdd:cd00064    1 PCHPSCATCTGPGPDQCTSCRHGFYLDGGT--CVSECPEGTYADTEGGVC 48
PTZ00262 PTZ00262
subtilisin-like protease; Provisional
169-413 2.02e-09

subtilisin-like protease; Provisional


Pssm-ID: 240338 [Multi-domain]  Cd Length: 639  Bit Score: 61.14  E-value: 2.02e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 169 VTILDDGIERTHPDLMQNY---------------------DALASCDVNGNDLDPMprydasNENKHGTRCAGEVAATAN 227
Cdd:PTZ00262 320 ICVIDSGIDYNHPDLHDNIdvnvkelhgrkgidddnngnvDDEYGANFVNNDGGPM------DDNYHGTHVSGIISAIGN 393
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 228 NSHCTVGIAFNAKIGGVRMLD----GDVTDMVeaKSVSY-NPQHVHIYSASWGPDDDGKTvdgpapltrqaFENGVRMGR 302
Cdd:PTZ00262 394 NNIGIVGVDKRSKLIICKALDshklGRLGDMF--KCFDYcISREAHMINGSFSFDEYSGI-----------FNESVKYLE 460
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 303 RgLGSVFVWASGN----GGRSKDHCSCDGYTNSIYTISISSTAES---------GKKPWYLEECSSTLATTYSSGESYDK 369
Cdd:PTZ00262 461 E-KGILFVVSASNcshtKESKPDIPKCDLDVNKVYPPILSKKLRNvitvsnlikDKNNQYSLSPNSFYSAKYCQLAAPGT 539
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 253314509 370 KIITTDLRQRCTDNhTGTSASAPMAAGIIALALEANPFLTWRDV 413
Cdd:PTZ00262 540 NIYSTFPKNSYRKL-NGTSMAAPHVAAIASLILSINPSLSYEEV 582
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
786-827 3.94e-09

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 53.29  E-value: 3.94e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 253314509 786 PCHRFCATCSGAGADGCINCTEGYVMEEGRCVQSCSVSYYLD 827
Cdd:cd00064    1 PCHPSCATCTGPGPDQCTSCRHGFYLDGGTCVSECPEGTYAD 42
FU smart00261
Furin-like repeats;
685-731 2.21e-08

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 50.97  E-value: 2.21e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 253314509   685 KKRCRKCAPNCESCFGSHGNQCLSCKYGYFLNEETssCVTQCPDGSY 731
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLDGGK--CVSECPPGTY 45
FU smart00261
Furin-like repeats;
835-869 2.63e-07

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 47.89  E-value: 2.63e-07
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 253314509   835 KSCKRCDNSCLTCNGPGFKNCSSCPSGYLLDLGTC 869
Cdd:smart00261   2 GECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKC 36
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
840-869 5.86e-06

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 44.05  E-value: 5.86e-06
                         10        20        30
                 ....*....|....*....|....*....|
gi 253314509 840 CDNSCLTCNGPGFKNCSSCPSGYLLDLGTC 869
Cdd:cd00064    2 CHPSCATCTGPGPDQCTSCRHGFYLDGGTC 31
GF_recep_IV pfam14843
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
786-858 3.38e-05

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 44.29  E-value: 3.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  786 PCHRFC--ATCSGAGADGCINCTegYVMEEGRCVQSCSVSYYLDHSSEGGyKSCKRCDNSCL------TCNGPGFKNCSS 857
Cdd:pfam14843   1 VCDPLCssEGCWGPGPDQCLSCR--NFSRGGTCVESCNILQGEPREYVVN-STCVPCHPECLpqngtaTCSGPGADNCTK 77

                  .
gi 253314509  858 C 858
Cdd:pfam14843  78 C 78
PLAC pfam08686
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short ...
875-912 7.03e-05

PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short six-cysteine region that is usually found at the C terminal of proteins. It is found in a range of proteins including PACE4 (paired basic amino acid cleaving enzyme 4) and the extracellular matrix protein lacunin.


Pssm-ID: 462560  Cd Length: 31  Bit Score: 40.60  E-value: 7.03e-05
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 253314509  875 CKDATeeswaegGFCMLVKKNNLCQRKVLQQLCCKTCT 912
Cdd:pfam08686   1 CKDKF-------ANCSLVVQARLCSHKYYRQFCCRSCS 31
FU smart00261
Furin-like repeats;
736-778 9.81e-05

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 40.57  E-value: 9.81e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 253314509   736 KNVCGKCSENCKACIG--FHNCTECKGGLSLQGSRCSVTCEDGQF 778
Cdd:smart00261   1 DGECKPCHPECATCTGpgPDDCTSCKHGFFLDGGKCVSECPPGTY 45
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
741-780 1.35e-03

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 37.50  E-value: 1.35e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 253314509 741 KCSENCKACIG--FHNCTECKGGLSLQGSRCSVTCEDGQFFN 780
Cdd:cd00064    1 PCHPSCATCTGpgPDQCTSCRHGFYLDGGTCVSECPEGTYAD 42
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
128-422 1.45e-165

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 484.37  E-value: 1.45e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 128 FNDPKWPSMWYMHCSD-NTHPCQSDMNIEGAWKRGYTGKNIVVTILDDGIERTHPDLMQNYDALASCDVNGNDLDPMPRY 206
Cdd:cd04059    1 PNDPLFPYQWYLKNTGqAGGTPGLDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 207 DasNENKHGTRCAGEVAATANNSHCTVGIAFNAKIGGVRMLDGDVTDMVEAKSVSYNPQHVHIYSASWGPDDDGKTVDGP 286
Cdd:cd04059   81 D--DDNSHGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 287 APLTRQAFENGVRMGRRGLGSVFVWASGNGGRSKDHCSCDGYTNSIYTISISSTAESGKKPWYLEECSSTLATTYSSGE- 365
Cdd:cd04059  159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGGSg 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 253314509 366 SYDKKIITTDLR--QRCTDNHTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSR 422
Cdd:cd04059  239 NPEASIVTTDLGgnCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
164-447 1.56e-66

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 224.26  E-value: 1.56e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  164 GKNIVVTILDDGIERTHPDLMQNYDALASCDVNG----NDLDPMPRYDASNENKHGTRCAGEVAATANNSHCTVGIAFNA 239
Cdd:pfam00082   1 GKGVVVAVLDTGIDPNHPDLSGNLDNDPSDDPEAsvdfNNEWDDPRDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  240 KIGGVRML-DGDVTDMVEAKSVSYN-PQHVHIYSASWGPDddgKTVDGPAPLTRQAFENGvrmGRRGLGSVFVWASGNGG 317
Cdd:pfam00082  81 KILGVRVFgDGGGTDAITAQAISWAiPQGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  318 RSKDHCSCDGY-TNSIYTISISSTaesgkkpwylEECSSTLATTYSS----------------GESY-------DKKIIT 373
Cdd:pfam00082 155 PGGNNGSSVGYpAQYKNVIAVGAV----------DEASEGNLASFSSygptldgrlkpdivapGGNItggnissTLLTTT 224
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 253314509  374 TDLRQRCTDNHTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSRAGHLNAndwktnaagfkVSHLYGFG 447
Cdd:pfam00082 225 SDPPNQGYDSMSGTSMATPHVAGAAALLKQAYPNLTPETLKALLVNTATDLGDAG-----------LDRLFGYG 287
P_proprotein pfam01483
Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein ...
507-597 4.69e-39

Proprotein convertase P-domain; A unique feature of the eukaryotic subtilisin-like proprotein convertases is the presence of an additional highly conserved sequence of approximately 150 residues (P domain) located immediately downstream of the catalytic domain.


