|
Name |
Accession |
Description |
Interval |
E-value |
| HX |
cd00094 |
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
1102-1362 |
1.13e-44 |
|
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.
Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.13e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 1102 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1180
Cdd:cd00094 1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 1181 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1259
Cdd:cd00094 79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 1260 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1339
Cdd:cd00094 137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174
|
250 260
....*....|....*....|...
gi 735997424 1340 PSRTARAITTRSGqtlSKVWYNC 1362
Cdd:cd00094 175 RSKEVRVGYPLKI---SSDWLGC 194
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
333-798 |
2.05e-25 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 115.42 E-value: 2.05e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 333 APTTPKEPAPTTTKSAPTTPKEPAPTTT-----KEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKePAPtTPKKPAPTTP 407
Cdd:PHA03247 2508 APPAPSRLAPAILPDEPVGEPVHPRMLTwirglEELASDDAGDPPPPLPPAAPPAAPDRSVPPPR-PAP-RPSEPAVTSR 2585
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 408 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP-------------TTPKEPAPTTPKEPAPTTTKEPS 474
Cdd:PHA03247 2586 ARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPspspaanepdphpPPTVPPPERPRDDPAPGRVSRPR 2665
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 475 PTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT-----TPKEPAPTTPKKPAPTTPKEPAP---- 545
Cdd:PHA03247 2666 RARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHalvsaTPLPPGPAAARQASPALPAAPAPpavp 2745
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 546 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeelapttpeEPTPTTPEEPAP 625
Cdd:PHA03247 2746 AGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDP---------ADPPAAVLAPAA 2816
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 626 TTPKAAAPNTPkEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKEPT 701
Cdd:PHA03247 2817 ALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRST 2895
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 702 STTSDKP-APTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPT 780
Cdd:PHA03247 2896 ESFALPPdQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVP 2975
|
490
....*....|....*....
gi 735997424 781 TPKETAPTTPKE-PAPTTP 798
Cdd:PHA03247 2976 RFRVPQPAPSREaPASSTP 2994
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
356-866 |
2.05e-24 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 111.95 E-value: 2.05e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 356 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKpapTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 435
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPD---EPVGEPVHPRMLTWIRGLEELASDDAGDPPP 2553
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 436 TTPKEPAPTAPKKPAPttPKEPAPtTPKEPAPTTTKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 510
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVP--PPRPAP-RPSEPAVTSRARrpdapPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 511 PSPTTTKEPAPTTPKEPAPTTPKK-PAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 589
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 590 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPaPTTPKEPAPTTPKEPAPTTPKETAPTTPK 669
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 670 GTAPTTLKEPAPTTPKK-PAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT-----------------PKE 731
Cdd:PHA03247 2790 SLSESRESLPSPWDPADpPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrpPSR 2869
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 732 PAPTTPKGTA-PTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 810
Cdd:PHA03247 2870 SPAAKPAAPArPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 735997424 811 PTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 866
Cdd:PHA03247 2950 AGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005
|
|
| SO |
smart00201 |
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ... |
25-67 |
1.61e-19 |
|
Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.
Pssm-ID: 197571 Cd Length: 43 Bit Score: 82.81 E-value: 1.61e-19
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 735997424 25 QELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 67
Cdd:smart00201 1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
290-728 |
1.53e-18 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 92.69 E-value: 1.53e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 290 PTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKePAPTTTKEPAPTtPK 369
Cdd:PHA03247 2569 PPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPS-PAANEPDPHPPP-TV 2646
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 370 EPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP--APTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPK 447
Cdd:PHA03247 2647 PPPERPRDDPAPGRVSRPRRARRLGRAAQASSPpqRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPA 2726
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 448 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP-SPTTTKEPAPTTPKE 526
Cdd:PHA03247 2727 AARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASlSESRESLPSPWDPAD 2806
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 527 PAPTTPkKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEE 606
Cdd:PHA03247 2807 PPAAVL-APAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRR 2885
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 607 LAPTTPEEPTPTTPEEPAPttpkaaaPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP-TTPK 685
Cdd:PHA03247 2886 LARPAVSRSTESFALPPDQ-------PERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGePSGA 2958
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 735997424 686 KPAPKELAPTT-TKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT 728
Cdd:PHA03247 2959 VPQPWLGALVPgRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002
|
|
| Somatomedin_B |
pfam01033 |
Somatomedin B domain; |
28-65 |
3.77e-18 |
|
Somatomedin B domain;
Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.77e-18
10 20 30
....*....|....*....|....*....|....*...
gi 735997424 28 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 65
Cdd:pfam01033 2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
363-874 |
2.05e-17 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 88.84 E-value: 2.05e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 363 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKepAPTTPKKPAPT-----TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 437
Cdd:PHA03247 2478 PVYRRPAEARFPFAAGAAPDPGGGGPPDPD--APPAPSRLAPAilpdePVGEPVHPRMLTWIRGLEELASDDAGDPPPPL 2555
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 438 PKEPAPTAPKKPAPttPKEPAPTtPKEPApTTTKEPSPTTPKEPAPtttksaptttkepaptttksaPTTPKEPsptttk 517
Cdd:PHA03247 2556 PPAAPPAAPDRSVP--PPRPAPR-PSEPA-VTSRARRPDAPPQSAR---------------------PRAPVDD------ 2604
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 518 epaPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 597
Cdd:PHA03247 2605 ---RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQ 2681
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 598 KPAPttpeelapttpeeptpttpeepapttpkaaaPNTPKEPAPTTPKEPAPTTPKEPAPTtPKETAPTTPKGTAPTTLK 677
Cdd:PHA03247 2682 RPRR-------------------------------RAARPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPGPAAAR 2729
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 678 EPAPTTPKKPAPKELAPTTTKeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPA 757
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPAT---------PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS 2800
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 758 PKELAPTT----TKGPTSTTSDKPAPTTPKET-----APTTPKEPAPTT------------------PKKPAPTTPETPP 810
Cdd:PHA03247 2801 PWDPADPPaavlAPAAALPPAASPAGPLPPPTsaqptAPPPPPGPPPPSlplggsvapggdvrrrppSRSPAAKPAAPAR 2880
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 811 PTTSEVSTPTTTKEPTTIHKSPDE----STPELSAEPTPKALENSPKEPgVPTTKTPAATKPEMTTTA 874
Cdd:PHA03247 2881 PPVRRLARPAVSRSTESFALPPDQperpPQPQAPPPPQPQPQPPPPPQP-QPPPPPPPRPQPPLAPTT 2947
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
342-669 |
4.87e-17 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 87.69 E-value: 4.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 342 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPT---TPKEPAPTTPKEP 418
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaapAPPAVPAGPATPG 2752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 419 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 498
Cdd:PHA03247 2753 GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPT 2832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 499 TTTKSAPTTPKEPSPTTTKEPAPTTPKEP----APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 574
Cdd:PHA03247 2833 SAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQ 2912
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 575 TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeeLAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPkEPAPTTPKe 654
Cdd:PHA03247 2913 APPPPQPQPQPPPPPQPQPPPPPPPRPQPP--LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVP-QPAPSREA- 2988
|
330
....*....|....*
gi 735997424 655 PAPTTPKETAPTTPK 669
Cdd:PHA03247 2989 PASSTPPLTGHSLSR 3003
|
|
| HX |
smart00120 |
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
1154-1198 |
9.35e-11 |
|
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).
Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.35e-11
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 735997424 1154 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1198
Cdd:smart00120 1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
347-548 |
1.51e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 65.67 E-value: 1.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 347 SAPTTPKE-PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepaptTPKEPTPTTPKE 425
Cdd:PRK12323 372 AGPATAAAaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAP---------EALAAARQASAR 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 426 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPK---EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 502
Cdd:PRK12323 443 GPGGAPAPAPAPAAAPAAAARPAAAGPRPVaaaAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWV 522
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 735997424 503 SAPTtpkePSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP--APTTP 548
Cdd:PRK12323 523 AESI----PDPATADPDDAFETLAPAPAAAPAPRAAAATEPvvAPRPP 566
|
|
| Hemopexin |
pfam00045 |
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
1154-1196 |
1.03e-08 |
|
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).
Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 1.03e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 735997424 1154 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1196
Cdd:pfam00045 1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
339-550 |
1.20e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 59.61 E-value: 1.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 339 EPAPTTTKSAPTTPKEPAPtttKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 418
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPAS---SGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 419 TPTtpkepapttkEPAPTTPKEPAPTAPKkPAPTTPKEPAPTTPKEPAPTTTkePSPTTPKEPAPTTTKSAPTTTKEPAP 498
Cdd:PRK07764 664 DGG----------DGWPAKAGGAAPAAPP-PAPAPAAPAAPAGAAPAQPAPA--PAATPPAGQADDPAAQPPQAAQGASA 730
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 735997424 499 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 550
Cdd:PRK07764 731 PSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
439-1039 |
1.76e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.57 E-value: 1.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 439 KEPAPTAPKKPAPTTPKEPAPTTPKePAPTTTKEPSPTTPKEPAPTTTKS-APTTTKEPAPTTTKSAPTTPKEPSPTTTK 517
Cdd:PHA03247 2471 GELFPGAPVYRRPAEARFPFAAGAA-PDPGGGGPPDPDAPPAPSRLAPAIlPDEPVGEPVHPRMLTWIRGLEELASDDAG 2549
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 518 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPkepaptttkkpaPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 597
Cdd:PHA03247 2550 DPPPPLPPAAPPAAPDRSVPPPRPAPRPSEP------------AVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPL 2617
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 598 KPAPTTPEelapttpeeptpttpeepAPTTPKAAAPNTPKEPAPTtPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlk 677
Cdd:PHA03247 2618 PPDTHAPD------------------PPPPSPSPAANEPDPHPPP-TVPPPERPRDDPAPGRVSRPRRARRLGRAAQ--- 2675
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 678 epAPTTPKKPAPKELaptttkeptsttSDKPAPTTPKGTAPTTPKEPAPTtPKEPAPTTPKGTAPTTLKEPAPTTPKKPA 757
Cdd:PHA03247 2676 --ASSPPQRPRRRAA------------RPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPGPAAARQASPALPAAPA 2740
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 758 PKELAPTTTKgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVStptttkepttihkSPDESTP 837
Cdd:PHA03247 2741 PPAVPAGPAT---------PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASL-------------SESRESL 2798
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 838 ELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAkdktterdlrttpetttaapkmtketatttekTTESKITATTT 917
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQ--------------------------------PTAPPPPPGPP 2846
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 918 QVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPeetakPKDRATNSKATTPKPQKPTKAPKKPTSTKKPK 997
Cdd:PHA03247 2847 PPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARP-----AVSRSTESFALPPDQPERPPQPQAPPPPQPQP 2921
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 735997424 998 TMPRvrKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPN 1039
Cdd:PHA03247 2922 QPPP--PPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ 2961
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
343-528 |
6.02e-08 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 57.36 E-value: 6.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 343 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 422
Cdd:PRK10811 848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAP-VVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTE 926
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 423 PKEPAPTTKEP-APTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT 501
Cdd:PRK10811 927 QPQVITESDVAvAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006
|
170 180
....*....|....*....|....*..
