NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|213021148|ref|NP_001132928|]
View 

putative transporter SVOPL isoform 1 [Homo sapiens]

Protein Classification

transporter SVOPL( domain architecture ID 13024570)

transporter SVOPL is a paralog to the synaptic vesicle protein SVOP

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
49-480 0e+00

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 645.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  49 ALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFS 128
Cdd:cd17442    1 LLFLIMGSTGVAEAMEIMLLAVVSPEIRCEWHLEDWQVALVTTMVFFGYMVFSILLGLLADRYGRWKILLLSFVWGAYFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 129 LLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVA 208
Cdd:cd17442   81 LLTSFAPSYIWFVFLRCMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQIFWLAGSLLIIGLASVVIPTLGWRWLIRFA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 209 SIPGIILIVAFKFIPesarfnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIW 288
Cdd:cd17442  161 SIPGIILIVVFKFIP-------------------------------------------------------RTTLQIWVIW 185
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 289 LGISFAYYGVILASAELLERDLVCGSKSDSAVvvTGGDSGESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFL 368
Cdd:cd17442  186 LGISFAYYGVILASSELLERNLLCGSDPSDEE--AGIKHIESESPCYCHMFNPSDYQTMIISTLGEIALNPLNILGINFL 263
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 369 GRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPF 448
Cdd:cd17442  264 GRRLSLVITMGLTAIFFLLLNICTSSAGLTIFLFMLRALVSANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPF 343
                        410       420       430
                 ....*....|....*....|....*....|..
gi 213021148 449 ISQVLMSASILGALCLFSSVCVVCAISAFTLP 480
Cdd:cd17442  344 ISQVLMSASVLGALCLFSSVCIVCAISAFTLP 375
 
Name Accession Description Interval E-value
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
49-480 0e+00

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 645.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  49 ALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFS 128
Cdd:cd17442    1 LLFLIMGSTGVAEAMEIMLLAVVSPEIRCEWHLEDWQVALVTTMVFFGYMVFSILLGLLADRYGRWKILLLSFVWGAYFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 129 LLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVA 208
Cdd:cd17442   81 LLTSFAPSYIWFVFLRCMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQIFWLAGSLLIIGLASVVIPTLGWRWLIRFA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 209 SIPGIILIVAFKFIPesarfnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIW 288
Cdd:cd17442  161 SIPGIILIVVFKFIP-------------------------------------------------------RTTLQIWVIW 185
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 289 LGISFAYYGVILASAELLERDLVCGSKSDSAVvvTGGDSGESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFL 368
Cdd:cd17442  186 LGISFAYYGVILASSELLERNLLCGSDPSDEE--AGIKHIESESPCYCHMFNPSDYQTMIISTLGEIALNPLNILGINFL 263
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 369 GRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPF 448
Cdd:cd17442  264 GRRLSLVITMGLTAIFFLLLNICTSSAGLTIFLFMLRALVSANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPF 343
                        410       420       430
                 ....*....|....*....|....*....|..
gi 213021148 449 ISQVLMSASILGALCLFSSVCVVCAISAFTLP 480
Cdd:cd17442  344 ISQVLMSASVLGALCLFSSVCIVCAISAFTLP 375
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
30-488 1.06e-81

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 262.26  E-value: 1.06e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   30 KTFTVEDAVETIGFGRFHIALFlIMGSTGVVEAMEIML--IAVVSPVIRCEWQL---ENWQVALVTTMVFFGYMVFSILF 104
Cdd:TIGR00898  69 LRFMVDQWANPSLLGCEPLKLS-DLGLAATEPCLDGWEysYDTFSSTIVTEWDLvceDAWKVDLTQSCFFVGVLLGSFVF 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  105 GLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHS-QGLIIKTEFLPTKYRGYMLPLSQVFWLA 183
Cdd:TIGR00898 148 GYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWvQAVVLNTEFLPKKQRAIVGTLIQVFFSL 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  184 GSLLIIGLAsVIIPtiGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNRSVMPEGKLVEPVL 263
Cdd:TIGR00898 228 GLVLLPLVA-YFIP--DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLE 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  264 E------KRGRFADLLDAKYLR-TTLQIWVIWLGISFAYYGVILASAELlerdlvcgsksdsavvvtGGdsgesqspcyc 336
Cdd:TIGR00898 305 KdlssskKQYSFLDLFRTPNLRkTTLCLMMLWFTTAFSYYGLVLDLGNL------------------GG----------- 355
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  337 hmfapSDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAG--LIGFLFMLRALVAANFNT 414
Cdd:TIGR00898 356 -----NIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYflRTALAVLGKFGITSAFQM 430
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 213021148  415 VYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQvLMSASILGALCLFSSVCVVCAISAFTLPiETKGRAL 488
Cdd:TIGR00898 431 VYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILTLFLP-ETKGVPL 502
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
44-484 3.99e-25

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 106.49  E-value: 3.99e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  44 GRFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLW 123
Cdd:COG2271    5 SRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 124 GAYFSLLTSFAPSYIWFVFLRTMVGCGVSG-HSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWR 202
Cdd:COG2271   85 WGLATLLFGFATSFWQLLLLRFLLGLGEAGfFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFGWR 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 203 WLIRVASIPGIILIVAfkfipesarfnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylrTTL 282
Cdd:COG2271  165 AAFLILGLPGLLLALL-------------------------------------------------------------RFW 183
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 283 QIWVIWLGISFAYYGVILASAELLERDLVCgSKSDSAVVVTGgdsgesqspcychmfapsdyrTMIISTIGEIALNPLni 362
Cdd:COG2271  184 LLALAYFLVYFALYGFLTWLPTYLVEVRGL-SLAQAGLLLSL---------------------PFLAGIVGSLLGGWL-- 239
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 363 lgINFLGRR--LSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCR 440
Cdd:COG2271  240 --SDRLGRRrkLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGF 317
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 213021148 441 IGAMVAPFISQVLMSA-SILGALCLFSSVCVVCAISAFTLPIETK 484
Cdd:COG2271  318 LGGALGPLLVGYLLDAtGYQAAFLLLAALALLAALLALLLLRETR 362
Sugar_tr pfam00083
Sugar (and other) transporter;
85-491 4.10e-18

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 86.56  E-value: 4.10e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLIS---FLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIK 161
Cdd:pfam00083  47 LSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIAnvlFVIGAVLQGAAKGKWSVYQLIVGRVLVGIGVGGASVLAPMY 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  162 T-EFLPTKYRGYMLPLSQVFWLAGSLL--IIGLASVII-PTIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGN--- 234
Cdd:pfam00083 127 IsEIAPKKLRGALGSLYQLAITFGILLayIFGLGLNKTsNSDGWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRlee 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  235 TRAALATLERVAKMNRSVMPEG-KLVEPVLEKRGRFADLLDAKYLRTTLQIWVIWLGI-------SFAYYG-VILASAEL 305
Cdd:pfam00083 207 AREVLAKLRGVPDVDRELDEIKdSLEAGQEAEKASWKELFSTKTRRQRLLIGVMLQIFqqltginAIFYYStTIFENLGL 286
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  306 lerdlvcgSKSDSAVVVTGGdsgesqspcychmfapsdyrTMIISTIGEIALnplnilgINFLGRRLSLSITMGCTALFF 385
Cdd:pfam00083 287 --------SDSFLVTIIVGV--------------------VNFVFTFIAIFL-------VDRFGRRPLLLLGAAGMAICF 331
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  386 LLLNICT---------SSAGLIGFLFMLRALVAANFNTV-YIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMS 455
Cdd:pfam00083 332 VILGIVAllgvsksdwAGIVAIVFIALFIAFFAMGWGPVpWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIITD 411
                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 213021148  456 A-SILGALCLFSSVCVVCAISAFTLPIETKGRALQQI 491
Cdd:pfam00083 412 AiGLGYTFFIFAGLLVLFIIFVFFFVPETKGRTLEEI 448
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
70-479 7.99e-12

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 66.91  E-value: 7.99e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  70 VVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGC 149
Cdd:PRK11551  36 VAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGV 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 150 GVSGHSQGLI-IKTEFLPTKYRGymlplsqvfwLAGSLLIIG------LASVI-----IPTiGWRWLIRVASI-PGIILI 216
Cdd:PRK11551 116 GLGGALPNLIaLTSEAVGPRLRG----------TAVSLMYCGvpfggaLASVIgvlaaGDA-AWRHIFYVGGVgPLLLVP 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 217 VAFKFIPESARFNVSTGNTRAALATLErvakmnrsvmpegklvepVLEKRGRfadlldakyLRTTLQIWVIWLGISFAYY 296
Cdd:PRK11551 185 LLMRWLPESRAFAQAAGAGKQRAPVLR------------------ALFGEGR---------ATATLLLWISYFFTLIVLY 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 297 GVI--LASAeLLERDLvcgSKSDSAVVVTGGDSGesqspcychmfapsdyrtmiiSTIGEIALNPLnilgINFLGRRLSL 374
Cdd:PRK11551 238 FLLnwLPSL-LVGQGL---SRSQAGLVQIAFNIG---------------------GALGSLLIGAL----MDRLRPRRVV 288
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 375 SITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLM 454
Cdd:PRK11551 289 LLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLL 368
                        410       420
                 ....*....|....*....|....*..
gi 213021148 455 SASILGALCLFSS--VCVVCAISAFTL 479
Cdd:PRK11551 369 ALGRSTVGVIGASipVILVAALAALLL 395
 
Name Accession Description Interval E-value
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
49-480 0e+00

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 645.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  49 ALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFS 128
Cdd:cd17442    1 LLFLIMGSTGVAEAMEIMLLAVVSPEIRCEWHLEDWQVALVTTMVFFGYMVFSILLGLLADRYGRWKILLLSFVWGAYFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 129 LLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVA 208
Cdd:cd17442   81 LLTSFAPSYIWFVFLRCMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQIFWLAGSLLIIGLASVVIPTLGWRWLIRFA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 209 SIPGIILIVAFKFIPesarfnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIW 288
Cdd:cd17442  161 SIPGIILIVVFKFIP-------------------------------------------------------RTTLQIWVIW 185
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 289 LGISFAYYGVILASAELLERDLVCGSKSDSAVvvTGGDSGESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFL 368
Cdd:cd17442  186 LGISFAYYGVILASSELLERNLLCGSDPSDEE--AGIKHIESESPCYCHMFNPSDYQTMIISTLGEIALNPLNILGINFL 263
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 369 GRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPF 448
Cdd:cd17442  264 GRRLSLVITMGLTAIFFLLLNICTSSAGLTIFLFMLRALVSANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPF 343
                        410       420       430
                 ....*....|....*....|....*....|..
gi 213021148 449 ISQVLMSASILGALCLFSSVCVVCAISAFTLP 480
Cdd:cd17442  344 ISQVLMSASVLGALCLFSSVCIVCAISAFTLP 375
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
51-479 0e+00

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 529.41  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  51 FLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLL 130
Cdd:cd17372    1 LAYAGMGWVAEAMEMMLLSFVGPAVQCEWNLSAWQVALITSVVFAGMMIGSYLWGIVSDKYGRRKGLIISALWTFYAGFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 131 TSFAPSYIWFVFLRTMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASI 210
Cdd:cd17372   81 SAFAPNYMWLIILRCLVGLGLGGGPQLASWYLEFLPAKSRGTWMVLFSVFWTVGTIFEASLAWLVMPRLGWRWLLAFSSV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 211 PGIILIVAFKFIPesarfnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIWLG 290
Cdd:cd17372  161 PSSLLLVFYRWTP-------------------------------------------------------KTTLLLWVIWFG 185
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 291 ISFAYYGVILASAELLERDLVCGSKSDSavvvtggDSGESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFLGR 370
Cdd:cd17372  186 NAFAYYGVVLLTTELNNSHNVCGSKSDS-------DSGESPTEKQCRNSNDVDYRDVFIATFAEFPGLLISAAMIDRLGR 258
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 371 RLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFIS 450
Cdd:cd17372  259 KASMASMLFTCCIFLLLLLICQSPFILTVLLFGGRACISAAFTVVYIYTPEVYPTAVRALGVGTGSSVGRIGAILCPFIA 338
                        410       420
                 ....*....|....*....|....*....
gi 213021148 451 QVLMSASILGALCLFSSVCVVCAISAFTL 479
Cdd:cd17372  339 QVLVHGSQTIALLLFSVVCLVSAICVCLL 367
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
30-488 1.06e-81

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 262.26  E-value: 1.06e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   30 KTFTVEDAVETIGFGRFHIALFlIMGSTGVVEAMEIML--IAVVSPVIRCEWQL---ENWQVALVTTMVFFGYMVFSILF 104
Cdd:TIGR00898  69 LRFMVDQWANPSLLGCEPLKLS-DLGLAATEPCLDGWEysYDTFSSTIVTEWDLvceDAWKVDLTQSCFFVGVLLGSFVF 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  105 GLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHS-QGLIIKTEFLPTKYRGYMLPLSQVFWLA 183
Cdd:TIGR00898 148 GYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWvQAVVLNTEFLPKKQRAIVGTLIQVFFSL 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  184 GSLLIIGLAsVIIPtiGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNRSVMPEGKLVEPVL 263
Cdd:TIGR00898 228 GLVLLPLVA-YFIP--DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLE 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  264 E------KRGRFADLLDAKYLR-TTLQIWVIWLGISFAYYGVILASAELlerdlvcgsksdsavvvtGGdsgesqspcyc 336
Cdd:TIGR00898 305 KdlssskKQYSFLDLFRTPNLRkTTLCLMMLWFTTAFSYYGLVLDLGNL------------------GG----------- 355
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  337 hmfapSDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAG--LIGFLFMLRALVAANFNT 414
Cdd:TIGR00898 356 -----NIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYflRTALAVLGKFGITSAFQM 430
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 213021148  415 VYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQvLMSASILGALCLFSSVCVVCAISAFTLPiETKGRAL 488
Cdd:TIGR00898 431 VYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILTLFLP-ETKGVPL 502
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
52-480 3.14e-81