Pssm-ID: 460225 [Multi-domain]  Cd Length: 86  Bit Score: 139.33  E-value: 4.69e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  507 LEHVVVRITITHPRRGDLAIYLTSPSGTRSQLLANRLFDHSMEGFKNWEFMTIHCWGERAAGDWVLEVYDTpsqlrNFKT 586
Cdd:pfam01483   1 LEHVQVSVNITHTRRGDLRITLTSPSGTRSVLLNRRGGDTSSAGFLDWTFMSVHHWGERAEGTWTLEVTDT-----APGD 75
                          90
                  ....*....|.
gi 253314509  587 PGKLKEWSLVL 597
Cdd:pfam01483  76 TGTLNSWQLTL 86
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
40-116 3.12e-37

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 133.88  E-value: 3.12e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 253314509   40 HWAVKIAGGFAEADRIASKYGFINVGQIGALKDYYHFYHSRTIKRSVLSSRGTHSFISMEPKVEWIQQQVVKKRTKR 116
Cdd:pfam16470   1 EWAVHLEGGPEEADRIAEKHGFINLGQIGGLEDYYHFRHRRVSKRSKRSLRHKHSRLKKDPKVKWAEQQRGKKRVKR 77
Peptidases_S8_15 cd07498
Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the ...
167-420 5.65e-35

Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173822 [Multi-domain]  Cd Length: 242  Bit Score: 133.62  E-value: 5.65e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 167 IVVTILDDGIERTHPDLMQNYDALASCDVNGNDLDPmprydaSNENKHGTRCAGEVAATANNSHCTVGIAFNAKIGGVRM 246
Cdd:cd07498    1 VVVAIIDTGVDLNHPDLSGKPKLVPGWNFVSNNDPT------SDIDGHGTACAGVAAAVGNNGLGVAGVAPGAKLMPVRI 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 247 LDGD--VTDMVEAKSVSYNPQH-VHIYSASWGPDDdgktvdgPAPLTRQAFENGVRMGRRGLGSVFVWASGNGGRSKDhc 323
Cdd:cd07498   75 ADSLgyAYWSDIAQAITWAADNgADVISNSWGGSD-------STESISSAIDNAATYGRNGKGGVVLFAAGNSGRSVS-- 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 324 scDGYTNSIYTISISSTAESGKKPWY--------LEECSSTLATTYSSGESydkkiiTTDLRQRCTDNHTGTSASAPMAA 395
Cdd:cd07498  146 --SGYAANPSVIAVAATDSNDARASYsnygnyvdLVAPGVGIWTTGTGRGS------AGDYPGGGYGSFSGTSFASPVAA 217
                        250       260
                 ....*....|....*....|....*
gi 253314509 396 GIIALALEANPFLTWRDVQHVIVRT 420
Cdd:cd07498  218 GVAALILSANPNLTPAEVEDILTST 242
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
156-422 1.32e-34

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 138.31  E-value: 1.32e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 156 GAWKRGYTGKNIVVTILDDGIERTHPDLMQNYDALASCdVNGNDldpmpryDASNENKHGTRCAGEVAATANNSHCTVGI 235
Cdd:COG1404  100 GSSAAGLTGAGVTVAVIDTGVDADHPDLAGRVVGGYDF-VDGDG-------DPSDDNGHGTHVAGIIAANGNNGGGVAGV 171
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 236 AFNAKIGGVRMLD----GDVTDMVEA--KSVSynpQHVHIYSASWGPDDDGKTvdgpaPLTRQAFENGvrmgrRGLGSVF 309
Cdd:COG1404  172 APGAKLLPVRVLDdngsGTTSDIAAAidWAAD---NGADVINLSLGGPADGYS-----DALAAAVDYA-----VDKGVLV 238
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 310 VWASGNGGRSkdhCSCDGYTNSIY-TISISSTAESGKKPWYleecSSTlattyssGESYD-----KKIITTDLRQRcTDN 383
Cdd:COG1404  239 VAAAGNSGSD---DATVSYPAAYPnVIAVGAVDANGQLASF----SNY-------GPKVDvaapgVDILSTYPGGG-YAT 303
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 253314509 384 HTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSR 422
Cdd:COG1404  304 LSGTSMAAPHVAGAAALLLSANPDLTPAQVRAILLNTAT 342
Peptidases_S8_S53 cd00306
Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and ...
167-420 3.32e-30

Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173787 [Multi-domain]  Cd Length: 241  Bit Score: 120.00  E-value: 3.32e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 167 IVVTILDDGIERTHPDLmqnyDALASCDVNGNDLDPMPRY--DASNENKHGTRCAGEVAATANNSHCtVGIAFNAKIGGV 244
Cdd:cd00306    1 VTVAVIDTGVDPDHPDL----DGLFGGGDGGNDDDDNENGptDPDDGNGHGTHVAGIIAASANNGGG-VGVAPGAKLIPV 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 245 RMLD----GDVTDMVEAKSVSYNPQHVHIYSASWGPDDDGktvdgPAPLTRQAFENGVRMgrrgLGSVFVWASGNGGRSK 320
Cdd:cd00306   76 KVLDgdgsGSSSDIAAAIDYAAADQGADVINLSLGGPGSP-----PSSALSEAIDYALAK----LGVLVVAAAGNDGPDG 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 321 DHCScDGYTNSIYTISISSTAESGKKPWYLEeCSSTLATTYSSGESYdkkIITTDLRQRCTDNHTGTSASAPMAAGIIAL 400
Cdd:cd00306  147 GTNI-GYPAASPNVIAVGAVDRDGTPASPSS-NGGAGVDIAAPGGDI---LSSPTTGGGGYATLSGTSMAAPIVAGVAAL 221
                        250       260
                 ....*....|....*....|
gi 253314509 401 ALEANPFLTWRDVQHVIVRT 420
Cdd:cd00306  222 LLSANPDLTPAQVKAALLST 241
Peptidases_S8_Subtilisin_like cd07473
Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the ...
165-422 1.23e-26

Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173799 [Multi-domain]  Cd Length: 259  Bit Score: 109.98  E-value: 1.23e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 165 KNIVVTILDDGIERTHPDLMQNY--DALASC-------------DVNG-----NDLDPMPrydasnENKHGTRCAGEVAA 224
Cdd:cd07473    2 GDVVVAVIDTGVDYNHPDLKDNMwvNPGEIPgngidddgngyvdDIYGwnfvnNDNDPMD------DNGHGTHVAGIIGA 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 225 TANNSHCTVGIAFNAKIGGVRMLD----GDVTDMVEA--KSVSYNpqhVHIYSASWGPdddgktvDGPAPLTRQAFEngv 298
Cdd:cd07473   76 VGNNGIGIAGVAWNVKIMPLKFLGadgsGTTSDAIKAidYAVDMG---AKIINNSWGG-------GGPSQALRDAIA--- 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 299 RMGRRGLgsVFVWASGNGGRSKDH-----CScdgYTNSiYTISISSTAESGKKPWYleecSSTLATT---YSSGESydkk 370
Cdd:cd07473  143 RAIDAGI--LFVAAAGNDGTNNDKtptypAS---YDLD-NIISVAATDSNDALASF----SNYGKKTvdlAAPGVD---- 208
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 253314509 371 IITTDLRQRcTDNHTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSR 422
Cdd:cd07473  209 ILSTSPGGG-YGYMSGTSMATPHVAGAAALLLSLNPNLTAAQIKDAILSSAD 259
Peptidases_S8_Thermitase_like cd07484
Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, ...
129-422 9.09e-22

Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173810 [Multi-domain]  Cd Length: 260  Bit Score: 95.79  E-value: 9.09e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 129 NDPKWPSMWYMHcsdnthpcqsDMNIEGAWKRGyTGKNIVVTILDDGIERTHPDLM-----QNYDAlascdVNGNDldpm 203
Cdd:cd07484    3 NDPYYSYQWNLD----------QIGAPKAWDIT-GGSGVTVAVVDTGVDPTHPDLLkvkfvLGYDF-----VDNDS---- 62
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 204 pryDASNENKHGTRCAGEVAATANNSHCTVGIAFNAKIGGVRMLD----GDVTDMVEAksvsynpqhvhIYsasWGPDDD 279
Cdd:cd07484   63 ---DAMDDNGHGTHVAGIIAAATNNGTGVAGVAPKAKIMPVKVLDangsGSLADIANG-----------IR---YAADKG 125
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 280 GKTVD---GpAPLTRQAFENGVRMGRRGlGSVFVWASGNGGRSKdhCScdgYTNSI-YTISISSTAESGKKPWYleecss 355
Cdd:cd07484  126 AKVINlslG-GGLGSTALQEAINYAWNK-GVVVVAAAGNEGVSS--VS---YPAAYpGAIAVAATDQDDKRASF------ 192
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 253314509 356 tlaTTYSS-------GESydkkIITTDLRQRcTDNHTGTSASAPMAAGIIALALEANPfLTWRDVQHVIVRTSR 422
Cdd:cd07484  193 ---SNYGKwvdvsapGGG----ILSTTPDGD-YAYMSGTSMATPHVAGVAALLYSQGP-LSASEVRDALKKTAD 257
Peptidases_S8_Autotransporter_serine_protease_like cd04848
Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine ...
163-422 1.24e-21

Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.