gi 735997424 502 KSAPTTPKEPSPTTTKEPAPTTPKEPA 528
Cdd:PRK10811 1007 PEATVEHNHATAPMTRAPAPEYVPEAP 1033
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
332-409 |
9.71e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.82 E-value: 9.71e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 409
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
391-548 |
1.03e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.41 E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 391 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 470
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 471 KEPSPTTPKEPAPTTTKSAPTTtkEPAPTTTKSAPTtPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 548
Cdd:PRK07994 441 SEPAAASRARPVNSALERLASV--RPAPSALEKAPA-KKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAK 515
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
443-668 |
1.09e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.42 E-value: 1.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 443 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEpSPTTTKEPAPT 522
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASAR-GPGGAPAPAPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 523 TPKEPAPTTPkkPAPTTPKEPAPTTPkepaptttkkpapttpkePAPTTPKETAPTTPKKLTPTTPEKLAPTTPEkPAPT 602
Cdd:PRK12323 454 PAAAPAAAAR--PAAAGPRPVAAAAA------------------AAPARAAPAAAPAPADDDPPPWEELPPEFAS-PAPA 512
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997424 603 TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTtpkePAPTTPKETAPTTP 668
Cdd:PRK12323 513 QPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV----VAPRPPRASASGLP 574
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
260-542 |
1.15e-07 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 56.62 E-value: 1.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 260 KEKTTSAKETQSIEKTSAKDlAPTSKVLAKPTPKAE-TTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 338
Cdd:PTZ00449 532 GEHEDSKESDEPKEGGKPGE-TKEGEVGKKPGPAKEhKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK 610
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 339 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP-APTTPKKPAPTTPKEPAPTTPKE 417
Cdd:PTZ00449 611 SPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKPPKSPKPPfDPKFKEKFYDDYLDAAAKSKETK 690
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 418 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPA--PTTPKEPApTTPKEPAPTTTKEPSPTTPkePAPTTTKSAPTTTKE 495
Cdd:PTZ00449 691 TTVVLDESFESILKETLPETPGTPFTTPRPLPPklPRDEEFPF-EPIGDPDAEQPDDIEFFTP--PEEERTFFHETPADT 767
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 735997424 496 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA--PTTPKE 542
Cdd:PTZ00449 768 PLPDILAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPGdhPSLPKK 816
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
433-798 |
1.23e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 56.53 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 433 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK-EP 511
Cdd:PRK07764 403 AAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAApAP 482
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 512 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPK--------ETAPTTPKKL 583
Cdd:PRK07764 483 APPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLPEATVLGVRgdtlvlgfSTGGLARRFA 562
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 584 TPTTPEKL------------------APTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 645
Cdd:PRK07764 563 SPGNAEVLvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAA 642
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 646 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPttpkEPA 725
Cdd:PRK07764 643 PAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQAD----DPA 718
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997424 726 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTP 798
Cdd:PRK07764 719 AQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAP 791
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
354-532 |
1.58e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 56.01 E-value: 1.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 354 EPAPTTTKEPAPTTPKE-----PAPTTTKEPAPTTTKSAPTTPKEPAPT---TPKKPAPTTPKEPAPTTPKEPTPTTPKE 425
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARvagavPAPGARAAAAVGASAVPAVTAVTGAAGaalAPKAAAAAAATRAEAPPAAPAPPATADR 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 426 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEpsPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 505
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP--PDAAFEPAPRAAAPSAATPAAVPDARAPAAA 516
|
170 180
....*....|....*....|....*...
gi 735997424 506 TTPKEPSPttTKEPAP-TTPKEPAPTTP 532
Cdd:PRK07003 517 SREDAPAA--AAPPAPeARPPTPAAAAP 542
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
630-841 |
1.83e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.65 E-value: 1.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 630 AAAPNTPKEPA--PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDK 707
Cdd:PRK12323 378 AAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAA 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 708 PAPTTPKGTAPttPKEPAPTTPKEPAPTTPkgtAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAP 787
Cdd:PRK12323 458 PAAAARPAAAG--PRPVAAAAAAAPARAAP---AAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATA 532
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 735997424 788 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA 841
Cdd:PRK12323 533 DPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPALAA 586
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
332-664 |
2.41e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.38 E-value: 2.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTtkEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 411
Cdd:PRK07764 400 SAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS--PAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPT 477
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 412 PTTPKEPTPTTPKEPAPttKEPAPTTPKEPAPTAP-----------------------KKPAPT---------------- 452
Cdd:PRK07764 478 AAPAPAPPAAPAPAAAP--AAPAAPAAPAGADDAAtlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstg 555
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 453 -----------------------------------TPKEPAPTTPKEPAPTT--TKEPSPTTPKEPAPTTTKSAPTTTKE 495
Cdd:PRK07764 556 glarrfaspgnaevlvtalaeelggdwqveavvgpAPGAAGGEGPPAPASSGppEEAARPAAPAAPAAPAAPAPAGAAAA 635
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 496 PAPTTTKSAPTTPkePSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 575
Cdd:PRK07764 636 PAEASAAPAPGVA--APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ 713
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 576 APTTPKKLTPTTPEKLAPTTPEKPAPTTPEElAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 655
Cdd:PRK07764 714 ADDPAAQPPQAAQGASAPSPAADDPVPLPPE-PDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPS 792
|
....*....
gi 735997424 656 APTTPKETA 664
Cdd:PRK07764 793 MDDEDRRDA 801
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
340-546 |
2.91e-07 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 55.48 E-value: 2.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 340 PAPTTTKSAPTTPKEPA---PTTTKEPAPTtPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepAPTTPK 416
Cdd:PRK10263 336 PVEPVTQTPPVASVDVPpaqPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQ---PYYAPA 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 417 EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKE-PSPTTPKEPAPTTTKSAPTTTKE 495
Cdd:PRK10263 412 AEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTyQQPAAQEPLYQQPQPVEQQPVVE 491
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997424 496 PAPTTTKSAPTTPK----------------------EPSPTTTKEPAPTTPKEPAPTTPKKPapttPKEPAPT 546
Cdd:PRK10263 492 PEPVVEETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
340-467 |
3.48e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 54.72 E-value: 3.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 340 PAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 419
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 735997424 420 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkEPAP 467
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARL-TPTE 492
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
432-842 |
4.36e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.61 E-value: 4.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 432 EPAPTTPKEPAPTAPKKPAPTtPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPtttKSAPTTPKEP 511
Cdd:PRK07764 391 AGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSP---PPAAAPSAQP 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 512 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEK- 590
Cdd:PRK07764 467 APAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLPEATVLGVRGd 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 591 ---LAPTTPEKP----APTTPEELAPTTPEEPTPT-TPEEPAPTTPKAAAPNTPKEPAPTTP----KEPAPTTPKEPAPT 658
Cdd:PRK07764 547 tlvLGFSTGGLArrfaSPGNAEVLVTALAEELGGDwQVEAVVGPAPGAAGGEGPPAPASSGPpeeaARPAAPAAPAAPAA 626
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 659 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGT-APTTPKEPAPTTPKEPAPTTP 737
Cdd:PRK07764 627 PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPApAPAAPAAPAGAAPAQPAPAPA 706
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 738 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVS 817
Cdd:PRK07764 707 ATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMA 786
|
410 420
....*....|....*....|....*
gi 735997424 818 TPTTTKEPTTIHKSPDESTPELSAE 842
Cdd:PRK07764 787 EDDAPSMDDEDRRDAEEVAMELLEE 811
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
434-542 |
4.45e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 54.43 E-value: 4.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 434 APTTPKEPAPTAPKKPAPTTPKePAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkEPAPTTTKSAPttPKEPSP 513
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVR----------------ETATPPPVPPR--PVAPPV 421
|
90 100 110
....*....|....*....|....*....|.
gi 735997424 514 TTTKEPAPTTPKE--PAPTTPKKPAPTTPKE 542
Cdd:PRK14950 422 PHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
332-741 |
4.57e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 54.79 E-value: 4.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPkepa 411
Cdd:PHA03307 61 ACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP-----PPTPPPASPPPSPA---- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 412 ptTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTApkkPAPTTPKEPAPTTPKEPAPtttkEPSPTTPKEPAptttksapt 491
Cdd:PHA03307 132 --PDLSEMLRPVGSPGPPPAASPPAAGASPAAVA---SDAASSRQAALPLSSPEET----ARAPSSPPAEP--------- 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 492 tTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTtpkePAPTT 571
Cdd:PHA03307 194 -PPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPI----TLPTR 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 572 PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAA---APNTPKEPAPTTPKEPA 648
Cdd:PHA03307 269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSStssSSESSRGAAVSPGPSPS 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 649 PTtpkePAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKepAPTT 728
Cdd:PHA03307 349 RS----PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLD--AGAA 422
|
410
....*....|...
gi 735997424 729 PKEPAPTTPKGTA 741
Cdd:PHA03307 423 SGAFYARYPLLTP 435
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
433-536 |
5.13e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 5.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 433 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKEPS 512
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAP-----------------PKPAAAAAAAAAPAAPP 100
|
90 100
....*....|....*....|....
gi 735997424 513 PTTTKEPAPTTPKEPAPTTPKKPA 536
Cdd:PRK12270 101 AAAAAAAPAAAAVEDEVTPLRGAA 124
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
356-734 |
5.78e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.22 E-value: 5.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 356 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 435
Cdd:PRK07764 389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAP 468
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 436 TTPKEPAPTAPKKPAPTTPKEPAPTtPKEPAPTTTKEPSPTTP------------------KEPAPTTTKSAPTTTKEPA 497
Cdd:PRK07764 469 APAAAPEPTAAPAPAPPAAPAPAAA-PAAPAAPAAPAGADDAAtlrerwpeilaavpkrsrKTWAILLPEATVLGVRGDT 547
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 498 PTTTKSAP----------------------------------TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPkeP 543
Cdd:PRK07764 548 LVLGFSTGglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAP--A 625
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 544 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeep 623
Cdd:PRK07764 626 APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPA----------------- 688
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 624 aptTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTkeptst 703
Cdd:PRK07764 689 ---APAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPP------ 759
|
410 420 430
....*....|....*....|....*....|.
gi 735997424 704 tsdkPAPTTPKGTAPTTPKEPAPTTPKEPAP 734
Cdd:PRK07764 760 ----PPPAPAPAAAPAAAPPPSPPSEEEEMA 786
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
332-409 |
6.50e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 6.50e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtttksAPTTPKEPAPTTPKKPAPTTPKE 409
Cdd:PRK12270 45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAA-----APAAPPAAAAAAAPAAAAVEDEV 117
|
|
| Streccoc_I_II |
NF033804 |
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ... |
708-865 |
8.34e-07 |
|
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.
Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 53.79 E-value: 8.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 708 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAP--TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 785
Cdd:NF033804 825 PKITKEKPTPPVAPTAPQAPTYEVEKPLEPAPVAPTYENEPTPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPTYENEP 904
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 786 AP--TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPttiHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTP 863
Cdd:NF033804 905 TPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPP---VKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTP 981
|
..
gi 735997424 864 AA 865
Cdd:NF033804 982 PA 983
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
707-799 |
8.45e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 8.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 707 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkgptstTSDKPAPTTPKETA 786
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-------------AAAAAAPAAPPAAA 103
|
90
....*....|...
gi 735997424 787 PTTPKEPAPTTPK 799
Cdd:PRK12270 104 AAAAPAAAAVEDE 116
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
318-532 |
8.54e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 53.73 E-value: 8.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 318 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkEPAPTTTKSAPTTPKEPAPT 397
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAL-AAARQASARGPGGAPAPAPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 398 TPKKPAPTTPkepaPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPtTPKEPAPTTTKEPSPTT 477
Cdd:PRK12323 454 PAAAPAAAAR----PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP-AQPDAAPAGWVAESIPD 528
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 735997424 478 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKepsptttkePAPTTPKEPAPTTP 532
Cdd:PRK12323 529 PATADPDDAFETLAPAPAAAPAPRAAAATEPV---------VAPRPPRASASGLP 574
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
334-467 |
9.15e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 53.18 E-value: 9.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 334 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPT 413
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAA---PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 735997424 414 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPkKPAPTTPKEPAPTTPKEPAP 467
Cdd:PRK14951 443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVASA-APAPAAAPAAARLTPTEEGD 495
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
373-482 |
9.28e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 9.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 373 PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkEPAPTTPKEPAPTAPKKPAPT 452
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPA-----------------------PPAAAAPAAPPKPAAAAAAAA 94
|
90 100 110
....*....|....*....|....*....|
gi 735997424 453 TPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 482
Cdd:PRK12270 95 APAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
280-689 |
1.07e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.64 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 280 LAPTSKVLAKPTPKAettTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPtt 359
Cdd:PHA03307 43 LVSDSAELAAVTVVA---GAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP-- 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 360 tkePAPTTPKEPAPTttkePAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPK 439
Cdd:PHA03307 118 ---PPTPPPASPPPS----PAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPP 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 440 EPAP--TAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 517
Cdd:PHA03307 191 AEPPpsTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIW 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 518 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEpaptttkkpapttPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 597
Cdd:PHA03307 271 EASGWNGPSSRPGPASSSSSPRERSPSPSPSSP-------------GSGPAPSSPRASSSSSSSRESSSSSTSSSSESSR 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 598 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLK 677
Cdd:PHA03307 338 GAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPL 417
|
410
....*....|..
gi 735997424 678 EPAPTTPKKPAP 689
Cdd:PHA03307 418 DAGAASGAFYAR 429
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
337-515 |
1.69e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 52.56 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 337 PKEPAPtttksAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepaptTPK 416
Cdd:PRK07994 361 PAAPLP-----EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLL---------AAR 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 417 EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPtttKEPSPTTPKEPAptttksAPTTTKEP 496
Cdd:PRK07994 427 QQLQRAQGATKAKKSEPAAASRARPVNSALERLASVRP--APSALEKAPAK---KEAYRWKATNPV------EVKKEPVA 495
|
170
....*....|....*....