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 256.66  E-value: 3.14e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  52 LIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLT 131
Cdd:cd17441    2 ILTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMLSSSLWGNISDQYGRKTGLKISVLWTLYYGILS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 132 SFAPSYIWFVFLRTMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIP 211
Cdd:cd17441   82 AFAPIYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKSRAKCILLIEVFWALGTVFEVLLAVFVMPTLGWRWLLILSALP 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 212 GIILIVAFKFIPESARFnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIWLGI 291
Cdd:cd17441  162 LLIFAVLCFWLPESARY--------------------------------------------------WTTILLWFIWFSN 191
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 292 SFAYYGVILASAELLERDLVCGSKSDSAVvvtggdsgESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFLGRR 371
Cdd:cd17441  192 AFSYYGLVLLTTELFQAGDVCSGSSGKKV--------EGKCSLECEYLTTSDYMDLLWTTLSEFPGLLVTLWIIDRFGRK 263
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 372 LSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQ 451
Cdd:cd17441  264 KTMALCFFVFSFCTLLLFSCVGRFSLTVLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQ 343
                        410       420
                 ....*....|....*....|....*....
gi 213021148 452 VLMSASILGALCLFSSVCVVCAISAFTLP 480
Cdd:cd17441  344 VMLESSVYLTLSVYSGCCLLAAIASCFLP 372
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
83-480 3.40e-38

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 141.95  E-value: 3.40e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  83 NWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSG-HSQGLIIK 161
Cdd:cd17317   24 DWLVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGiFTVGFVLG 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 162 TEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPtigWRWLIRVASIPGIILIVAFKFIPesarfnvstgntraalat 241
Cdd:cd17317  104 MEIVGPKYRSFVGILFGLFWALGYMLLALLAYLIRD---WRWLQLAISLPGLLFLLLLWWLP------------------ 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 242 lervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIWLGISFAYYGVILASAELlerdlvcgsksdsavv 321
Cdd:cd17317  163 -------------------------------------RRTIIVGLIWFVTSLVYYGLSLNSSNL---------------- 189
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 322 vtGGDsgesqspcychmfapsDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNI---CTSSAGLI 398
Cdd:cd17317  190 --GGN----------------LYLNFFLSGLVEIPAYFLALLLLDRLGRRWTLSGSLLLAGLACLVTALlpdDENTLALT 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 399 gFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISqVLMSASILGALCLFSSVCVVCAISAFT 478
Cdd:cd17317  252 -LALVGKFAISAAFSVIYLYTAELYPTVVRNTGVGLCSTVARVGAILAPFIV-LLGKIGPLLPLIIFGVLALLGGLLTLL 329

                 ..
gi 213021148 479 LP 480
Cdd:cd17317  330 LP 331
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
51-479 5.02e-37

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 139.66  E-value: 5.02e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  51 FLIMGSTGVVEAMEIMLIAVVSPVIRCE--WQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFS 128
Cdd:cd17316    1 LLLAGLGWFFDAYDFFLIGFVAPVLAAEfsLGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 129 LLTSFAPSYIWFVFLRTMVGCGVSGHSQG-LIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIP----TIGWRW 203
Cdd:cd17316   81 LLIGLLPTPILLLVLRFLQGIGIGGEYPGaSTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPllsgDWGWRI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 204 LIRVASIPGIILIVAFkfipesarfnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQ 283
Cdd:cd17316  161 LFLIGALPALLALLLR-----------------------------------------------------------RRTLL 181
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 284 IWVIWLGISFAYYGVILASAELLerdlvcgsksdsaVVVTGGDSGESqspcychmfapsdYRTMIISTIGEIALNPLNIL 363
Cdd:cd17316  182 LILLWFFISFGYYGLTTFLPTYL-------------QTVLGLSPATS-------------SLYLLLISLGALVGALIAGL 235
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 364 GINFLGRRLSLSITMGCTALF--FLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRI 441
Cdd:cd17316  236 LSDRIGRKKTLVIGLILSGILalPLFYLLSGSPTLLLLLLFILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLGRL 315
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 213021148 442 GAMVAPFISQVLMSASILGALCLFSSVCVVCAISAFTL 479
Cdd:cd17316  316 GGGGAPPLIALLLASTGGTGVPALILALLAIVALIVAL 353
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
51-484 1.11e-34

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 135.69  E-value: 1.11e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  51 FLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLL 130
Cdd:cd17363    1 FFVLGLALMADGVEVFVVGFVLPSAEKDMCLSNSNKGMLGLIVYLGMMVGAFVWGGLADKLGRKQCLLIALSVNGVFAFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 131 TSFAPSYIWFVFLRTMVGCGVSGhSQGLIIK--TEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIG-------- 200
Cdd:cd17363   81 SSFVQGYGFFLFCRLLSGIGIGG-SIPIVFSyfAEFLAREKRGEHLSWLCMFWMIGGLYASAMAWAIIPHYGwgfsmgta 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 201 -----WRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNRSVMPEGKLVEPVLE-KRgrfadlld 274
Cdd:cd17363  160 yqfhsWRVFVIVCALPSVASVVALTFMPESPRFLLEVGKHDEAWMILKQVHDTNMRAKGHPERVFTVSHiKR-------- 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 275 akylRTTLQIWVIWLGISFAYYGV------------------------------------ILASAELLERDLVCGSKSDS 318
Cdd:cd17363  232 ----MNTLFLAIVWFTMSFSYYGLtvwfpdmikylqfedslfeecyfedvtstntffencTFINTVFYNTDLFEYKFIDS 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 319 AVVvtgGDSGESQSPCYCHMF--APSDYRTMIISTIGEIALNPLNILGINFLGR--RLSL---SITMGCTALFFLLLniC 391
Cdd:cd17363  308 RFL---NSTFFLKEKCGCHLNddEENAYLIYLVSFLGSLSVLPGNIVSALLMDKigRLKMiggSMLLSAVCCFFLFF--G 382
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 392 TSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSASILGALCLFSSVCVV 471
Cdd:cd17363  383 NSESAMIGLQCLFCGVSIAAWNALDVVTVELYPTDKRATAFGFLNGLCKLAAILGNSIFGSFVGITKVIPILLASAALVC 462
                        490
                 ....*....|...
gi 213021148 472 CAISAFTLPiETK 484
Cdd:cd17363  463 GGLLALKLP-ETR 474
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
34-454 7.92e-34

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 131.71  E-value: 7.92e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   34 VEDAVETIGFGRFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGR 113
Cdd:TIGR00895   2 VQNNIRKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGR 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  114 WKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLI-IKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLA 192
Cdd:TIGR00895  82 RRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNaLVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  193 SVIIPTIGWRWLIRVASI-PGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNR---SVMPEGKLVEPVleKRGR 268
Cdd:TIGR00895 162 GWLIPVFGWRSLFYVGGIaPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAeaqSALPEQKSTQGT--KRSV 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  269 FADLLDAKYLRTTLQIWVIWLGISFAYYGVIlASAELLERDLvCGSKSDSAVVVTGGDSGesqspcychmfapsdyrtMI 348
Cdd:TIGR00895 240 FKALFQGKTARITVLLWLLYFMLLVGVYFLT-NWLPKLMVEL-GFSLSLAATGGALFNFG------------------GV 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  349 ISTIGEIALnplnilgINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMR 428
Cdd:TIGR00895 300 IGSIIFGWL-------ADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIR 372
                         410       420
                  ....*....|....*....|....*.
gi 213021148  429 ALGMGTSGSLCRIGAMVAPFISQVLM 454
Cdd:TIGR00895 373 ATGVGWAIGIGRLGAIIGPILAGYLL 398
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
35-489 9.16e-34

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 135.49  E-value: 9.16e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   35 EDAVETIGFGRFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRW 114
Cdd:TIGR01299 153 ELIIQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK 232
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  115 KILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGhSQGLIIK--TEFLPTKYRGYMLPLSQVFWLAGSLLIIGLA 192
Cdd:TIGR01299 233 QCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGG-AIPIVFSyfAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA 311
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  193 SVIIPTIG-------------WRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMN---------- 249
Cdd:TIGR01299 312 WAIIPHYGwsfqmgsayqfhsWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNmrakghpekv 391
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  250 ------RSVMPEGKLVE-----PVLEKR-------------GRFADLLDAKYLRTTLQIWVIWLGISFAYYGVI------ 299
Cdd:TIGR01299 392 fsvnhiKTIHQEDELIEiesdtGTWYQRcfvralsegggiwGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSvwfpdm 471
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  300 ---LASAEL--------------------LERDLVCGSKSDSAVV-------VTGGDS---------------------- 327
Cdd:TIGR01299 472 ikhLQADDYaaltknfpgdkvahfsfnftLENQIHRGGEYDNDKFiglkfksVSFEDSlfeectfddvtssntffknctf 551
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  328 -----------------GESQSPCYCH-------MFAPSDYRTMII---STIGEIALNPLNILGINFLGR--RLSL---S 375
Cdd:TIGR01299 552 idtlfentdfeeykfidSEFQNCSFLHnkegcpiDFDGDDEGAYMIyfvNFLGTLAVLPGNIVSALLMDKigRLRMlagS 631
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  376 ITMGCTALFFLLLNicTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMS 455
Cdd:TIGR01299 632 MVLSCISCFFLSFG--NSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVG 709
                         570       580       590
                  ....*....|....*....|....*....|....
gi 213021148  456 ASILGALCLFSSVCVVCAISAFTLPiETKGRALQ 489
Cdd:TIGR01299 710 ITKAAPILFASAALACGGLLALKLP-DTRGQVLM 742
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
59-480 4.80e-30

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 120.87  E-value: 4.80e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  59 VVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYI 138
Cdd:cd17371    9 ALDGFDLLLLGLVLPALIAEFGLDEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYW 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 139 WFVFLRTMVGCGVSGH-SQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIP----TIGWRWLIRVASIPGI 213
Cdd:cd17371   89 QLLILRALAGLGFGGEwAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLFPllppEIAWRVLFLLGALPAL 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 214 ILIVAFKFIPESARFNVStgntRAALATLERVAKmnrsvmpegklvepvlekrgrFADLLDAKYLRTTLQIWVIWLGISF 293
Cdd:cd17371  169 LVLFIRRFVKEPPQWQAA----RAARRHFADRPS---------------------LRELFSPPLLRTTLLASLLATGALG 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 294 AYYGVILASAELL--ERDLVCGSKSDSAVVVtggdsgesqspcYCHMFapsdyrtmiistIGEIALNPLNILginfLGRR 371
Cdd:cd17371  224 GYYGITTWLPSYLtgERGLSFEGSAGYLVVT------------ILGGF------------LGYLAGGFLADR----IGRR 275
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 372 LSLSITMGCTALFFLLLNICTSSAGLIGFL-FMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFIS 450
Cdd:cd17371  276 NNFALFALGSAISILLYFFLPLSPTLILILgFPLGFFASGPFSGMGAYLTELFPTAVRATAQGFCYNVGRIIGALFPFLV 355
                        410       420       430
                 ....*....|....*....|....*....|..
gi 213021148 451 QVLMSASILG--ALCLFSSVCVVCAISAFTLP 480
Cdd:cd17371  356 GFLATSGSLGtaIAVFAAVYYIAGLVLALLLP 387
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
51-484 2.96e-28

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 117.33  E-value: 2.96e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  51 FLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLL 130
Cdd:cd17438    1 FFVLGLALMADGVEVFVVGFVLPSAEKDMCLSSSNKGMLGLIVYLGMMAGAFIWGGLADKLGRKRCLIISLAINASFAFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 131 TSFAPSYIWFVFLRTMVGCGVSGhSQGLIIK--TEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIG-------- 200
Cdd:cd17438   81 SSFVQGYGAFLFCRLISGFGIGG-SLPIVFAyfSEFLAREKRGEHLSWLCMFWMIGGLYASAMAWSIIPHYGwgfsmgtn 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 201 -----WRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNRSVMPEGKLVEPVLE-KRgrfadlld 274
Cdd:cd17438  160 yhfhsWRVFVIICALPCIASIIALKFMPESPRFLLEMGKHDEAWMILKNIHDTNMRAKGTPEKVFTVSNiKR-------- 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 275 akylRTTLQIWVIWLGISFAYYGVILASAELLERDLVCGSKSDSAVV------VTGGDS--------------------- 327
Cdd:cd17438  232 ----KNTLFLAVVWFTMAFSYYGLTVWFPDMIRYLQKHVTFEDSLFDecyfedVTSTDTyfknctiestifyntdlyehk 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 328 -----------GESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFLGR--RLSL---SITMGCTALFFLLLNic 391
Cdd:cd17438  308 fidcrfinstfLEQKEGCHMDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDKigRIKMiggSMLISAVCCFFLFFG-- 385
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 392 TSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSASILGALCLFSSVCVV 471
Cdd:cd17438  386 NSESAMIGWQCLFCGTSIAAWNALDVITVELYPTNKRATAFGILNGLCKFAAILGNSIFASFVGITKVIPILLASTALVG 465
                        490
                 ....*....|...
gi 213021148 472 CAISAFTLPiETK 484
Cdd:cd17438  466 GGLISLRLP-ETR 477
MFS_SV2A cd17439
Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; ...
51-480 6.83e-27

Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. It is unclear how SV2A is involved in correct SV function, but it has been suggested to either act as a transporter or a regulator of exocytosis by mediating Ca2+ dynamics. SV2A has been identified as the molecular target of the antiepileptic drug levetiracetam (LEV). Its expression is decreased in patients with epilepsy and in epileptic animal models. SV2A belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340997 [Multi-domain]  Cd Length: 478  Bit Score: 113.20  E-value: 6.83e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  51 FLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLL 130
Cdd:cd17439    1 YFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRIGRRQCLLISLSVNSVFAFF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 131 TSFAPSYIWFVFLRTMVGCGVSGhSQGLIIK--TEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIG-------- 200
Cdd:cd17439   81 SSFVQGYGTFLFCRLLSGVGIGG-SIPIVFSyfSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGwsfqmgsa 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 201 -----WRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNRSVMPEGKLVEPVLE-KRgrfadlld 274
Cdd:cd17439  160 yqfhsWRVFVLVCAFPSVFAIGALTTMPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHiKR-------- 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 275 akylRTTLQIWVIWLGISFAYYGVILASAELLERDLVCGSKSDSAVV------VTGGDSGESQSPCYCHMFAPSD----- 343
Cdd:cd17439  232 ----RITLMMMAVWFTMSFSYYGLTVWFPDMIKHLQKSVVFEDSLFEecyfedITSSNTFFKNCTFISTLFYNTDlfeyk 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 344 ----------------------------YRTMIISTIGEIALNPLNILGINFLG-----RRLSLSITMGCTALFFLLLNi 390
Cdd:cd17439  308 finsklinstflhnkegclldfsdennaYMIYFVSFLGTLAVLPGNIVSALLMDkigrlRMLAGSSVMSCVSCFFLSFG- 386
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 391 cTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSASILGALCLFSSVCV 470
Cdd:cd17439  387 -NSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGITKAVPILLASAALA 465
                        490
                 ....*....|
gi 213021148 471 VCAISAFTLP 480
Cdd:cd17439  466 AGSSLALKLP 475
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
88-480 2.77e-26

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 109.30  E-value: 2.77e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  88 LVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHS-QGLIIKTEFLP 166
Cdd:cd17374   39 VAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGTCAAFAPTFPVYCVLRFLAGFAVSGISiNTLILGTEWTT 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 167 TKYRGYMLPLSQVFWLAGSLLIIGLASVIiptIGWRWLIRVASIPGIILIVAFKFIPesarfnvstgntraalatlerva 246
Cdd:cd17374  119 PRHRALAITLTSCFFSIGQMLLAGLAYAI---RDWRLLQLVVSVPFFLFFLYSWWLP----------------------- 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 247 kmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIWLGISFAYYGVILaSAELLERDLvcgsksdsavvvtggd 326
Cdd:cd17374  173 --------------------------------KRTLILSFVWFANSFSYYGLSL-DLQHLGLNV---------------- 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 327 sgesqspcychmfapsdYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLN-ICTSSAGLIGFLFMLR 405
Cdd:cd17374  204 -----------------FLLQFLFGAVEVPARCLALFLLNHMGRRISQAVLLLLAGLCILANIfVPQEMQTLRTVLAVLG 266
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 213021148 406 -ALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFIsQVLMSASILGALCLFSSVCVVCAISAFTLP 480
Cdd:cd17374  267 kGSSAAAFTISYVYTAELFPTVLRQTGMGLNSMFARIGGILAPLI-MLLGVYSPLLPMIIYGVLPILAGLLALLLP 341
MFS_SV2C cd17440
Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; ...
51-480 5.60e-26

Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2C exhibits enriched expression in several basal ganglia nuclei, and has been found to be involved in normal operation of the basal ganglia network and could be also be involved in system adaptation in basal ganglia pathological conditions. SV2C belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340998 [Multi-domain]  Cd Length: 479  Bit Score: 110.39  E-value: 5.60e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  51 FLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLL 130
Cdd:cd17440    1 FFVLGMALMADGVEVFVVGFVLPSAETDMCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRRQSLLICMSVNGFFAFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 131 TSFAPSYIWFVFLRTMVGCGVSGHSQGLIIK-TEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIG--------- 200
Cdd:cd17440   81 SSFVQGYGLFLFCRLLSGFGIGGAVPTVFSYfAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGwsfsmgsay 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 201 ----WRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNrsvmpegklvepvLEKRGRFADLLDAK 276
Cdd:cd17440  161 qfhsWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAWMILKQIHDTN-------------MRARGQPEKVFTVN 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 277 YL--RTTLQIWVIWLGISFAYYGV-----------------------------------------ILASAELLERDLVCG 313
Cdd:cd17440  228 RIkkDNTIKLTIVWLTLSFGYYGLsvwfpdvikhlqfksvtfedslfkscffedvtsvntyfrncTFIETVFYNTDLEDY 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 314 SKSDSAVVvtggDSGESQSPCYCHMFAPSDYRT---MIISTIGEIALNPLNI---LGINFLGRRLSLSITMGCTALFFLL 387
Cdd:cd17440  308 KFIDSDFI----NCTFFHNKTGCQITFDDDYSAywiYFVNFLGTLAVLPGNIvsaLLMDRIGRLTMLGGSMVLSGISCFF 383
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 388 LNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSASILGALCLFSS 467
Cdd:cd17440  384 LWFGTSESMMIGMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVGITKAIPILLAST 463
                        490
                 ....*....|...
gi 213021148 468 VCVVCAISAFTLP 480
Cdd:cd17440  464 VLVCGGLVGLRLP 476
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
72-480 1.29e-25

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 107.51  E-value: 1.29e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  72 SPVIRCEWQLENWQVAL---VTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVG 148
Cdd:cd17447   20 SSTIATEWDLVCDRKGLnqaTATFFFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGLASAFSVSYVMFAITRTLTG 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 149 CGVSGHS-QGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIiptIGWRWLIRVASIPGIILIVAFKFIPesar 227
Cdd:cd17447  100 FALTGFSiISMVLCVEWVDIEHRTVAGVLISLFWTVGNMLLALVAYLI---RDWRWLILAVTLPCAPGIITWWWVP---- 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 228 fnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIWLGISFAYYGVILAsaelle 307
Cdd:cd17447  173 ---------------------------------------------------KISLCTGIVWFGVAFTYYGISFN------ 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 308 rdlvcgsksdsavvVTGgdsgesqspcychmFAPSDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLL 387
Cdd:cd17447  196 --------------ISG--------------FGLNVYLTQFIYGAIELPAKLLAYLLLDRIGRRLTQAGSLILTGLSIGI 247
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 388 LNICTSSAGLI--GFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISqVLMSASILGALCLF 465
Cdd:cd17447  248 NILIPSEFTVVrtVIAVLGKGFSEAAFTTVFLYTSELYPTVLRQNGMGYTSFIARLGGSLAPLVI-LLDDVWLSLPQVIF 326
                        410
                 ....*....|....*
gi 213021148 466 SSVCVVCAISAFTLP 480
Cdd:cd17447  327 CGVALLAGGVAFLLP 341
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
44-484 3.99e-25

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 106.49  E-value: 3.99e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  44 GRFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLW 123
Cdd:COG2271    5 SRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 124 GAYFSLLTSFAPSYIWFVFLRTMVGCGVSG-HSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWR 202
Cdd:COG2271   85 WGLATLLFGFATSFWQLLLLRFLLGLGEAGfFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFGWR 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 203 WLIRVASIPGIILIVAfkfipesarfnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylrTTL 282
Cdd:COG2271  165 AAFLILGLPGLLLALL-------------------------------------------------------------RFW 183
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 283 QIWVIWLGISFAYYGVILASAELLERDLVCgSKSDSAVVVTGgdsgesqspcychmfapsdyrTMIISTIGEIALNPLni 362
Cdd:COG2271  184 LLALAYFLVYFALYGFLTWLPTYLVEVRGL-SLAQAGLLLSL---------------------PFLAGIVGSLLGGWL-- 239
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 363 lgINFLGRR--LSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCR 440
Cdd:COG2271  240 --SDRLGRRrkLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGF 317
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 213021148 441 IGAMVAPFISQVLMSA-SILGALCLFSSVCVVCAISAFTLPIETK 484
Cdd:COG2271  318 LGGALGPLLVGYLLDAtGYQAAFLLLAALALLAALLALLLLRETR 362
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
59-480 1.77e-22

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 98.43  E-value: 1.77e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  59 VVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYI 138
Cdd:cd17365    9 VLDGFDLAVMGFVAPALAQDWGLSPAQLGPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 139 WFVFLRTMVGCGVSGHSQGLI-IKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIV 217
Cdd:cd17365   89 QLALLRFLTGLGLGAAMPNAItLVSEYAPARRRSLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFLLGGVPPLILLP 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 218 AfkfipesarfnvstgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakyLRTTLQIWVIWLGISFAYYG 297
Cdd:cd17365  169 L-----------------------------------------------------------LRGTLLLWVTFFMGLLLVYL 189
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 298 VILASAELLerdlvcgsksdsavVVTGGDSGEsqspcychmfapsdyrtmiiSTIGEIALNPLNILGINFLGR------- 370
Cdd:cd17365  190 LNSWLPKLM--------------VEAGYSLSQ--------------------ALTITLLLNIGGVIGSLLLGWladrfgp 235
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 371 RLSLSITMGCTALF-FLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFI 449
Cdd:cd17365  236 KRVLALFFALGAVSlALLGVSPASLVLLYVLVFLAGACVNGAQVGLYALAARFYPTEVRATGVGWALGVGRLGAILGPLL 315
                        410       420       430
                 ....*....|....*....|....*....|...
gi 213021148 450 SQVLMSA--SILGALCLFSSVCVVCAISAFTLP 480
Cdd:cd17365  316 GGLLLAAglGPESVFLALAIPAALGALAVLLLR 348
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
45-446 1.13e-21

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 96.20  E-value: 1.13e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  45 RFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWG 124
Cdd:COG2814    6 RRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLF 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 125 AYFSLLTSFAPSYIWFVFLRTMVGCGVSG-HSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRW 203
Cdd:COG2814   86 ALGSLLCALAPSLWLLLAARFLQGLGAGAlFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWRW 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 204 LIRVASIPGII-LIVAFKFIPESARFnvstgntraalatlervakmnrsvmpegklvepvlEKRGRFADLLDAKYLRTTL 282
Cdd:COG2814  166 VFLVNAVLALLaLLLLLRLLPESRPA-----------------------------------ARARLRGSLRELLRRPRLL 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 283 QIWVIWLGISFAYYGVILASAELLERdlVCGSKSDSAVVVtggdsgesqspcychmfapsdyrtMIISTIGEIALNPLNI 362
Cdd:COG2814  211 LLLLLAFLLGFGFFALFTYLPLYLQE--VLGLSASAAGLL------------------------LALFGLGGVLGALLAG 264
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 363 LGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIG 442
Cdd:COG2814  265 RLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLG 344

                 ....
gi 213021148 443 AMVA 446
Cdd:COG2814  345 GPLA 348
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
85-471 7.28e-21

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 93.64  E-value: 7.28e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVffGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHS-QGLIIKTE 163
Cdd:cd17446   36 QLAQSIYMA--GVLVGAIVFGGLSDRFGRRPLLIWSYLQMAVSGTCAAFSPSFPIYCVFRFLTGMALSGIVlNSVSLNVE 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 164 FLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPtigWRWLIRVASIPGIILIVAFKFIPesarfnvstgntraalatle 243
Cdd:cd17446  114 WMPTRVRAVVGTLLGYCYTLGQLILAGVAYAIRD---WRWLQLAVSLPFFIFFLYSWWFP-------------------- 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 244 rvakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIWLGISFAYYGvilasaelLERDLvcgsksdsavvvt 323
Cdd:cd17446  171 -----------------------------------RITFCLSLVWFSTSFAYYG--------LAMDL------------- 194
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 324 ggdsgesqspcycHMFAPSDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLL-------LNICTSSAG 396
Cdd:cd17446  195 -------------QKFGVSIYLIQIIFGAVDIPAKFISTLTMSYLGRRPTQAAALILAGIMILAnifvpqdLQTVRTALA 261
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 397 LIGflfmlRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFIS-----QVLMSASILGALCLFSSVCVV 471
Cdd:cd17446  262 VFG-----KGCLAASFNCVYLYTGELYPTVIRQTGMGLGSTMARLGGIVAPLVKmlgeyYPFLPLIIYGAAPILSGIAAC 336
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
84-480 1.75e-20

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 92.41  E-value: 1.75e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  84 WQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGH-SQGLIIKT 162
Cdd:cd17379   33 WKLDLFQSSLNLGFLIGSIVIGYLADRFGRKVCFLISILGNGVSGVLMAFSPNYPWFLIFRFLQGLFGKGGwMTGYVLVT 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 163 EFLPTKYRGYMLPLSQVFWLAGSLLIIGLASViIPTigWRWLIRVASIPGIILIVAFKFIPesarfnvstgntraalatl 242
Cdd:cd17379  113 EFVGSKYRRTVGIVYQMFFTLGLLILPGIAYF-IPH--WRWLQLAVTLPNFLFLLYYWFIP------------------- 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 243 ervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIWLGISFAYYGVILASAellerdlvcgsksdsavvV 322
Cdd:cd17379  171 ------------------------------------KHTFILMYAWFTSAVVYQGLIMRLG------------------I 196
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 323 TGGDSgesqspcychmfapsdYRTMIISTIGEIALNPLNILGINFLGRRLSLSIT-----MGCTALFFL-----LLNICT 392
Cdd:cd17379  197 TGGNL----------------YLDFFISALVELPAAFIILLTIDRIGRRLPFAASnivagAACLITAFIppdlhWLKTTI 260
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 393 SSAGLIGflfmlralVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSASILGALCLFSSVCVVC 472
Cdd:cd17379  261 ACVGRLG--------ITMAFEIVCLVNTELYPTFLRNLGVSVCSSLCDIGGIIAPFLLYRLAEIWLELPLIVFGVLALVA 332

                 ....*...
gi 213021148 473 AISAFTLP 480
Cdd:cd17379  333 GGLVLLLP 340
MFS_SLC22A4_5_OCTN1_2 cd17376
Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 ...
75-449 1.77e-20

Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 and 2) of the Major Facilitator Superfamily of transporters; This subfamily is composed of solute carrier family 22 members 4 (SLC22A4) and 5 (SLC22A5), and similar proteins. SLC22A4 is also called ergothioneine transporter (ETT) or organic cation/carnitine transporter 1 (OCTN1). It is a sodium-ion dependent, low affinity carnitine transporter, and a highly specific transporter for the uptake of ergothioneine (ET), a thiolated derivative of histidine with antioxidant properties. ET is a natural compound produced only by certain fungi and bacteria and must be absorbed from the diet by humans and other vetebrates. SLC22A5, also called organic cation/carnitine transporter 2 (OCTN2), is a sodium-ion dependent, high affinity carnitine transporter involved in the active cellular uptake of carnitine. SLC22A4/5 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340934 [Multi-domain]  Cd Length: 342  Bit Score: 92.53  E-value: 1.77e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  75 IRCEWQL---ENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCG- 150
Cdd:cd17376   23 IVTEWNLvceDDWKVPLTTSLFFVGVLLGSFISGQLSDRFGRKKVLFATMAVQTGFSFLQIFSPSWEMFTVLFVIVGMGq 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 151 VSGHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTigWRWLIRVASIPGIILIVAFKFIPesarfnv 230
Cdd:cd17376  103 ISNYVVAFVLGTEILGKSVRILFSTLGVCIFYAIGYMLLPLFAYFIRD--WRMLLLALTLPGVLCVPLWWFIP------- 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 231 stgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIWLGISFAYYGVILASAELlerdl 310
Cdd:cd17376  174 ------------------------------------------------ITTIMSLLLWMAISVGYFGLSLNTPNL----- 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 311 vcgsksdsavvvtggdSGESQSPCYchmfapsdyrtmiISTIGEIALNPLNILGINFLGRRLSLSITM--GCTALFFLLL 388
Cdd:cd17376  201 ----------------HGDPYLNCF-------------LSAVIEVPAYIIAWLLLRSLPRRYSIAATLvlGGGVLLFIQL 251
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 213021148 389 nICTSSAGLIGFLFMLRAL-VAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFI 449
Cdd:cd17376  252 -VPTDLQVLATALVMLGKFgITAAFSMVYVYTAELYPTVVRNMGVGVCSTASRIGSIISPYF 312
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
75-449 6.17e-20

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 90.99  E-value: 6.17e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  75 IRCEWQL---ENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGV 151
Cdd:cd17377   27 IVSEWFLvgnAAYKVSLASSFFFAGVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALAPSYEFFAVSRFLVGVMN 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 152 SGHSQ-GLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPtigWRWLIRVASIPGIILIVAFKFIPEsarfnv 230
Cdd:cd17377  107 GGMSLvAFVLLNECVGKSYWALAGSLGGLFFAVGIAQYALLGYFIRS---WRTLAVVVNLQGTLVFLLSLFIPG------ 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 231 stgntraalatlervakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWvIWLGISFAYYGVILASAELlerdl 310
Cdd:cd17377  178 ------------------------------------------------RTLILMY-VWFVCSLVYYGLTLNAGDL----- 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 311 vcgsksdsavvvtGGDSgesqspcychmfapsdYRTMIISTIGEIALNPLNILGIN--FLGRRLSLS--ITMGCTALFFL 386
Cdd:cd17377  204 -------------GGNI----------------YLNLALSGLVELPAYPLCIYLINqkWSGRRRTLAgfLFLGGIACLLV 254
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 213021148 387 LLNICTSSAGLIGFL------FMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFI 449
Cdd:cd17377  255 MFVPEKKDSGVFAVVnstslsLLGKLTISAAFNIVYIYTSELYPTVVRNAGLGVCSMFSRVGGIIAPFI 323
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
44-246 2.65e-19

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 88.33  E-value: 2.65e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  44 GRFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLW 123
Cdd:COG0477    9 TRRRRRALLALALGTFLEGLDFTIVNVALPSIAADLGASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 124 GAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHS-QGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWR 202
Cdd:COG0477   89 FGLASLLCGLAPSPELLIAARALQGIGAGGLMpGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAALGWR 168
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 213021148 203 WLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVA 246
Cdd:COG0477  169 WIFLINAPLGLLALVLRLRLPESRGLLLALLALALAALLLAALA 212
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
83-491 2.18e-18

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 87.78  E-value: 2.18e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   83 NWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLIS---FLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLI 159
Cdd:TIGR00879  70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIallFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP 149
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  160 IKT-EFLPTKYRGYMLPLSQVFWLAGSLL--IIGLASVIIP-TIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNT 235
Cdd:TIGR00879 150 MYLsEIAPKALRGALTSLYQLAITFGILVayGFGSGKVSLNnTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRV 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  236 RAA---LATLERVAKMNRSVMPEGKLVEP--VLEKRGRFADLLDAKYLRTTLqIWVIWLGI------------SFAYYG- 297
Cdd:TIGR00879 230 EEArksLARLRGTSGEDKELLDELELIDIkrSIEKRSVQPSWGSLFSSTRRI-RRRLFLGVvlqwfqqftginAIMYYSp 308
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  298 VILASAellerdlvcGSKSDSAVVVTGGdsgesqspCYCHMFAPSDYRTMIISTIGEialNPLNILGinFLGRRLSLSIT 377
Cdd:TIGR00879 309 TIFENA---------GVSTDHAFLVSII--------VGAVNFAFTFVAIFLVDRFGR---RPLLLIG--AAGMAICLFVL 366
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  378 MGCTalFFLLLNICTSSAGLIGFLFMlraLVAANFNT-----VYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQV 452
Cdd:TIGR00879 367 GILG--ASFVTGSSKSSGNVAIVFIL---LFIAFFAMgwgpvPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPT 441
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 213021148  453 LMSASILG-ALCLFSSVCVVCAISAFTLPIETKGRALQQI 491
Cdd:TIGR00879 442 MLESIGVGgVFIFFGGLNVLGLIFVYFFLPETKGRTLEEI 481
Sugar_tr pfam00083
Sugar (and other) transporter;
85-491 4.10e-18

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 86.56  E-value: 4.10e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLIS---FLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIK 161
Cdd:pfam00083  47 LSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIAnvlFVIGAVLQGAAKGKWSVYQLIVGRVLVGIGVGGASVLAPMY 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  162 T-EFLPTKYRGYMLPLSQVFWLAGSLL--IIGLASVII-PTIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGN--- 234
Cdd:pfam00083 127 IsEIAPKKLRGALGSLYQLAITFGILLayIFGLGLNKTsNSDGWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRlee 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  235 TRAALATLERVAKMNRSVMPEG-KLVEPVLEKRGRFADLLDAKYLRTTLQIWVIWLGI-------SFAYYG-VILASAEL 305
Cdd:pfam00083 207 AREVLAKLRGVPDVDRELDEIKdSLEAGQEAEKASWKELFSTKTRRQRLLIGVMLQIFqqltginAIFYYStTIFENLGL 286
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  306 lerdlvcgSKSDSAVVVTGGdsgesqspcychmfapsdyrTMIISTIGEIALnplnilgINFLGRRLSLSITMGCTALFF 385
Cdd:pfam00083 287 --------SDSFLVTIIVGV--------------------VNFVFTFIAIFL-------VDRFGRRPLLLLGAAGMAICF 331
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  386 LLLNICT---------SSAGLIGFLFMLRALVAANFNTV-YIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMS 455
Cdd:pfam00083 332 VILGIVAllgvsksdwAGIVAIVFIALFIAFFAMGWGPVpWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFPIITD 411
                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 213021148  456 A-SILGALCLFSSVCVVCAISAFTLPIETKGRALQQI 491
Cdd:pfam00083 412 AiGLGYTFFIFAGLLVLFIIFVFFFVPETKGRTLEEI 448
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
81-486 7.52e-17

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 82.69  E-value: 7.52e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  81 LENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLIS---FLWGAYFSLLTSFAPSYIWFVFLRTMVG--CGVSGHS 155
Cdd:cd17357   46 ELDLLWSLIVSIFFIGGAIGSFISAFLANRFGRKNGLLISnalLVVSSLLMFLSKSAKSPELLIFGRFLVGiaCGLSTGF 125
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 156 QGLIIkTEFLPTKYRGYMLPLSQVFWLAGSLL--IIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPESARFNVST- 232
Cdd:cd17357  126 VPMYL-QEISPSELRGALGSLTQIGVTLGILLgqVFGLPSVLGTETLWPYLLFFPGIPALLQLAALPFFPESPKFLLISk 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 233 GNTRAALATLER---VAKMNRSVMPEGKL--VEPVLEKRGRFADLL-DAKYLRTTLQIWVIWLGISFAYYGVILASAELL 306
Cdd:cd17357  205 GDEEEAEKSLKFlrgIEDDVDQELEEIKKesEQMGDQKQVSLMQLLrDPSLRLPLLLVLVVSASQQFSGINAIFFYSTFI 284
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 307 ERDLvcGSKSDSAVVVTGGdsgesqspcychmfapsdyrTMIISTIGEIalnpLNILGINFLGRRLSLSITMGCTALFFL 386
Cdd:cd17357  285 FENA--GFSPQLAEWANLG--------------------IGIVNVLSTI----VGPFLIEKVGRRPLLLISLSVCAVALL 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 387 LLNICTS--------SAGLIGFLFMLRALVAANFNTV-YIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSAS 457
Cdd:cd17357  339 LMSVFLFlseqnswmSYGCIVAIFLFIFFFAIGLGPIpWFIGAELFPQAPRSAAQSLGSSVNWTSNFIVGMAFPPLQSIG 418
                        410       420
                 ....*....|....*....|....*....
gi 213021148 458 ILGALCLFSSVCVVCAISAFTLPIETKGR 486
Cdd:cd17357  419 GGFVFIIFAIPCALFLLYLYRYLPETKGR 447
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
67-227 5.98e-16

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 79.59  E-value: 5.98e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  67 LIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLIS-FLWGAyFSLLTSFAPSYIWFVFLRT 145
Cdd:cd17328   17 TIAGVLPDIQSDFLIDDSLAGLLQTVFIISYMVLSPIFGYLGDRYNRKWILAVGiLIWSA-ATLLSSFAPNFWQLLLFRA 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 146 MVGCGVSGHS---QGLIikTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVII-PTIGWRWLIRVASIPGIILIVAFKF 221
Cdd:cd17328   96 LVGIGEASYSpiaPTII--ADLFPKEKRTRALGVFYFAIPLGSGLGYVVGGLVAqATGGWRWAFRVTGVLGVLLAILLLL 173

                 ....*.
gi 213021148 222 IPESAR 227
Cdd:cd17328  174 FVREPP 179
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
58-477 1.53e-15

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 78.24  E-value: 1.53e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  58 GVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSY 137
Cdd:cd06174    5 FFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 138 IWFVFLRTMVGCGVSGH-SQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVII--PTIGWRWLIRVASIPGII 214
Cdd:cd06174   85 WLLLLGRFLLGLGSGLIdPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILAssLGFGWRAVFLIAAALALL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 215 LIVAFKFIPESARFNVSTGNTRAALATLervakmnrsvmpegklvepvlekrgrFADLLDAKYLRTTLQIWVIWLGISFA 294
Cdd:cd06174  165 AAILLLLVVPDPPESARAKNEEASSKSV--------------------------LKLLKRVLKNPGLWLLLLAIFLVNLA 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 295 YYGVILASAELLERDLVCGSKSDSAVvvtggdsgesqspcychmfapsdyrtMIISTIGEIALNPL-NILGINFLGRRLS 373
Cdd:cd06174  219 YYSFSTLLPLFLLDLGGLSVAVAGLL--------------------------LSLFGLAGALGSLLlGLLSDRLIGRKPL 272
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 374 LSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVL 453
Cdd:cd06174  273 LLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFL 352
                        410       420
                 ....*....|....*....|....*
gi 213021148 454 MSASI-LGALCLFSSVCVVCAISAF 477
Cdd:cd06174  353 LAATFgLTGAFLVLAVLLLLAAILL 377
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
85-490 4.92e-15

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 76.85  E-value: 4.92e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGL-IIKTE 163
Cdd:cd17358   42 QFSWFGSLLTLGALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASVVVpVYIAE 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 164 FLPTKYRGYMLPLSQVFWLAGSLLIIGLASViiptIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLE 243
Cdd:cd17358  122 IAPKNVRGALGSLNQLLVNIGILLGYVLGSF----LPWRTLALIGAIPPVVFLILLFFIPESPRWLAKKGREEEAEKSLQ 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 244 RVAKMNRSVMPEGKLVEPVLE------KRGRFADLLDAKYLRTTlqiwVIWLGISFAY-----YGVILASAELLERDLVC 312
Cdd:cd17358  198 FLRGKDADISKEAAEIQEELAelekeaKESSFSDLFQRKYLKPL----VIGLGLMLFQqlsgiNAVIFYASSIFDEAGSG 273
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 313 GSKSDSAVVVtggdsGESQSPCYCHMFAPSDY----RTMIISTIGeIALNPLNILGINFLGRRLSLSITMGCTALFFLLL 388
Cdd:cd17358  274 LDPNTATIII-----GVVQVVGTLVATLLVDRlgrrPLLLVSAIG-MGIGLLALGLYFYLQEHGALLSSVSWLPLVGLVI 347
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 389 NICTSSAGLIGFLFMLralvaanfntvyiyTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSA-SILGALCLFSS 467
Cdd:cd17358  348 YIISFSIGLGPLPWVI--------------MSEIFPAKIKGLAGSLVTLVNWLFAFIVTKTFPFLTLAwGASGTFWIFAG 413
                        410       420
                 ....*....|....*....|....
gi 213021148 468 VCVVCAI-SAFTLPiETKGRALQQ 490
Cdd:cd17358  414 ICGLALVfVLLFVP-ETKGKSLEE 436
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
73-235 1.28e-14