Pssm-ID: 173794 [Multi-domain]  Cd Length: 267  Bit Score: 95.47  E-value: 1.24e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 163 TGKNIVVTILDDGIERTHPDLMQNYDALAScdvNGNDLDPMPRYDASNENkHGTRCAGEVAATANNSHcTVGIAFNAKIG 242
Cdd:cd04848    1 TGAGVKVGVIDSGIDLSHPEFAGRVSEASY---YVAVNDAGYASNGDGDS-HGTHVAGVIAAARDGGG-MHGVAPDATLY 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 243 GVRMLDGDVTdmveAKSVSYNPQH--------VHIYSASWGPDDDGKTVDGPAPL---TRQAFENGVRMGRRGLGSVFVW 311
Cdd:cd04848   76 SARASASAGS----TFSDADIAAAydflaasgVRIINNSWGGNPAIDTVSTTYKGsaaTQGNTLLAALARAANAGGLFVF 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 312 ASGNGGRSKDhcscDGYTNSIY--------------------TISISSTAESGK--KPWYLeecsST-----LATTYSSG 364
Cdd:cd04848  152 AAGNDGQANP----SLAAAALPylepeleggwiavvavdpngTIASYSYSNRCGvaANWCL----AApgeniYSTDPDGG 223
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 253314509 365 ESYDKKIittdlrqrctdnhtGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSR 422
Cdd:cd04848  224 NGYGRVS--------------GTSFAAPHVSGAAALLAQKFPWLTADQVRQTLLTTAT 267
Peptidases_S8_13 cd07496
Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the ...
166-409 8.58e-21

Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173820 [Multi-domain]  Cd Length: 285  Bit Score: 93.51  E-value: 8.58e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 166 NIVVTILDDGIeRTHPDLMQN-----YD----ALASCDVNGNDLDP----------------MPRYDASNENKHGTRCAG 220
Cdd:cd07496    1 GVVVAVLDTGV-LFHHPDLAGvllpgYDfisdPAIANDGDGRDSDPtdpgdwvtgddvppggFCGSGVSPSSWHGTHVAG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 221 EVAATANNSHCTVGIAFNAKIGGVRML---DGDVTDMVEA---------KSVSYNPQHVHIYSASWGPDddgktvdGPAP 288
Cdd:cd07496   80 TIAAVTNNGVGVAGVAWGARILPVRVLgkcGGTLSDIVDGmrwaaglpvPGVPVNPNPAKVINLSLGGD-------GACS 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 289 LTRQAFENGVRmgrrGLGSVFVWASGNGGRSKDH---CSCDGytnsiyTISISSTAESGKKPWYLE------------EC 353
Cdd:cd07496  153 ATMQNAINDVR----ARGVLVVVAAGNEGSSASVdapANCRG------VIAVGATDLRGQRASYSNygpavdvsapggDC 222
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 253314509 354 SSTL---------ATTYSSGE-SYDkkiittdlrqrctdNHTGTSASAPMAAGIIALALEANPFLT 409
Cdd:cd07496  223 ASDVngdgypdsnTGTTSPGGsTYG--------------FLQGTSMAAPHVAGVAALMKSVNPSLT 274
Peptidases_S8_Fervidolysin_like cd07485
Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans ...
157-406 3.15e-19

Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173811 [Multi-domain]  Cd Length: 273  Bit Score: 88.70  E-value: 3.15e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 157 AWKRGYTGKNIVVTILDDGIERTHPDLMQNYDALA-SCDVNGNDLDPMPRYDA---SNENKHGTRCAGEVAATANNSHCT 232
Cdd:cd07485    2 AWEFGTGGPGIIVAVVDTGVDGTHPDLQGNGDGDGyDPAVNGYNFVPNVGDIDndvSVGGGHGTHVAGTIAAVNNNGGGV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 233 VGIAFN------AKIGGVRMLDGD--VTDMVEAKSVSYNPQH-VHIYSASWGpdddGKTVDGPAPLTRQAFENGVRMGRR 303
Cdd:cd07485   82 GGIAGAggvapgVKIMSIQIFAGRyyVGDDAVAAAIVYAADNgAVILQNSWG----GTGGGIYSPLLKDAFDYFIENAGG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 304 GL--GSVFVWASGNGGRSKDH--CSCDGytnsiyTISISSTAESGKKPWYleecsSTLATTYSSGESYDKKIITTDLRQR 379
Cdd:cd07485  158 SPldGGIVVFSAGNSYTDEHRfpAAYPG------VIAVAALDTNDNKASF-----SNYGRWVDIAAPGVGTILSTVPKLD 226
                        250       260       270
                 ....*....|....*....|....*....|..
gi 253314509 380 CTDNHT-----GTSASAPMAAGIIALALEANP 406
Cdd:cd07485  227 GDGGGNyeylsGTSMAAPHVSGVAALVLSKFP 258
Peptidases_S8_1 cd07487
Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the ...
164-420 1.76e-18

Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173812 [Multi-domain]  Cd Length: 264  Bit Score: 86.10  E-value: 1.76e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 164 GKNIVVTILDDGIERTHPDLMQNYDALASCDVNGNDLDPMprYDasnENKHGTRCAGEVAATANNSHCTV-GIAFNAKIG 242
Cdd:cd07487    1 GKGITVAVLDTGIDAPHPDFDGRIIRFADFVNTVNGRTTP--YD---DNGHGTHVAGIIAGSGRASNGKYkGVAPGANLV 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 243 GVRMLD----GDVTDMVEAksVSY-----NPQHVHIYSASWG-PDDDGktvDGPAPLtRQAFENGVRMgrrglGSVFVWA 312
Cdd:cd07487   76 GVKVLDdsgsGSESDIIAG--IDWvvennEKYNIRVVNLSLGaPPDPS---YGEDPL-CQAVERLWDA-----GIVVVVA 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 313 SGNGGRSKDHCSCDGytNSIYTISISSTAESGKKPWYLEECSS---TL-----------ATTYSSGESYDKKIITTDLRQ 378
Cdd:cd07487  145 AGNSGPGPGTITSPG--NSPKVITVGAVDDNGPHDDGISYFSSrgpTGdgrikpdvvapGENIVSCRSPGGNPGAGVGSG 222
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 253314509 379 RCTDnhTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRT 420
Cdd:cd07487  223 YFEM--SGTSMATPHVSGAIALLLQANPILTPDEVKCILRDT 262
COG4935 COG4935
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ...
508-599 2.32e-18

Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443962 [Multi-domain]  Cd Length: 641  Bit Score: 90.27  E-value: 2.32e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 508 EHVVVRITITHPRRGDLAIYLTSPSGTRSQLLANRLfdHSMEGFkNWEFMTIHCWGERAAGDWVLEVYDTPSQlrnfkTP 587
Cdd:COG4935  558 EDVTVTVDITHTYRGDLVITLISPDGTTVVLKNRSG--GSADNI-NATFDVANFSGESANGTWTLRVVDTAGG-----DT 629
                         90
                 ....*....|..
gi 253314509 588 GKLKEWSLVLYG 599
Cdd:COG4935  630 GTLNSWSLTFTG 641
Peptidases_S8_Subtilisin_subset cd07477
Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different ...
166-420 4.64e-18

Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173803 [Multi-domain]  Cd Length: 229  Bit Score: 84.12  E-value: 4.64e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 166 NIVVTILDDGIERTHPDLMQNYdalascdVNGNDLDPMPRYDASNENKHGTRCAGEVAATANNSHcTVGIAFNAKIGGVR 245
Cdd:cd07477    1 GVKVAVIDTGIDSSHPDLKLNI-------VGGANFTGDDNNDYQDGNGHGTHVAGIIAALDNGVG-VVGVAPEADLYAVK 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 246 MLD----GDVTDMVEAKSVSYNpQHVHIYSASWGpdddgktVDGPAPLTRQAFENGVrmgRRGLgsVFVWASGNggrskd 321
Cdd:cd07477   73 VLNddgsGTYSDIIAGIEWAIE-NGMDIINMSLG-------GPSDSPALREAIKKAY---AAGI--LVVAAAGN------ 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 322 hcscDGYTNSIYT--------ISISSTAESGKKpwyleecsstlaTTYSS----------GESydkkIITTDLRQRCTDN 383
Cdd:cd07477  134 ----SGNGDSSYDypakypsvIAVGAVDSNNNR------------ASFSStgpevelaapGVD----ILSTYPNNDYAYL 193
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 253314509 384 hTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRT 420
Cdd:cd07477  194 -SGTSMATPHVAGVAALVWSKRPELTNAQVRQALNKT 229
Peptidases_S8_Kp43_protease cd04842
Peptidase S8 family domain in Kp43 proteases; Kp43 proteases are members of the peptidase S8 ...
159-404 6.80e-15