gi 735997424 497 APTTTKSAPTTPKEPSPTT 515
Cdd:PRK07994 496 TPKALKKALEHEKTPELAA 514
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
629-691 |
1.72e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.72e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997424 629 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 691
Cdd:PRK12270 52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
370-548 |
2.17e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.16 E-value: 2.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 370 EPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 449
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 450 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP----K 525
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPaaasR 518
|
170 180
....*....|....*....|....
gi 735997424 526 EPAPTTPKKPAP-TTPKEPAPTTP 548
Cdd:PRK07003 519 EDAPAAAAPPAPeARPPTPAAAAP 542
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
655-746 |
2.39e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 2.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 655 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 734
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
90
....*....|..
gi 735997424 735 TTPKGTAPTTLK 746
Cdd:PRK12270 118 TPLRGAAAAVAK 129
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
437-731 |
2.51e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 52.00 E-value: 2.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 437 TPKEPAPTAPKKPAPTTpKEPAPTTPKEPA--PTTTKEPSptTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 514
Cdd:PTZ00449 542 EPKEGGKPGETKEGEVG-KKPGPAKEHKPSkiPTLSKKPE--FPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELL 618
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 515 TTkepaPTTPKEP-APTTPKKPAPTTpkepAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKetapttpkkltptTPEKLAP 593
Cdd:PTZ00449 619 DI----PKSPKRPeSPKSPKRPPPPQ----RPSSPERPEGPKIIKSPKPPKSPKPPFDPK-------------FKEKFYD 677
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 594 TTPEKPAPTtpEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP--TTPKEPAPTTPKETAPTTPKGT 671
Cdd:PTZ00449 678 DYLDAAAKS--KETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFpfEPIGDPDAEQPDDIEFFTPPEE 755
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997424 672 APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA--PTTPKGTAPTTPKEpAPTTPKE 731
Cdd:PTZ00449 756 ERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMkrPDSPSEHEDKPPGD-HPSLPKK 816
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
433-607 |
2.74e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.80 E-value: 2.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 433 PAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPS 512
Cdd:PRK12323 385 PAPAAAAPAAAAPAPAAPPAAP--AAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAA 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 513 PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA 592
Cdd:PRK12323 463 RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLA 542
|
170
....*....|....*
gi 735997424 593 PTTPEKPAPTTPEEL 607
Cdd:PRK12323 543 PAPAAAPAPRAAAAT 557
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
458-550 |
2.80e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 51.73 E-value: 2.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 458 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTttkEPAPTTPKEPAPTTPKK--P 535
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPV---APPVPHTPESAPKLTRAaiP 437
|
90
....*....|....*
gi 735997424 536 APTTPKEPAPTTPKE 550
Cdd:PRK14950 438 VDEKPKYTPPAPPKE 452
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
472-550 |
2.93e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 2.93e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997424 472 EPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 550
Cdd:PRK12270 39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
433-548 |
3.41e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 3.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 433 PAPTTPKEPAPTAP-KKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 511
Cdd:PRK14951 376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455
|
90 100 110
....*....|....*....|....*....|....*..
gi 735997424 512 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 548
Cdd:PRK14951 456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
333-711 |
3.56e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 51.69 E-value: 3.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 333 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT--TPKEPAPTTPKKPA--PTTPK 408
Cdd:pfam03154 180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPLQPMtqPPPPS 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 409 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKS 488
Cdd:pfam03154 260 QVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 489 APTTTKEPAPTTTKSAPTTPKEPSPTTtkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTttkkpapttpkepa 568
Cdd:pfam03154 340 PREQPLPPAPLSMPHIKPPPTTPIPQL---PNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSL-------------- 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 569 pTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPA 648
Cdd:pfam03154 403 -STHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGP 481
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997424 649 PTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 711
Cdd:pfam03154 482 PTSTSSAMPGIqPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPT 545
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
647-749 |
3.65e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.81 E-value: 3.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 647 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkeptstTSDKPAPTTPKGTAPTTPKEPAP 726
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPA-------------APPKPAAAAAAAAAPAAPPAAAA 104
|
90 100
....*....|....*....|...
gi 735997424 727 TTPKEPAPTTPKgtaPTTLKEPA 749
Cdd:PRK12270 105 AAAPAAAAVEDE---VTPLRGAA 124
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
333-409 |
3.71e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 51.35 E-value: 3.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 333 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP-----TTPKEPAPTTTKEPAPTTTKSAPTTPKE--PAPTTPKKPAPT 405
Cdd:PRK14950 369 AKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEpvretATPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPA 448
|
....
gi 735997424 406 TPKE 409
Cdd:PRK14950 449 PPKE 452
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
630-747 |
3.84e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 3.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 630 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTtpkgTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 709
Cdd:PRK14951 378 KKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAP----AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 735997424 710 PTTPKGTAP--TTPKEPAPTTPKEPAPTTPKGTAPTTLKE 747
Cdd:PRK14951 454 QAAPETVAIpvRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
318-548 |
4.14e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.39 E-value: 4.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 318 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTttkSAPTTPKEPAPT 397
Cdd:PRK07003 393 ASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARA---SADSRCDERDAQ 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 398 TPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPApTAPKKPAPTTPKEPAPTTPkEPAPTTTKEPSPTT 477
Cdd:PRK07003 470 PPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPA-AASREDAPAAAAPPAPEAR-PPTPAAAAPAARAG 547
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997424 478 PKEPA----PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT-TPKEPAPTTPKKPAPTTPKEPAPTTP 548
Cdd:PRK07003 548 GAAAAldvlRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVpTPRARAATGDAPPNGAARAEQAAESR 623
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
372-468 |
4.25e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.43 E-value: 4.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 372 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPApttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAP 451
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAA---------------------AAPAAPPKPAAAAAAAAAP 96
|
90
....*....|....*..
gi 735997424 452 TTPKEPAPTTPKEPAPT 468
Cdd:PRK12270 97 AAPPAAAAAAAPAAAAV 113
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
332-475 |
5.20e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 51.02 E-value: 5.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP--KEPAPTTPKKPAPTTPKE 409
Cdd:PRK07994 369 EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKKSEPAAASR 448
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997424 410 PAPTTPKEPTPTTPKEPAPTTkePAPTTPKEPAPTAPKKPAPTtpKEPAPTTPKEPAPTTTKEPSP 475
Cdd:PRK07994 449 ARPVNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
545-744 |
5.90e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 50.64 E-value: 5.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 545 PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 624
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 625 PTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPtTPKKPAPKELAPTTTKEPTSTT 704
Cdd:PRK12323 455 AAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP-AQPDAAPAGWVAESIPDPATAD 533
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 735997424 705 SDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 744
Cdd:PRK12323 534 PDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGL 573
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
332-456 |
7.22e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.58 E-value: 7.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKePAPTTtkepAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepa 411
Cdd:PRK14950 345 SYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPT-PAPST----RPKAAAAANIPPKEPVRETATPPPVPPR---- 415
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 735997424 412 pttpkeptptTPKEPAPTTKEPAPTTPKE--PAPTAPKKPAPTTPKE 456
Cdd:PRK14950 416 ----------PVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
357-471 |
8.14e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.66 E-value: 8.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 357 PTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkEPAPT 436
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-----------------------AAAAA 94
|
90 100 110
....*....|....*....|....*....|....*
gi 735997424 437 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTK 471
Cdd:PRK12270 95 APAAPPAAAAAAAPAAAAVEDEVTPLRGAAAAVAK 129
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
434-597 |
9.77e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 49.86 E-value: 9.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 434 APTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTttkEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPsp 513
Cdd:PRK07994 367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPP---PPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKS-- 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 514 tttkEPAPTTPKEPAPTTPKKPAPTTP-KEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA 592
Cdd:PRK07994 442 ----EPAAASRARPVNSALERLASVRPaPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLA 517
|
....*
gi 735997424 593 PTTPE 597
Cdd:PRK07994 518 AEAIE 522
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
496-575 |
9.89e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.27 E-value: 9.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 496 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 575
Cdd:PRK12270 39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
338-546 |
1.19e-05 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 50.05 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 338 KEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepapttPKE 417
Cdd:COG5665 276 TNQLTTSNTPTSTAKAQPQPPTKKQPAKEPPSDTASG---NPSAPSVLINSDSPTSEDPATASVPTT----------EET 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 418 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 497
Cdd:COG5665 343 TAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVDKKVSPDSATSSTKSEKEGGTASSPMPPNIAIGAKDDVDATDPS 422
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 735997424 498 PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPT 546
Cdd:COG5665 423 QEAKEYTKNAPMTPEADSAPESSVRTEASPSAGSDLEPENTTLRDPAPN 471
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
343-409 |
1.54e-05 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 48.74 E-value: 1.54e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 343 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT-PKKPAPTTPKE 409
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVPSS 142
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
630-691 |
1.83e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.50 E-value: 1.83e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997424 630 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 691
Cdd:PRK12270 45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA 106
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
632-738 |
1.83e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 1.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 632 APNTPKEPAPTTPKEPAPTTPKePAPTTPKETAPTTPkgtAPTTLKEPAPTTPKKPAPKELAptttkeptsttsdkPAPT 711
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAAN---IPPKEPVRETATPPPVPPRPVA--------------PPVP 422
|
90 100
....*....|....*....|....*....
gi 735997424 712 TPKGTAPTTPKE--PAPTTPKEPAPTTPK 738
Cdd:PRK14950 423 HTPESAPKLTRAaiPVDEKPKYTPPAPPK 451
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
364-480 |
2.07e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 364 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkEPAPTTPKEPAP 443
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVR------------------------ETATPPPVPPRP 416
|
90 100 110
....*....|....*....|....*....|....*....
gi 735997424 444 TAPKKPaptTPKEPAPTTPKE--PAPTTTKEPSPTTPKE 480
Cdd:PRK14950 417 VAPPVP---HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
474-550 |
2.30e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.12 E-value: 2.30e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997424 474 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPtttkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 550
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAA-----AAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
276-469 |
2.73e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 48.72 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 276 SAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKeP 355
Cdd:PRK12323 378 AAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPA-A 456
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 356 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT-TPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPA 434
Cdd:PRK12323 457 APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPApADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDD 536
|
170 180 190
....*....|....*....|....*....|....*..
gi 735997424 435 PTTPKEPAPTAPKKPAPTTPKEP--APTTPKEPAPTT 469
Cdd:PRK12323 537 AFETLAPAPAAAPAPRAAAATEPvvAPRPPRASASGL 573
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
270-481 |
2.77e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.83 E-value: 2.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 270 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTtikSAPTTPKEPAPTTTKSAP 349
Cdd:PRK07764 572 TALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA---GAAAAPAEASAAPAPGVA 648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 350 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 429
Cdd:PRK07764 649 APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA 728
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 735997424 430 TKEPAPTTPKEPAPTAPKKP--APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 481
Cdd:PRK07764 729 SAPSPAADDPVPLPPEPDDPpdPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
664-760 |
2.84e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.73 E-value: 2.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 664 APTTPKGTAPTTLKEPAPTTPKKPapkelaptttkeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPT 743
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAA--------------------PAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPA 97
|
90
....*....|....*..
gi 735997424 744 TLKEPAPTTPKKPAPKE 760
Cdd:PRK12270 98 APPAAAAAAAPAAAAVE 114
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
332-679 |
2.87e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 48.42 E-value: 2.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPaptttkepaPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 411
Cdd:pfam17823 98 SEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAAL---------PSEAFSAPRAAACRANASAAPRAAIAAASAP 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 412 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 491
Cdd:pfam17823 169 HAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTV 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 492 TTKEPApTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTtpkkPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEpapTT 571
Cdd:pfam17823 249 TPAALA-TLAAAAGTVASAAGTINMGDPHARRLSPAKHM----PSDTMARNPAAPMGAQAQGPIIQVSTDQPVHN---TA 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 572 PKETAPTTPKKLTPTTPEKLAPTTpekPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 651
Cdd:pfam17823 321 GEPTPSPSNTTLEPNTPKSVASTN---LAVVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGI 397
|
330 340
....*....|....*....|....*...