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 75.30  E-value: 1.28e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  73 PVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVS 152
Cdd:cd17359   25 PFLQTDFNLTPFLEGLVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLAVG 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 153 GHSqgLIIKT---EFLPTKYRGYMLPLSQVFWLAGSLL------IIGLASVIIPTI--GWRWLIRVASIPGIILIVAFKF 221
Cdd:cd17359  105 GAS--ALVPMyiaEVAPAEIRGRLVSLNQLMIVFGQLLayivnyLIANAGGADWLGaeGWRWMLGLEAIPAILFLLGMLF 182
                        170
                 ....*....|....
gi 213021148 222 IPESARFNVSTGNT 235
Cdd:cd17359  183 IPESPRWLVSKGKP 196
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
86-480 6.42e-14

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 72.78  E-value: 6.42e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  86 VALVTTMVFFGYMVFSILFGLLAD-RYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSG-HSQGLIIKTE 163
Cdd:cd17378   35 VGLPQSSFFVGCLIGSGVLGHLADsSLGRKNLLFLSCLLMALSGIATAFSPNYWVYAFLRFLTGFGRSGiGTCALVLATE 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 164 FLPTKYRGYMLPLSQVFWLAGSLLIIGLAsvIIPTIGWRWLIRVASIPGIILIVAFKFIPesarfnvstgntraalatle 243
Cdd:cd17378  115 PVGPKWRGQVGMSTFFFFVLGFMSLPGIA--YLNGSSWRVLYFWTSIPALIYCILVYLFA-------------------- 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 244 rvakmnrsvmpegklvepvlekrgrfadlldakylRTTLQIWVIWLGISFAYYGVILASAELlerdlvcgsksdsavvvt 323
Cdd:cd17378  173 -----------------------------------RRLLAVMVIGFGIGMVYYGIPLAVGNL------------------ 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 324 ggdsgesqspcychmfAPSDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITM-----GCTALFFLLLNICTSSA--- 395
Cdd:cd17378  200 ----------------KFNIYLSVALNALSELPAFVITAFLLDRFGRRPSLLGFTllsgaSCLLCFVLSIGGTTSLQial 263
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 396 GLIGFLFMlralvAANFNTVYIYTAEVYPTTMR--ALGMGTSGSlcRIGAMVAPFISQVLMSASILgALCLFSSVCVVCA 473
Cdd:cd17378  264 ELVGFFGA-----AGAFNLLYIYTVELFPTCVRnaALGMLRQAL--VVGGIFAPFIVSLGRKNAAL-SFGVFGVAILLLG 335

                 ....*..
gi 213021148 474 ISAFTLP 480
Cdd:cd17378  336 LFALGLP 342
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
60-487 9.43e-14

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 72.61  E-value: 9.43e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  60 VEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIW 139
Cdd:COG2223   16 LAFGVWYLWSVLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWL 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 140 FVFLRTMVGCGVSGH---SQGLIIKteFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIP-GIIL 215
Cdd:COG2223   96 LLLLGLLLGIGGGGSfavGIALVSK--WFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAAFGWRNAFLILGILlLVVA 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 216 IVAFKFIPESARFNVSTgntraalatlervakmnrsvmpegklvepvleKRGRFADLLDAKYLRTTLQIWVIWLGISFAY 295
Cdd:COG2223  174 VLAWLFLRDPPAGAAAA--------------------------------AKASLRDQLEALRDPRFWLLSLLYFGTFGSF 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 296 YGVILASAELLeRDLVCGSKSDSAVVVTGGdsgesqspcychmfapsdyrtmiisTIGEIALNPLNILGINFLGRRLSLS 375
Cdd:COG2223  222 IGFSSWLPPYL-VDQFGLSAATAGLLAALF-------------------------ALLGALGRPLGGWLSDRIGGRRVLL 275
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 376 ITMGCTALFFLLLNICTSSAGL-IGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLM 454
Cdd:COG2223  276 IVFALMALGLLLLALALGSLWLfLVLFLLLGLALGGGNGAVFALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFGALL 355
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 213021148 455 SA--SILGALCLFSSVCVVCAISAFTLPIETKGRA 487
Cdd:COG2223  356 DAtgSYTAAFLVFAVLALVALVLTLLLYRRPRRAA 390
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
88-225 4.58e-13

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 70.30  E-value: 4.58e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  88 LVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVG--CGVSGHSQGLIIkTEFL 165
Cdd:cd17315   38 LVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLGlgVGLASVLVPLYI-SEIA 116
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 213021148 166 PTKYRGYMLPLSQVFWLAGSLL--IIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPES 225
Cdd:cd17315  117 PAKIRGALGTLNQLMITFGILLayLLGLALSLSPPGWWRLMFALAAVPALLQLLLMFFLPES 178
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
45-223 1.48e-12

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 69.11  E-value: 1.48e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  45 RFHIALFLIMGSTGVVEAMeimlIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWG 124
Cdd:COG0738    8 RALIAIYLLFFLWGFATAL----WGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLM 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 125 AYFSLLTSFAPSYIWFVFLRTMVGCG-----VSGHSQGLIiktefLPTKYRGYMLPLSQVFWLAGSLLIIGLASVII--- 196
Cdd:COG0738   84 ALGLLLFALAPSYPLLLLALFLLGLGlglldVAANPYVAA-----LGPETAASRLNLLHAFFSLGALLGPLLGGLLIllg 158
                        170       180
                 ....*....|....*....|....*..
gi 213021148 197 PTIGWRWLIRVASIPGIILIVAFKFIP 223
Cdd:COG0738  159 LSLSWHLPYLILAVLLLLLALLFLRSK 185
MFS_1 pfam07690
Major Facilitator Superfamily;
53-447 3.68e-12

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 67.44  E-value: 3.68e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   53 IMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTS 132
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  133 FAPSYIWFVFLRTMVGCGVSG-HSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIP 211
Cdd:pfam07690  81 FASSLWLLLVLRVLQGLGAGAlFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  212 GIILIVAFKFIPESarfnvstgntraalatlervakmnrsvmPEGKLVEPVLEKRGRFADLLDAKYLRTTLQIWVIWLGI 291
Cdd:pfam07690 161 SLLAAVLLLLPRPP----------------------------PESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLF 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  292 SFAYYGVILASAELLERdlvcgsksdsavvvtggdsgesqspcyCHMFAPSDYRTMIISTIGEIALNPLNILGINFLGRR 371
Cdd:pfam07690 213 GFAFFGLLTYLPLYQEV---------------------------LGLSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRR 265
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 213021148  372 LSLSITMG---CTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAP 447
Cdd:pfam07690 266 RRLLLALLlliLAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALGP 344
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
70-479 7.99e-12

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 66.91  E-value: 7.99e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  70 VVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGC 149
Cdd:PRK11551  36 VAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGV 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 150 GVSGHSQGLI-IKTEFLPTKYRGymlplsqvfwLAGSLLIIG------LASVI-----IPTiGWRWLIRVASI-PGIILI 216
Cdd:PRK11551 116 GLGGALPNLIaLTSEAVGPRLRG----------TAVSLMYCGvpfggaLASVIgvlaaGDA-AWRHIFYVGGVgPLLLVP 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 217 VAFKFIPESARFNVSTGNTRAALATLErvakmnrsvmpegklvepVLEKRGRfadlldakyLRTTLQIWVIWLGISFAYY 296
Cdd:PRK11551 185 LLMRWLPESRAFAQAAGAGKQRAPVLR------------------ALFGEGR---------ATATLLLWISYFFTLIVLY 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 297 GVI--LASAeLLERDLvcgSKSDSAVVVTGGDSGesqspcychmfapsdyrtmiiSTIGEIALNPLnilgINFLGRRLSL 374
Cdd:PRK11551 238 FLLnwLPSL-LVGQGL---SRSQAGLVQIAFNIG---------------------GALGSLLIGAL----MDRLRPRRVV 288
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 375 SITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLM 454
Cdd:PRK11551 289 LLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLL 368
                        410       420
                 ....*....|....*....|....*..
gi 213021148 455 SASILGALCLFSS--VCVVCAISAFTL 479
Cdd:PRK11551 369 ALGRSTVGVIGASipVILVAALAALLL 395
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
85-228 4.38e-11

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 64.68  E-value: 4.38e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGL-IIKTE 163
Cdd:cd17362   40 QSGLVVSGSLLGALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSYPVLLVGRLIYGVGIGLAMHAApVYIAE 119
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 213021148 164 FLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTI-GWRWLIRVASIPGIILIVAFKFIPESARF 228
Cdd:cd17362  120 TSPSHIRGLLVSLKELFIVLGILLGYVSGYAFADVVgGWRYMYGLAAPPALLLGIGMWFLPPSPRW 185
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
68-223 8.61e-11

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 63.36  E-value: 8.61e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  68 IAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYG-RWKILLISFLWGAyFSLLTSFAPSYIWFVFLRTM 146
Cdd:cd17319   22 ISVAAPTIMKDLGLSPTQYGLIASAFFLGYALFQVPGGWLLDRFGaRKVLAVSMLLWSL-FTALTGFATSLTSLYVLRFL 100
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 213021148 147 VGCGVSGHSQGLI-IKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIIL-IVAFKFIP 223
Cdd:cd17319  101 LGVAEAGFFPGAIkALAEWFPARERGRATGLFNSGAPLGAAIGPPLSGWLLLLFGWRWAFIIEGLLGLLLaVLWWFYLR 179
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
80-227 2.28e-10

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 62.29  E-value: 2.28e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  80 QLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLIS---FLWGAyfsLLTSFAPSYIWFVFLRTMVGCGVSGHSQ 156
Cdd:cd17360   31 VLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLAdalFTIGA---IVMAAAPNKEVLIVGRVLVGLGVGIASM 107
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 213021148 157 G--LIIkTEFLPTKYRGYMLPLSQVFWLAGSLL--IIGLASVIIPtIGWRWLIRVASIPGIILIVAFKFIPESAR 227
Cdd:cd17360  108 TvpLYI-AEAAPPRIRGRLVTINVLFITGGQFVayVINGAFSYLP-GGWRWMLGLAAVPAVLQFIGLLFLPESPR 180
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
85-479 2.98e-10

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 61.82  E-value: 2.98e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQ-GLIIKTE 163
Cdd:cd17325   32 QIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGLASAAVWPaAMALIAD 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 164 FLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGII-LIVAFKFIPESARFNVSTGNTRAALATL 242
Cdd:cd17325  112 IAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGYRAPFLVCAALALLaLVLALLLLPEPRPPPNKRAVSAARLRSG 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 243 ERVAKMNRSVmpegklvepvlekrgrfadlldakylrttLQIWVIWLGISFAYYGVILASAeLLERDLVCGSKSDSAVVV 322
Cdd:cd17325  192 LRLLLRDRRL-----------------------------LALFLAIFVLAFAFGALEPFLP-LYAAELGGLSPAQIGLLF 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 323 TggdsgesqspcychmfapsdyrtmiISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLF 402
Cdd:cd17325  242 G-------------------------AQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLA 296
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 213021148 403 MLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSASILGALCLFSSVCVVCAISAFTL 479
Cdd:cd17325  297 LLGLGLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFATPFLAAAALLLLAAVLFLL 373
MFS_SLC22A16_CT2 cd17375
Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major ...
78-448 3.86e-10

Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 16 (SLC22A16) is also called carnitine transporter 2 (CT2), fly-like putative transporter 2 (FLIPT2), organic cation transporter OKB1, or organic cation/carnitine transporter 6 (OCT6). It is a partially sodium-ion dependent high affinity carnitine transporter. It also transports organic cations such as tetraethylammonium (TEA) and doxorubicin. It is one of several organic cation transporters (OCTs) that falls into the SLC22 (solute carrier 22) family. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. SLC22A16 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340933 [Multi-domain]  Cd Length: 341  Bit Score: 61.30  E-value: 3.86e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  78 EWQL---ENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGH 154
Cdd:cd17375   26 DWDLvcdREWLAKLIQPIFMLGVLLGAVIFGDIADRIGRRPVLWFTSTGQFVFGIAVAFTFDYYSFVIVRFLLAMVSSGY 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 155 -SQGLIIKTEFLPTKYRGYMLPLSQVFWLAGsLLIIGLASVIIPTigWrWLIRVasipgIILIVAFKFIpesarfnvstg 233
Cdd:cd17375  106 lVVVFVYVTEFTGIKARTWASMHVHAFFAVG-IMVVALVGYLVRT--W-WIYQI-----ILSLVTIPFI----------- 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 234 ntraalatlervakmnrsvmpegkLVEPVLEKRgrfadlldakylrtTLQIWVIWLGISFAYYGVILASAELlerdlvcg 313
Cdd:cd17375  166 ------------------------LCCWMLPKR--------------TITVWLIWFTGSLGYYVFSLGSVNL-------- 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 314 sksdsavvvtGGDsgesqspcychmfapsDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTS 393
Cdd:cd17375  200 ----------GGN----------------EYLNLFLVGAVEIPSYIIACIGMDKLGRRNTLAPFLLLSALACMLIMVIPQ 253
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 213021148 394 SAGLIGFLFML--RALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPF 448
Cdd:cd17375  254 DYEVLTIVLSMtgKFAIAIAFGLIYLYTAELYPTIVRSLAVGSGSMMCRVGSVVAPF 310
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
65-219 1.15e-09

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 60.27  E-value: 1.15e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  65 IMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLR 144
Cdd:COG2807   34 ITSVGPLLPEIRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGT 113
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 213021148 145 TMVGCGVsGHSQGL---IIKTEFlPTKyRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIVAF 219
Cdd:COG2807  114 ALIGAGI-AVGNVLlpgLIKRWF-PDR-VGLMTGLYTAAMGLGAALAAGLTVPLAAALGWRGALAVWALLALLALLLW 188
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
86-224 8.46e-09