Peptidase S8 family domain in Kp43 proteases; Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases


Pssm-ID: 173791 [Multi-domain]  Cd Length: 293  Bit Score: 76.21  E-value: 6.80e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 159 KRGYTGKNIVVTILDDGIERTHPDLMqnydalascDVNGNDLDPMPR----YDASNENK-----HGTRCAGEVAATANNS 229
Cdd:cd04842    1 GLGLTGKGQIVGVADTGLDTNHCFFY---------DPNFNKTNLFHRkivrYDSLSDTKddvdgHGTHVAGIIAGKGNDS 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 230 HCTV---GIAFNAKIGGVRM------------LDGDVTDMVEAKSvsynpqhvHIYSASWGPDDDG------KTVDgpap 288
Cdd:cd04842   72 SSISlykGVAPKAKLYFQDIgdtsgnlssppdLNKLFSPMYDAGA--------RISSNSWGSPVNNgytllaRAYD---- 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 289 ltRQAFENgvrmgrRGLgsVFVWASGNGGrskdhcscDGYTNSIYTISIS-----------STAESGKKPWYLEECSSTL 357
Cdd:cd04842  140 --QFAYNN------PDI--LFVFSAGNDG--------NDGSNTIGSPATAknvltvgasnnPSVSNGEGGLGQSDNSDTV 201
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 253314509 358 ATTYSSGESYD--KK---------IITTDLRQR----CTDNH----TGTSASAPMAAGIIALALEA 404
Cdd:cd04842  202 ASFSSRGPTYDgrIKpdlvapgtgILSARSGGGgigdTSDSAytskSGTSMATPLVAGAAALLRQY 267
Peptidases_S8_subtilisin_Vpr-like cd07474
Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic ...
164-430 1.31e-14

Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173800 [Multi-domain]  Cd Length: 295  Bit Score: 75.44  E-value: 1.31e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 164 GKNIVVTILDDGIERTHPDLMQNYDALASC----DVNGNDLDPMPR---------YDASNENKHGTRCAGEVAATANNSH 230
Cdd:cd07474    1 GKGVKVAVIDTGIDYTHPDLGGPGFPNDKVkggyDFVDDDYDPMDTrpypsplgdASAGDATGHGTHVAGIIAGNGVNVG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 231 CTVGIAFNAKIGGVRMLDGD---VTDMVEA---KSVSynpQHVHIYSASWG-----PDDDGKtvdgpapltrQAFENGVR 299
Cdd:cd07474   81 TIKGVAPKADLYAYKVLGPGgsgTTDVIIAaieQAVD---DGMDVINLSLGssvngPDDPDA----------IAINNAVK 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 300 mgrrgLGSVFVWASGNGGrskDHCSCDGyTNSIYTISISSTAESGKKPWYleecSSTLATTYSSGESYDKKIITTDL--- 376
Cdd:cd07474  148 -----AGVVVVAAAGNSG---PAPYTIG-SPATAPSAITVGASTVADVAE----ADTVGPSSSRGPPTSDSAIKPDIvap 214
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 253314509 377 -------RQRCTDN---HTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTsrAGHLNAND 430
Cdd:cd07474  215 gvdimstAPGSGTGyarMSGTSMAAPHVAGAAALLKQAHPDWSPAQIKAALMNT--AKPLYDSD 276
GF_recep_IV pfam14843
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
637-746 3.06e-14

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 70.48  E-value: 3.06e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  637 PCDPECSEVGCDGPGPDHCSDCLHYyyklkNNTRICVSSCP-----PGHYhADKKRCRKCAPNCE------SCFGSHGNQ 705
Cdd:pfam14843   1 VCDPLCSSEGCWGPGPDQCLSCRNF-----SRGGTCVESCNilqgePREY-VVNSTCVPCHPECLpqngtaTCSGPGADN 74
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 253314509  706 CLSCKygYFLNeeTSSCVTQCPDGSYEDI--------KKNVCGKCSENC 746
Cdd:pfam14843  75 CTKCA--HFRD--GPHCVSSCPSGVLGENdliwkyadANGVCQPCHPNC 119
Peptidases_S8_PCSK9_ProteinaseK_like cd04077
Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of ...
162-421 1.99e-10

Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.


Pssm-ID: 173790 [Multi-domain]  Cd Length: 255  Bit Score: 62.15  E-value: 1.99e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 162 YTGKNIVVTILDDGIERTHPDLMQNydALASCDVNGNDldpmpryDASNENKHGTRCAGEVAATannshcTVGIAFNAKI 241
Cdd:cd04077   22 STGSGVDVYVLDTGIRTTHVEFGGR--AIWGADFVGGD-------PDSDCNGHGTHVAGTVGGK------TYGVAKKANL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 242 GGVRMLD----GDVTDMVEAksvsYNpqhvhiYSASWGPDDDGKTV-----DGPAPltrQAFENGV-RMGRRGLgsVFVW 311
Cdd:cd04077   87 VAVKVLDcngsGTLSGIIAG----LE------WVANDATKRGKPAVanmslGGGAS---TALDAAVaAAVNAGV--VVVV 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 312 ASGNGGRskDHCscdGYT--NSIYTISISSTAESGKKPWYLE--ECSSTLAttysSGESYDKKIITTDlrqRCTDNHTGT 387
Cdd:cd04077  152 AAGNSNQ--DAC---NYSpaSAPEAITVGATDSDDARASFSNygSCVDIFA----PGVDILSAWIGSD---TATATLSGT 219
                        250       260       270
                 ....*....|....*....|....*....|....
gi 253314509 388 SASAPMAAGIIALALEANPFLTWRDVQHVIVRTS 421
Cdd:cd04077  220 SMAAPHVAGLAAYLLSLGPDLSPAEVKARLLNLA 253
Peptidases_S8_5 cd07489
Peptidase S8 family domain, uncharacterized subfamily 5; gap in seq This family is a member of ...
160-423 2.42e-10

Peptidase S8 family domain, uncharacterized subfamily 5; gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173814 [Multi-domain]  Cd Length: 312  Bit Score: 62.62  E-value: 2.42e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 160 RGYTGKNIVVTILDDGIERTHPDL----MQNYDALASCDVNGNDLD----PMPRYDASNENKHGTRCAGEVAATANNSHC 231
Cdd:cd07489    8 EGITGKGVKVAVVDTGIDYTHPALggcfGPGCKVAGGYDFVGDDYDgtnpPVPDDDPMDCQGHGTHVAGIIAANPNAYGF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 232 TvGIAFNAKIGGVRMLD--GDVTD--MVEAKSVSYNpQHVHIYSASWGpDDDGKTVDGPAPLTRQAFENGVRM------- 300
Cdd:cd07489   88 T-GVAPEATLGAYRVFGcsGSTTEdtIIAAFLRAYE-DGADVITASLG-GPSGWSEDPWAVVASRIVDAGVVVtiaagnd 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 301 GRRGLgsvfvWASGNGGRSKDHCSCdGYTNSIYTiSISSTAESGKKPWYLEECSSTLATTYSSGESYDkkIIttdlrqrc 380
Cdd:cd07489  165 GERGP-----FYASSPASGRGVIAV-ASVDSYFS-SWGPTNELYLKPDVAAPGGNILSTYPLAGGGYA--VL-------- 227
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 253314509 381 tdnhTGTSASAPMAAGIIALALEA-NPFLTWRDVQHVIVRTSRA 423
Cdd:cd07489  228 ----SGTSMATPYVAGAAALLIQArHGKLSPAELRDLLASTAKP 267
FU smart00261
Furin-like repeats;
781-825 3.28e-10

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 55.98  E-value: 3.28e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 253314509   781 GHDCQPCHRFCATCSGAGADGCINCTEGYVMEEGRCVQSCSVSYY 825
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKCVSECPPGTY 45
Peptidases_S8_10 cd07494
Peptidase S8 family domain, uncharacterized subfamily 10; This family is a member of the ...
152-430 5.41e-10