gi 735997424 652 PKEPAPTTPKETAPTTPKGTAPTTLKEP 679
Cdd:pfam17823 398 LLAPEQVATEATAGTASAGPTPRSSGDP 425
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
640-747 |
2.93e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 48.27 E-value: 2.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 640 APTTPKEPAPTTPKEPAPTTPKeTAPTTPKGTAPTTLKEPAPTTPKkPAPKElaptttkeptsttsdkPAPTTPKGTAPT 719
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRE-TATPP----------------PVPPRPVAPPVP 422
|
90 100 110
....*....|....*....|....*....|
gi 735997424 720 TPKEPAPTTPKE--PAPTTPKGTAPTTLKE 747
Cdd:PRK14950 423 HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
331-403 |
3.57e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.35 E-value: 3.57e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997424 331 KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPA 403
Cdd:PRK12270 52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
630-759 |
3.70e-05 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 47.45 E-value: 3.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 630 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 709
Cdd:NF040712 200 ATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGE 279
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 735997424 710 PTTPKGTAPTTPKEPAPTTPKEPA-PTTPKGTAPTTLKEPAPTTPKKPAPK 759
Cdd:NF040712 280 PPAPGAAETPEAAEPPAPAPAAPAaPAAPEAEEPARPEPPPAPKPKRRRRR 330
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
707-802 |
4.02e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.35 E-value: 4.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 707 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkgptsttsdKPAPTTPKETA 786
Cdd:PRK12270 45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPA----------------APPAAAAAAAP 108
|
90
....*....|....*.
gi 735997424 787 PTTPKEPAPTTPKKPA 802
Cdd:PRK12270 109 AAAAVEDEVTPLRGAA 124
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
432-605 |
5.57e-05 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 47.73 E-value: 5.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 432 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTpkEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 511
Cdd:PRK10811 859 REAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDV 936
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 512 S--PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPaPTTPKETAPTTPKKLTPTTPE 589
Cdd:PRK10811 937 AvaQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETV-TAVEPEVAPAQVPEATVEHNH 1015
|
170
....*....|....*..
gi 735997424 590 KLAPTTpEKPAPT-TPE 605
Cdd:PRK10811 1016 ATAPMT-RAPAPEyVPE 1031
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
503-733 |
5.67e-05 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 47.73 E-value: 5.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 503 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTpkEPAPTTTKKPAPTTPKEPAPTTPKETApttpkk 582
Cdd:PRK10811 844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETT------ 915
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 583 ltptTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeepapttpKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKE 662
Cdd:PRK10811 916 ----HPEVIAAPVTEQPQVITESD----------------------VAVAQEVAEHAEPVVEPQDETADIEEAAETAEVV 969
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997424 663 TAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPApttpkgTAPTTpKEPAPTTPKEPA 733
Cdd:PRK10811 970 VAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHA------TAPMT-RAPAPEYVPEAP 1033
|
|
| HX |
smart00120 |
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
1110-1152 |
5.80e-05 |
|
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).
Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 41.84 E-value: 5.80e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 735997424 1110 VDGLTTLRNGTLVAFRGHYFWMLSPFSP-PSPARRITEVW-GIPS 1152
Cdd:smart00120 1 IDAAFELRDGKTYFFKGDKYWRFDPKRVdPGYPKLISSFFpGLPC 45
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
347-409 |
5.95e-05 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 47.69 E-value: 5.95e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997424 347 SAPTTPKEPAPtttkePAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 409
Cdd:COG5373 42 EAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAA 99
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
459-648 |
7.12e-05 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 47.34 E-value: 7.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 459 PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPspTTTKEPAPTTPKEPAPTTPKKPAPT 538
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEP--VVVAEPQPEEVVVVETTHPEVIAAP 923
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 539 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTP 617
Cdd:PRK10811 924 VTEQPQVITESDVAVAQEVAEHAEPVVEPQDeTADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAP 1003
|
170 180 190
....*....|....*....|....*....|.
gi 735997424 618 TTPEEPAPTTPKAAAPNTpKEPAPTTPKEPA 648
Cdd:PRK10811 1004 AQVPEATVEHNHATAPMT-RAPAPEYVPEAP 1033
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
432-604 |
7.44e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.18 E-value: 7.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 432 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSpttPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 511
Cdd:PRK12323 393 AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAA---ARQASARGPGGAPAPAPAPAAAPAAAARPAAAGP 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 512 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPaptTPKETAPTTPKKLTPTTPEKL 591
Cdd:PRK12323 470 RPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAES---IPDPATADPDDAFETLAPAPA 546
|
170
....*....|...
gi 735997424 592 APTTPEKPAPTTP 604
Cdd:PRK12323 547 AAPAPRAAAATEP 559
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
332-409 |
7.56e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 47.26 E-value: 7.56e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 409
Cdd:PRK14948 516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
598-762 |
8.15e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 47.17 E-value: 8.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 598 KPAPTTPEelAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTP----KGTAP 673
Cdd:PRK07994 360 HPAAPLPE--PEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqraQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 674 TTLKEPAPTTPKKPAPKELAptttKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTP 753
Cdd:PRK07994 438 AKKSEPAAASRARPVNSALE----RLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELA 513
|
....*....
gi 735997424 754 KKPAPKELA 762
Cdd:PRK07994 514 AKLAAEAIE 522
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
503-871 |
8.97e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.09 E-value: 8.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 503 SAPTTPKEPSPTTTKEPAPTTPKEPAPTT------PKKPAPTT--PKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 574
Cdd:PHA03307 23 RPPATPGDAADDLLSGSQGQLVSDSAELAavtvvaGAAACDRFepPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAR 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 575 TAPTTPKKLTPTTPEKlAPTTPEKPAPTTPEELapTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 654
Cdd:PHA03307 103 EGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDL--SEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSP 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 655 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPApkelaptttkeptSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 734
Cdd:PHA03307 180 EETARAPSSPPAEPPPSTPPAAASPRPPRRSSPI-------------SASASSPAPAPGRSAADDAGASSSDSSSSESSG 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 735 TTPKGTAPTTLKEPAP-TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTT 813
Cdd:PHA03307 247 CGWGPENECPLPRPAPiTLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSS 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 814 SEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPK--EPGVPTTKTPAATKPEMT 871
Cdd:PHA03307 327 SSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRkrPRPSRAPSSPAASAGRPT 386
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
300-510 |
9.05e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.79 E-value: 9.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 300 GPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP 379
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 380 APTttkSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAP 459
Cdd:PRK12323 453 APA---AAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDP 529
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 735997424 460 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 510
Cdd:PRK12323 530 ATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGD 580
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
448-543 |
9.36e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 9.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 448 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 527
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAP-----------------AAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAP 99
|
90
....*....|....*.
gi 735997424 528 APTTPKKPAPTTPKEP 543
Cdd:PRK12270 100 PAAAAAAAPAAAAVED 115
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
214-521 |
9.40e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.24 E-value: 9.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 214 AKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPK 293
Cdd:PHA03247 2734 ALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA 2813
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 294 AETTTKGPALTTPKEPTPTTPKEPASttpkeptpttiksaPTTPKEPAPTTTKSAPTTPKepAPTTTKEPAPTTPKEPAp 373
Cdd:PHA03247 2814 PAAALPPAASPAGPLPPPTSAQPTAP--------------PPPPGPPPPSLPLGGSVAPG--GDVRRRPPSRSPAAKPA- 2876
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 374 TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTT 453
Cdd:PHA03247 2877 APARPPVRRLARPAVSRSTESFALPPDQPERPPQ-------------------------PQAPPPPQPQPQPPPPPQPQP 2931
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997424 454 PKEPAPTTPKEPAPTTTKEPSP-TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT--TPKEPSPTTTKEPAP 521
Cdd:PHA03247 2932 PPPPPPRPQPPLAPTTDPAGAGePSGAVPQPWLGALVPGRVAVPRFRVPQPAPSreAPASSTPPLTGHSLS 3002
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
502-576 |
9.77e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 9.77e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997424 502 KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETA 576
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA 111
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
519-693 |
1.18e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.40 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 519 PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 598
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 599 PAPTTPEElapttpeePTPTTPEEPAPTTPKAAAPNTPKEPApttPKEPAPTTPKEPAPTtpKETAPTTPKGTAPTTLKE 678
Cdd:PRK07994 441 SEPAAASR--------ARPVNSALERLASVRPAPSALEKAPA---KKEAYRWKATNPVEV--KKEPVATPKALKKALEHE 507
|
170
....*....|....*
gi 735997424 679 PAPTTPKKPAPKELA 693
Cdd:PRK07994 508 KTPELAAKLAAEAIE 522
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
363-537 |
1.33e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.40 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 363 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepaPTTKEPAPTTPKEPA 442
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPAS--------------------APQQAPAVPLPETTS 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 443 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT-----TPKEPAPTTtkSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 517
Cdd:PRK07994 421 QLLAARQQLQRAQGATKAKKSEPAAASRARPVNSalerlASVRPAPSA--LEKAPAKKEAYRWKATNPVEVKKEPVATPK 498
|
170 180
....*....|....*....|
gi 735997424 518 EPAPTTPKEPAPTTPKKPAP 537
Cdd:PRK07994 499 ALKKALEHEKTPELAAKLAA 518
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
351-447 |
1.35e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 351 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepaPTT 430
Cdd:PRK12270 39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAP-------------------AAP 99
|
90
....*....|....*..
gi 735997424 431 KEPAPTTPKEPAPTAPK 447
Cdd:PRK12270 100 PAAAAAAAPAAAAVEDE 116
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
335-399 |
1.45e-04 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 45.66 E-value: 1.45e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997424 335 TTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT-PKEPAPTTP 399
Cdd:TIGR00601 75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVP 140
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
443-688 |
1.47e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.62 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 443 PTAPKKPAPTTPKEPAPTT--------PKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 514
Cdd:PRK10263 339 PVTQTPPVASVDVPPAQPTvawqpvpgPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQ 418
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 515 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA-P 593
Cdd:PRK10263 419 PYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVeE 498
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 594 TTPEKPAPTTPEELAPTTPEEPTPTTPEEPApttpkaaAPNTPKEPAPTTPKEPAPTTPKEPaPTTPKETAPTTPKGTAP 673
Cdd:PRK10263 499 TKPARPPLYYFEEVEEKRAREREQLAAWYQP-------IPEPVKEPEPIKSSLKAPSVAAVP-PVEAAAAVSPLASGVKK 570
|
250
....*....|....*
gi 735997424 674 TTLKEPAPTTPKKPA 688
Cdd:PRK10263 571 ATLATGAAATVAAPV 585
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
386-513 |
1.50e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.25 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 386 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 465
Cdd:PRK14951 368 AAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVAL 447
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 735997424 466 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSP 513
Cdd:PRK14951 448 APAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
434-831 |
1.51e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.32 E-value: 1.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 434 APTTPKEPAPTAPKKPAPTTPKEPAPTTpkEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT-KSAPTTPKEPS 512
Cdd:PHA03307 24 PPATPGDAADDLLSGSQGQLVSDSAELA--AVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTwSLSTLAPASPA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 513 PTTTKEPAPTTPKEPAPTTPKKPAPttPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKkltpttpekla 592
Cdd:PHA03307 102 REGSPTPPGPSSPDPPPPTPPPASP--PPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAS----------- 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 593 PTTPEKPAPTTPEElapttpeeptpttpeepapttpkAAAPNTPKEPAPTTPkEPAPTTPKEPAPTTPKETAPTTPKGTA 672
Cdd:PHA03307 169 SRQAALPLSSPEET-----------------------ARAPSSPPAEPPPST-PPAAASPRPPRRSSPISASASSPAPAP 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 673 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPttpkGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPtT 752
Cdd:PHA03307 225 GRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAP----ITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSP-S 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 753 PKKPAPKELAPTTTK-----GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTT 827
Cdd:PHA03307 300 PSSPGSGPAPSSPRAsssssSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPA 379
|
....
gi 735997424 828 IHKS 831
Cdd:PHA03307 380 ASAG 383
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
431-548 |
1.60e-04 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 43.12 E-value: 1.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 431 KEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPaptttksaptttkepaptttksAPTTPKE 510
Cdd:pfam02389 28 KVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVP----------------------EPCSPKV 85
|
90 100 110
....*....|....*....|....*....|....*...