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 57.20  E-value: 8.46e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  86 VALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVS---GHSQGLIikT 162
Cdd:cd17323   36 ANLGVSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALAPNIAMLIILRFLQGFFGSsplAIGAGTI--A 113
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 213021148 163 EFLPTKYRGYMLPLSQVFWLAGSLL--IIGlaSVIIPTIGWRWLIRVASI-PGIILIVAFKFIPE 224
Cdd:cd17323  114 DLFTPEERGKAMGVYSLGPLLGPALgpIIG--GFITQSLGWRWIFWFLAIiSGFCLILIFLFLPI 176
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
66-479 8.96e-09

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 57.20  E-value: 8.96e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  66 MLIAVVSPV---IRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVF 142
Cdd:cd17474   13 LGVSIVDPIlpaIAEALGASPAQVGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 143 LRTMVGCGVSG-HSQGLIIKTEFLPTKYRgymlplSQVFWLAGSLLIIGLASV-----IIPTIGWRWLIRVASIPGIILI 216
Cdd:cd17474   93 GRALQGIGAAGlGPLALTLIGDLFEGGER------AKAMGLYEAALGLGIAVGpllggLLAAISWRYPFFLLAALIPVAF 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 217 VAFKFIPESarfnvstgntraalatlervakmnrsvmPEGKLVEPVLEKRGRFADLLDAKYLRTTLqiWVIWLGIsFAYY 296
Cdd:cd17474  167 LAILFLLPE----------------------------PKEKAKSSSATKLRDLKKALRGRGLLTFL--VSAFLYF-FLYF 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 297 GVILASAELLERDLvcgsksDSAVVVTGGdsgesqspcychMFAPSDYRTMIISTIGEIALNPlnilginFLGRRLSLSI 376
Cdd:cd17474  216 AFLTYLPFLLELLY------GISPIIIGL------------LFAGWSVLLALGSLFVGRLLKK-------RFGARRILVI 270
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 377 TMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSA 456
Cdd:cd17474  271 GLLLYALSLLLLGFVPSLALLLIAIVLFGLGLGLNLPLLTTLVTELAPEEERGTASSLYNFVRFLGQAVGPLLFGLLLEI 350
                        410       420
                 ....*....|....*....|...
gi 213021148 457 SILGALCLFSSVCVVCAISAFTL 479
Cdd:cd17474  351 FGLSAPFLVGAAIALAAAVLLAL 373
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
84-480 1.24e-08

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 56.81  E-value: 1.24e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  84 WQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSG---HSQGLIi 160
Cdd:cd17473   35 LLVPLLLTLPALFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGimtLATALI- 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 161 kTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIpTIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALA 240
Cdd:cd17473  114 -GDYFEGEERAKMLGLQSAAMSLGGVVFLLLGGALA-EIGWRAPFLVYLLALPVLILVLLFLPEPARKSKSAASPGAATA 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 241 TlervAKMNRSVMPegklvepvlekrgrfadlldakylrttlqIWVIWLGISFAYYGVILASAELLERDLVCGSKSDSAV 320
Cdd:cd17473  192 A----ALPWKRVLP-----------------------------IYFLAFLAMLLFYVIPIQLPFLLQERGGGSAALIGLA 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 321 VVTGGdsgesqspcychmfapsdyrtmIISTIGEIALNPLnilgINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGF 400
Cdd:cd17473  239 LAIAS----------------------LAGAIGALLFGRL----KRRLGKRRLLAIGFALMALGFLLLALASGLWVVLLG 292
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 401 LFMLRALVAANFNTVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSA--SILGALCLFSSVCVVCAISAFT 478
Cdd:cd17473  293 AILAGLGFGLLLPTLNSWAMSLVPPELRGRAMGIVTSAFFLGQFLSPLVLGPLVNLtgGLSGAFLILGVLALVLAIVLLL 372

                 ..
gi 213021148 479 LP 480
Cdd:cd17473  373 LR 374
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
68-245 2.57e-08

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 55.71  E-value: 2.57e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  68 IAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYG-RWKILLISFLWGAYFsLLTSFAPSYIWFVFLRTM 146
Cdd:cd17475   15 IPALAPFLQEDLHLSLAQVGLLLSALNLGVAVSMLPAGWLLDRFGeRRVLAVGLLLMGAAA-LLMALVGSYPVLLVLLFL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 147 VGCGVSG-HSQGLIIKTEFLPTKYRGYMLPLSQvfwlAGSLLIIGLASVIIPTI----GWRWLIRVASIPGIIL-IVAFK 220
Cdd:cd17475   94 VGAGYGSvQPGGGRAIMRWFPPRERGLAMGIRQ----TGVPLGGALAAALLPPLalhyGWRAAFVVAGLVSILAaVLFWL 169
                        170       180
                 ....*....|....*....|....*
gi 213021148 221 FIPESARFNVSTGNTRAALATLERV 245
Cdd:cd17475  170 FYREPPAASAATESASTLLRSLKEV 194
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
63-242 3.20e-08

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 55.66  E-value: 3.20e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  63 MEIMLIAVVsPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVF 142
Cdd:cd17504   11 VETMLSPAL-PTIQREFGTSAAAVSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIA 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 143 LRTMVGCGVSGHSQGLIIKTEFLPTKyrgyMLPLSQVfWLAGSLLIIG-----LASVIIPTIGWRWLIRVASIPGIILIV 217
Cdd:cd17504   90 GRALQGIGGAVFPLAFALVREEFPPE----RVPVAQG-ILSATFGIGAgiglpLGGWIVQHLGWRWIFWTAAPVAVLLAA 164
                        170       180
                 ....*....|....*....|....*..
gi 213021148 218 AFKFIPES--ARFNVSTGNTRAALATL 242
Cdd:cd17504  165 LVPLIDLRllRRRNVLLANITALLAGF 191
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
34-491 3.89e-08

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 55.50  E-value: 3.89e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   34 VEDAVETIGFGRFHIALFLIMGSTGVVEAMEIMLIAVVSPVI-RCEWQ----LENWQVALVTTMVFFGYMVFSILFGLLA 108
Cdd:TIGR00887   1 ALEEADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLgYVYYHgkgpLPSSVSAAVNGSASIGTLAGQLFFGWLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  109 DRYGRWKILLISFLWGAYFSLLTSFAPSY------IWFVFLRTMVGCGVSG-HSQGLIIKTEFLPTKYRGYMlpLSQVF- 180
Cdd:TIGR00887  81 DKLGRKRVYGMELIIMIIATVASGLSPGSspksvmATLCFWRFWLGVGIGGdYPLSAIITSEFATKKWRGAM--MAAVFa 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  181 -----WLAGSLLII-----------------GLASVIIPTIG--WRWLIRVASIPGIILIVAFKFIPESARFNVSTG-NT 235
Cdd:TIGR00887 159 mqgfgILAGAIVALivlagfkhsleaaadeaSCTGSCVPAVDymWRILIGFGAVPALLALYFRLTIPETPRYTADVAkDV 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  236 RAALATLERVAKMNRSVMPE-----GKLVE-PVLEKRGRFADLLDAKYLRTTLQIWVIWLGISFAYYGVILASAELLerd 309
Cdd:TIGR00887 239 EQAASDMSAVLQVKIEAEPDevekaSTAVEvPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVIL--- 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  310 lvcgsksdSAVvvtgGDSGESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLN 389
Cdd:TIGR00887 316 --------SAI----GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLG 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  390 ICTSSAGLIGFLFMLR-ALVAANFN---TVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSAS-------- 457
Cdd:TIGR00887 384 FAYNHLSTHGFLAIYVlAQFFANFGpnaTTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGdptkgypt 463
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|
gi 213021148  458 ------ILGALCLFSSVCVVCaisAFTLPiETKGRALQQI 491
Cdd:TIGR00887 464 giwmghVLEIFALFMFLGILF---TLLIP-ETKGKSLEEL 499
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
52-242 5.49e-08

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 54.86  E-value: 5.49e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  52 LIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLT 131
Cdd:cd17324    2 LALALAAFAIGTTEYVIQGLLPDIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 132 SFAPSYIWFVFLRTMVGCGVSGH-SQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASI 210
Cdd:cd17324   82 ALAPSFALLLLARALAGLAHGGFwAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIAV 161
                        170       180       190
                 ....*....|....*....|....*....|...
gi 213021148 211 PGIILIVAF-KFIPESARFNVSTGNTRAALATL 242
Cdd:cd17324  162 LALLAALLLwRLLPSLPPKKPGSLGLLSSLLLL 194
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
78-211 1.53e-07

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 53.24  E-value: 1.53e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  78 EWQL---ENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGH 154
Cdd:cd17445   27 EWDLvcsRYWLVPLEQVCFILGFASGYLCLGYTADRLGRRRTLLLSLTLAVPFGVLVAVAASPSLFMAMRFLLGAALAGV 106
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 213021148 155 SQGL-IIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLAsviIPTIGWRWLIRVASIP 211
Cdd:cd17445  107 YLTLyLTRLELCDPPQRLLVAMAGGLTMVGGHFLLLGLA---LGCGSWRVLQGTITAP 161
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
11-219 2.05e-07

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 52.96  E-value: 2.05e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  11 ILSLRKLSLGTAEPQVKEPKTFTVEDAVETIGFGRFHIALFLIMGSTGVVEAMeimLIAVVSPVIRCEWQLENWQVALVT 90
Cdd:cd17325  165 VLALLLLPEPRPPPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGA---LEPFLPLYAAELGGLSPAQIGLLF 241
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  91 TMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVS-GHSQGLIIKTEFLPTKY 169
Cdd:cd17325  242 GAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGlVFPATLALLADIVPPEG 321
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 213021148 170 RGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIVAF 219
Cdd:cd17325  322 RGTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFATPFLAAAALLLLAAVLF 371
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
85-210 3.12e-07

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 52.63  E-value: 3.12e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIKTEF 164
Cdd:cd06179   33 NSTWISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVNMLIGGQALIGIGAGTQGLGAAVASEL 112
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 213021148 165 LPTKYRGYMLPLSQVFWLAGSLL--IIGLASVIIPTIGWRWLIRVASI 210
Cdd:cd06179  113 VPNKYRGLVQGVVNLVASPGSALgpLIAGALVEANAAGWRWIFYINAI 160
MFS_GLUT_Class1 cd17431
Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
96-236 3.30e-07

Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-4 are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT1, also called solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1), displays broad substrate specificity and can transport a wide range of pentoses and hexoses including glucose, galactose, mannose, and glucosamine. It is found in the brain, erythrocytes, and in many fetal tissues. GLUT2 (or SLC2A2) is found in the liver, islet of Langerhans, intestine, and kidney, and is the isoform that likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by beta cells. GLUT3 (or SLC2A3) is found in the brain and can mediates the uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and dehydroascorbate. GLUT4 (or SLC2A4) is an insulin-regulated facilitative glucose transporter found in adipose tissues, and in skeletal and cardiac muscle. GLUT14 (or SLC2A14) is an orphan transporter expressed mainly in the testis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340989 [Multi-domain]  Cd Length: 445  Bit Score: 52.72  E-value: 3.30e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  96 GYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSF---APSYIWFVFLRTMVGCgVSGHSQGLI--IKTEFLPTKYR 170
Cdd:cd17431   62 GGMIGSFSVGLFVNRFGRRNSMLYNNLLAFAGAALMGLsklAKSYEMLILGRFIIGL-YCGLTTGLVpmYIGEISPTALR 140
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 213021148 171 GYMLPLSQVFWLAGSLL--IIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTR 236
Cdd:cd17431  141 GALGTLHQLGIVVGILIsqIFGLEFILGTEELWPLLLGFTIVPAILQLALLPFCPESPRYLLINRNEE 208
MFS_SLC17 cd17318
Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The ...
94-219 3.31e-07

Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The Solute carrier 17 (SLC17) family is primarily involved in the transport of organic anions. There are nime human proteins belonging to this family including: the type I phosphate transporters (SLC17A1-4) that were initially identified as sodium-dependent inorganic phosphate (Pi) transporters but are now known to be involved in tha transport of organic anions; lysosomal acidic sugar transporter (SLC17A5 or sialin), vesicular glutamate transporters (VGluT1#3 or SLC17A7, SLC17A6, and SLC17A8, respectively), and a vesicular nucleotide transporter (VNUT or SLC17A9). SLC17A1 and SLC17A3 have roles in the transport of urate and para-aminohippurate, respectively. The SLC17 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340876 [Multi-domain]  Cd Length: 389  Bit Score: 52.24  E-value: 3.31e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  94 FFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAP--SYIWFVFLRTMVGCGvsghsQGLI------IKTEFL 165
Cdd:cd17318   66 FYGYILTQIPGGYLAEKYGAKRVLGYSILITALLTLLTPLAArgGYGALIVLRILQGLA-----QGVTfpamhaLWAKWA 140
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 213021148 166 PTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIVAF 219
Cdd:cd17318  141 PPLERSRLTSIAYSGSQFGTVIAMPLSGFLCESLGWPSIFYIFGGLGLLWCLLW 194
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
85-226 3.99e-07

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 52.19  E-value: 3.99e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGhsqGLIIKTEF 164
Cdd:cd17320   35 AVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLIARFLQGLGAAA---GSVVARAI 111
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 213021148 165 LPTKYRGymLPLSQVFWLAGslLIIGLASVIIPTIG--------WR---WLIRVASIpgIILIVAFKFIPESA 226
Cdd:cd17320  112 VRDLYSG--AELAKIFSLLM--MILAIAPALAPLLGgllllffgWRaifVFLALLGL--LLLLLVLLFLPETL 178
MFS_SLC22A31 cd17443
Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier ...
78-217 4.33e-07

Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier family 22, member 31 (SLC22A31) is an uncharacterized member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A31 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341001 [Multi-domain]  Cd Length: 343  Bit Score: 51.70  E-value: 4.33e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  78 EWQL---ENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGH 154
Cdd:cd17443   27 EWNLvcdDGWKVPLEKISYLLGWLLGYIILGAGCDRLGRRAAFVLSLVLATLLGVSVALSASPPTFLVLRLLQGGTLAGV 106
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 213021148 155 SQGL-IIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIiptIGWRWLIRVASIPGIILIV 217
Cdd:cd17443  107 FLSLyIARLELCDPSHRLMVSMGAGFFSVAGELLLPGLAVLC---RDWRVLQGVGTLPLLLLLL 167
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
83-491 7.34e-07