Peptidase S8 family domain, uncharacterized subfamily 10; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173819 [Multi-domain]  Cd Length: 298  Bit Score: 61.72  E-value: 5.41e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 152 MNIEGAWKRGYTGKNIVVTILDDGIERTHPDLMQNYDALAScdvngndLDPMPRYDASNENKHGTrcaGEVAAtannshc 231
Cdd:cd07494    8 LNATRVHQRGITGRGVRVAMVDTGFYAHPFFESRGYQVRVV-------LAPGATDPACDENGHGT---GESAN------- 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 232 TVGIAFNAKIGGVRMLDGDVTDMVEA--KSVSYNPQhvhIYSASWGPD--DDGKTVDGPAPLTRQAFE----NGVrmgRR 303
Cdd:cd07494   71 LFAIAPGAQFIGVKLGGPDLVNSVGAfkKAISLSPD---IISNSWGYDlrSPGTSWSRSLPNALKALAatlqDAV---AR 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 304 GLgsVFVWASGNGGRS-----KDHCSCDG-YTNSIYTISISSTAESGKKPWY-------------LEECSSTLATTYSSG 364
Cdd:cd07494  145 GI--VVVFSAGNGGWSfpaqhPEVIAAGGvFVDEDGARRASSYASGFRSKIYpgrqvpdvcglvgMLPHAAYLMLPVPPG 222
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 253314509 365 ESYDKKIITTDLRQRCTDN---HTGTSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSRA---GHLNAND 430
Cdd:cd07494  223 SQLDRSCAAFPDGTPPNDGwgvFSGTSAAAPQVAGVCALMLQANPGLSPERARSLLNKTARDvtkGASAQGT 294
VSP pfam03302
Giardia variant-specific surface protein;
674-869 1.02e-09

Giardia variant-specific surface protein;


Pssm-ID: 146106 [Multi-domain]  Cd Length: 397  Bit Score: 61.52  E-value: 1.02e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  674 SSCPPGH-YHADKKRCRKCAP----NCESCFGSHGNQCLSCKYGYFLNEeTSSCVTQCpdgsyEDIKKNVCGKCSEN--- 745
Cdd:pfam03302   2 DECKPGYeLSADKTKCTSSAPckteNCKACSNDKREVCEECNSNNYLTP-TSQCIDDC-----AKIGNYYYTTNANNkki 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  746 CKACiGFHNCTECKGGLSLQgsrcsvTCEDGQFFNGHDCQPCHRFCATCSGAGADGCINCTEGYVME------EGRCVQS 819
Cdd:pfam03302  76 CKEC-TVANCKTCEDQGQCQ------ACNDGFYKSGDACSPCHESCKTCSGGTASDCTECLTGKALRygndgtKGTCGEG 148
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 253314509  820 CSVSYYLDHSSE-----GGYKSCKRCDNS----------------CLTCNGPGFKN--CSSCPSGYLLDLGTC 869
Cdd:pfam03302 149 CTTGTGAGACKTcgltiDGTSYCSECATEteypqngvctstaaraTATCKASSVANgmCSSCANGYFRMNGGC 221
Peptidases_S8_6 cd07490
Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the ...
169-422 1.23e-09

Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173815 [Multi-domain]  Cd Length: 254  Bit Score: 59.87  E-value: 1.23e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 169 VTILDDGIERTHPDLMQNYDALASCDVNGNDLDPmpryDASNENKHGTRCAGEVAATANNSHcTVGIAFNAKiggvrMLD 248
Cdd:cd07490    4 VAVLDTGVDADHPDLAGRVAQWADFDENRRISAT----EVFDAGGHGTHVSGTIGGGGAKGV-YIGVAPEAD-----LLH 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 249 GDVTDMVEAksvsynPQHVHIYSASWGPDDDGKTV-------DGPAPLTRQAFEngvrMGRRGLGSVFVWASGNGGRSKD 321
Cdd:cd07490   74 GKVLDDGGG------SLSQIIAGMEWAVEKDADVVsmslggtYYSEDPLEEAVE----ALSNQTGALFVVSAGNEGHGTS 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 322 HCSCDGYTnsiyTISISSTAESGKKPWYlEECSSTLATTYSSGESYDKKIITTDL-----------RQRCTDNH----TG 386
Cdd:cd07490  144 GSPGSAYA----ALSVGAVDRDDEDAWF-SSFGSSGASLVSAPDSPPDEYTKPDVaapgvdvysarQGANGDGQytrlSG 218
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 253314509 387 TSASAPMAAGIIALALEANPFLTWRDVQHVIVRTSR 422
Cdd:cd07490  219 TSMAAPHVAGVAALLAAAHPDLSPEQIKDALTETAY 254
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
690-739 1.72e-09

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 54.06  E-value: 1.72e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 253314509 690 KCAPNCESCFGSHGNQCLSCKYGYFLNEETssCVTQCPDGSYEDIKKNVC 739
Cdd:cd00064    1 PCHPSCATCTGPGPDQCTSCRHGFYLDGGT--CVSECPEGTYADTEGGVC 48
PTZ00262 PTZ00262
subtilisin-like protease; Provisional
169-413 2.02e-09

subtilisin-like protease; Provisional


Pssm-ID: 240338 [Multi-domain]  Cd Length: 639  Bit Score: 61.14  E-value: 2.02e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 169 VTILDDGIERTHPDLMQNY---------------------DALASCDVNGNDLDPMprydasNENKHGTRCAGEVAATAN 227
Cdd:PTZ00262 320 ICVIDSGIDYNHPDLHDNIdvnvkelhgrkgidddnngnvDDEYGANFVNNDGGPM------DDNYHGTHVSGIISAIGN 393
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 228 NSHCTVGIAFNAKIGGVRMLD----GDVTDMVeaKSVSY-NPQHVHIYSASWGPDDDGKTvdgpapltrqaFENGVRMGR 302
Cdd:PTZ00262 394 NNIGIVGVDKRSKLIICKALDshklGRLGDMF--KCFDYcISREAHMINGSFSFDEYSGI-----------FNESVKYLE 460
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 303 RgLGSVFVWASGN----GGRSKDHCSCDGYTNSIYTISISSTAES---------GKKPWYLEECSSTLATTYSSGESYDK 369
Cdd:PTZ00262 461 E-KGILFVVSASNcshtKESKPDIPKCDLDVNKVYPPILSKKLRNvitvsnlikDKNNQYSLSPNSFYSAKYCQLAAPGT 539
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 253314509 370 KIITTDLRQRCTDNhTGTSASAPMAAGIIALALEANPFLTWRDV 413
Cdd:PTZ00262 540 NIYSTFPKNSYRKL-NGTSMAAPHVAAIASLILSINPSLSYEEV 582
Furin-like pfam00757
Furin-like cysteine rich region;
638-746 2.96e-09

Furin-like cysteine rich region;


Pssm-ID: 395614 [Multi-domain]  Cd Length: 143  Bit Score: 56.29  E-value: 2.96e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  638 CDPECSEvGCDGPGPDHCSDCLHYYYklknnTRICVSSCPPGHYHADkkrcRKCApNCESCFGSHGNQClsckygYFLNE 717
Cdd:pfam00757  49 CHEQCLG-GCTGPNDSDCLACRHFND-----EGTCVDQCPPGTYQFG----WRCV-TFKECPKSHLPGY------NPLVI 111
                          90       100       110
                  ....*....|....*....|....*....|
gi 253314509  718 ETSSCVTQCPDGSYEDIKKNV-CGKCSENC 746
Cdd:pfam00757 112 HNGECVRECPSGYTEVENNSRkCEPCEGLC 141
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
786-827 3.94e-09

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 53.29  E-value: 3.94e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 253314509 786 PCHRFCATCSGAGADGCINCTEGYVMEEGRCVQSCSVSYYLD 827
Cdd:cd00064    1 PCHPSCATCTGPGPDQCTSCRHGFYLDGGTCVSECPEGTYAD 42
Peptidases_S53 cd04056
Peptidase domain in the S53 family; Members of the peptidases S53 (sedolisin) family include ...
161-405 7.70e-09

Peptidase domain in the S53 family; Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.