gi 735997424 511 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 548
Cdd:pfam02389 86 PEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
457-751 |
1.83e-04 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 45.76 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 457 PAPTTPKEPAPTTTKEPSPTTPKEPAPtttksaptttkEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP- 535
Cdd:PHA03369 354 TAPSRVLAAAAKVAVIAAPQTHTGPAD-----------RQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPq 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 536 APTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE------KLAPTTPEKPAPTTPEELAP 609
Cdd:PHA03369 423 SPGTSYGPEPVGPVPPQPTNPYVMPISMANMVYPGHPQEHGHERKRKRGGELKEelietlKLVKKLKEEQESLAKELEAT 502
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 610 TTPEEPTPTTPEEPAPTTPKAAAPNTpkEPAPTTPkEPAPTTpKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKP-- 687
Cdd:PHA03369 503 AHKSEIKKIAESEFKNAGAKTAAANI--EPNCSAD-AAAPAT-KRARPETKTELEAVVRFPYQIRNMESPAFVHSFTStt 578
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997424 688 ----------APKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPT-TPKEPAPTTPKGTAPTTLKEPAPT 751
Cdd:PHA03369 579 laaaagqgsdTAEALAGAIETLLTQASAQPAGLSLPAPAVPVNASTPASTpPPLAPQEPPQPGTSAPSLETSLPQ 653
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
281-537 |
1.87e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 46.00 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 281 APTSKVLAKPTPKAETttkgPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPA-PTT 359
Cdd:PRK07003 401 AVTGAAGAALAPKAAA----AAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPAdSGS 476
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 360 TKEPAPTTPkepaPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTtpkepapttpkeptpttpkepaptTKEPAPttPK 439
Cdd:PRK07003 477 ASAPASDAP----PDAAFEPAPRAAAPSAATPAAVPDARAPAAASR------------------------EDAPAA--AA 526
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 440 EPAPTAPkKPAPTTPKEPAPTTPKEPA-----PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 514
Cdd:PRK07003 527 PPAPEAR-PPTPAAAAPAARAGGAAAAldvlrNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAAT 605
|
250 260
....*....|....*....|...
gi 735997424 515 TTKEPAPTTPKEPAPTTPKKPAP 537
Cdd:PRK07003 606 GDAPPNGAARAEQAAESRGAPPP 628
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
333-520 |
1.90e-04 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 46.19 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 333 APTTPKEPAPTTTKSAPTTpkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTpKEPAPTTPkkpapttpkepap 412
Cdd:PRK10811 870 VAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVT-EQPQVITE------------- 933
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 413 ttpkeptpTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA-PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 491
Cdd:PRK10811 934 --------SDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAePEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005
|
170 180
....*....|....*....|....*....
gi 735997424 492 TTKEPAPTTTKSAPTTpKEPSPTTTKEPA 520
Cdd:PRK10811 1006 VPEATVEHNHATAPMT-RAPAPEYVPEAP 1033
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
458-851 |
2.22e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.75 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 458 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPttPKEPAPTTPKKPAP 537
Cdd:PRK07764 385 LGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNA--PAGGAPSPPPAAAP 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 538 TTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEK---LAPTTPEKPAPTTPEELAPTTPEE 614
Cdd:PRK07764 463 SAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERwpeILAAVPKRSRKTWAILLPEATVLG 542
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 615 PTPTTPEEPAPTTPKAAAPNTPKEP--------------------APTTPKEPAPTTPKEPAPTTPKET--APTTPKGTA 672
Cdd:PRK07764 543 VRGDTLVLGFSTGGLARRFASPGNAevlvtalaeelggdwqveavVGPAPGAAGGEGPPAPASSGPPEEaaRPAAPAAPA 622
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 673 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTT 752
Cdd:PRK07764 623 APAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPA 702
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 753 PKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSP 832
Cdd:PRK07764 703 PAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782
|
410
....*....|....*....
gi 735997424 833 DESTPELSAEPTPKALENS 851
Cdd:PRK07764 783 EEMAEDDAPSMDDEDRRDA 801
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
495-761 |
2.35e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 45.83 E-value: 2.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 495 EPAPTTTKSAPTTPKE-PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPK 573
Cdd:PHA03378 552 EPASTEPVHDQLLPAPgLGPLQIQPLTSPTTSQLASSAPSYAQTPWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPLRPI 631
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 574 ETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 653
Cdd:PHA03378 632 PMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPP 711
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 654 EPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKE-- 731
Cdd:PHA03378 712 GRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRpr 791
|
250 260 270
....*....|....*....|....*....|....
gi 735997424 732 --PAPTTPKGTAPTT--LKEPAPTTPKKPAPKEL 761
Cdd:PHA03378 792 gaPTPQPPPQAGPTSmqLMPRAAPGQQGPTKQIL 825
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
442-548 |
2.42e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.48 E-value: 2.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 442 APTAPKKPAPTTPKEPAPTTP-KEPAPTTTKEPSPTTPkEPAPTTTKSAPTTTKEPAPTTtkSAPTTPKEPSPTTTKEPA 520
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPAAA-PAAAASAPAAPPAAAPPAPVA--APAAAAPAAAPAAAPAAV 445
|
90 100
....*....|....*....|....*...
gi 735997424 521 PTTPKEPAPTTPKKPAPTTPKEPAPTTP 548
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPEPAVA 473
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
457-607 |
2.69e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.24 E-value: 2.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 457 PAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTtksAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 536
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQ---APAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997424 537 PTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA--------PTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEEL 607
Cdd:PRK07994 443 PAAASRARPVNSALERLASVRPAPSALEKAPAkkeayrwkATNPVEVKKEPVATPKALKKALEHEKTPELAAKLAAEAI 521
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
279-532 |
2.71e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 279 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPT 358
Cdd:PHA03307 69 TGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPP 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 359 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepAPTTPKEPTPTTPKEPAPTTKEPAPTTP 438
Cdd:PHA03307 149 AASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPST---PPAAASPRPPRRSSPISASASSPAPAPG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 439 KEPAPTAPKKPAPTTPKEPAPTTPKEpaptTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPtttkE 518
Cdd:PHA03307 226 RSAADDAGASSSDSSSSESSGCGWGP----ENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSP----S 297
|
250
....*....|....
gi 735997424 519 PAPTTPKEPAPTTP 532
Cdd:PHA03307 298 PSPSSPGSGPAPSS 311
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
332-511 |
2.78e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.34 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPkEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT----- 406
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT-TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnleel 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 407 --------------------------------------------PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPA 442
Cdd:PRK14948 445 wqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAFAKVLGRSIKLNLESQSGSASNTAKTP 524
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997424 443 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 511
Cdd:PRK14948 525 PPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
724-817 |
2.88e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.65 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 724 PAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAptttkgptsttsdKPAPTTPKETAPTTPKEPAPTTPKKPAP 803
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPA-------------AAAPAAPPKPAAAAAAAAAPAAPPAAAA 104
|
90
....*....|....
gi 735997424 804 TTPETPPPTTSEVS 817
Cdd:PRK12270 105 AAAPAAAAVEDEVT 118
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
709-802 |
2.89e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.19 E-value: 2.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 709 APTTPKGTAPTTPKEPAPTTPKePAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkGPTSTTSDKPAPTTPKETAPT 788
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATP---------PPVPPRPVAPPVPHTPESAPK 430
|
90
....*....|....*.
gi 735997424 789 TPKE--PAPTTPKKPA 802
Cdd:PRK14950 431 LTRAaiPVDEKPKYTP 446
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
368-535 |
3.11e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 44.95 E-value: 3.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 368 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptPTTPKEPAPTTKEPAPTTPKEPAPTAPK 447
Cdd:PRK14948 363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT------------TPSPPPAKASPPIPVPAEPTEPSPTPPA 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 448 KPAPTTPKE----------------------------------------------------------------------- 456
Cdd:PRK14948 431 NAANAPPSLnleelwqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnl 510
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 457 -----PAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 531
Cdd:PRK14948 511 esqsgSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTK 590
|
....
gi 735997424 532 PKKP 535
Cdd:PRK14948 591 DSSP 594
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
572-798 |
3.35e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.25 E-value: 3.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 572 PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 651
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 652 PKEPAPTTPKETAPTTPkgtapttlkePAPTTPKKPAPKELAPTTtkeptsttsdKPAPTTPKgtapttPKEPAPTTPKE 731
Cdd:PRK12323 455 AAAPAAAARPAAAGPRP----------VAAAAAAAPARAAPAAAP----------APADDDPP------PWEELPPEFAS 508
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997424 732 PAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKEtAPTTPKEPAPTTP 798
Cdd:PRK12323 509 PAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVV-APRPPRASASGLP 574
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
526-787 |
3.38e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 3.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 526 EPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPE 605
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 606 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTP----KEPAPT---TPKETAPTTPKGTAPTTLKE 678
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPpdaaFEPAPRaaaPSAATPAAVPDARAPAAASR 518
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 679 P-APTTPKKPAPKELAPTTTKEPTSTTSDKPAP------------TTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTtl 745
Cdd:PRK07003 519 EdAPAAAAPPAPEARPPTPAAAAPAARAGGAAAaldvlrnagmrvSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQV-- 596
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 735997424 746 kepapTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAP 787
Cdd:PRK07003 597 -----PTPRARAATGDAPPNGAARAEQAAESRGAPPPWEDIP 633
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
647-852 |
3.84e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.86 E-value: 3.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 647 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAP 726
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 727 TTPKEPAPTTPKGTAPttlKEPAPTTPKKPAPKELAPTTtkgptsttsDKPAPTTPKETAPTTPKEPapttpkKPAPTTp 806
Cdd:PRK07994 446 ASRARPVNSALERLAS---VRPAPSALEKAPAKKEAYRW---------KATNPVEVKKEPVATPKAL------KKALEH- 506
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 735997424 807 etpppttsevstptttkepttihkspdESTPELSAEPTPKALENSP 852
Cdd:PRK07994 507 ---------------------------EKTPELAAKLAAEAIERDP 525
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
636-801 |
3.96e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.92 E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 636 PKEPAPTTPKEPAPTTPKEP-APTTPKETAPTTPKGTA--------------PTTLKEPAPTTPKKPAPKEL-------- 692
Cdd:PLN03209 330 PKESDAADGPKPVPTKPVTPeAPSPPIEEEPPQPKAVVprplspytayedlkPPTSPIPTPPSSSPASSKSVdavakpae 409
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 693 --APTTTKEPTSTTSDKPAPTTPKGTAPTTP--KEPAPTTPKEPAPTTPKGTAPTTLKEPA-PTTPKKPAPKELAPTTTK 767
Cdd:PLN03209 410 pdVVPSPGSASNVPEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSSTSSvPAVPDTAPATAATDAAAP 489
|
170 180 190
....*....|....*....|....*....|....
gi 735997424 768 GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKP 801
Cdd:PLN03209 490 PPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAP 523
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
361-481 |
4.20e-04 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 41.96 E-value: 4.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 361 KEPAPTTPKEPAPTTTKEPAPTTTKSaPTTPKEPAPTTPKKPAPTTPKepapttpKEPTPTTPKEPAPTTKEPAPTTPKE 440
Cdd:pfam02389 6 KQPCQPPPQEPCVPTTKEPCHSKVPE-PCNPKVPEPCCPKVPEPCCPK-------VPEPCCPKVPEPCCPKVPEPCYPKV 77
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 735997424 441 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 481
Cdd:pfam02389 78 PEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVP 118
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
672-792 |
4.24e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.80 E-value: 4.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 672 APTTLKEPAPTTPKKPAPKelaptttkeptsttSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKgtapttlkePAPT 751
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPV--------------RPTPAPSTRPKAAAAANIPPKEPVRETATPPPVP---------PRPV 417
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 735997424 752 TPKKPAPKELAPTTTKGPTsttsdkPAPTTPKETAPTTPKE 792
Cdd:PRK14950 418 APPVPHTPESAPKLTRAAI------PVDEKPKYTPPAPPKE 452
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
347-519 |
4.53e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 44.57 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 347 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP 426
Cdd:PRK14948 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPP-----PAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 427 APT------TKEPAPTT-------------------------------------------------------PKEPAPTA 445
Cdd:PRK14948 441 LEElwqqilAKLELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesQSGSASNT 520
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997424 446 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 519
Cdd:PRK14948 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
598-693 |
4.62e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 4.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 598 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlk 677
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV--- 113
|
90
....*....|....*.