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 51.48  E-value: 7.34e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  83 NWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFL-RTMVGCGVSGHS-QGLII 160
Cdd:cd17356   44 SSRQGLIVSIVNLGSFFGALISSFLSDRIGRKKSIQIGCVIYIIGAIIQVAAIGKWYQLIVgRIIAGLGVGFASvLVPVY 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 161 KTEFLPTKYRGYMLPLSQVFWLAGSLLIIGL---ASVIIPTIGWRWLIRVASIPGIILIVAFKFIPESARFnvstgntra 237
Cdd:cd17356  124 QSEVAPKHIRGTLVSLYQLAITIGILVAYCInygTHKLDGSAQWRIPLGLQIVWGLLLLIGMFFLPESPRW--------- 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 238 alatLERVakmnrsvmpegklvepvlekrgrfadlldakYLRTTLQIWVIWLGISFA-YYGV-ILASAELLERDlvcgsk 315
Cdd:cd17356  195 ----LYRT-------------------------------ILGIMLQLFQQLTGINYFfYYGTtIFQSTGLTGSS------ 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 316 sdsavvvtggdsgesqspcychmfapsDYRTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICT--- 392
Cdd:cd17356  234 ---------------------------PLLTSIILYIVNFVSTIPGLFFVDKFGRRTCLLIGAAGMSICLFIYAAVGvry 286
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 393 -------------SSAGLIGFLFMLRALVAANFN-TVYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSASI 458
Cdd:cd17356  287 lipnpqsgtsnksAGNGMIVFICLFIFSFATTWGpIAWVYVAEVFPLRVRSKGMALATAFNWLWNFLISFFTPFIIGSIG 366
                        410       420       430
                 ....*....|....*....|....*....|...
gi 213021148 459 LGALCLFSSVCVVCAISAFTLPIETKGRALQQI 491
Cdd:cd17356  367 FKYYYIFAGCNLLAFIVVFFFVPETKGLTLEEI 399
MFS_GLUT12_Class3 cd17435
Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
85-239 9.96e-07

Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 12 (GLUT12) is also called Solute carrier family 2, facilitated glucose transporter member 12 (SLC2A12). It is a facilitative glucose transporter, classified as a Class 3 GLUT, and is expressed in the heart, skeletal muscle, prostate, and small intestine, and is highly upregulated in breast ductal cell carcinoma. It plays a role as a secondary insulin-sensitive glucose transporter in insulin-dependent tissues. The GLUT12 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340993 [Multi-domain]  Cd Length: 376  Bit Score: 50.95  E-value: 9.96e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVS-GHSQGLIIKTE 163
Cdd:cd17435   37 EQEMVVSSLLIGALLASLTGGVLIDRYGRRTAIILTSCLLVLGSLLLVCSVSYTVLIVGRIAIGVSISlSSIATCVYIAE 116
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 213021148 164 FLPTKYRGYMLPLSQVFWLAGSLL--IIGLASVIIPTiGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAAL 239
Cdd:cd17435  117 IAPQHRRGLLVSLNELMIVIGILLayISNYAFANVSN-GWKYMFGLVIPLAALQAIAMYFLPPSPRFLVMKDNMRARL 193
PRK03893 PRK03893
putative sialic acid transporter; Provisional
67-228 1.36e-06

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 50.85  E-value: 1.36e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  67 LIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYiWFVFL-RT 145
Cdd:PRK03893  38 LITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGY-WTLFIaRL 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 146 MVGCGVSGH---SQGLIIktEFLPTKYRGYmlplSQVFWLAGSLLIIGLA----SVIIPTIGWRWLIRVASIPGIILIVA 218
Cdd:PRK03893 117 VIGMGMAGEygsSATYVI--ESWPKHLRNK----ASGFLISGFSIGAVVAaqvySLVVPVWGWRALFFIGILPIIFALWL 190
                        170
                 ....*....|
gi 213021148 219 FKFIPESARF 228
Cdd:PRK03893 191 RKNLPEAEDW 200
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
88-219 2.22e-06

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 49.57  E-value: 2.22e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  88 LVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVG--CGVSGHSQGLIIKTefL 165
Cdd:cd17391   40 LAFSSTFLVSAIFSPIWGRLADRYGRKPMLLRASLGMAIVIGLMAFVTNVWQLLILRLLQGvfSGYVPNATALIASQ--T 117
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 213021148 166 PTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRwliRVASIPGIILIVAF 219
Cdd:cd17391  118 PKEKSGWALGTLSTGVVAGTLIGPLLGGFLADLFGIR---NVFFITGGLLFLAF 168
MFS_GLUT10_Class3 cd17436
Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
58-236 2.94e-06

Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 10 (GLUT10) is also called Solute carrier family 2, facilitated glucose transporter member 10 (SLC2A10). It is classified as a Class 3 GLUT and is a facilitative glucose transporter that exhibits a wide tissue distribution. It is expressed in pancreas, placenta, heart, lung, liver, brain, fat, muscle, and kidney. GLUT10 facilitates the transport of dehydroascorbic acid (DHA), the oxidized form of vitamin C, into mitochondria, and also increases cellular uptake of DHA, which in turn protects cells against oxidative stress. Loss-of-function mutations in SLC2A10 cause arterial tortuosity syndrome (ATS), an autosomal recessive connective tissue disorder characterized by twisting and lengthening of the major arteries, hypermobility of the joints, and laxity of skin. The GLUT10 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340994 [Multi-domain]  Cd Length: 376  Bit Score: 49.41  E-value: 2.94e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  58 GVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSY 137
Cdd:cd17436   10 GLTFGYELGIISGALLQLQTDFSLSCFEQEALVSALLIGALLASLIGGFLIDRHGRRTSILGSNLVLLAGSLILTLAGSF 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 138 IWFVFLRTMVGCGVSGHSQGL-IIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTI-GWRWLIRVASIPGIIL 215
Cdd:cd17436   90 FWLVIGRAVVGFAISVSSMACcIYVSEMVTPHQRGLLVSLYEAGITVGILISYALNYFFSNVLtGWRYMFGLAIIPAAIQ 169
                        170       180
                 ....*....|....*....|.
gi 213021148 216 IVAFKFIPESARFNVSTGNTR 236
Cdd:cd17436  170 FASILLLPKKPEVLNIKDNMR 190
MFS_STP cd17361
Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; ...
88-225 3.07e-06

Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; The plant Sugar transport protein (STP) subfamily includes STP1-STP14; they are also called hexose transporters. They mediate the active uptake of hexoses such as glucose, 3-O-methylglucose, fructose, xylose, mannose, galactose, fucose, 2-deoxyglucose and arabinose, by sugar/hydrogen symport. Several STP family transporters are expressed in a tissue-specific manner, or at specific developmental stages. STP1 is the member with the highest expression level of all members and high expression is detected in photosynthetic tissues, such as leaves and stems, while roots, siliques, and flowers show lower expression levels. It plays a major role in the uptake and response of Arabidopsis seeds and seedlings to sugars. The STP subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340919 [Multi-domain]  Cd Length: 390  Bit Score: 49.17  E-value: 3.07e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  88 LVTTMVFFGYMVFSILFGLLADRYGRWKILLI---SFLWGAyfsLLTSFAPSyIWFVFL-RTMVGCGVSGHSQGL-IIKT 162
Cdd:cd17361   55 LFTSSLYLAGLVASLLASYVTRKWGRKPSMLIggvLFLVGA---ALNAAAQN-IAMLIVgRILLGFGVGFGNQAVpLYLS 130
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 213021148 163 EFLPTKYRGYMLPLSQVFWLAGSLL--IIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPES 225
Cdd:cd17361  131 EMAPAKLRGALNIGFQLAITIGILIanLINYGTSKIKPNGWRLSLGLAAVPALILLLGSLFLPET 195
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
98-228 5.04e-06

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 48.55  E-value: 5.04e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  98 MVFSILFGLLADRYGR-WKILLIS--FLWGAyfsLLTSFAPSYIWFVFLRTMVGCGVSghsQGLIIK----TEFLPTKYR 170
Cdd:cd17437   46 LVGSLAAGRTSDWIGRrYTIALAAliFFVGA---LLMGVAPNYPVLMVGRFVAGIGVG---FALMIApvytAEVAPASSR 119
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 213021148 171 GYMLPLSQVFWLAGSLL--IIGLASVIIPT-IGWRWLIRVASIPGIILIVAFKFIPESARF 228
Cdd:cd17437  120 GFLTSFPEIFINIGILLgyVSNYAFSGLPLhVGWRLMLGVGAVPSLFLAIGVLAMPESPRW 180
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
67-247 5.17e-06

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 48.71  E-value: 5.17e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  67 LIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTM 146
Cdd:cd17478   14 FLPALLPLLIAKLGLSYAQAGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLLLVAL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 147 VGCGVSG-HSQGLIIKTEFLPTKYRGYMlplsQVFWLAGSL------LIIGLASVIIPTIGWRWLIRVASIpgIILIVAF 219
Cdd:cd17478   94 AGIGSAAfHPEGARLASQAAGGRRGLAM----SIFSVGGNLgfalgpLIAAALVALFGGLGLLILLIIPGL--AVALLLL 167
                        170       180
                 ....*....|....*....|....*...
gi 213021148 220 KFIPESARFNVSTGNTRAALATLERVAK 247
Cdd:cd17478  168 RLRPLKKPEAKKAAAKSSARSTLKGVWR 195
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
62-217 1.69e-05

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 46.78  E-value: 1.69e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  62 AMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFV 141
Cdd:cd17321    9 ALDVTIVNVALPTIARDLGASPSQLQWVVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLI 88
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 213021148 142 FLRtmVGCGVSGH---SQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIV 217
Cdd:cd17321   89 AAR--ALQGIGAAaimPASLALIAATFPGERRGRALGLWGAVVGIGAALGPLLGGLLLELFGWRWIFLINVPIGLVALL 165
MFS_GLUT_Class2 cd17432
Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
88-244 4.35e-05

Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT5, also called Solute carrier family 2, facilitated glucose transporter member 5 (SLC2A5), is a well-established fructose transporter found in the small intestine. GLUT7 (or SLC2A7) is a high-affinity glucose and fructose transporter expressed in the small intestine and colon. GLUT9 (or SLC2A9) transports urate and fructose, and is most strongly expressed in the basolateral membranes of proximal renal tubular cells, liver and placenta. It may play a role in urate reabsorption by proximal tubules. GLUT11 (or SLC2A11) is a facilitative glucose transporter expressed in heart and skeletal muscle. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340990 [Multi-domain]  Cd Length: 452  Bit Score: 45.68  E-value: 4.35e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  88 LVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSF---APSYIWFVFLRTMVG--CGVSGHSQGLIIkT 162
Cdd:cd17432   54 LTVSIFPLGGLFGSLLVGPLVIRLGRKGTLLLNNIFAIVAAILMGLskiAKSFEMIIVGRFLVGinAGISLNVVPMYL-G 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 163 EFLPTKYRGYMLPLSQVFWLAGSLL--IIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPESARFN-VSTGNTRAAL 239
Cdd:cd17432  133 ESAPKNLRGAVGLVPAIFITLGILLgqVLGLRELLGNEEGWPLLLALTGVPALLQLLTLPFFPESPRYLlIEKGDEEAAR 212

                 ....*
gi 213021148 240 ATLER 244
Cdd:cd17432  213 KALQR 217
MFS_GLUT8_Class3 cd17433
Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
80-242 5.42e-05

Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 8 (GLUT8) is also called Solute carrier family 2, facilitated glucose transporter member 8 (SLC2A8) or glucose transporter type X1 (GLUTX1). It is classified as a Class 3 GLUT protein and is an insulin-regulated facilitative glucose transporter predominantly expressed in testis and brain. It can also transport fructose and galactose. SLC2A8 knockout mice were viable, developed normally, and display only a very mild phenotype, including mild alterations in the brain (increased proliferation of hippocampal neurons), heart (impaired transmission of electrical wave through the atrium), and sperm cells (reduced number of motile sperm cells). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340991 [Multi-domain]  Cd Length: 416  Bit Score: 45.64  E-value: 5.42e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  80 QLENWQVALVTTMVFFGYMVFSILFGLLADRYGR-WKILLISFLWGAYFSLLTsfAPSYIWFVF---LRTMVGCGVSGHS 155
Cdd:cd17433   37 RLDDAAASWFGSVVTLGAAAGGVLGGWIVDRAGRkLSLMLCSVPFIAGFTVIT--AAQNVWMLYvgrLLTGLASGVTSLV 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 156 QGLIIkTEFLPTKYRGYMLPLSQVFWLAGslliIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNT 235
Cdd:cd17433  115 VPVYI-SEIAHPRVRGTLGSCVQLMVVIG----IMGAYLAGLVLDWRWLAVLGSIPPTLMLLLMCFMPETPRFLLTQHRR 189

                 ....*..
gi 213021148 236 RAALATL 242
Cdd:cd17433  190 QEAMAAL 196
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
85-203 7.11e-05

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 44.86  E-value: 7.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLIS---FLWGayfSLLTSFAPSYIWFVFLRTMVGCGVSGHSQG-LII 160
Cdd:cd17502   31 LVSWVGTAYLLTSTAFQPIYGKLSDLFGRKWVLLIAiviFELG---SLLCGLAPNMTMLIVGRAIQGIGGGGLMSLaFII 107
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 213021148 161 KTEFLPTKYRGYMLPLSQVFWLAGSLL--IIGlaSVIIPTIGWRW 203
Cdd:cd17502  108 IADLVPPRERGKYQGYIGAVFGIASVAgpLIG--GAFTDHLSWRW 150
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
94-221 8.91e-05