Pssm-ID: 173788 [Multi-domain]  Cd Length: 361  Bit Score: 58.48  E-value: 7.70e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 161 GYTGKNIVVTILDDGIERTHPDLMQNYDAL------ASCDVNGNDLDPMPRYDASNenkhgtrcAGEVA---ATAnnshc 231
Cdd:cd04056   17 GYTGSGQTIGIIEFGGGYYNPSDLQTFFQLfglpapTVFIVVVIGGGNAPGTSSGW--------GGEASldvEYA----- 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 232 tVGIAFNAKI----GGVRMLDGDVTDMVEAksVSYNPQHVHIYSASWGpDDDGKTVDGPAPLTRQAFENGVRMGRrglgS 307
Cdd:cd04056   84 -GAIAPGANItlyfAPGTVTNGPLLAFLAA--VLDNPNLPSVISISYG-EPEQSLPPAYAQRVCNLFAQAAAQGI----T 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 308 VFVwASGNGGRSKDHCSCDGYTNSIYTISIS---------STAESGKKPWYLEECSSTLATTYSSG---------ESYDK 369
Cdd:cd04056  156 VLA-ASGDSGAGGCGGDGSGTGFSVSFPASSpyvtavggtTLYTGGTGSSAESTVWSSEGGWGGSGggfsnyfprPSYQS 234
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 253314509 370 KIITTDLRQ-------R-----------------CTDNHT----GTSASAPMAAGIIALALEAN 405
Cdd:cd04056  235 GAVLGLPPSglyngsgRgvpdvaanadpgtgylvVVNGQWylvgGTSAAAPLFAGLIALINQAR 298
Furin-like_2 pfam15913
Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a ...
671-729 1.62e-08

Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a variety of proteins from eukaryotes that are involved in the mechanism of signal transduction by receptor tyrosine kinases, which involves receptor aggregation.


Pssm-ID: 464939 [Multi-domain]  Cd Length: 102  Bit Score: 53.20  E-value: 1.62e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 253314509  671 ICVSSCPPGHY---HADKKRCRKC-APNCESCFGShgNQCLSCKYGYFLNEetSSCVTQCPDG 729
Cdd:pfam15913  34 VCLHSCPPGYFgirGQEVNRCTKCkAENCESCFSK--DFCTKCKEGFYLHK--GKCLDTCPEG 92
Peptidases_S8_12 cd07480
Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the ...
162-315 1.80e-08

Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173806 [Multi-domain]  Cd Length: 297  Bit Score: 57.00  E-value: 1.80e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 162 YTGKNIVVTILDDGIERTHPDLMqnydalascDVNGNDLDPMPRYDASNENKHGTRCAGEVAATANNSHcTVGIAFNAKI 241
Cdd:cd07480    5 FTGAGVRVAVLDTGIDLTHPAFA---------GRDITTKSFVGGEDVQDGHGHGTHCAGTIFGRDVPGP-RYGVARGAEI 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 242 --GGVRMLDGDVTDMVEAKSVSYNPQH-VHIYSASWGPDDDGKTVDG--PAPLTRQAFE----------NGVRMGRR--- 303
Cdd:cd07480   75 alIGKVLGDGGGGDGGILAGIQWAVANgADVISMSLGADFPGLVDQGwpPGLAFSRALEayrqrarlfdALMTLVAAqaa 154
                        170
                 ....*....|...
gi 253314509 304 -GLGSVFVWASGN 315
Cdd:cd07480  155 lARGTLIVAAAGN 167
FU smart00261
Furin-like repeats;
685-731 2.21e-08

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 50.97  E-value: 2.21e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 253314509   685 KKRCRKCAPNCESCFGSHGNQCLSCKYGYFLNEETssCVTQCPDGSY 731
Cdd:smart00261   1 DGECKPCHPECATCTGPGPDDCTSCKHGFFLDGGK--CVSECPPGTY 45
PTZ00214 PTZ00214
high cysteine membrane protein Group 4; Provisional
634-864 3.94e-08

high cysteine membrane protein Group 4; Provisional


Pssm-ID: 173479 [Multi-domain]  Cd Length: 800  Bit Score: 57.23  E-value: 3.94e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 634 YAGPCDPECSEvGCDGPGPDHCSDCLHYYYKLKNNTRiCVssCPPGHYHADKKrCRKCAPNCESCFGSHGNQCLSCKYGY 713
Cdd:PTZ00214 383 YLGVDGKSCSE-SCSGDTRGVCTKVAEGSESTEVSCR-CV--CKPTFYNSSGT-CTPCTDSCAVCKDGTPTGCQQCSPGK 457
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 714 FLN-----EETSSCVTQCPDGSyedikknvcgkcsenckacigfhNCTECkgGLSLQGSRCSVTCEDGQF--FNGHdCQP 786
Cdd:PTZ00214 458 ILEfsivsSESADCVDQCSVGS-----------------------ECAEC--GITIDGSRYCTRCKDASTypFNGV-CIP 511
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 787 CHRFCATCSGAGADGCINCTEGYVMEEGRCVQSCSV--SYYLDHSSEGGYKSCKR------------CDNSCLTCNGPGF 852
Cdd:PTZ00214 512 NTQRDAYCTSTANGACTTCSGAAFLMNGGCYTTEHYpgSTICDKQSNGKCTTTKKgygispdgklleCDPTCLACTAPGP 591
                        250
                 ....*....|..
gi 253314509 853 KNCSSCPSGYLL 864
Cdd:PTZ00214 592 GRCTRCPSDKLL 603
VSP pfam03302
Giardia variant-specific surface protein;
635-869 7.63e-08

Giardia variant-specific surface protein;


Pssm-ID: 146106 [Multi-domain]  Cd Length: 397  Bit Score: 55.75  E-value: 7.63e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  635 AGPCDPECSEVgCDGPGPDHCSDCLHYYYKlkNNTRICVSSCPP-GHYHA-----DKKRCRKCAP-NCESCfgSHGNQCL 707
Cdd:pfam03302  20 SAPCKTENCKA-CSNDKREVCEECNSNNYL--TPTSQCIDDCAKiGNYYYttnanNKKICKECTVaNCKTC--EDQGQCQ 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  708 SCKYGYFLNEETSSCVTQ----CPDGSYEDIKKNVCGK------------CSENCKACIGFHNCTECkgGLSLQG----S 767
Cdd:pfam03302  95 ACNDGFYKSGDACSPCHEscktCSGGTASDCTECLTGKalrygndgtkgtCGEGCTTGTGAGACKTC--GLTIDGtsycS 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  768 RCSVTCEDGQffNGHDCQPCHRFCATC-SGAGADG-CINCTEGYVMEEGRCVQSCSVSYYLDHSSEGGYKSCK------R 839
Cdd:pfam03302 173 ECATETEYPQ--NGVCTSTAARATATCkASSVANGmCSSCANGYFRMNGGCYETTKFPGKSVCEEANSGGTCQkeapgyK 250
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 253314509  840 CDNSCLTCNGPGFKNCSS------CPSGYLLDLGTC 869
Cdd:pfam03302 251 LNNGDLVTCSPGCKTCTSntvcttCMDGYVKTSDSC 286
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
637-689 1.12e-07

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 49.05  E-value: 1.12e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 253314509 637 PCDPECSevGCDGPGPDHCSDCLHYYYklkNNTRICVSSCPPGHYH-ADKKRCR 689
Cdd:cd00064    1 PCHPSCA--TCTGPGPDQCTSCRHGFY---LDGGTCVSECPEGTYAdTEGGVCL 49
FU smart00261
Furin-like repeats;
637-681 1.73e-07

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 48.27  E-value: 1.73e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 253314509   637 PCDPECSevGCDGPGPDHCSDCLHYYYKLKNntrICVSSCPPGHY 681
Cdd:smart00261   6 PCHPECA--TCTGPGPDDCTSCKHGFFLDGG---KCVSECPPGTY 45
FU smart00261
Furin-like repeats;
835-869 2.63e-07

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 47.89  E-value: 2.63e-07
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 253314509   835 KSCKRCDNSCLTCNGPGFKNCSSCPSGYLLDLGTC 869
Cdd:smart00261   2 GECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKC 36
Peptidases_S8_8 cd07492
Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the ...
169-422 1.17e-06

Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173817 [Multi-domain]  Cd Length: 222  Bit Score: 50.41  E-value: 1.17e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 169 VTILDDGIERTHPDLmqnyDALASCDVNGNDLDPMPRYD-ASNENKHGTRCAGEVAATANnshctvgiafNAKIGGVRML 247
Cdd:cd07492    4 VAVIDSGVDTDHPDL----GNLALDGEVTIDLEIIVVSAeGGDKDGHGTACAGIIKKYAP----------EAEIGSIKIL 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 248 DGDVTDMVE--AKSVSY-NPQHVHIYSASWgpdddGKTVDGPAPLTRQAFENGVRMGRrglgsVFVWASGNGGRskdhcs 324
Cdd:cd07492   70 GEDGRCNSFvlEKALRAcVENDIRIVNLSL-----GGPGDRDFPLLKELLEYAYKAGG-----IIVAAAPNNND------ 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 325 cDGYTNSIYTISI---SSTAESGKKPWYLEECSSTlattyssgesyDKKIITTDLRQRCTDNHTGTSASAPMAAGIIALA 401
Cdd:cd07492  134 -IGTPPASFPNVIgvkSDTADDPKSFWYIYVEFSA-----------DGVDIIAPAPHGRYLTVSGNSFAAPHVTGMVALL 201
                        250       260
                 ....*....|....*....|.
gi 253314509 402 LEANPFLTWRDVQHVIVRTSR 422
Cdd:cd07492  202 LSEKPDIDANDLKRLLQRLAV 222
Peptidases_S8_Lantibiotic_specific_protease cd07482
Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific ...
166-409 3.45e-06

Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases; Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173808 [Multi-domain]  Cd Length: 294  Bit Score: 49.67  E-value: 3.45e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 166 NIVVTILDDGIERTHPDLMQNYdalascDVNGNDLDPMPRYDASNE------------NKHGTRCAGEVAATANNShctv 233
Cdd:cd07482    1 KVTVAVIDSGIDPDHPDLKNSI------SSYSKNLVPKGGYDGKEAgetgdindivdkLGHGTAVAGQIAANGNIK---- 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 234 GIAFNAKIGGVRMLD----GDVTDMVEAKSVSYNpQHVHIYSASWGPDDDGKTVDGPAPLTRQAFENGVRMGRRGlGSVF 309
Cdd:cd07482   71 GVAPGIGIVSYRVFGscgsAESSWIIKAIIDAAD-DGVDVINLSLGGYLIIGGEYEDDDVEYNAYKKAINYAKSK-GSIV 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 310 VWASGNGGRS-------KDHCSCDGY--TNSIY---------TISISSTAESGkkpwYLEECSS------TLAT---TYS 362
Cdd:cd07482  149 VAAAGNDGLDvsnkqelLDFLSSGDDfsVNGEVydvpaslpnVITVSATDNNG----NLSSFSNygnsriDLAApggDFL 224
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 253314509 363 SGESYDK------------KIITTDLRQrCTDNHTGTSASAPMAAGIIALALEANPFLT 409
Cdd:cd07482  225 LLDQYGKekwvnnglmtkeQILTTAPEG-GYAYMYGTSLAAPKVSGALALIIDKNPLKK 282
Furin-like_2 pfam15913
Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a ...
695-782 3.47e-06

Furin-like repeat, cysteine-rich; The furin-like cysteine rich region has been found in a variety of proteins from eukaryotes that are involved in the mechanism of signal transduction by receptor tyrosine kinases, which involves receptor aggregation.


Pssm-ID: 464939 [Multi-domain]  Cd Length: 102  Bit Score: 46.27  E-value: 3.47e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  695 CESCfgSHGNQCLSCKYGYFL------NEETSSCVTQCPDGSY--EDIKKNVCGKC-SENCKACIGFHNCTECKGGLSLQ 765
Cdd:pfam15913   4 CVLC--SEENGCLTCQPRLFLllerngIRQYGVCLHSCPPGYFgiRGQEVNRCTKCkAENCESCFSKDFCTKCKEGFYLH 81
                          90
                  ....*....|....*..
gi 253314509  766 GSRCSVTCEDGQFFNGH 782
Cdd:pfam15913  82 KGKCLDTCPEGTAAQNS 98
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
840-869 5.86e-06

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 44.05  E-value: 5.86e-06
                         10        20        30
                 ....*....|....*....|....*....|
gi 253314509 840 CDNSCLTCNGPGFKNCSSCPSGYLLDLGTC 869
Cdd:cd00064    2 CHPSCATCTGPGPDQCTSCRHGFYLDGGTC 31
Peptidases_S8_11 cd04843
Peptidase S8 family domain, uncharacterized subfamily 11; This family is a member of the ...
152-402 5.97e-06

Peptidase S8 family domain, uncharacterized subfamily 11; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173792  Cd Length: 277  Bit Score: 48.85  E-value: 5.97e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 152 MNIEGAWKR-GYTGKNIVVTILDDGIERTHPDLMQNydaLAScdvngndldPMPRYDASNENKHGTRCAGEVAATANNSH 230
Cdd:cd04843    2 INARYAWTKpGGSGQGVTFVDIEQGWNLNHEDLVGN---GIT---------LISGLTDQADSDHGTAVLGIIVAKDNGIG 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 231 CTvGIAFNAKIGGV-----------------RMLDGDVTdMVEAK----SVSYNPQHVHIYSASWGPdddgktvdgpapl 289
Cdd:cd04843   70 VT-GIAHGAQAAVVsstrvsntadaildaadYLSPGDVI-LLEMQtggpNNGYPPLPVEYEQANFDA------------- 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 290 TRQAFENGVrmgrrglgsVFVWASGNGGRSKDHCS-CDGYTNSIYTISIS---------STAESGKKPWyleeCSSTLAT 359
Cdd:cd04843  135 IRTATDLGI---------IVVEAAGNGGQDLDAPVyNRGPILNRFSPDFRdsgaimvgaGSSTTGHTRL----AFSNYGS 201
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 253314509 360 ---TYSSGE-----SYDKKIITTDLRQRCTDNHTGTSASAPMAAGiiALAL 402
Cdd:cd04843  202 rvdVYGWGEnvtttGYGDLQDLGGENQDYTDSFSGTSSASPIVAG--AAAS 250
Peptidases_S53_like cd05562
Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include ...
383-455 8.56e-06

Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.


Pssm-ID: 173798 [Multi-domain]  Cd Length: 275  Bit Score: 48.44  E-value: 8.56e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 253314509 383 NHTGTSASAPMAAGIIALALEANPFLTWRDVQHVIvrTSRAGHLNANDWktnaagfkvSHLYGFGLMDAEAMV 455
Cdd:cd05562  212 NFFGTSAAAPHAAGVAALVLSANPGLTPADIRDAL--RSTALDMGEPGY---------DNASGSGLVDADRAV 273
Nar1 COG4624
Iron only hydrogenase large subunit, C-terminal domain [Energy production and conversion];
687-822 1.03e-05

Iron only hydrogenase large subunit, C-terminal domain [Energy production and conversion];


Pssm-ID: 443663 [Multi-domain]  Cd Length: 450  Bit Score: 48.87  E-value: 1.03e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 687 RCRKCAPNCESCFGSHGNQCLSCKYGYFLNEETSSCVTQCPDGSYEDIKKNVCGKCSENCKACIGFHNCTECKGGLSLQG 766
Cdd:COG4624    2 LLLLRACCCCCIEEGDELLLLEEAERVLRIIILEALLPEHVDDDSACSCCPRCCLCCCCCCRCCVAISCIQVRGIIIIDK 81
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 253314509 767 SRCSVTCEDGqffNGHDCQPCHRFCATCSGAGADG--------CINCtegyvmeeGRCVQSCSV 822
Cdd:COG4624   82 RGPSIIRDKE---KCKNCYPCVRACPVKAIKVDDGkaeideekCISC--------GQCVAVCPF 134
GF_recep_IV pfam14843
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
786-858 3.38e-05

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 44.29  E-value: 3.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  786 PCHRFC--ATCSGAGADGCINCTegYVMEEGRCVQSCSVSYYLDHSSEGGyKSCKRCDNSCL------TCNGPGFKNCSS 857
Cdd:pfam14843   1 VCDPLCssEGCWGPGPDQCLSCR--NFSRGGTCVESCNILQGEPREYVVN-STCVPCHPECLpqngtaTCSGPGADNCTK 77

                  .
gi 253314509  858 C 858
Cdd:pfam14843  78 C 78
PLAC pfam08686
PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short ...
875-912 7.03e-05

PLAC (protease and lacunin) domain; The PLAC (protease and lacunin) domain is a short six-cysteine region that is usually found at the C terminal of proteins. It is found in a range of proteins including PACE4 (paired basic amino acid cleaving enzyme 4) and the extracellular matrix protein lacunin.


Pssm-ID: 462560  Cd Length: 31  Bit Score: 40.60  E-value: 7.03e-05
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 253314509  875 CKDATeeswaegGFCMLVKKNNLCQRKVLQQLCCKTCT 912
Cdd:pfam08686   1 CKDKF-------ANCSLVVQARLCSHKYYRQFCCRSCS 31
GF_recep_IV pfam14843
Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine ...
742-855 7.51e-05

Growth factor receptor domain IV; This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (pfam00757) regulates the binding of ligands to the receptor L domains (pfam01030).


Pssm-ID: 464344 [Multi-domain]  Cd Length: 132  Bit Score: 43.52  E-value: 7.51e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509  742 CSENCKA--CIGF--HNCTECKGglSLQGSRCSVTC-----EDGQFFNGHDCQPCHRFC------ATCSGAGADGCINCT 806
Cdd:pfam14843   2 CDPLCSSegCWGPgpDQCLSCRN--FSRGGTCVESCnilqgEPREYVVNSTCVPCHPEClpqngtATCSGPGADNCTKCA 79
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 253314509  807 egYVMEEGRCVQSCSVSYYLDHSSEGGY----KSCKRCDNSC-LTCNGPGFKNC 855
Cdd:pfam14843  80 --HFRDGPHCVSSCPSGVLGENDLIWKYadanGVCQPCHPNCtQGCTGPGLTGC 131
FU smart00261
Furin-like repeats;
736-778 9.81e-05

Furin-like repeats;


Pssm-ID: 214589 [Multi-domain]  Cd Length: 45  Bit Score: 40.57  E-value: 9.81e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 253314509   736 KNVCGKCSENCKACIG--FHNCTECKGGLSLQGSRCSVTCEDGQF 778
Cdd:smart00261   1 DGECKPCHPECATCTGpgPDDCTSCKHGFFLDGGKCVSECPPGTY 45
PTZ00214 PTZ00214
high cysteine membrane protein Group 4; Provisional
712-894 8.94e-04

high cysteine membrane protein Group 4; Provisional


Pssm-ID: 173479 [Multi-domain]  Cd Length: 800  Bit Score: 42.98  E-value: 8.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 712 GYFLNEETSSCVTQCPDGSYEDiKKNVCGKCSENC---------KACIGFHN--CTECKGGLSLQGSRCSVTCEDGQFFN 780
Cdd:PTZ00214 350 GYLCGDATNGGVSGCATCGYNS-GAVTCTRCSAGYlgvdgkscsESCSGDTRgvCTKVAEGSESTEVSCRCVCKPTFYNS 428
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 781 GHDCQPCHRFCATCSGAGADGCINCTEGYVM-------EEGRCVQSCSVSyylDHSSE-----GGYKSCKRC-DNSCLTC 847
Cdd:PTZ00214 429 SGTCTPCTDSCAVCKDGTPTGCQQCSPGKILefsivssESADCVDQCSVG---SECAEcgitiDGSRYCTRCkDASTYPF 505
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 253314509 848 NGPGFKN--------------CSSCPSGYLLDLGTCQMGAICKDATEESWAEGGFCMLVKK 894
Cdd:PTZ00214 506 NGVCIPNtqrdayctstangaCTTCSGAAFLMNGGCYTTEHYPGSTICDKQSNGKCTTTKK 566
Peptidases_S8_14 cd07497
Peptidase S8 family domain, uncharacterized subfamily 14; This family is a member of the ...
164-404 1.21e-03

Peptidase S8 family domain, uncharacterized subfamily 14; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173821 [Multi-domain]  Cd Length: 311  Bit Score: 42.07  E-value: 1.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 164 GKNIVVTILDDGIERTHPDLMQ--NYDALASCDVNGN---DLDPMPRYDA--SNENKHGTRCAgEVAATANNSHCT---- 232
Cdd:cd07497    1 GEGVVIAIVDTGVDYSHPDLDIygNFSWKLKFDYKAYllpGMDKWGGFYVimYDFFSHGTSCA-SVAAGRGKMEYNlygy 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 233 ------VGIAFNAKIGGVRMLD-GDVT---------DMVEAKSV-SYNPQH-VHIYSASWGPDDDGKTVDGPAPLTRQAF 294
Cdd:cd07497   80 tgkfliRGIAPDAKIAAVKALWfGDVIyawlwtagfDPVDRKLSwIYTGGPrVDVISNSWGISNFAYTGYAPGLDISSLV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 295 ENGVRMGRrglGSVFVWASGNGGRSKDHCSCDGytNSIYTISISSTAESGKKPWYLeecssTLATTYSSGEsydkkIITT 374
Cdd:cd07497  160 IDALVTYT---GVPIVSAAGNGGPGYGTITAPG--AASLAISVGAATNFDYRPFYL-----FGYLPGGSGD-----VVSW 224
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 253314509 375 DLR----------------------QRCTDNHT------------GTSASAPMAAGIIALALEA 404
Cdd:cd07497  225 SSRgpsiagdpkpdlaaigafawapGRVLDSGGaldgneafdlfgGTSMATPMTAGSAALVISA 288
FU cd00064
Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is ...
741-780 1.35e-03

Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.


Pssm-ID: 238021 [Multi-domain]  Cd Length: 49  Bit Score: 37.50  E-value: 1.35e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 253314509 741 KCSENCKACIG--FHNCTECKGGLSLQGSRCSVTCEDGQFFN 780
Cdd:cd00064    1 PCHPSCATCTGpgPDQCTSCRHGFYLDGGTCVSECPEGTYAD 42
TNFRSF4 cd13406
Tumor necrosis factor receptor superfamily member 4 (TNFRSF4), also known as CD134 or OXO40; ...
675-786 4.67e-03

Tumor necrosis factor receptor superfamily member 4 (TNFRSF4), also known as CD134 or OXO40; TNFRSF4 (also known as OX40, ACT35, CD134, IMD16, TXGP1L) activates NF-kappaB through its interaction with adaptor proteins TRAF2 and TRAF5. It also promotes the expression of apoptosis inhibitors BCL2 and BCL2lL1/BCL2-XL, and thus suppresses apoptosis. It is primarily expressed on activated CD4+ and CD8+ T cells, where it is transiently expressed and upregulated on the most recently antigen-activated T cells within inflammatory lesions. This makes it an attractive target to modulate immune responses, i.e. TNFRSF4 (OX40) blocking agents to inhibit adverse inflammation or agonists to enhance immune responses. An artificially created biologic fusion protein, OX40-immunoglobulin (OX40-Ig), prevents OX40 from reaching the T-cell receptors, thus reducing the T-cell response. Some single nucleotide polymorphisms (SNPs) of its natural ligand OX40 ligand (OX40L, CD252), which is also found on activated T cells, have been associated with systemic lupus erythematosus.


Pssm-ID: 276911 [Multi-domain]  Cd Length: 142  Bit Score: 38.53  E-value: 4.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 675 SCPPGHYHADKKRCRKCAPNCE---SCFGSHGNQCLSCKYGYFlNEETS-----SCvTQCPDGSYEDIKKNvCGKCSENC 746
Cdd:cd13406    2 HCVGDTYPSGEKCCHECPPGEGmesRCTGTQDTVCSPCEPGFY-NEAVNyepckPC-TQCNQRSGSEEKQK-CTKTSDTV 78
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 253314509 747 KACIGfhnCTECKGGLSLqGSRCsVTCEDGQFFNGHD--CQP 786
Cdd:cd13406   79 CRCRP---GTQPLDSYKP-GVDC-VPCPPGHFSRGDNqaCKP 115
Peptidases_S8_Subtilisin_like_2 cd04847
Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the ...
168-399 5.88e-03

Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173793 [Multi-domain]  Cd Length: 291  Bit Score: 39.59  E-value: 5.88e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 168 VVTILDDGIERTHPDLMQN-YDALASCDVNGNDLDpmprydasnENKHGTRCAGEV---AATANNSH---CTVGIaFNAK 240
Cdd:cd04847    2 IVCVLDSGINRGHPLLAPAlAEDDLDSDEPGWTAD---------DLGHGTAVAGLAlygDLTLPGNGlprPGCRL-ESVR 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 241 IGGVRM-----LDGDVTDMVEAKSVSYNPQHVHIYSASWGPDDDGKTvDGPAPLTRQ----AFENGVrmgrrglgsVFVW 311
Cdd:cd04847   72 VLPPNGendpeLYGDITLRAIRRAVIQNPDIVRVFNLSLGSPLPIDD-GRPSSWAAAldqlAAEYDV---------LFVV 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 253314509 312 ASGNGGRSKDhcscDGYTNSIYTISISSTAES-----------GKKPWYLEECSSTL-----ATTYSSGES--------- 366
Cdd:cd04847  142 SAGNLGDDDA----ADGPPRIQDDEIEDPADSvnaltvgaitsDDDITDRARYSAVGpapagATTSSGPGSpgpikpdvv 217
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 253314509 367 -------YDKKIITTDL-------RQRCTDNHT----GTSASAPMAAGIIA 399
Cdd:cd04847  218 afggnlaYDPSGNAADGdlsllttLSSPSGGGFvtvgGTSFAAPLAARLAA 268
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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