gi 735997424 678 ePAPTTPKKPAPKELA 693
Cdd:PRK12270 114 -EDEVTPLRGAAAAVA 128
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
432-548 |
4.67e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.99 E-value: 4.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 432 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkePAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT-PKE 510
Cdd:NF040712 208 EPADARPEEVEPAPAAEGAPATDSDPAEAGT--PDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPaPGA 285
|
90 100 110
....*....|....*....|....*....|....*...
gi 735997424 511 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 548
Cdd:NF040712 286 AETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
374-497 |
5.08e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.42 E-value: 5.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 374 TTTKEPAPTTtksAPTTPKEPAPTTPkKPAPTTPkepapttpkeptpttpkepaPTTKEPAPTTPKEPAP-TAPKKPAPT 452
Cdd:PRK14950 359 LLVPVPAPQP---AKPTAAAPSPVRP-TPAPSTR--------------------PKAAAAANIPPKEPVReTATPPPVPP 414
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 735997424 453 TPKEPAPTTPKEPAPTTTKE--PSPTTPKEPAPTTTKSAPTTTKEPA 497
Cdd:PRK14950 415 RPVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKEEEKALIADG 461
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
265-462 |
5.45e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 5.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 265 SAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTT 344
Cdd:PRK12323 379 AAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAP 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 345 TKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkePAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 424
Cdd:PRK12323 459 AAAARPAAAGPRPVAAAAAAAPARAAPAAAPA--PADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDD 536
|
170 180 190
....*....|....*....|....*....|....*...
gi 735997424 425 EPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 462
Cdd:PRK12323 537 AFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
441-542 |
5.69e-04 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.07 E-value: 5.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 441 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKsapttPKEPSPTTTKEPA 520
Cdd:COG3266 265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAK-----PVVTETAAPAAPA 339
|
90 100
....*....|....*....|...
gi 735997424 521 P-TTPKEPAPTTPKKPAPTTPKE 542
Cdd:COG3266 340 PeAAAAAAAPAAPAVAKKLAADE 362
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
343-758 |
6.07e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 44.52 E-value: 6.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 343 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPT-TPKEPAPTTPKEPTPT 421
Cdd:pfam05109 413 TTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSpTPAGTTSGASPVTPSP 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 422 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTtPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKePAPTTT 501
Cdd:pfam05109 493 SPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPT-PNATSPTLGKTSPTSAVTTPTPNATSPTPAVTT-PTPNAT 570
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 502 KSAPTTPKEPSPTTTKEPAPTTP----KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKepapttpkeTAP 577
Cdd:pfam05109 571 IPTLGKTSPTSAVTTPTPNATSPtvgeTSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITS---------SST 641
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 578 TTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 657
Cdd:pfam05109 642 SSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTSTKP 721
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 658 TTPKETAPTTPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPA 733
Cdd:pfam05109 722 GEVNVTKGTPPKNAtspqAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTTDYGGDSTTPRTRYNATTYLPP 801
|
410 420
....*....|....*....|....*
gi 735997424 734 PTTPKGTAPTTLKEPAPTTPKKPAP 758
Cdd:pfam05109 802 STSSKLRPRWTFTSPPVTTAQATVP 826
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
708-869 |
6.62e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.10 E-value: 6.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 708 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTtPKKPAPKELAPTTTKGPTSTTSDK-PAPTTPKETA 786
Cdd:PRK12323 381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPA-RRSPAPEALAAARQASARGPGGAPaPAPAPAAAPA 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 787 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEpttihksPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 866
Cdd:PRK12323 460 AAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPP-------PWEELPPEFASPAPAQPDAAPAGWVAESIPDPATA 532
|
...
gi 735997424 867 KPE 869
Cdd:PRK12323 533 DPD 535
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
318-391 |
6.82e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 6.82e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997424 318 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP 391
Cdd:PRK12270 46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
503-721 |
6.85e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.10 E-value: 6.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 503 SAPTTPKE-PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPkepaptttkkpAPTTPKEPAPTTPKETAPTTPK 581
Cdd:PRK12323 372 AGPATAAAaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARA-----------VAAAPARRSPAPEALAAARQAS 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 582 KLTPTTPEKLAPTTPEKPAPTTPEelAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP--TTPKEPAPTTPKEPAPT- 658
Cdd:PRK12323 441 ARGPGGAPAPAPAPAAAPAAAARP--AAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPweELPPEFASPAPAQPDAAp 518
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997424 659 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPtsttsdkPAPTTPKGTAPTTP 721
Cdd:PRK12323 519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV-------VAPRPPRASASGLP 574
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
433-526 |
7.02e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.03 E-value: 7.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 433 PAPTTPKePAPTAPKKPAPTTPKEPAPTTPkEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKE-- 510
Cdd:PRK14950 376 PSPVRPT-PAPSTRPKAAAAANIPPKEPVR-ETATPPPVPPRPVAP-----------------PVPHTPESAPKLTRAai 436
|
90
....*....|....*.
gi 735997424 511 PSPTTTKEPAPTTPKE 526
Cdd:PRK14950 437 PVDEKPKYTPPAPPKE 452
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
495-760 |
7.26e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 7.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 495 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA--------PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKE 566
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGasavpavtAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 567 PAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 646
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASR 518
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 647 P-APTTPKEPAPttpkETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPA 725
Cdd:PRK07003 519 EdAPAAAAPPAP----EARPPTPAAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAV 594
|
250 260 270
....*....|....*....|....*....|....*.
gi 735997424 726 PT-TPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKE 760
Cdd:PRK07003 595 QVpTPRARAATGDAPPNGAARAEQAAESRGAPPPWE 630
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
356-569 |
7.31e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 44.31 E-value: 7.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 356 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTtPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 435
Cdd:PRK10263 324 AAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQ 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 436 TTPKEPAPTAPKK-------PAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP-APTTTKSAPTTTKEPAPTTTKSAPTT 507
Cdd:PRK10263 403 PQQPYYAPAAEQPaqqpyyaPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTfAPQSTYQTEQTYQQPAAQEPLYQQPQ 482
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 508 PKEPSPTttKEPAPTTpKEPAPTTPK----------------------KPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPK 565
Cdd:PRK10263 483 PVEQQPV--VEPEPVV-EETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAA 559
|
....
gi 735997424 566 EPAP 569
Cdd:PRK10263 560 AVSP 563
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
332-400 |
7.45e-04 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 44.22 E-value: 7.45e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997424 332 SAPTTPKEPAPtttkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkEPAPTTTKSAPTTPKEPAPTTPK 400
Cdd:COG5373 42 EAASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAPPAAAE-APAPAAAAPPAEAEPAAAPAAAS 105
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
495-657 |
7.47e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.09 E-value: 7.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 495 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 574
Cdd:PRK07994 363 APLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 575 TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 654
Cdd:PRK07994 443 PAAASRARPVNSALERLASVRPAPSALEKAPA---------------KKEAYRWKATNPVEVKKEPVATPKALKKALEHE 507
|
...
gi 735997424 655 PAP 657
Cdd:PRK07994 508 KTP 510
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
386-549 |
7.54e-04 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 43.62 E-value: 7.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 386 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 465
Cdd:pfam13254 195 GRPNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPPPKTKELPKDSEEP 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 466 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPttpkEPAPTTPKKP--APTTPKEP 543
Cdd:pfam13254 275 AAPSKSAEASTEKKEPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSP----KPKPQSPPKDfrANLRSREV 350
|
....*.
gi 735997424 544 APTTPK 549
Cdd:pfam13254 351 PKDKSK 356
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
353-654 |
7.91e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.91 E-value: 7.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 353 KEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSApTTPKEPapttpKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKE 432
Cdd:PTZ00449 506 KHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKES-DEPKEG-----GKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKP 579
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 433 PAPTTPKepAPTAPKKP----APTTPKEP-APTTPKEPA----PTTTKEP-SPTTPKEPAPTTTKSAPTTTKEPAPTTTK 502
Cdd:PTZ00449 580 EFPKDPK--HPKDPEEPkkpkRPRSAQRPtRPKSPKLPElldiPKSPKRPeSPKSPKRPPPPQRPSSPERPEGPKIIKSP 657
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 503 SAPTTPKEPSPTTTKE--------PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTP-- 572
Cdd:PTZ00449 658 KPPKSPKPPFDPKFKEkfyddyldAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEPig 737
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 573 KETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKaaAPNTPKEPAPTTPKEpAPTTP 652
Cdd:PTZ00449 738 DPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMK--RPDSPSEHEDKPPGD-HPSLP 814
|
..
gi 735997424 653 KE 654
Cdd:PTZ00449 815 KK 816
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
630-798 |
8.07e-04 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 43.87 E-value: 8.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 630 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPkgTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 709
Cdd:PRK10811 851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVE--AVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQP 928
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 710 PTTPKGTAPTtpkepAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTtsdkPAPTTPKETAPTT 789
Cdd:PRK10811 929 QVITESDVAV-----AQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAE----VAAEVETVTAVEP 999
|
....*....
gi 735997424 790 PKEPAPTTP 798
Cdd:PRK10811 1000 EVAPAQVPE 1008
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
601-802 |
8.71e-04 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 43.87 E-value: 8.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 601 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTpkEPAPTTPKEPAPTT-PKETAPTTPKGTAPTTLKEP 679
Cdd:PRK10811 846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAePQPEEVVVVETTHPEVIAAP 923
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 680 APTTPKKPAPKELAPtttkeptsttsdkpAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 759
Cdd:PRK10811 924 VTEQPQVITESDVAV--------------AQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAA 989
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 735997424 760 ELAPTTTKGPTSTTSDKPAPTTPKE--TAPTTpKEPAPTTPKKPA 802
Cdd:PRK10811 990 EVETVTAVEPEVAPAQVPEATVEHNhaTAPMT-RAPAPEYVPEAP 1033
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
655-881 |
9.38e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.71 E-value: 9.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 655 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkeptsttsdKPAPTTPKGTAPTTPKEPAPTTPKEPAP 734
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAA-----------------APAAAAAARAVAAAPARRSPAPEALAAA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 735 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTttkgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTS 814
Cdd:PRK12323 437 RQASARGPGGAPAPAPAPAAAPAAAARPAA------------AGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPP 504
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 815 EVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEP-GVPTTKTPAATKPEMTTTAKDKTTER 881
Cdd:PRK12323 505 EFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPaAAPAPRAAAATEPVVAPRPPRASASG 572
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
385-482 |
9.56e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.73 E-value: 9.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 385 KSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 464
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPA-------------------------AAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAA 91
|
90
....*....|....*...
gi 735997424 465 PAPTTTKEPSPTTPKEPA 482
Cdd:PRK12270 92 AAAAPAAPPAAAAAAAPA 109
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
445-572 |
1.01e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 445 APKKPAPTTPKEPAPTTPKEPAPtttkEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 524
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPAA----APVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 735997424 525 KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTP 572
Cdd:PRK14951 445 VALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
337-467 |
1.04e-03 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 40.81 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 337 PKEPAPTTTKSaPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSA-PTTPKEPAPTTPKKPAPTTPkepapttp 415
Cdd:pfam02389 13 PQEPCVPTTKE-PCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPePCCPKVPEPCYPKVPEPCSP-------- 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 735997424 416 keptpttpkepapttKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 467
Cdd:pfam02389 84 ---------------KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
330-402 |
1.12e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 43.41 E-value: 1.12e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997424 330 IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP 402
Cdd:PRK14948 522 KTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
504-606 |
1.17e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.26 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 504 APTTPKEPSPTTTKEPAPTTPKePAPTTPKKPAPTTPKEPAP----TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPtt 579
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEpvreTATPPPVPPRPVAPPVPHTPESAPKLTRAAIP-- 437
|
90 100
....*....|....*....|....*..
gi 735997424 580 pkkltpttpeklAPTTPEKPAPTTPEE 606
Cdd:PRK14950 438 ------------VDEKPKYTPPAPPKE 452
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
336-478 |
1.21e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.83 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 336 TPKEPAPTTTKSAPTTPkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT--PKEPAPTTPKKPAPTTPKEPAPT 413
Cdd:NF040712 191 DFGRPLRPLATVPRLAR-EPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarRRRAGVEQPEDEPVGPGAAPAAE 269
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997424 414 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 478
Cdd:NF040712 270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
450-548 |
1.21e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.91 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 450 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPkEPSPTTTKEPAPTTPKEPAP 529
Cdd:COG3266 254 ALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAA-APAEAAAPQPTAAKPVVTET 332
|
90 100
....*....|....*....|
gi 735997424 530 TTPKKPAP-TTPKEPAPTTP 548
Cdd:COG3266 333 AAPAAPAPeAAAAAAAPAAP 352
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
589-881 |
1.22e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.52 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 589 EKLAPTTPEKP-----APTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTP----KEPAPTTPKEPAPTT 659
Cdd:PTZ00449 494 KKLAPIEEEDSdkhdePPEGPEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEgevgKKPGPAKEHKPSKIP 573
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 660 PKETAPTTPKgtAPTTLKEP-APTTPKKPAPKELAPTTTKEPTSTTSDKPApTTPKGTAPTTPKEP-APTTPKEPA-PTT 736
Cdd:PTZ00449 574 TLSKKPEFPK--DPKHPKDPeEPKKPKRPRSAQRPTRPKSPKLPELLDIPK-SPKRPESPKSPKRPpPPQRPSSPErPEG 650
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 737 PKgtAPTTLKEP-APTTPKKPAPKE--------LAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPA----------PTT 797
Cdd:PTZ00449 651 PK--IIKSPKPPkSPKPPFDPKFKEkfyddyldAAAKSKETKTTVVLDESFESILKETLPETPGTPFttprplppklPRD 728
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 798 PKKPAPTTPETPPPTTSEVSTPTTTKEPTT-IHKSPDES-----TPELSAEPTPKALENSPKE----PGVPTTKTPAATK 867
Cdd:PTZ00449 729 EEFPFEPIGDPDAEQPDDIEFFTPPEEERTfFHETPADTplpdiLAEEFKEEDIHAETGEPDEamkrPDSPSEHEDKPPG 808
|
330
....*....|....
gi 735997424 868 PEMTTTAKDKTTER 881
Cdd:PTZ00449 809 DHPSLPKKRHRLDG 822
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
633-758 |
1.38e-03 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 40.42 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 633 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKElaptttkeptsttSDKPAPTT 712
Cdd:pfam02389 8 PCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCC-------------PKVPEPCY 74
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 735997424 713 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAP 758
Cdd:pfam02389 75 PKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
387-518 |
1.41e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.87 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 387 APTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkePAPTTPKEPAPTAPkkpAPTTPKEPAPTTPKEPA 466
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPT------------------------PAPSTRPKAAAAAN---IPPKEPVRETATPPPVP 413
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 735997424 467 PTTTKEPSPTTPKEPaptttksaptttkEPAPTTTKSAPTTPKEPSPTTTKE 518
Cdd:PRK14950 414 PRPVAPPVPHTPESA-------------PKLTRAAIPVDEKPKYTPPAPPKE 452
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
707-882 |
1.43e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 707 KPAPTTPKGTAPTTPKEPAPTtpkEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETA 786
Cdd:PRK07994 360 HPAAPLPEPEVPPQSAAPAAS---AQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGAT 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 787 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHkSPDESTPELSAEP---TPKALENSPKEPgvpttKTp 863
Cdd:PRK07994 437 KAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAY-RWKATNPVEVKKEpvaTPKALKKALEHE-----KT- 509
|
170
....*....|....*....
gi 735997424 864 aatkPEMTTTAKDKTTERD 882
Cdd:PRK07994 510 ----PELAAKLAAEAIERD 524
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
331-459 |
1.45e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.78 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 331 KSAPTTPKE----PAPTTTKSAPTTPKEPAPTTTkePAPTTPKEPAPtttkepaptttkSAPTTPKEPAPTTPKKPAPTT 406
Cdd:PRK14951 378 KKTPARPEAaapaAAPVAQAAAAPAPAAAPAAAA--SAPAAPPAAAP------------PAPVAAPAAAAPAAAPAAAPA 443
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 735997424 407 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPkKPAPTTPKEPAP 459
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP-AAARLTPTEEGD 495
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
630-738 |
1.47e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 42.84 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 630 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTlkEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 709
Cdd:PRK14971 387 AAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPP--AAVPVNPPSTAPQAVRPAQFKEEKKIPVSKVS 464
|
90 100
....*....|....*....|....*....
gi 735997424 710 PTTPKGTAPTTPKEPAPTTPKEPAPTTPK 738
Cdd:PRK14971 465 SLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
598-739 |
1.66e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.78 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 598 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPT-TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTL 676
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997424 677 KEPAPTTPKKPAPKELAPtttkeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKG 739
Cdd:PRK14951 445 VALAPAPPAQAAPETVAI-------------PVRVAPEPAVASAAPAPAAAPAAARLTPTEEG 494
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
342-478 |
1.72e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.45 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 342 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPT 421
Cdd:NF040712 190 PDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAE 269
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 735997424 422 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTtpkEPAPTTPKEPAPTTTKEPSPTTP 478
Cdd:NF040712 270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPA---APAAPAAPEAEEPARPEPPPAPK 323
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
434-501 |
1.93e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.19 E-value: 1.93e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 434 APTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT 501
Cdd:TIGR00601 82 GKVAPPAATPTSAPTPTPSPP--ASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAA 147
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
362-508 |
2.11e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.27 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 362 EPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAP----TTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 437
Cdd:PRK13108 294 EALEREPAELAAAAVASAASAVGPVGPGEPNQPDDVAEAVKAEvaevTDEVAAESVVQVADRDGESTPAVEETSEADIER 373
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997424 438 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP 508
Cdd:PRK13108 374 EQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEP 444
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
290-473 |
2.42e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.33 E-value: 2.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 290 PTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTtksapttpkEPAPTTTKEPAPTTPK 369
Cdd:PRK10811 848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVA---------EPQPEEVVVVETTHPE 918
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 370 EPAPTTTKEPAPTTTKSAPT---TPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAP 446
Cdd:PRK10811 919 VIAAPVTEQPQVITESDVAVaqeVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVE 998
|
170 180 190
....*....|....*....|....*....|....*
gi 735997424 447 KKPAPTTPKEP--------APTTpKEPAPTTTKEP 473
Cdd:PRK10811 999 PEVAPAQVPEAtvehnhatAPMT-RAPAPEYVPEA 1032
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
386-548 |
2.64e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.33 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 386 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTkEPAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEP 465
Cdd:PRK10811 844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV-EAVAEVVEEPVVVAE--PQPEEVVVVETTHPEVI 920
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 466 APTTTKEPSPTTPKE-------PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPsPTTTKEPAPTTPKEPAPTTPKKPAPT 538
Cdd:PRK10811 921 AAPVTEQPQVITESDvavaqevAEHAEPVVEPQDETADIEEAAETAEVVVAEP-EVVAQPAAPVVAEVAAEVETVTAVEP 999
|
170
....*....|
gi 735997424 539 TPKEPAPTTP 548
Cdd:PRK10811 1000 EVAPAQVPEA 1009
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
341-407 |
3.11e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.85 E-value: 3.11e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 341 APTTTKSAPT---TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtttkSAPTTPKEPAPTTPKKPAPTTP 407
Cdd:PRK14954 381 APSPAGSPDVkkkAPEPDLPQPDRHPGPAKPEAPGARPAELPSP----ASAPTPEQQPPVARSAPLPPSP 446
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
336-547 |
3.22e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 336 TPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTTKEPAPTTTKSAPTT-------------PKEPA 395
Cdd:PHA03247 268 APETARGATGPPPPPEAAAPNGAAAPPDgvwgaalAGAPLALPAPPDPPPPAPAGDAEEEDDedgamevvsplprPRQHY 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 396 PTT-PKKPAPT-TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTpKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEP 473
Cdd:PHA03247 348 PLGfPKRRRPTwTPPSSLEDLSAGRHHPKRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPAS 426
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997424 474 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 547
Cdd:PHA03247 427 APPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLGRHPDT 500
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
270-409 |
3.28e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 41.76 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 270 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPAlTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP 349
Cdd:COG3266 236 AAEVLTARLVLLLLIIGSALKAPSQASSASAPA-TTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAP 314
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 350 TTPKEPAPTTTKepapttPKEPAPTTTKEPAPTTTKSApttpkePAPTTPKKPAPTTPKE 409
Cdd:COG3266 315 AEAAAPQPTAAK------PVVTETAAPAAPAPEAAAAA------AAPAAPAVAKKLAADE 362
|
|
| TALPID3 |
pfam15324 |
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ... |
447-671 |
3.41e-03 |
|
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.
Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 42.18 E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 447 KKPAPTTPKEPAPTTPKE---PAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 523
Cdd:pfam15324 964 QREPPVAASVPGDLPTKEtllPTPVPTPQPTPPCSPPSPLKEPSPVKTPDSSPCVSEHDFFPVKEIPPEKGADTGPAVSL 1043
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 524 PKEPAPTtpkkPAPTTPKEPAPTTPkepapTTTKKPAPTTPKEPAPTTPKETAPttpkkltpttpeklAPTTPEKPAPTT 603
Cdd:pfam15324 1044 VITPTVT----PIATPPPAATPTPP-----LSENSIDKLKSPSPELPKPWEDSD--------------LPLEEENPNSEQ 1100
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 604 pEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT 671
Cdd:pfam15324 1101 -EELHPRAVVMSVARDEEPESVVLPASPPEPKPLAPPPLGAAPPSPPQSPSSSSSTLESSSSLTVTET 1167
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
333-548 |
3.44e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 333 APTTPKEPAPTTTKSAPTTPKE-PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTksaPTTPKEPAPTTPKKPAPTTPKEPA 411
Cdd:PHA03378 650 TPHQPPQVEITPYKPTWTQIGHiPYQPSPTGANTMLPIQWAPGTMQPPPRAPT---PMRPPAAPPGRAQRPAAATGRARP 726
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 412 PTTPKEPTPTTPKEpapttkePAPTTPKEPAPTAPKKPAPT-TPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAP 490
Cdd:PHA03378 727 PAAAPGRARPPAAA-------PGRARPPAAAPGRARPPAAApGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPP 799
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 491 TTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTpKKPAPTTPKEPAPTTP 548
Cdd:PHA03378 800 PQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSL-KKPAALERQAAAGPTP 856
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
496-689 |
3.66e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 3.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 496 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 575
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 576 APTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNtPKEPAPTTPKEPAPTTPKEP 655
Cdd:PRK12323 454 PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPA-QPDAAPAGWVAESIPDPATA 532
|
170 180 190
....*....|....*....|....*....|....
gi 735997424 656 APTTPKETAPTtpkgtAPTTLKEPAPTTPKKPAP 689
Cdd:PRK12323 533 DPDDAFETLAP-----APAAAPAPRAAAATEPVV 561
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
524-799 |
3.96e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 41.45 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 524 PKEPAPTTPKKPAPTTPKEPAPTTPKEPAptttkkpapttpkepapTTPKETAPTTPKKLTPTTPEKLAPttpekpaPTT 603
Cdd:PLN03209 330 PKESDAADGPKPVPTKPVTPEAPSPPIEE-----------------EPPQPKAVVPRPLSPYTAYEDLKP-------PTS 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 604 PeelapttpeepTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTP-KEPAPTTPKETAPTTPKgTAPTTLKEPAPT 682
Cdd:PLN03209 386 P-----------IPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSASNVPeVEPAQVEAKKTRPLSPY-ARYEDLKPPTSP 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 683 TPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPK----EPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAP 758
Cdd:PLN03209 454 SPTAPTGVSPSVSSTSSVPAVPDTAPATAATDAAAPPPANmrplSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVG 533
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 735997424 759 KELAPTTTKGPTSTTSDKPAPTTP----KETAPttPKEPAPTTPK 799
Cdd:PLN03209 534 NSAPPTALADEQHHAQPKPRPLSPytmyEDLKP--PTSPTPSPVL 576
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
654-865 |
4.09e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.76 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 654 EPAPTTPKETAPTTPkGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPttpkEPAPTTPKEPA 733
Cdd:PRK07003 359 EPAVTGGGAPGGGVP-ARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATR----AEAPPAAPAPP 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 734 PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKgptsttsDKPAPTTPKETAPTTPKEPAPttPKKPAPTTPETPPPTT 813
Cdd:PRK07003 434 ATADRGDDAADGDAPVPAKANARASADSRCDERD-------AQPPADSGSASAPASDAPPDA--AFEPAPRAAAPSAATP 504
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 735997424 814 SEVSTPTTTKEpttihkSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAA 865
Cdd:PRK07003 505 AAVPDARAPAA------ASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAA 550
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
666-791 |
4.39e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 41.30 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 666 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTL 745
Cdd:PRK14971 368 DASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAV 447
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 735997424 746 KEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 791
Cdd:PRK14971 448 RPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
592-680 |
4.92e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.41 E-value: 4.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 592 APTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKgt 671
Cdd:PRK12270 39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE-- 116
|
....*....
gi 735997424 672 aPTTLKEPA 680
Cdd:PRK12270 117 -VTPLRGAA 124
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
477-544 |
5.07e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.41 E-value: 5.07e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 477 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP--KEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 544
Cdd:PRK12757 111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPprQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
330-524 |
5.17e-03 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 40.94 E-value: 5.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 330 IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 409
Cdd:PRK13914 143 VTSTPVAPTQEVKKETTTQQAAPAAETKTEVKQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVKYGVSVQ 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 410 PAPTTPKEPTPTTPKEPAPTTKEPAPTTP-----KEPAPTAPKKPAP----TTPKEPAPTTPKEPAP---TTTKEPSPTT 477
Cdd:PRK13914 223 DIMSWNNLSSSSIYVGQKLAIKQTANTATpkaevKTEAPAAEKQAAPvvkeNTNTNTATTEKKETTTqqqTAPKAPTEAA 302
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 735997424 478 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 524
Cdd:PRK13914 303 KPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNS 349
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
355-544 |
5.47e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 5.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 355 PAPTTTKEPAPTTPKEPAPTTTKePAPTTTKSAPTTPKEPAP---------TTPKKPAPTTPKEPAPTTPKEPTPTTPKE 425
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATG-PPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGA 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 426 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT------PKEPAPTTTKEPSP--TTPKEPAPTTTKSAPTTTKEPA 497
Cdd:PHA03247 334 MEVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSagrhhpKRASLPTRKRRSARhaATPFARGPGGDDQTRPAAPVPA 413
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 735997424 498 PTTTKSAPTTPK-EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 544
Cdd:PHA03247 414 SVPTPAPTPVPAsAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEP 461
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
593-802 |
5.52e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 5.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 593 PTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP---------TTPKEPAPTTPKEPAPTTPKET 663
Cdd:PHA03247 247 PLRGDIAAPAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEE 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 664 ApTTPKGTAPTTLKEPAPTT------PKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTP 737
Cdd:PHA03247 327 E-DDEDGAMEVVSPLPRPRQhyplgfPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQT 405
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997424 738 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPA 802
Cdd:PHA03247 406 RPAAPVPASVPTPAPTPVPASAPPPPATPL---------PSAEPGSDDGPAPPPERQPPAPATEP 461
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
496-568 |
5.68e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 5.68e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997424 496 PAPTTTKSAPTTPKEPSPTTTKEPAP----TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 568
Cdd:PRK14950 376 PSPVRPTPAPSTRPKAAAAANIPPKEpvreTATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAPPKE 452
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
282-407 |
5.72e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.85 E-value: 5.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 282 PTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTpttiKSAPTTPKEPAPtttkSAPTTPKEPAPTTTK 361
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAA----ASAPAAPPAAAP----PAPVAAPAAAAPAAA 437
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 735997424 362 EPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTP 407
Cdd:PRK14951 438 PAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP 483
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
433-529 |
5.75e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.08 E-value: 5.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 433 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPttpkepaptttksaptttkEPAPTTTKSAPTTPKEPS 512
Cdd:PRK14954 382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSP-------------------ASAPTPEQQPPVARSAPL 442
|
90
....*....|....*..
gi 735997424 513 PTTTKEPAPTTPKEPAP 529
Cdd:PRK14954 443 PPSPQASAPRNVASGKP 459
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
455-531 |
5.99e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 5.99e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997424 455 KEPAPTTPKEPAPTTTKEPSPTTPkepaptttksapTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 531
Cdd:COG5373 40 AAEAASAPAEPEPEAAAAATAAAP------------EAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
629-691 |
6.04e-03 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 6.04e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997424 629 KAAAPNTPKEPAPT---TPKEPAPTTPKEPAPTTPkETAPTTPKGTAPTTLKEPAPTTP-KKPAPKE 691
Cdd:COG5373 40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPaAAPAAAS 105
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
264-543 |
6.68e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 40.71 E-value: 6.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 264 TSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPA-----LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 338
Cdd:pfam17823 97 LSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAalpseAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPR 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 339 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTT----TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTT 414
Cdd:pfam17823 177 TAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHpaagTALAAVGNSSPAAGTVTAAVGTVTPAALATL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 415 PKEPTPTTPKEPAPTTKEPAPTTPKE----PAPTAPKKPAPTTPKEPAPTTPK----EPAPTTTKEPSPTTPKEPAPTTT 486
Cdd:pfam17823 257 AAAAGTVASAAGTINMGDPHARRLSPakhmPSDTMARNPAAPMGAQAQGPIIQvstdQPVHNTAGEPTPSPSNTTLEPNT 336
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997424 487 KSAPTTTKEPAPTTTKSA---PTTPKEPSPTTTKEP-----APTTPKEPAPTTPKKPAPTTPKEP 543
Cdd:pfam17823 337 PKSVASTNLAVVTTTKAQakePSASPVPVLHTSMIPeveatSPTTQPSPLLPTQGAAGPGILLAP 401
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
332-479 |
6.71e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.89 E-value: 6.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 411
Cdd:COG3469 67 SSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGS 146
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 412 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK 479
Cdd:COG3469 147 TTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPK 214
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
331-459 |
6.77e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 40.91 E-value: 6.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 331 KSAPTTPKEPA-PTTTKSAPTTPkePAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 409
Cdd:PRK14971 369 ASGGRGPKQHIkPVFTQPAAAPQ--PSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQA 446
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 735997424 410 paPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAP 459
Cdd:PRK14971 447 --VRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQK 494
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
285-531 |
7.39e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.52 E-value: 7.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 285 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP-APTTTKEP 363
Cdd:NF033839 277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLeTPKPEVKP 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 364 APTTPKEPAPTTTKEPAPTTtKSAPTTPK---EPAPTTPK---KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 437
Cdd:NF033839 357 QPEKPKPEVKPQPEKPKPEV-KPQPETPKpevKPQPEKPKpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 438 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 517
Cdd:NF033839 436 EKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTN 515
|
250
....*....|....
gi 735997424 518 EPAPTTPKEPAPTT 531
Cdd:NF033839 516 EKATNKPKKSLPST 529
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
591-691 |
7.52e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.56 E-value: 7.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 591 LAPTTPEKPAPTTPEelapttPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTT-PKEPAPTTPKEPAPTTPKETAPTTPK 669
Cdd:PRK14950 360 LVPVPAPQPAKPTAA------APSPVRPTPAPSTRPKAAAAANIPPKEPVRETaTPPPVPPRPVAPPVPHTPESAPKLTR 433
|
90 100
....*....|....*....|..
gi 735997424 670 GTAPTtlkEPAPTTPKKPAPKE 691
Cdd:PRK14950 434 AAIPV---DEKPKYTPPAPPKE 452
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
433-549 |
7.78e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 39.67 E-value: 7.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 433 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK-EP 511
Cdd:PRK10819 42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKrEV 121
|
90 100 110
....*....|....*....|....*....|....*...
gi 735997424 512 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKePAPTTPK 549
Cdd:PRK10819 122 KPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSS 158
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
287-518 |
8.04e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 40.46 E-value: 8.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 287 LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSA-PTTPKEPAPTTTKEPAP 365
Cdd:PRK08691 361 LAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAgPVSNQENNDVPPWEDAP 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 366 TTPKEPAPTTTKEPAPTTTKSAPTTPkepapttpkkpapttPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP-KEPAPT 444
Cdd:PRK08691 441 DEAQTAAGTAQTSAKSIQTASEAETP---------------PENQVSKNKAADNETDAPLSEVPSENPIQATPnDEAVET 505
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997424 445 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSaPTTPKEPSPTTTKE 518
Cdd:PRK08691 506 ETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGG-NNTPSAPPPEFSTE 578
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
646-881 |
8.07e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.92 E-value: 8.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 646 EPAPTTPKEPAPTTPKETAPTtPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPA 725
Cdd:PHA03307 52 AVTVVAGAAACDRFEPPTGPP-PGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSP 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 726 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTT 805
Cdd:PHA03307 131 APDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRS 210
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997424 806 PETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 881
Cdd:PHA03307 211 SPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS 286
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
636-693 |
8.08e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 40.70 E-value: 8.08e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997424 636 PKEPAPTTPKEPAPTTPKEPAPTTPKETAP---TTPKGTAPTTLKEPAPTTPKKPAPKELA 693
Cdd:PRK14954 395 PEPDLPQPDRHPGPAKPEAPGARPAELPSPasaPTPEQQPPVARSAPLPPSPQASAPRNVA 455
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
447-507 |
8.17e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.26 E-value: 8.17e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997424 447 KKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT 507
Cdd:TIGR00601 77 PKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPST 137
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
342-533 |
8.45e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.82 E-value: 8.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 342 PTTTKSAPTTPKEPAPTTTKEPA----PTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPKEPAPTTPKE 417
Cdd:PHA03378 676 PSPTGANTMLPIQWAPGTMQPPPraptPMRPPAAPPGRAQRPAAATGRARP-----PAAAPGRARPPAAAPGRARPPAAA 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 418 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 497
Cdd:PHA03378 751 PGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLT 830
|
170 180 190
....*....|....*....|....*....|....*.
gi 735997424 498 PTTTKSAPTTpKEPSPTTTKEPAPTTPKEPAPTTPK 533
Cdd:PHA03378 831 GGVKRGRPSL-KKPAALERQAAAGPTPSPGSGTSDK 865
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
468-837 |
8.84e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.52 E-value: 8.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 468 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPkepAPTTPKKPAPTTPKEPAPTT 547
Cdd:NF033839 119 STSKSQLQKLMMESQSKVDEAVSKFEKDSSSSSSSGSSTKPETPQPENPEHQKPTTP---APDTKPSPQPEGKKPSVPDI 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 548 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTT 627
Cdd:NF033839 196 NQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKF 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 628 PKAAAPNTPKEP------APTTPKEPAPTTPKEPAPTTPKETAP-TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 700
Cdd:NF033839 276 KKGLTQDTPKEPgnkkpsAPKPGMQPSPQPEKKEVKPEPETPKPeVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 701 TSTTSDKPApTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK-KPAPKELAPTTTKGPTSTTSD-KPA 778
Cdd:NF033839 356 PQPEKPKPE-VKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEvKPQ 434
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997424 779 PTTPK---ETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTP 837
Cdd:NF033839 435 PEKPKpevKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKP 496
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
511-606 |
8.89e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 40.64 E-value: 8.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 511 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPkepaptttkkpapttpKEPAPTTPKETAPTTPKKLTPTTPEK 590
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP----------------AAAAPAAPPKPAAAAAAAAAPAAPPA 101
|
90
....*....|....*.
gi 735997424 591 LAPTTPEKPAPTTPEE 606
Cdd:PRK12270 102 AAAAAAPAAAAVEDEV 117
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
258-378 |
9.47e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.18 E-value: 9.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 258 DGKEKTTS----AKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAsttpkeptpttiKSA 333
Cdd:PRK14950 338 DFQLRTTSygqlPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEP------------VRE 405
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 735997424 334 PTTPKEPAPTTTKSAPTTPKEPAPTTTKE--PAPTTPKEPAPTTTKE 378
Cdd:PRK14950 406 TATPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
707-802 |
9.70e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 9.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 707 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTP 782
Cdd:PRK14951 378 KKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAAsapaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAP 457
|
90 100
....*....|....*....|
gi 735997424 783 KETAPTTPKEPAPTTPKKPA 802
Cdd:PRK14951 458 ETVAIPVRVAPEPAVASAAP 477
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
332-539 |
9.92e-03 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 40.17 E-value: 9.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 332 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPapttpKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 411
Cdd:PRK13914 142 KVTSTPVAPTQEVKKETTTQQAAPAAETKTEV-----KQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVK 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997424 412 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKpapTTPKEPAPTTPKEPAP----------TTTKEPSPTTPKEP 481
Cdd:PRK13914 217 YGVSVQDIMSWNNLSSSSIYVGQKLAIKQTANTATPK---AEVKTEAPAAEKQAAPvvkentntntATTEKKETTTQQQT 293
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 735997424 482 APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 539
Cdd:PRK13914 294 APKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNSNT 351
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
433-482 |
9.97e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 39.26 E-value: 9.97e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 735997424 433 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 482
Cdd:PRK12757 131 PATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180
|
|
| |