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 44.47  E-value: 8.91e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  94 FFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAP--SYIWFVFLRTMVGCGvsghsQGLIIKTEF------L 165
Cdd:cd17380   44 FWGYALTQVLGGYLADRFGGKKVLLLAVALWSLATLLTPLLAysSLPLLILSRILLGLG-----EGVHFPSMTslfsrwV 118
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 213021148 166 PTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIVAFKF 221
Cdd:cd17380  119 PVSERSRAVSIVTAGSYLGTLLGGLIGPLLLEYYGWPSVFYFFGLLGLLWALVWLI 174
xylE PRK10077
D-xylose transporter XylE; Provisional
105-245 9.00e-05

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 45.07  E-value: 9.00e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 105 GLLADRYGRWKILLIS---FLWGAYFS-----LLTSFAP---SYIW-FVFLRTMVGCGV---SGHSQGLIikTEFLPTKY 169
Cdd:PRK10077  76 GYCSNRFGRRDSLKIAavlFFISALGSawpefGFTSIGPdntGYVPeFVIYRIIGGIGVglaSMLSPMYI--AEIAPAHI 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 170 RGYMLPLSQVFWLAGSLLII--------GLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALAT 241
Cdd:PRK10077 154 RGKLVSFNQFAIIFGQLVVYfvnyfiarSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGI 233

                 ....
gi 213021148 242 LERV 245
Cdd:PRK10077 234 LRKI 237
PRK12307 PRK12307
MFS transporter;
59-225 9.62e-05

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 44.53  E-value: 9.62e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  59 VVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYI 138
Cdd:PRK12307  28 VFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVI 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 139 WFVFLRTMVGCGVSGHsqgLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTI----GWRWLIRVASIPGII 214
Cdd:PRK12307 108 MLTLSRFIVGMGMAGE---YACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFaeayGWRAAFFVGLLPVLL 184
                        170
                 ....*....|.
gi 213021148 215 LIVAFKFIPES 225
Cdd:PRK12307 185 VIYIRARAPES 195
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
62-244 1.19e-04

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 44.23  E-value: 1.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  62 AMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFV 141
Cdd:cd17333    9 GLTDALLGILGPSLEEAFNLNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFATPSIYLFV 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 142 FLRTMVGCGVS-GHSQGLIIKTEFLPTKyRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGW----RWLIRVASIPGIILI 216
Cdd:cd17333   89 VLMFLAGLGAGiLDTGANTFVGALFEES-SATRLNVLHGFFGLGALIGPLIATSLLTSELSwswaYLIIGLIYLLLAILI 167
                        170       180
                 ....*....|....*....|....*...
gi 213021148 217 VAFKFIPESARFNVSTGNTRAALATLER 244
Cdd:cd17333  168 LLTLFPELPSARNPQQSVGAFSASASRL 195
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
22-227 2.14e-04

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 43.72  E-value: 2.14e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  22 AEPQVKEPKTFTVEDAVETIGFGRFHIALFLIMGSTGvveaMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFS 101
Cdd:COG2223  183 PPAGAAAAAKASLRDQLEALRDPRFWLLSLLYFGTFG----SFIGFSSWLPPYLVDQFGLSAATAGLLAALFALLGALGR 258
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 102 ILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIKT--EFLPTKYRGYMLPL-SQ 178
Cdd:COG2223  259 PLGGWLSDRIGGRRVLLIVFALMALGLLLLALALGSLWLFLVLFLLLGLALGGGNGAVFALvpDIFPTKNAGAVYGLvGA 338
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 213021148 179 VFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPESAR 227
Cdd:COG2223  339 AGGLGGFLGPLLFGALLDATGSYTAAFLVFAVLALVALVLTLLLYRRPR 387
MFS_Amf1_MDR_like cd17476
Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole ...
50-153 2.16e-04

Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole resistance protein Atr1p, and similar transporters of the Major Facilitator Superfamily; Saccharomyces cerevisiae Amf1p/Ammonium Facilitator 1/YOR378W functions as a low affinity NH4+ transporter. S. cerevisiae aminotriazole resistance protein (Atr1p) is required for controlling sensitivity to aminotriazole; it is a putative component of the machinery responsible for pumping aminotriazole (and possibly other toxic compounds) out of the cell. This subfamily also includes S. cerevisiae YMR279C, a putative boron transporter involved in boron efflux and resistance, and Kluyveromyces lactis Knq1p which is involved in oxidative stress response and iron homeostasis. Amf1p, Atr1p, and YMR279C have been classified as group 1 members of the DHA2 (Drug:H+ Antiporter family 2) family, K. lactis Knq1 as group 2. This subfamily also includes two Aspergillus terreus terrein biosynthesis cluster proteins, efflux pump TerG and TerJ which may be required for efficient secretion of terrein or other secondary metabolites produced by the terrein gene cluster. The Amf1p-like subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341029 [Multi-domain]  Cd Length: 362  Bit Score: 43.40  E-value: 2.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  50 LFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTtmvffgymvFSILFGLLADRYGRWKILLISFLWGAYFSL 129
Cdd:cd17476    8 LLNQAGLGSVIVILPIIGDSFGTSPNQLSWLAASYSLTVGT---------FILIFGRLGDIYGHKKMFVIGSFWFAIWSL 78
                         90       100
                 ....*....|....*....|....
gi 213021148 130 LTSFAPSYIWFVFLRTMVGCGVSG 153
Cdd:cd17476   79 IAGFSPNFIFFIICRALQGLGPAF 102
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
66-225 2.64e-04

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 43.03  E-value: 2.64e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  66 MLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRT 145
Cdd:cd17312   20 KNFSVAKPPIVEEIGLSKDDLGIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVLWG 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 146 MVGCGVS-GHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIIL-IVAFKFIP 223
Cdd:cd17312  100 LNGLFQSmGWPPCVKLLGNWFSKKERGTVYGIWSTSHNFGGILAPILAASLASYYGWRAAFLVPGIVGLVVaIILFFFLR 179

                 ..
gi 213021148 224 ES 225
Cdd:cd17312  180 DS 181
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
106-276 3.51e-04

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 42.90  E-value: 3.51e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 106 LLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGC--GVSGHSQGLIIkTEFLPTKYRGYMLPLSQVFWLA 183
Cdd:cd17434   63 FLNDRLGRKLSIMFSAVPSALGYLLMGSAQGIWMLLLGRFLTGFagGITAASIPVYV-SEISHPGVRGALGACPQIMAVF 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 184 GSLLIIGLAsVIIPtigWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNRSVMPEGKLVEPVL 263
Cdd:cd17434  142 GSLALYALG-LLLP---WRWLAVAGEVPVVIMILLLCFMPNSPRFLISKGKDEKALKALAWLRGPNTDYMTEFEQIKDNI 217
                        170
                 ....*....|...
gi 213021148 264 EKRGRFADLLDAK 276
Cdd:cd17434  218 RKQSSRLSWAELK 230
efflux_EmrB TIGR00711
drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a ...
48-224 4.54e-04

drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]


Pssm-ID: 129794 [Multi-domain]  Cd Length: 485  Bit Score: 42.75  E-value: 4.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148   48 IALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTmvffGYMVFSI----LFGLLADRYGRWKILLISFLW 123
Cdd:TIGR00711   1 LLLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVIT----SYMLANAisipLTGWLAKRFGTRRLFLISTFA 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  124 GAYFSLLTSFAPSYIWFVFLRTMVGCGvSGHSQGLIIKTEFL--PTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGW 201
Cdd:TIGR00711  77 FTLGSLLCGVAPNLELMIIFRVIQGFG-GGPLIPLSFSTLLNiyPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHW 155
                         170       180
                  ....*....|....*....|....
gi 213021148  202 RWLIRVASIPGII-LIVAFKFIPE 224
Cdd:TIGR00711 156 RWIFLINVPIGIIvVVVAFFILPR 179
MFS_FEN2_like cd17327
Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; ...
85-228 8.94e-04

Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; This family is composed of Saccharomyces cerevisiae pantothenate transporter FEN2 (or fenpropimorph resistance protein 2) and similar proteins from fungi and bacteria including fungal vitamin H transporter, allantoate permease, and high-affinity nicotinic acid transporter, as well as Pseudomonas putida phthalate transporter and nicotinate degradation protein T (nicT). These proteins are involved in the uptake into the cell of specific substrates such as pathothenate, biotin, allantoate, and nicotinic acid, among others. The FEN2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340885 [Multi-domain]  Cd Length: 406  Bit Score: 41.47  E-value: 8.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKIL-LISFLWGAyFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIkte 163
Cdd:cd17327   42 QYNWGNTVFYVGYIIFELPGNLLLQRFPPSKWLsVFIVLWGL-LTLLTAAVKNFGGLIALRFFLGLFESGVFPGFIL--- 117
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 213021148 164 FLPTKYRGYMLPLSQVFWLAGSLLIIGLASVI---------IPTI-GWRWLI----RVASIPGIILIVAFKFIPESARF 228
Cdd:cd17327  118 YLGMWYKREEQAKRIAFFYAAAGLGSIFGGLLaygvfkilgVGGLaGWRWLFiiegLITIIIGLVIFFWLPDNPSKAWF 196
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
84-150 1.27e-03

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 41.02  E-value: 1.27e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 213021148  84 WQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCG 150
Cdd:cd17330   34 YYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDGLT 100
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
97-219 1.44e-03

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 40.99  E-value: 1.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  97 YMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGH-SQGLIIKTEFLPTKYRGYMLP 175
Cdd:cd17370  247 YALAAYPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLYMGAQeSIERAAVADLVPAELRGTAYG 326
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 213021148 176 LSQ----VFWLAGSLliigLASVIIPTIGWRWLIRVASIPGIILIVAF 219
Cdd:cd17370  327 LFNtvvgIGWLLASL----IAGYLWDLISPSAAFLFSAVLALIALLLL 370
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
85-254 1.52e-03

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 40.66  E-value: 1.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLI-IKTE 163
Cdd:cd17489   32 VAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFTTAAAtLVAD 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 164 FLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPEsarfNVSTGNTRAALATLE 243
Cdd:cd17489  112 IIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLFIVAAVLALLALLLVFLVKD----PPPVAAEEAEAGTRA 187
                        170
                 ....*....|.
gi 213021148 244 RVAKMNRSVMP 254
Cdd:cd17489  188 FRRLVEKKVLP 198
MFS_SLC22A17_like cd17373
Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; ...
84-225 1.71e-03

Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; This group is composed of Solute carrier family 22, members 17, 23, and 31. They are members of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). SLC22A17 functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. SLC22A23 and SLC22A31 are orphan members of the SLC22 family. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22A17-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340931 [Multi-domain]  Cd Length: 348  Bit Score: 40.58  E-value: 1.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  84 WQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGL-IIKT 162
Cdd:cd17373   25 WKVHLEQFSLLLGLIFGYLILGCIADRFGRRPVLLFSLILILIFGLTVALAVSVTMFSTLRFLEGFCLAGIILTLyLLRL 104
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 213021148 163 EFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIiptIGWRWLIRVASIPGIILIVAFKFIPES 225
Cdd:cd17373  105 ELCDPGKRLMITMVASLVAVAGQFLMPGLAALC---RDWRVLQALIICPFLLMLLYWSIFPKN 164
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
19-153 4.43e-03

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 39.50  E-value: 4.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  19 LGTAEPQVKEPKTFTVEDAVETI----GFGRFHIALFLIMGSTGVVEAMeimliavVSPVIRCEWQLENWQVALVTTMVF 94
Cdd:COG2211  202 FGTKERPVPEEEKVSLKESLKALlknrPFLLLLLAYLLFFLALALVAAL-------LLYYFKYVLGLSAALVGLLLALYF 274
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 213021148  95 FGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAP--SYIWFVFLRTMVGCGVSG 153
Cdd:COG2211  275 LAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLGpgNLWLLLVLAALAGIGLGA 335
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
85-253 4.71e-03

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 39.20  E-value: 4.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  85 QVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSY----IW----FVFLRTMVGCGVSGH-- 154
Cdd:cd17367   41 STAAVFAVGFLMRPIGGWLFGRLADRIGRRAALTLSVSLMAAGSLVIAVTPTYatigIWapiiLLLARLLQGLSVGGEyg 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148 155 -SQGLIikTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIG------WRWliRVASIPGIILIVAFKFI----P 223
Cdd:cd17367  121 tSATYL--SEVAPPGRRGFYSSFQYVTLIGGQLLALGVLLVLQHTLGedqmaaWGW--RIPFLLGGVLAVVVLWLrrglE 196
                        170       180       190
                 ....*....|....*....|....*....|
gi 213021148 224 ESARFNVSTGNTRAALATLERVAKMNRSVM 253
Cdd:cd17367  197 ETESFEAIAESNEASAGTLRELRRHPRELL 226
PRK15402 PRK15402
MdfA family multidrug efflux MFS transporter;
90-150 5.13e-03

MdfA family multidrug efflux MFS transporter;


Pssm-ID: 185300 [Multi-domain]  Cd Length: 406  Bit Score: 39.15  E-value: 5.13e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 213021148  90 TTMVFF--GYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCG 150
Cdd:PRK15402  52 TSMTAYlaGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIG 114
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
86-222 5.26e-03

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 39.18  E-value: 5.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213021148  86 VALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYI------WFVFLRTMVGCGVSG-HSQGL 158
Cdd:cd17364   41 SGLVNAAALVGTIIGQLFFGFLGDRFGRKRVYGVELIIMIIGTILSALSPGSTplgvmgWLIFFRFLLGIGIGGdYPLSA 120
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 213021148 159 IIKTEFLPTKYRGYMLPLSQVFW----LAGSLLIIGLAS----------VIIPTIGWRWLIRVASIPGIILIVAFKFI 222
Cdd:cd17364  121 TIMSEYANKKRRGALIAAVFAMQgfgiLAGAIVTLILSAifehplpagtYHHADLVWRIVLGLGAIPALSVLYFRKHL 198
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH