|
Name |
Accession |
Description |
Interval |
E-value |
| UBA_NACA_NACP1 |
cd14415 |
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and ... |
2141-2186 |
1.19e-26 |
|
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and putative NACA-like protein (NACP1); NACA, also called NAC-alpha or alpha-NAC, together with BTF3, also called Beta-NAC, form the nascent polypeptide-associated complex (NAC) which is a cytosolic protein chaperone that contacts the nascent polypeptide chains as they emerge from the ribosome. Besides, NACA has a high affinity for nucleic acids and exists as part of several protein complexes playing a role in proliferation, apoptosis, or degradation. It is a cytokine-modulated specific transcript in the human TF-1 erythroleukemic cell line. It also acts as a transcriptional co-activator in osteoblasts by binding to phosphorylated c-Jun, a member of the activator-protein-1 (AP-1) family. Moreover, NACA binds to and regulates the adaptor protein Fas-associated death domain (FADD). In addition, NACA functions as a novel factor participating in the positive regulation of human erythroid-cell differentiation. Both NACA and BTF3 harbor an NAC domain that mediates the dimerization of the two subunits. By contrast, NACA has an extra ubiquitin-associated (UBA) domain in the C-terminus. In addition to NACA, the family includes NACP1, also called Alpha-NAC pseudogene 1 or NAC-alpha pseudogene 1. The biological function of NACP1 remains unclear.
Pssm-ID: 270598 Cd Length: 46 Bit Score: 103.88 E-value: 1.19e-26
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 163965357 2141 EEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186
Cdd:cd14415 1 EEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 46
|
|
| NAC_NACA |
cd22054 |
nascent polypeptide-associated complex (NAC), alpha subunit; The nascent ... |
2056-2103 |
9.55e-25 |
|
nascent polypeptide-associated complex (NAC), alpha subunit; The nascent polypeptide-associated complex (NAC) is a complex, conserved from archaea to human, that plays an important role in co translational targeting of nascent polypeptides to the endoplasmic reticulum (ER). In eukaryotes, under physiological conditions, the complex is a stable heterodimer of the NAC alpha subunit and the NAC beta subunit, also known as basal transcription factor 3b (BTF3b). An imbalance of the relative concentrations has been observed in diseases, like Alzheimer's, AIDS, and ulcerative colitis. NAC alpha consists of a NAC domain, also present in BTF3, and a unique C-terminal ubiquitin-associated (UBA) domain.
Pssm-ID: 409233 Cd Length: 48 Bit Score: 98.40 E-value: 9.55e-25
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 163965357 2056 GLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDL 2103
Cdd:cd22054 1 GLKPVPGVTRVTIKKSKNILFVINKPDVYKSPGSDTYIVFGEAKIEDL 48
|
|
| NAC |
pfam01849 |
NAC domain; |
2047-2100 |
2.00e-22 |
|
NAC domain;
Pssm-ID: 426474 Cd Length: 54 Bit Score: 92.15 E-value: 2.00e-22
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 163965357 2047 KARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKI 2100
Cdd:pfam01849 1 KLQKALKKLGLKPIPGVEEVNIFKSDGKVLVFNNPKVQKSPGSNTYVVFGEAEE 54
|
|
| UBA_NAC_euk |
cd14358 |
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and its ... |
2151-2186 |
9.83e-20 |
|
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and its homologs mainly found in eukaryotes; The subfamily contains nascent polypeptide-associated complex subunit alpha (NACA), putative NACA-like protein (NACP1), nascent polypeptide-associated complex subunit alpha domain-containing protein 1 (NACAD), and similar proteins. NACA, also called NAC-alpha or Alpha-NAC, together with BTF3, also called Beta-NAC, form the nascent polypeptide-associated complex (NAC) which is a cytosolic protein chaperone that contacts the nascent polypeptide chains as they emerge from the ribosome. Besides, NACA has a high affinity for nucleic acids and exists as part of several protein complexes playing a role in proliferation, apoptosis, or degradation. It is a cytokine-modulated specific transcript in the human TF-1 erythroleukemic cell line. It also acts as a transcriptional co-activator in osteoblasts by binding to phosphorylated c-Jun, a member of the activator-protein-1 (AP-1) family. Moreover, NACA binds to and regulates the adaptor protein Fas-associated death domain (FADD). In addition, NACA functions as a novel factor participating in the positive regulation of human erythroid-cell differentiation. The biological function of NACP1 (also called Alpha-NAC pseudogene 1 or NAC-alpha pseudogene 1) and NACAD remain unclear. All family members contain an NAC domain and a C-terminal ubiquitin-associated (UBA) domain.
Pssm-ID: 270541 [Multi-domain] Cd Length: 37 Bit Score: 83.83 E-value: 9.83e-20
10 20 30
....*....|....*....|....*....|....*.
gi 163965357 2151 KDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186
Cdd:cd14358 2 KDIELVMQQANVSRAKAVKALKENDNDIVNAIMELT 37
|
|
| UBA_NACAD |
cd14416 |
UBA-like domain found in nascent polypeptide-associated complex subunit alpha ... |
2146-2187 |
5.12e-19 |
|
UBA-like domain found in nascent polypeptide-associated complex subunit alpha domain-containing protein 1 (NACAD); The subfamily includes a group of uncharacterized proteins mainly found in vertebrates. Their biological function remains unknown, but they show high sequence similarity to the nascent polypeptide-associated complex (NAC) subunit alpha (NACA) that exists as part of several protein complexes playing a role in proliferation, apoptosis, or degradation. Like NACA, NACAD contains an NAC domain and a C-terminal ubiquitin-associated (UBA) domain.
Pssm-ID: 270599 Cd Length: 44 Bit Score: 82.05 E-value: 5.12e-19
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 163965357 2146 TGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 2187
Cdd:cd14416 3 TGLEVRDIELVMAQANVSRAKAVRALRHNNNDIVNAIMELTM 44
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1057-1559 |
1.19e-17 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 90.77 E-value: 1.19e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1057 PLKETSKSATPgEKSASSPKRSPKTAGPKETPPGGVTAVPPEISLPPKETPQNATPNESLAASSQkrSPKTSVPKETPPG 1136
Cdd:PHA03247 2554 PLPPAAPPAAP-DRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPL--PPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1137 GVTAMPLEIPSAPQKAPKTAVPKQIPTPedavtilaGSPLSPKKASKTAAPKEAPATPSvgviavsgeiSPSPKKTSKTA 1216
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDDPAP--------GRVSRPRRARRLGRAAQASSPPQ----------RPRRRAARPTV 2692
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1217 APKENSATLPPKrsPKTAAPKETPATSSegvtavpseiSPSPPTPASKGVPVTLTPKG-APNALAESPASPKKVPKTAAP 1295
Cdd:PHA03247 2693 GSLTSLADPPPP--PPTPEPAPHALVSA----------TPLPPGPAAARQASPALPAApAPPAVPAGPATPGGPARPARP 2760
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1296 EETSTTPSPqkipkvAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEiPPSPRKAPKTAAPKETPAPSPEGATTA 1375
Cdd:PHA03247 2761 PTTAGPPAP------APPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPAD-PPAAVLAPAAALPPAASPAGPLPPPTS 2833
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1376 PVQIPPSPRKGSkkagsketPTTPSPEGVTAAPLEiPISSKKTSKMASPKETLVT-PSSKKLSQTVGPKETSlegatavP 1454
Cdd:PHA03247 2834 AQPTAPPPPPGP--------PPPSLPLGGSVAPGG-DVRRRPPSRSPAAKPAAPArPPVRRLARPAVSRSTE-------S 2897
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1455 LEIPPSHKKAPKTVDPKQVPLTPSPKDAPTTLAESPSSPKKAPKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAE 1534
Cdd:PHA03247 2898 FALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRF 2977
|
490 500
....*....|....*....|....*
gi 163965357 1535 TQEVAVSSRETPVTPAVPPVKNPSS 1559
Cdd:PHA03247 2978 RVPQPAPSREAPASSTPPLTGHSLS 3002
|
|
| UBA_NAC_like |
cd14278 |
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and ... |
2151-2186 |
7.69e-15 |
|
UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and similar proteins; The family contains nascent polypeptide-associated complex subunit alpha (NACA), putative NACA-like protein (NACP1), nascent polypeptide-associated complex subunit alpha domain-containing protein 1 (NACAD), and similar proteins found in archaea and bacteria. NACA, also called NAC-alpha or Alpha-NAC, together with BTF3, also called Beta-NAC, form the nascent polypeptide-associated complex (NAC) which is a cytosolic protein chaperone that contacts the nascent polypeptide chains as they emerge from the ribosome. Besides, NACA has a high affinity for nucleic acids and exists as part of several protein complexes playing a role in proliferation, apoptosis, or degradation. It is a cytokine-modulated specific transcript in the human TF-1 erythroleukemic cell line. It also acts as a transcriptional co-activator in osteoblasts by binding to phosphorylated c-Jun, a member of the activator-protein-1 (AP-1) family. Moreover, NACA binds to and regulates the adaptor protein Fas-associated death domain (FADD). In addition, NACA functions as a novel factor participating in the positive regulation of human erythroid-cell differentiation. The biological function of NACP1 (also called Alpha-NAC pseudogene 1 or NAC-alpha pseudogene 1) and NACAD remain unclear. The family also includes huntingtin-interacting protein K (HYPK), also called Huntingtin yeast partner K or Huntingtin yeast two-hybrid protein K. It is an intrinsically unstructured Huntingtin (HTT)-interacting protein with chaperone-like activity. It may be involved in regulating cell growth, cell cycle, unfolded protein response and cell death. All members in this family contain an ubiquitin-associated (UBA) domain.
Pssm-ID: 270464 [Multi-domain] Cd Length: 37 Bit Score: 69.82 E-value: 7.69e-15
10 20 30
....*....|....*....|....*....|....*.
gi 163965357 2151 KDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186
Cdd:cd14278 2 EDIELVMSQTGVSREEAIKALRENKGDVVDAILELT 37
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1218-1696 |
8.83e-13 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 74.59 E-value: 8.83e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1218 PKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPS-PPTPASKGVPVTltPKGAPNALAESPASPkkvPKTAAPE 1296
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDaPPQSARPRAPVD--DRGDPRGPAPPSPLP---PDTHAPD 2625
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1297 ETSTTPSPQkiPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAApketpAPSPEGATTAP 1376
Cdd:PHA03247 2626 PPPPSPSPA--ANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRA-----ARPTVGSLTSL 2698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1377 VQIPPSPRkgskkagskeTPTTPSPEGVTAAPLEIPISSKKTSKMASPKETLVTPSSKKLSQTVGPKETSLEGATAVPLE 1456
Cdd:PHA03247 2699 ADPPPPPP----------TPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPA 2768
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1457 ipPSHKKAPKTVDPKQVPLTPSPKDAPTTLAeSPSSPKKAPKTAAPPSERVTTVPPEKPATP-------QKASATTASKV 1529
Cdd:PHA03247 2769 --PAPPAAPAAGPPRRLTRPAVASLSESRES-LPSPWDPADPPAAVLAPAAALPPAASPAGPlppptsaQPTAPPPPPGP 2845
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1530 PVPAETQEVAVS----------SRETPVTPAVPPvkNPSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSKKAPRTSAPK 1599
Cdd:PHA03247 2846 PPPSLPLGGSVApggdvrrrppSRSPAAKPAAPA--RPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQP 2923
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1600 EFPASPSIKPVTTSLAQtAPPSLQKAPSttipkenlAAPAVLPVSSKSPAAPAAASASLSPATAAPQTAPKEATTIPSCK 1679
Cdd:PHA03247 2924 PPPPQPQPPPPPPPRPQ-PPLAPTTDPA--------GAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTP 2994
|
490
....*....|....*..
gi 163965357 1680 KAAATETPIETSTAPSL 1696
Cdd:PHA03247 2995 PLTGHSLSRVSSWASSL 3011
|
|
| EGD2 |
COG1308 |
Transcription factor homologous to NACalpha-BTF3 [Transcription]; |
2046-2186 |
8.37e-12 |
|
Transcription factor homologous to NACalpha-BTF3 [Transcription];
Pssm-ID: 440919 [Multi-domain] Cd Length: 116 Bit Score: 64.10 E-value: 8.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 2046 KKARKAMSKLGLRQVT-GVTRVTIR-KSKNIlfVITKPDVY--KSPASDTYIVFGEAKIEDLSQQAQlaaaekfkvqgea 2121
Cdd:COG1308 8 RKMKQMMKQMGIKVEEiDAEEVIIRtKDKEI--VFENPQVTvmKAQGQETYQIVGEPEEVEKGAEEA------------- 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 163965357 2122 vsniqentqtptvqeeseeeevdetGVEVK--DIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186
Cdd:COG1308 73 -------------------------EVEIPeeDVELVAEQTGVSEEEAREALEEANGDLAEAILKLE 114
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
762-1251 |
8.29e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 68.04 E-value: 8.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 762 APPSPKGAPIVPTESSIsskqvpaeilPSPQKTPEVTASRLISAVQSPKVDPimSDVTPTSPKKTSATavPKDTSATLSL 841
Cdd:PHA03247 2552 PPPLPPAAPPAAPDRSV----------PPPRPAPRPSEPAVTSRARRPDAPP--QSARPRAPVDDRGD--PRGPAPPSPL 2617
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 842 KSVPAVTSLSPPKAPVAPSNEATIVPTEIPTSLKNALAAATPKETLATSIPKVTSPSPQKTPKSVSLKGAPAMTSKKATE 921
Cdd:PHA03247 2618 PPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTS 2697
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 922 IAASKDVSPSQFPKEVPLLPHVPptSPPKSPVSDTLSGALTSPPPKGPPATLAETPTYPKKSPKPAaskkTPATPSPEGV 1001
Cdd:PHA03247 2698 LADPPPPPPTPEPAPHALVSATP--LPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPP----TTAGPPAPAP 2771
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1002 TAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSKEIPSKGVTAVPLEISLPLKETSKSATPGEKSASSPKRSPKT 1081
Cdd:PHA03247 2772 PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLP 2851
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1082 AGPKETPPGGVTAVPPEISLPPKETPQNATPNESLAASSQKRSPKtsvpketppggvtamPLEIPSAPQKAPKTAVPKQI 1161
Cdd:PHA03247 2852 LGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTE---------------SFALPPDQPERPPQPQAPPP 2916
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1162 PTPEDAvtilAGSPLSPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKTSKTAAPKENSAtlPPKRSPKTAAPKETPA 1241
Cdd:PHA03247 2917 PQPQPQ----PPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAV--PRFRVPQPAPSREAPA 2990
|
490
....*....|
gi 163965357 1242 TSSEGVTAVP 1251
Cdd:PHA03247 2991 SSTPPLTGHS 3000
|
|
| nac |
PRK06369 |
nascent polypeptide-associated complex protein; Reviewed |
2046-2186 |
4.24e-10 |
|
nascent polypeptide-associated complex protein; Reviewed
Pssm-ID: 235786 [Multi-domain] Cd Length: 115 Bit Score: 59.11 E-value: 4.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 2046 KKARKAMSKLGLrQVT--GVTRVTIR-KSKNIlfVITKPDV--YKSPASDTYIVFGEAKIEDLSQQAQLAAAEKfkvqge 2120
Cdd:PRK06369 8 RKMKQMMKQMGI-DVEelDVEEVIIRlKDKEI--VFENPQVtvMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEE------ 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 163965357 2121 avsniqentqtptvqeeseeeevdetgvevkDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186
Cdd:PRK06369 79 -------------------------------DIELVAEQTGVSEEEARKALEEANGDLAEAILKLS 113
|
|
| NAC |
cd21114 |
NAC domain; This family contains the NAC domain, named after the nascent ... |
2060-2102 |
8.31e-10 |
|
NAC domain; This family contains the NAC domain, named after the nascent polypeptide-associated complex (NAC) whose subunits contain NAC domains. In eukaryotes, the NAC complex, which plays an important role in co-translational targeting of nascent polypeptides to endoplasmic reticulum (ER), consists of 2 subunits: NAC alpha and a shortened splice variant of the basal transcription factor 3 (BTF3; also called BTF3b or NAC beta). The full length BTF3a protein excites transcription.
Pssm-ID: 409232 Cd Length: 43 Bit Score: 55.77 E-value: 8.31e-10
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 163965357 2060 VTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIED 2102
Cdd:cd21114 1 IPGIEEVTMVMEDGSVIVFTMPKVQASLASNVFVVTGEATREQ 43
|
|
| UBA_AeNAC |
cd14359 |
UBA-like domain found in archaeal nascent polypeptide-associated complex homolog from ... |
2152-2186 |
3.89e-09 |
|
UBA-like domain found in archaeal nascent polypeptide-associated complex homolog from Methanothermobacter marburgensis (AeNAC) and similar proteins; AeNAC is a functional archaeal homolog of eukaryotic nascent polypeptide-associated complex (NAC). Both AeNAC and eukaryotic NAC function as the cytosolic chaperone that can bind to ribosomal RNA, interact with the nascent polypeptide chains as they emerge from the ribosome, and assist in post-translational processes. They all contain a NAC domain and an ubiquitin-associated (UBA) domain in the C-terminus. However, unlike eukaryotic NAC, AeNAC forms a ribosome associated homodimer, but not heterodimer. The NAC domain of AeNAC is responsible for the homodimer formation.
Pssm-ID: 270542 [Multi-domain] Cd Length: 40 Bit Score: 53.77 E-value: 3.89e-09
10 20 30
....*....|....*....|....*....|....*
gi 163965357 2152 DIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186
Cdd:cd14359 6 DIELVMEQTGVSREEARKALEESGGDLAEAILKLT 40
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1487-1991 |
2.72e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.57 E-value: 2.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1487 AESPSSPKKAPK-TAAPPSERVTTVPPEKPATPQKASATTASKVPVPAET-----QEVAVSSRETPvTPAVPPVKNPSSH 1560
Cdd:PHA03247 2486 ARFPFAAGAAPDpGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTwirglEELASDDAGDP-PPPLPPAAPPAAP 2564
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1561 KKTSKTIElkeaPATLPPSPT-----KSPKIPSSKKAPRTSA--PKEFPASPSIKPVTTSLAQTAPPSLQKAPSTTIPKE 1633
Cdd:PHA03247 2565 DRSVPPPR----PAPRPSEPAvtsraRRPDAPPQSARPRAPVddRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDP 2640
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1634 NLAAPAVLPVSSKSPAAPAAASASLSPATAAPQTAPKEATTIPSCKKAAATETPIETSTAPSLEGAPKETSETSVSkvlm 1713
Cdd:PHA03247 2641 HPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALV---- 2716
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1714 ssppkkassskraSTLPATTLPSLKEASVLSPTATSSGKDSHISPVSDACSTGTTTPQASEKLPSKKGPtaftemlAAPA 1793
Cdd:PHA03247 2717 -------------SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPP-------AAPA 2776
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1794 PESALAITAPIQKSPGANSNSASSPKCPDPSSKKDTKGLPSAVALAPQTVPVEKDTSkaieTLLVSPAKGSDCLHSPKGP 1873
Cdd:PHA03247 2777 AGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTS----AQPTAPPPPPGPPPPSLPL 2852
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1874 VGSQVatPLAAFTSDKVPPEAVSASVAPKPAPAASLTLAPSPVAPLPPKQPLLESAPGSVLESPSKlPVPAEEDELPPLI 1953
Cdd:PHA03247 2853 GGSVA--PGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPP-PQPQPQPPPPPQP 2929
|
490 500 510
....*....|....*....|....*....|....*...
gi 163965357 1954 PPEAVSGGEPFQPIlvnMPAPKPAGTPAPAPSAKQPVL 1991
Cdd:PHA03247 2930 QPPPPPPPRPQPPL---APTTDPAGAGEPSGAVPQPWL 2964
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1147-1403 |
5.16e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 58.32 E-value: 5.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1147 SAPQKAPKTAVPKQIPTPEDAVTILAGSPLSPKKASKTAAPKEAPATPSVGVIAVSGEISP---SPKKTSKTAAPKENSA 1223
Cdd:PRK07003 366 GAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPpaaPAPPATADRGDDAADG 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1224 TLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPS 1303
Cdd:PRK07003 446 DAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAA 525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1304 PQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAvpleipPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSP 1383
Cdd:PRK07003 526 APPAPEARPPTPAAAAPAARAGGAAAALDVLRNAGMRVSS------DRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTP 599
|
250 260
....*....|....*....|
gi 163965357 1384 RKGSKKAGSKETPTTPSPEG 1403
Cdd:PRK07003 600 RARAATGDAPPNGAARAEQA 619
|
|
| HYPK_UBA |
pfam19026 |
HYPK UBA domain; This entry represents the UBA domain found at the C-terminus of the HYPK ... |
2146-2186 |
7.40e-08 |
|
HYPK UBA domain; This entry represents the UBA domain found at the C-terminus of the HYPK protein and its homologs. This domain in HYPK mediates a protein interaction with the Naa15 C-terminus.
Pssm-ID: 436907 Cd Length: 41 Bit Score: 50.25 E-value: 7.40e-08
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 163965357 2146 TGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186
Cdd:pfam19026 1 VKVKKEDVELIMTELEVSKAKAERALREHGGDVVAALRALL 41
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1043-1432 |
1.79e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 56.72 E-value: 1.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1043 PSKGVTAVPLEISLPLKETSKSATPGEKSASSPKRSPKTAGPKETPPGGVTAVPPEISLPPKETPQNATPNeslAASSQK 1122
Cdd:PHA03307 63 DRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPD---LSEMLR 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1123 RSPKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAVPkqIPTPEDAVTilAGSPLSPKKASKTAAPKEAPATPSVGVIAVS 1202
Cdd:PHA03307 140 PVGSPGPPPAASPPAAGASPAAVASDAASSRQAALP--LSSPEETAR--APSSPPAEPPPSTPPAAASPRPPRRSSPISA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1203 GEISPSPKKTSKTAAPKENSAtlppkrSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPnalAES 1282
Cdd:PHA03307 216 SASSPAPAPGRSAADDAGASS------SDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPG---PAS 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1283 PASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPK 1362
Cdd:PHA03307 287 SSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPR 366
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1363 ETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTAAPLEIPISSKKTSKMASPKETLVTPS 1432
Cdd:PHA03307 367 KRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPS 436
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1318-1547 |
2.67e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.04 E-value: 2.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1318 ATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGS-KETP 1396
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGaPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1397 TTPSPEGVTAAPLEIPISSKKTSKMASPKETLVTPSSKKLSQTVGPKETSLEGATAVPLEIPPSHKKAPKTVDPKQVPLT 1476
Cdd:PRK12323 452 PAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPAT 531
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 163965357 1477 PSPKDAPTTLAESPSSPkKAPKTAAPPSERVTTVPPEKPATPQKASATT-----ASKVPVPAETQEVAVSSRETPV 1547
Cdd:PRK12323 532 ADPDDAFETLAPAPAAA-PAPRAAAATEPVVAPRPPRASASGLPDMFDGdwpalAARLPVRGLAQQLARQSELAGV 606
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
1186-1391 |
4.97e-07 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 55.43 E-value: 4.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1186 APKEAPATPSVGVIAVSGEISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPspptpaskg 1265
Cdd:PRK10811 863 EVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITE--------- 933
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1266 vpvTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPspqkIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVP 1345
Cdd:PRK10811 934 ---SDVAVAQEVAEHAEPVVEPQDETADIEEAAETAE----VVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 163965357 1346 LEIPPSPRKApktAAPKeTPAPSPEGATTAPV----QIPPSPRKGSKKAG 1391
Cdd:PRK10811 1007 PEATVEHNHA---TAPM-TRAPAPEYVPEAPRhsdwQRPTFAFEGKGAAG 1052
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1251-1892 |
6.94e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.94 E-value: 6.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1251 PSEISPSPPTPASKgvpvtltPKGAPNALAESPASPKKVPKTAAPEETSTTP-SPQKIPKVAGPKEASATPPSKKTPKTA 1329
Cdd:PHA03247 2484 AEARFPFAAGAAPD-------PGGGGPPDPDAPPAPSRLAPAILPDEPVGEPvHPRMLTWIRGLEELASDDAGDPPPPLP 2556
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1330 VPKETSAPSEGVtavpleipPSPRKAPKtaaPKETPAPSPEGATTAPVQiPPSPRKGSKKAGSKETPTTPSPEGVTAAPL 1409
Cdd:PHA03247 2557 PAAPPAAPDRSV--------PPPRPAPR---PSEPAVTSRARRPDAPPQ-SARPRAPVDDRGDPRGPAPPSPLPPDTHAP 2624
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1410 EIPISSkktskmaspketlvtpsskklsqtvgpketslegatavpleiPPSHKKAPKTVDPKQVPLTPSPKDAPTTLAES 1489
Cdd:PHA03247 2625 DPPPPS------------------------------------------PSPAANEPDPHPPPTVPPPERPRDDPAPGRVS 2662
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1490 PssPKKAPKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPaetQEVAVSSRETPVTPAVPPVKNPSSHKKTSktiel 1569
Cdd:PHA03247 2663 R--PRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPP---PPPTPEPAPHALVSATPLPPGPAAARQAS----- 2732
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1570 keAPATLPPSPTKSPKIPSSKKAPRTSAPKEFPASPSIKPVTTSLAQTAPPSLQKAPSTTIPKENLAAPAvlpvsskspa 1649
Cdd:PHA03247 2733 --PALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS---------- 2800
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1650 apaaasasLSPATAAPQTAPKEATTIPSCKKAAATETPIETS--TAPSLEGAPKETSETSVSKVLMSSPPKKASSSKRAS 1727
Cdd:PHA03247 2801 --------PWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAqpTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1728 TLPATtlPSLKEASVLSPTATSSGKDSHISPVSDAcstgTTTPQASEKLPSKKGPTAFTEMLAAPAPESALAITAPIQKS 1807
Cdd:PHA03247 2873 AKPAA--PARPPVRRLARPAVSRSTESFALPPDQP----ERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPT 2946
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1808 PGANSNSASSPKCPDPSSKkdtkglpsavALAPQTVPVEKDTSKAIETLLVSPAKGSDCLHSPKGPVGSQVATPLAAFTS 1887
Cdd:PHA03247 2947 TDPAGAGEPSGAVPQPWLG----------ALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEE 3016
|
....*
gi 163965357 1888 DKVPP 1892
Cdd:PHA03247 3017 TDPPP 3021
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1490-1955 |
1.06e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.56 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1490 PSSPKKAPKTAAPPSErvttvPPEKPATPQKASATTASKVPVPAETQEVAVSSRETPVTPAVPPVKNPSSHKKtsktiel 1569
Cdd:PHA03247 2557 PAAPPAAPDRSVPPPR-----PAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAP------- 2624
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1570 kEAPATLPPSPTKSPKIPSSKKAPRTSAPKEFPASPSIKPVTTSLAQTAPPSLQKAPSTtiPKENLAAPAVLPVSSKSPA 1649
Cdd:PHA03247 2625 -DPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQR--PRRRAARPTVGSLTSLADP 2701
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1650 APAAASASLSPATAAPQTAPKEATTIPSCKKAAATETPI--ETSTAPSLEGAPKETSETSVSKVLMSSPPKKASSSKRAS 1727
Cdd:PHA03247 2702 PPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAppAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR 2781
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1728 TLPATTLPSLKEASVLSPTATSSGKDSHISPVSDACSTGTTTPQASEKLPSKKGPTAftEMLAAPAPESALAITAPIqkS 1807
Cdd:PHA03247 2782 RLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTA--PPPPPGPPPPSLPLGGSV--A 2857
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1808 PGAnsnsasspkcpdPSSKKDTKGLPSAVALAPQTVPVEKDTSKAIETLLVSPAKGSDCLHSPKGPVGSQVATPLAAFTS 1887
Cdd:PHA03247 2858 PGG------------DVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPP 2925
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 163965357 1888 DKVPPEAVSASVAPKPAPAASLTLAPSPVA-PLPPKQPLLESAPGSVLESPSKLPVPAEEDELPPLIPP 1955
Cdd:PHA03247 2926 PPQPQPPPPPPPRPQPPLAPTTDPAGAGEPsGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTP 2994
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1181-1369 |
1.40e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 53.73 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1181 ASKTAAPKEAPATPSVGVIAVSGEISP---SPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPS 1257
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAppaAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1258 PPTPASKGVPVTLTPKGAPNALAESPASPKKVPkTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAP 1337
Cdd:PRK12323 455 AAAPAAAARPAAAGPRPVAAAAAAAPARAAPAA-APAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATAD 533
|
170 180 190
....*....|....*....|....*....|..
gi 163965357 1338 SEGVTAVPLEIPPSPRKAPKTAAPKETPAPSP 1369
Cdd:PRK12323 534 PDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
944-1265 |
1.75e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.64 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 944 PPTSPPKSPVSDTLSGALTSPPPkGPPATLAETPTYPKKSPKPAASKKTPATPSpegvTAVPLEIPPCSKKAPKTAAPKE 1023
Cdd:PHA03307 67 PPTGPPPGPGTEAPANESRSTPT-WSLSTLAPASPAREGSPTPPGPSSPDPPPP----TPPPASPPPSPAPDLSEMLRPV 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1024 SSATSSSKRAPKTAVSKEIPSKGVTAVPLEISLPLKETSKSA-TPGEKSASSPKRSPKTAGPKETPPGGVTAVPPEIS-- 1100
Cdd:PHA03307 142 GSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETArAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSpa 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1101 -LPPKETPQNATPNESLAASSQKRSPKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAVPKQIPTPEDAVTILAGSPLSPK 1179
Cdd:PHA03307 222 pAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1180 KASKTAAPKEAPATPSVGVIAVSGeiSPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPP 1259
Cdd:PHA03307 302 SPGSGPAPSSPRASSSSSSSRESS--SSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPA 379
|
....*.
gi 163965357 1260 TPASKG 1265
Cdd:PHA03307 380 ASAGRP 385
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1247-1643 |
2.48e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 53.07 E-value: 2.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1247 VTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTP 1326
Cdd:PRK07764 378 LERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPP 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1327 KTAVPKETSAPSEGVTAVPLEIPPSPrkAPKTAAPKETPAPSPEGATTAPVQIPPSPR----------KGSKKAGSKETP 1396
Cdd:PRK07764 458 PAAAPSAQPAPAPAAAPEPTAAPAPA--PPAAPAPAAAPAAPAAPAAPAGADDAATLRerwpeilaavPKRSRKTWAILL 535
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1397 TTPSPEGVTAAPLEIPISSKKTSKM-ASPK--ETLVTPSSKKLSQTVG--------PKETSLEGATAVPLEIPPSHKKAP 1465
Cdd:PRK07764 536 PEATVLGVRGDTLVLGFSTGGLARRfASPGnaEVLVTALAEELGGDWQveavvgpaPGAAGGEGPPAPASSGPPEEAARP 615
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1466 KTVDPKQVPLTPSPKDAPTTLAESPSSPKKAPKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAETQEVAvssret 1545
Cdd:PRK07764 616 AAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAA------ 689
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1546 PVTPAVPPVKNPSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSKKAPRTSAPKEFPASPSIKPVTTSLAQTAPPSLQKA 1625
Cdd:PRK07764 690 PAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAA 769
|
410
....*....|....*...
gi 163965357 1626 PSTTIPKENLAAPAVLPV 1643
Cdd:PRK07764 770 PAAAPPPSPPSEEEEMAE 787
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1136-1377 |
3.20e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.57 E-value: 3.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1136 GGVTAMPLEIPSAPQKAPKTAVPKQIPTPEDAVTILAGSPLSPKKASKTAAPKEAPATPSVGVIAVsgeispspkktskt 1215
Cdd:PRK12323 368 SGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAL-------------- 433
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1216 AAPKENSATLPPKRSPKTAAPKETPATssegvTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKT-AA 1294
Cdd:PRK12323 434 AAARQASARGPGGAPAPAPAPAAAPAA-----AARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEfAS 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1295 PEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEiPPSPRKAPKTAAPKETPAPSPEGATT 1374
Cdd:PRK12323 509 PAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVV-APRPPRASASGLPDMFDGDWPALAAR 587
|
...
gi 163965357 1375 APV 1377
Cdd:PRK12323 588 LPV 590
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1190-1386 |
3.92e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.19 E-value: 3.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1190 APATPSVGVIAVSGEISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVT 1269
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1270 LTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGV-TAVPLEI 1348
Cdd:PRK12323 453 APAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAEsIPDPATA 532
|
170 180 190
....*....|....*....|....*....|....*...
gi 163965357 1349 PPSPRKAPKTAAPKETPAPSPEgATTAPVQIPPSPRKG 1386
Cdd:PRK12323 533 DPDDAFETLAPAPAAAPAPRAA-AATEPVVAPRPPRAS 569
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1230-1594 |
5.00e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 52.00 E-value: 5.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1230 SPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALA-ESPASPKKVPKTAAPEETSTTPSPqKIP 1308
Cdd:PTZ00449 537 SKESDEPKEGGKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKPEFPKDPKHpKDPEEPKKPKRPRSAQRPTRPKSP-KLP 615
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1309 KVAGPKEASATPPSKKTPKTAV-PKETSAPS--EGVTAVPLEIPPSPRKAP---------------KTAAPKE--TPAPS 1368
Cdd:PTZ00449 616 ELLDIPKSPKRPESPKSPKRPPpPQRPSSPErpEGPKIIKSPKPPKSPKPPfdpkfkekfyddyldAAAKSKEtkTTVVL 695
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1369 PEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTAAPLEIPisskkTSKMASPKETLVTPSSKKLSQTVGPKETSLE 1448
Cdd:PTZ00449 696 DESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGDP-----DAEQPDDIEFFTPPEEERTFFHETPADTPLP 770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1449 GATAVPLEIPPSHKKAPKTVDPKQVPLTPSpKDAPTTLAESPSSPKK-------APKTAAPPSE--RVTTVPPEKPATPQ 1519
Cdd:PTZ00449 771 DILAEEFKEEDIHAETGEPDEAMKRPDSPS-EHEDKPPGDHPSLPKKrhrldglALSTTDLESDagRIAKDASGKIVKLK 849
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 163965357 1520 KASatTASKVPVPAETQEVAVSSRETPVTPAVPPVKNPSSHKktSKTIELKEAPATLPPSPTKSPKIPSSKKAPR 1594
Cdd:PTZ00449 850 RSK--SFDDLTTVEEAEEMGAEARKIVVDDDGTEADDEDTHP--PEEKHKSEVRRRRPPKKPSKPKKPSKPKKPK 920
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
1231-1605 |
5.06e-06 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.08 E-value: 5.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1231 PKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSP----QK 1306
Cdd:pfam03154 172 PVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPhpplQP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1307 IPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPaPSPEGATTAPVQ----IPPS 1382
Cdd:pfam03154 252 MTQPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVP-PGPSPAAPGQSQqrihTPPS 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1383 PRKGSKKAGSKETPTTPSPEGV--TAAPLEIPISSKKTSKMASPKETLVTPSSKKLSQTVgPKETSLEGATAVPLEIPPS 1460
Cdd:pfam03154 331 QSQLQSQQPPREQPLPPAPLSMphIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNL-PPPPALKPLSSLSTHHPPS 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1461 HKKAPKTVDPKQVPLTPSPKDAPTtLAESPSSPkkAPKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPaetqevav 1540
Cdd:pfam03154 410 AHPPPLQLMPQSQQLPPPPAQPPV-LTQSQSLP--PPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPP-------- 478
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 163965357 1541 SSRETPVTPAVPPVKNPSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSKKAPRTSAPKEFPASP 1605
Cdd:pfam03154 479 SGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPE 543
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
255-689 |
6.31e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.86 E-value: 6.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 255 PVSPPARNTaaPSIPLAPSTSLGCHLPLLHHSSVDSPIQPPGQSGlaVSNPTSVGHSGIAASCPPERCVVPALPSRLLAV 334
Cdd:PHA03247 2589 PDAPPQSAR--PRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSP--SPAANEPDPHPPPTVPPPERPRDDPAPGRVSRP 2664
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 335 DSGAAPSDDKGSSAVTNELCSPPGSSNVAGTSLSPKASLVPKGSNVALQPLVTQVPASQKT--GLKEIPVSCIGATHHAL 412
Cdd:PHA03247 2665 RRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPaaARQASPALPAAPAPPAV 2744
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 413 DNPSAISVAPATHVPPPTSSGLVSSKDPASPVTslvvPAAHKQFPAPPASATLGVPVSPLPATEGLKNLPISALVNVGAP 492
Cdd:PHA03247 2745 PAGPATPGGPARPARPPTTAGPPAPAPPAAPAA----GPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPP 2820
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 493 VSPAQAGLPTrkDTTLQPLAPIALKESPSSQSASSLEVLSEDTVTKKTTGGPAPVVRPAIAgvatttslradSPPAVIRA 572
Cdd:PHA03247 2821 AASPAGPLPP--PTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPA-----------RPPVRRLA 2887
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 573 DSCVSPNTVSQPL-----KRSVTDPAMAPRTAKNTAPSTTSPLVPLASEGCPVASSMALSPQNASVSETALALSPEIPKS 647
Cdd:PHA03247 2888 RPAVSRSTESFALppdqpERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAL 2967
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 163965357 648 VPFPDPPLAEISFSNARKVDAVshmESSGSSRQGHPDASVTA 689
Cdd:PHA03247 2968 VPGRVAVPRFRVPQPAPSREAP---ASSTPPLTGHSLSRVSS 3006
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1015-1401 |
6.36e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.71 E-value: 6.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1015 APKTAAPKESSATSSSKRAPKTAVSKEIPSKGVTAVPLEISLPLKETSKSAT--PGEKSASSPKRSPKTAGPKETPPGGV 1092
Cdd:PHA03307 52 AVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREgsPTPPGPSSPDPPPPTPPPASPPPSPA 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1093 TAVPPEISLPPKETPQNATPNESLAASSqkrspkTSVPKETPPGGVTAMPLEIPSAPQKAPKTavPKQIPTPEDAVTILA 1172
Cdd:PHA03307 132 PDLSEMLRPVGSPGPPPAASPPAAGASP------AAVASDAASSRQAALPLSSPEETARAPSS--PPAEPPPSTPPAAAS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1173 GSPLSPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPS 1252
Cdd:PHA03307 204 PRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPG 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1253 EISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPK 1332
Cdd:PHA03307 284 PASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPS 363
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 163965357 1333 ETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSP 1401
Cdd:PHA03307 364 SPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPL 432
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
986-1414 |
7.26e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.53 E-value: 7.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 986 PAASKKTPATPSPEGVTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSKEIPSKGVTAVPLEISLPLKETSKSA 1065
Cdd:PRK07764 387 VAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQP 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1066 TPGEKSASSPKRSPKTAGPKETPPGGVTAVPPEISLPPKETPqNATPNES---LAASSQKRSPKTSVPKETppgGVTAMP 1142
Cdd:PRK07764 467 APAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADD-AATLRERwpeILAAVPKRSRKTWAILLP---EATVLG 542
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1143 LEIPSAPQKAPKTAVPKQIPTPEDA---VTILAgsplspKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKTSKTAAPK 1219
Cdd:PRK07764 543 VRGDTLVLGFSTGGLARRFASPGNAevlVTALA------EELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPA 616
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1220 ENSATLPPKRspktAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETS 1299
Cdd:PRK07764 617 APAAPAAPAA----PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAA 692
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1300 TTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQI 1379
Cdd:PRK07764 693 PAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAA 772
|
410 420 430
....*....|....*....|....*....|....*
gi 163965357 1380 PPSPRKGSKKAGSKETPTTPSPEGVTAAPLEIPIS 1414
Cdd:PRK07764 773 APPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAME 807
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
1280-1547 |
1.21e-05 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 51.02 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1280 AESPASPKKVPKTAAPEETSTTPSPQKipkvAGPKEASAtppsKKTPKTAVPKETSAPSEGVTA-----VPLEIPPSPRK 1354
Cdd:PLN03237 1173 AKAEEAREKLQRAAARGESGAAKKVSR----QAPKKPAP----KKTTKKASESETTEETYGSSAmetenVAEVVKPKGRA 1244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1355 APKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTT--------PSPEGVTAAPLEIPISSKKTSKMASPKE 1426
Cdd:PLN03237 1245 GAKKKAPAAAKEKEEEDEILDLKDRLAAYNLDSAPAQSAKMEETvkavparrAAARKKPLASVSVISDSDDDDDDFAVEV 1324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1427 TLVTPSSKKlsqtVGPKetslEGATAVPLEIPPS--HKKAPKTVDPKQVPLTPSPKDAPttlaESPSSPKKAP-KTAAPP 1503
Cdd:PLN03237 1325 SLAERLKKK----GGRK----PAAANKKAAKPPAaaKKRGPATVQSGQKLLTEMLKPAE----AIGISPEKKVrKMRASP 1392
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 163965357 1504 SERVTTVPPEKPATPQKASATTASKVPVPAETQEVAVSSRETPV 1547
Cdd:PLN03237 1393 FNKKSGSVLGRAATNKETESSENVSGSSSSEKDEIDVSAKPRPQ 1436
|
|
| TIGR00264 |
TIGR00264 |
alpha-NAC-related protein; This hypothetical protein is found so far only in the Archaea. Its ... |
2043-2185 |
1.31e-05 |
|
alpha-NAC-related protein; This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator. [Unknown function, General]
Pssm-ID: 272988 [Multi-domain] Cd Length: 116 Bit Score: 46.48 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 2043 RSEKKARKAMSKLGLR-QVTGVTRVTIR-KSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLsqqaqlaaaekfkvqgE 2120
Cdd:TIGR00264 9 KMLKQMQKMMKQMGMEmEDLDVEEVIIVfDDEEWIFENPKVQVMDILGVKTYQITGKPKKEKV----------------E 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 163965357 2121 AVSNIQENtqtptvqeeseeeevdetgvevkDIELVMSQANVSRAKAVRALKNNSNDIVNAIMEL 2185
Cdd:TIGR00264 73 EEEEITED-----------------------DIELVMKQCNVSKEEARRALEECGGDLAEAIMKL 114
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
899-1338 |
1.51e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 50.46 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 899 PQKTPKSVSLkgAPAMTSKKATEIAASKDVSPSQFPKEvpllpHVPPTSPPKSPVSDTLSGALTSPPPKGPpaTLAETPT 978
Cdd:PTZ00449 510 PPEGPEASGL--PPKAPGDKEGEEGEHEDSKESDEPKE-----GGKPGETKEGEVGKKPGPAKEHKPSKIP--TLSKKPE 580
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 979 YPK--KSPKPAASKKTPATP-SPEGVTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSKEIPSkgvtavpleis 1055
Cdd:PTZ00449 581 FPKdpKHPKDPEEPKKPKRPrSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPE----------- 649
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1056 lplketsksatpGEKSASSPKrSPKTagpketppggvtavpPEISLPPKeTPQNATPNESLAASSQKRSPKTSVPKETPP 1135
Cdd:PTZ00449 650 ------------GPKIIKSPK-PPKS---------------PKPPFDPK-FKEKFYDDYLDAAAKSKETKTTVVLDESFE 700
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1136 GGVTAMPLEIPSAPQKAPKtAVPKQIPTPEDAVTILAGSPLSPKKA---------SKTAAPKEAPA-TPSVGVIAvsgEI 1205
Cdd:PTZ00449 701 SILKETLPETPGTPFTTPR-PLPPKLPRDEEFPFEPIGDPDAEQPDdiefftppeEERTFFHETPAdTPLPDILA---EE 776
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1206 SPSPKKTSKTAAPKE--NSATLPPKRSPKT-----AAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNA 1278
Cdd:PTZ00449 777 FKEEDIHAETGEPDEamKRPDSPSEHEDKPpgdhpSLPKKRHRLDGLALSTTDLESDAGRIAKDASGKIVKLKRSKSFDD 856
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 163965357 1279 LAESPASPKKVPK----------TAAPEETSTTPSPQKIPKV---AGPKEASATPPSKKTPKTAVPKETSAPS 1338
Cdd:PTZ00449 857 LTTVEEAEEMGAEarkivvdddgTEADDEDTHPPEEKHKSEVrrrRPPKKPSKPKKPSKPKKPKKPDSAFIPS 929
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
1210-1492 |
1.54e-05 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 50.63 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1210 KKTSKTAAPKENSatlppKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTpasKGVPVTLTPKGAPNALAESPASPKKV 1289
Cdd:PLN03237 1186 AARGESGAAKKVS-----RQAPKKPAPKKTTKKASESETTEETYGSSAMET---ENVAEVVKPKGRAGAKKKAPAAAKEK 1257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1290 PK----------------TAAPEETSTTPSPQKipkvAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPR 1353
Cdd:PLN03237 1258 EEedeildlkdrlaaynlDSAPAQSAKMEETVK----AVPARRAAARKKPLASVSVISDSDDDDDDFAVEVSLAERLKKK 1333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1354 KAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEgvtaapleipissKKTSKMASpketlvTPSS 1433
Cdd:PLN03237 1334 GGRKPAAANKKAAKPPAAAKKRGPATVQSGQKLLTEMLKPAEAIGISPE-------------KKVRKMRA------SPFN 1394
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 163965357 1434 KKLSQTVGPKETSLEGATAVPLEIPPSHKKAPKTVDPKQVPLTPSPKDAPTTLAESPSS 1492
Cdd:PLN03237 1395 KKSGSVLGRAATNKETESSENVSGSSSSEKDEIDVSAKPRPQRANRKQTTYVLSDSESE 1453
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1271-1459 |
1.85e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.87 E-value: 1.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1271 TPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTP-KTAVPKETSAPSEGVTAVPlEIP 1349
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPaPEALAAARQASARGPGGAP-APA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1350 PSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTA-APLEIPISSKKTSKMASPKETL 1428
Cdd:PRK12323 452 PAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASpAPAQPDAAPAGWVAESIPDPAT 531
|
170 180 190
....*....|....*....|....*....|.
gi 163965357 1429 VTPSSKKLSQTVGPKETSLEGATAVPLEIPP 1459
Cdd:PRK12323 532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVA 562
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
1213-1431 |
2.21e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 49.54 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1213 SKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKT 1292
Cdd:PLN03209 325 SQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTPPSSSPASSKSVDAV 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1293 AAPEETSTTPSPQKIPKVAGPKEASA-----------------TPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKA 1355
Cdd:PLN03209 405 AKPAEPDVVPSPGSASNVPEVEPAQVeakktrplspyaryedlKPPTSPSPTAPTGVSPSVSSTSSVPAVPDTAPATAAT 484
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 163965357 1356 PKTAAPKETPAPSPEGATTAPVQIPPSPrkgSKKAGSKETPTTPSPEGVTAAPLEIPISSKKTSKMASPKETLVTP 1431
Cdd:PLN03209 485 DAAAPPPANMRPLSPYAVYDDLKPPTSP---SPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSP 557
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1127-1321 |
2.98e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.10 E-value: 2.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1127 TSVPKETPPGGVTAMPLEIPSAPQKAPKTAVPKQIPTPEDAVTILAGSPLSPKKASKTAAPKEAPATPSvgviAVSGEIS 1206
Cdd:PRK12323 384 QPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP----APAAAPA 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1207 PSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSS--EGVTAVPSEISPSPPTPASKGVPVTLTPKGApNALAESPA 1284
Cdd:PRK12323 460 AAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPpwEELPPEFASPAPAQPDAAPAGWVAESIPDPA-TADPDDAF 538
|
170 180 190
....*....|....*....|....*....|....*..
gi 163965357 1285 SPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPP 1321
Cdd:PRK12323 539 ETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPD 575
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1215-1643 |
3.18e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.40 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1215 TAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGvPVTLTPKGAPNALAESPASPKKV--PKT 1292
Cdd:PHA03307 24 PPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPG-PGTEAPANESRSTPTWSLSTLAPasPAR 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1293 AAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGA 1372
Cdd:PHA03307 103 EGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEET 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1373 TTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTAAPLEIPISSKKTSKMASPKETLVTPSSKKLSQTVGPKETSLEGATA 1452
Cdd:PHA03307 183 ARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAP 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1453 VPLEIPPSHKKAPKTVDPKQVPLTPSPKDAPTTLAESPSSPKKAPKTAAPPServttVPPEKPATPQKASATTASKvpvp 1532
Cdd:PHA03307 263 ITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRA-----SSSSSSSRESSSSSTSSSS---- 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1533 aetqevavssrETPVTPAVPPVKNPSSHKKTSKTielkeAPATLPPSPTKSPKIPSSKKAPRTSAPKEFPASPSIKPVTT 1612
Cdd:PHA03307 334 -----------ESSRGAAVSPGPSPSRSPSPSRP-----PPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGR 397
|
410 420 430
....*....|....*....|....*....|.
gi 163965357 1613 SLAQTAPPSLQKAPSTTIPKENLAAPAVLPV 1643
Cdd:PHA03307 398 ARRRDATGRFPAGRPRPSPLDAGAASGAFYA 428
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1209-1408 |
4.15e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 48.72 E-value: 4.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1209 PKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKK 1288
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGP 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1289 VPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSkkTPKTAVPKETSAPSEGVTAVPLEIP---PSPRKAPKTAAPKETP 1365
Cdd:PRK12323 445 GGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAA--APARAAPAAAPAPADDDPPPWEELPpefASPAPAQPDAAPAGWV 522
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 163965357 1366 APSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTAAP 1408
Cdd:PRK12323 523 AESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1251-1403 |
4.19e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.56 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1251 PSEISPSPPTPASKgvPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQkipkvagpkeASATPPSKKTPKTAV 1330
Cdd:PRK14951 366 PAAAAEAAAPAEKK--TPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPP----------AAAPPAPVAAPAAAA 433
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 163965357 1331 PkeTSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPrkgskkagskETPTTPSPEG 1403
Cdd:PRK14951 434 P--AAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPA----------AARLTPTEEG 494
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
1177-1595 |
4.74e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 48.61 E-value: 4.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1177 SPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISP 1256
Cdd:pfam03154 158 SDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTL 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1257 SPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPeetsttpsPQKIPKVAGPKEASATPPSKKTPKTAVPKETSA 1336
Cdd:pfam03154 238 HPQRLPSPHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMP--------PMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQV 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1337 PsegvtavpleIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTAAPLEIPISSK 1416
Cdd:pfam03154 310 P----------PGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLS 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1417 KTSKMASPKETLVTPSSKKLSqtvgpketslegatAVPLEIPPSHKKAPKTVDPKQVPLTPSPKDAPtTLAESPSSPkkA 1496
Cdd:pfam03154 380 GPSPFQMNSNLPPPPALKPLS--------------SLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPP-VLTQSQSLP--P 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1497 PKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAETQEVAVSSRETPVTPAVPPVKN----PSSHKKTSKTIELKEA 1572
Cdd:pfam03154 443 PAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPPSSASVSSsgpvPAAVSCPLPPVQIKEE 522
|
410 420
....*....|....*....|...
gi 163965357 1573 PATLPPSPTKSPKIPSSKKAPRT 1595
Cdd:pfam03154 523 ALDEAEEPESPPPPPRSPSPEPT 545
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1489-1684 |
8.33e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.95 E-value: 8.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1489 SPSSPKKAPKTAAPPSERVTTVPPEKPATPQKASAttASKVPVPAETQEVAVSSRETPVTPAVPPVKNPSSHKKTSKTie 1568
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPA--AAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAP-- 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1569 lkeAPATLP---PSPTKSPKIPSSKKAPRTSAPKEFPASPSIKPVTTSLAQTAPPSLQKAPSTTIPKENLAAPAVLPVSS 1645
Cdd:PRK12323 449 ---APAPAPaaaPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAES 525
|
170 180 190
....*....|....*....|....*....|....*....
gi 163965357 1646 KSPAAPAAASASLSPATAAPQTAPKEATTIPSCKKAAAT 1684
Cdd:PRK12323 526 IPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPR 564
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1449-1638 |
9.38e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.56 E-value: 9.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1449 GATAVPLEIPPSHKKAPKTVDPKqvPLTPSPKDAPTTLAESPSSPKKAPKTAAPPSERVTTVPPEKPATPQKASATTASK 1528
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPA--AAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1529 VPVPAETQEVAVSSRETPVTPAVPPVKNPSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSKKAPRTSAPKEFPASPSIK 1608
Cdd:PRK12323 449 APAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPD 528
|
170 180 190
....*....|....*....|....*....|....*
gi 163965357 1609 PVTTSL-----AQTAPPSLQKAPSTTIPKENLAAP 1638
Cdd:PRK12323 529 PATADPddafeTLAPAPAAAPAPRAAAATEPVVAP 563
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
1171-1362 |
9.81e-05 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 47.73 E-value: 9.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1171 LAGSPLSPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKTSKTAAPKENSA----TLPPKRSPKTAAPKETPATSSEG 1246
Cdd:PTZ00108 1169 LRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSgsdqEDDEEQKTKPKKSSVKRLKSKKN 1248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1247 VTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTaaPEETSTTPSPQKIPKVAGPKEASATPPSKKTP 1326
Cdd:PTZ00108 1249 NSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDG--ESNGGSKPSSPTKKKVKKRLEGSLAALKKKKK 1326
|
170 180 190
....*....|....*....|....*....|....*.
gi 163965357 1327 ktavPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPK 1362
Cdd:PTZ00108 1327 ----SEKKTARKKKSKTRVKQASASQSSRLLRRPRK 1358
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
1294-1368 |
1.25e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 47.25 E-value: 1.25e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 163965357 1294 APEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTavPLEIPPSPRKAPKTAAPKETPAPS 1368
Cdd:PRK14954 381 APSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSPASAPT--PEQQPPVARSAPLPPSPQASAPRN 453
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
1235-1408 |
1.41e-04 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 47.34 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1235 APKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPK 1314
Cdd:PRK10811 863 EVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAVAQEV 942
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1315 EASATP--PSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSkkags 1392
Cdd:PRK10811 943 AEHAEPvvEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHAT----- 1017
|
170
....*....|....*...
gi 163965357 1393 keTPTT--PSPEGVTAAP 1408
Cdd:PRK10811 1018 --APMTraPAPEYVPEAP 1033
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1068-1271 |
1.82e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.79 E-value: 1.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1068 GEKSASSPKRSP-KTAGPKETPPGGVTAVPPEISLPPKETPQNATPNESLAASSQKRSPKT---SVPKETPPGGVTAMPl 1143
Cdd:PRK12323 370 GGAGPATAAAAPvAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPealAAARQASARGPGGAP- 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1144 EIPSAPQKAPKTAVPKQIPTPEDAVTILAGSPLSPKKASKTAAPKEA--PATPSVGVIAVSGEISPSPKKTSKTAAPKEN 1221
Cdd:PRK12323 449 APAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDppPWEELPPEFASPAPAQPDAAPAGWVAESIPD 528
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 163965357 1222 SATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLT 1271
Cdd:PRK12323 529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFD 578
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1132-1541 |
1.86e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1132 ETPPGGVTAMPLEIPSAPQKAPKTAVPKQiPTPEDAVTILAGSPLSPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKK 1211
Cdd:PRK07764 379 ERLERRLGVAGGAGAPAAAAPSAAAAAPA-AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPP 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1212 TSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGV------------------------- 1266
Cdd:PRK07764 458 PAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLrerwpeilaavpkrsrktwaillpe 537
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1267 -------PVTLTPKGAPNALAESPASPK--KVPKTAAPEETSTTpspQKIPKVAGPKEASATPPSKKTPKTAVPKETSAP 1337
Cdd:PRK07764 538 atvlgvrGDTLVLGFSTGGLARRFASPGnaEVLVTALAEELGGD---WQVEAVVGPAPGAAGGEGPPAPASSGPPEEAAR 614
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1338 SEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTAAPLEIPISSKK 1417
Cdd:PRK07764 615 PAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPA 694
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1418 TSKMASPKETlvtpsskklSQTVGPKETSLEGATAVPLeiPPSHKKAPKTVDPKQVPLTPSPKDAPTTLAESPSSPKKAP 1497
Cdd:PRK07764 695 GAAPAQPAPA---------PAATPPAGQADDPAAQPPQ--AAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPA 763
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 163965357 1498 KTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAETQEVAVS 1541
Cdd:PRK07764 764 PAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAME 807
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1790-2010 |
1.93e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.79 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1790 AAPAPESALAITAPIqksPGANSNSASSPKCPDPSSKKDTKGLPSAVALAPQTVPVEKdtSKAIETLLVSPAKGSDCLHS 1869
Cdd:PRK12323 372 AGPATAAAAPVAQPA---PAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARR--SPAPEALAAARQASARGPGG 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1870 PKGPVGSQVATPLAAFTSDKVPPEAVSASVAPKPAPAASLTLAPSPVAPLPPKQPLLESAPGSVLESPSKLPVPAEEDEL 1949
Cdd:PRK12323 447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESI 526
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 163965357 1950 PPLIPPEAVSGGEPFQPILVNMPAPKPAGTPAPAPSAKQPVLKNnkgSGTESDSDESVPEL 2010
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASA---SGLPDMFDGDWPAL 584
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
437-867 |
2.60e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.47 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 437 SKDPASPVTSLVVPAAHKQF--PAPPASATLGVPVSPLPATEGLKNLPISALVNVGAPVSPAQAGLPTRKDTTLQPLAPI 514
Cdd:PHA03247 2548 AGDPPPPLPPAAPPAAPDRSvpPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPP 2627
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 515 ALKESPSSQSASSLEVLSEDTVTKKTTGGPAPVVRPAIAGVATTTSLRADSPPAVIR---ADSCVSPNTVSQPLKRSVTD 591
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRrraARPTVGSLTSLADPPPPPPT 2707
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 592 PAMAPRTAKNTAPSTTSPLVPLASEGCPVASSMALSPQNASVSETALA--LSPEIPKSVPFPDPPLAEISFSNAR-KVDA 668
Cdd:PHA03247 2708 PEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPArpARPPTTAGPPAPAPPAAPAAGPPRRlTRPA 2787
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 669 VSHMESSGSSRQGHPDASVTAkgTVVCLADSSLDTSVSASKGSALSGASSPLYPLEVSFLPEAGLAVQGPKGSLNKLSPT 748
Cdd:PHA03247 2788 VASLSESRESLPSPWDPADPP--AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRR 2865
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 749 PPSSKGAPVPSTG-----------APPSPKGAPIVPTESSISSKQVPAEILPSPQKTPEVTASRLISAVQSPKVDPIMSD 817
Cdd:PHA03247 2866 PPSRSPAAKPAAParppvrrlarpAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAP 2945
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 163965357 818 VTPTSPKKTSATAVPKDTSATLSLKSVPAVTSLSPPKAPVAPSNEATIVP 867
Cdd:PHA03247 2946 TTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPP 2995
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
1281-1376 |
2.85e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 2.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1281 ESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSegvtavpleiPPSPRKAPKTAA 1360
Cdd:PRK12270 34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAA----------AAAAPAAPPAAA 103
|
90
....*....|....*.
gi 163965357 1361 PKETPAPSPEGATTAP 1376
Cdd:PRK12270 104 AAAAPAAAAVEDEVTP 119
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
845-1130 |
2.86e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 46.00 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 845 PAVTSLSPPKAPVAPSneatiVPTEIPTSLKNALAAATPKETLATSIPKVTSPSPQKTPKSVSLKGAPAMTSKKATEIAA 924
Cdd:PRK07003 360 PAVTGGGAPGGGVPAR-----VAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPA 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 925 SKDVSPSQFPKEVPLLPHVPPTSPPKSPVSDTLSGALTSPPPKGPPAtlAETPTYPKKSPKPAASKKTPATPSPEGVTAV 1004
Cdd:PRK07003 435 TADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPA--SDAPPDAAFEPAPRAAAPSAATPAAVPDARA 512
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1005 PL------EIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSKEIPSKGvtavpLEISlplKETSKSATPGEKSASSPKRS 1078
Cdd:PRK07003 513 PAaasredAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLRNAG-----MRVS---SDRGARAAAAAKPAAAPAAA 584
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 163965357 1079 PKTAGPKetpPGGVTAVPPEISLPPKETPQNATPNESLAASSQKRSPKTSVP 1130
Cdd:PRK07003 585 PKPAAPR---VAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPPPWEDIP 633
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
1826-2056 |
3.36e-04 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 46.01 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1826 KKDTKGLPSAVALAPQTVPVEKDTSKAIETLLVSPAKGSDCLHS--------PKGPVGSQVATPLAAftsdKVPPEAVSA 1897
Cdd:PLN03237 1188 RGESGAAKKVSRQAPKKPAPKKTTKKASESETTEETYGSSAMETenvaevvkPKGRAGAKKKAPAAA----KEKEEEDEI 1263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1898 SVAPKPAPAASLTLAPSPVAPLP---PKQPLLESAPGSVLESPSKLPVPAEEDE---LPPLIP-PEAVSGGEPFQPILVN 1970
Cdd:PLN03237 1264 LDLKDRLAAYNLDSAPAQSAKMEetvKAVPARRAAARKKPLASVSVISDSDDDDddfAVEVSLaERLKKKGGRKPAAANK 1343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1971 MPAPKPAGTPAPAPSAKQPVLKnnkgsgtesDSDESVPELEEQDSTqtatqqaqlaaaaeiDEEPVSKAKQSRSEKKARK 2050
Cdd:PLN03237 1344 KAAKPPAAAKKRGPATVQSGQK---------LLTEMLKPAEAIGIS---------------PEKKVRKMRASPFNKKSGS 1399
|
....*.
gi 163965357 2051 AMSKLG 2056
Cdd:PLN03237 1400 VLGRAA 1405
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
964-1164 |
3.62e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.64 E-value: 3.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 964 PPPKGPPATLAETPTYPKKSPKPAASKKTPATPSPEGVTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSKEIP 1043
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGP 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1044 SKGVTAVPLEISLPLKETSKSATPGEKSASSPKRSPKTAGPKETPPGGVTAVPPEISLPPkeTPQNATPNESLAASSQKR 1123
Cdd:PRK12323 445 GGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPP--EFASPAPAQPDAAPAGWV 522
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 163965357 1124 SPKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAVPKQIPTP 1164
Cdd:PRK12323 523 AESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAP 563
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
1316-1594 |
3.99e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.85 E-value: 3.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1316 ASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGattapvqIPPSPRKGSKKAGSKET 1395
Cdd:PRK10263 324 AAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEG-------YPQQSQYAQPAVQYNEP 396
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1396 PTTPspegvtaAPLEIPISSKKTSKMASPKETLVTPSSKKLSQTVGPKETSLEGATAVPLEIPPSHKKAPKTVDPKQV-- 1473
Cdd:PRK10263 397 LQQP-------VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTyq 469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1474 -PLTPSPKDAPTTLAESPSSPKKAP-----KTAAPPSERVTTVPpEKPATPQKASATTASKVPVPAETQEVAVSSRETPV 1547
Cdd:PRK10263 470 qPAAQEPLYQQPQPVEQQPVVEPEPvveetKPARPPLYYFEEVE-EKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPS 548
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 163965357 1548 TPAVPPVKNPSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSKKAPR 1594
Cdd:PRK10263 549 VAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPR 595
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1140-1298 |
4.17e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.63 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1140 AMPLEIPSAPQKAPKTAVPKQipTPEDAVTILAGSPLSPKKASKTAAPKEAPATPSvgVIAVSGEISPSPKKTSKTAAPK 1219
Cdd:PRK07994 362 AAPLPEPEVPPQSAAPAASAQ--ATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPL--PETTSQLLAARQQLQRAQGATK 437
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 163965357 1220 ensatlPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGvPVTLTPKGAPNALAESPASPKKVPKTAAPEET 1298
Cdd:PRK07994 438 ------AKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKE-AYRWKATNPVEVKKEPVATPKALKKALEHEKT 509
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1326-1506 |
4.36e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.24 E-value: 4.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1326 PKTAVPketSAPSEGVTAVPLEIPPSPRKAPKTAAPkETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVT 1405
Cdd:PRK07994 361 PAAPLP---EPEVPPQSAAPAASAQATAAPTAAVAP-PQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGAT 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1406 AAPLEIPISSKKTSKMASPKETLVTPSSkklSQTVGPKETSLEGATAVpleippshKKAPKTVDPKQVPLTPSpkdAPTT 1485
Cdd:PRK07994 437 KAKKSEPAAASRARPVNSALERLASVRP---APSALEKAPAKKEAYRW--------KATNPVEVKKEPVATPK---ALKK 502
|
170 180
....*....|....*....|.
gi 163965357 1486 LAESPSSPKKAPKTAAPPSER 1506
Cdd:PRK07994 503 ALEHEKTPELAAKLAAEAIER 523
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
736-1039 |
5.45e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 45.45 E-value: 5.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 736 QGPKGSlnKLSPTPP----SSKGAPVPSTGA-PPSPKGAPIVPTESSISSKQVPAE-----ILPSPQKTPEVTA-SRLIS 804
Cdd:PTZ00449 512 EGPEAS--GLPPKAPgdkeGEEGEHEDSKESdEPKEGGKPGETKEGEVGKKPGPAKehkpsKIPTLSKKPEFPKdPKHPK 589
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 805 AVQSPKvdpimSDVTPTSPKKTSATAVPKDTSATLSLKSVPAVTSLSPPKAPVAPSNEATIVPTEIPTSLKNALAAATP- 883
Cdd:PTZ00449 590 DPEEPK-----KPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKPPKSPk 664
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 884 -------KETLATSIPKVTSPSPQKTPKSVSLKGAPAMTSKKATEIAASKDVSPSQFPKEVPLLPHVPPTsPPKSPVSDT 956
Cdd:PTZ00449 665 ppfdpkfKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFE-PIGDPDAEQ 743
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 957 LSGALTSPPPKGPPATLAETPTYPKKSPKPAASKKTPATPSPEGVTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKT 1036
Cdd:PTZ00449 744 PDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPGDHPSLPKKRHRLDGL 823
|
...
gi 163965357 1037 AVS 1039
Cdd:PTZ00449 824 ALS 826
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1158-1410 |
6.07e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 6.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1158 PKQIPTPEDAVTILAGSPLSPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKTsktaapkensatlPPKRSPKTAAPK 1237
Cdd:PHA03247 257 PPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPA-------------PPDPPPPAPAGD 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1238 ETPATSSEGVTAVPSEIsPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAgpkeas 1317
Cdd:PHA03247 324 AEEEDDEDGAMEVVSPL-PRPRQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFA------ 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1318 ATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPrkapktaapkETPAPSPEGATTAPVQIPPSPRKGSKKAgskeTPT 1397
Cdd:PHA03247 397 RGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPP----------ATPLPSAEPGSDDGPAPPPERQPPAPAT----EPA 462
|
250
....*....|...
gi 163965357 1398 TPSPEGVTAAPLE 1410
Cdd:PHA03247 463 PDDPDDATRKALD 475
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1251-1385 |
7.07e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.86 E-value: 7.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1251 PSEISPSPPTP--ASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAG------PKEASATPPS 1322
Cdd:PRK07994 361 PAAPLPEPEVPpqSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAarqqlqRAQGATKAKK 440
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 163965357 1323 KKTPKTAVPKETSAPSEGVTAVPlEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRK 1385
Cdd:PRK07994 441 SEPAAASRARPVNSALERLASVR-PAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKK 502
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
962-1049 |
7.13e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 7.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 962 TSPPPKGPPATLAETPTYPKKSPKPAASKKTPATPSPEGVTAVPleiPPCSKKAPKTAAPKESSATSSSKRAPKTAVSKE 1041
Cdd:PRK12270 41 TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPP---KPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
....*...
gi 163965357 1042 IPSKGVTA 1049
Cdd:PRK12270 118 TPLRGAAA 125
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1216-1361 |
7.19e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.86 E-value: 7.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1216 AAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNAL--AESPASPKKVPKTA 1293
Cdd:PRK07994 366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLqrAQGATKAKKSEPAA 445
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1294 APEETSTTPSPQKIPKVAGPKEASATPPSKKTPK--TAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAP 1361
Cdd:PRK07994 446 ASRARPVNSALERLASVRPAPSALEKAPAKKEAYrwKATNPVEVKKEPVATPKALKKALEHEKTPELAAK 515
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1181-1296 |
7.50e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.71 E-value: 7.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1181 ASKTAAPKEAPATPSVGVIAVSGEISPSPKKTSKTAAPKENSATLPP---KRSPKTAAPKETPATSSEGVTAVPSEISPS 1257
Cdd:PRK14951 371 EAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPpaaAPPAPVAAPAAAAPAAAPAAAPAAVALAPA 450
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 163965357 1258 PPTPASK---GVPVTLTP-KGAPNALAESPASPKKVPKTAAPE 1296
Cdd:PRK14951 451 PPAQAAPetvAIPVRVAPePAVASAAPAPAAAPAAARLTPTEE 493
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1279-1413 |
8.44e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.32 E-value: 8.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1279 LAESPASPKKVPKTAAPEeTSTTPSPQkiPKVAGPKEASATPPskkTPKTAVPKETSAPSegvtAVPLEIPPSPRKAPKT 1358
Cdd:PRK14951 362 LAFKPAAAAEAAAPAEKK-TPARPEAA--APAAAPVAQAAAAP---APAAAPAAAASAPA----APPAAAPPAPVAAPAA 431
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 163965357 1359 AAPKETPAPSPEGATTAPVQIPPSPRKGS--KKAGSKETPTTPSPEGVTAAPLEIPI 1413
Cdd:PRK14951 432 AAPAAAPAAAPAAVALAPAPPAQAAPETVaiPVRVAPEPAVASAAPAPAAAPAAARL 488
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1061-1341 |
8.45e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.46 E-value: 8.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1061 TSKSATPGEKSASSPKRSPKtagpketpPGGVTAVPPEISLPPKETPQNATPNEslAASSQKRSPKTSVPKETPPGGVTa 1140
Cdd:PRK07003 363 TGGGAPGGGVPARVAGAVPA--------PGARAAAAVGASAVPAVTAVTGAAGA--ALAPKAAAAAAATRAEAPPAAPA- 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1141 mpleiPSAPQKAPKTAVPKQIPTPEDAvtilagsplsPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKTSKTAAPke 1220
Cdd:PRK07003 432 -----PPATADRGDDAADGDAPVPAKA----------NARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAP-- 494
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1221 nSATLPPKRSPKTAAPKETPATSSEG-VTAVPSEISPS--PPTPA-------------------SKGVPVTLTPKGAPNA 1278
Cdd:PRK07003 495 -RAAAPSAATPAAVPDARAPAAASREdAPAAAAPPAPEarPPTPAaaapaaraggaaaaldvlrNAGMRVSSDRGARAAA 573
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 163965357 1279 LAESPASPKKVPKTAAPEETSTTPSP--QKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGV 1341
Cdd:PRK07003 574 AAKPAAAPAAAPKPAAPRVAVQVPTPraRAATGDAPPNGAARAEQAAESRGAPPPWEDIPPDDYV 638
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1172-1331 |
8.67e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.47 E-value: 8.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1172 AGSPLSPKKASKTAAPKEAPATPSVGVIAVSGEISPSPkktSKTAAPKENSATLPPKRSPKTAAPkeTPATSSEGVTAVP 1251
Cdd:PRK07994 365 LPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPP---PASAPQQAPAVPLPETTSQLLAAR--QQLQRAQGATKAK 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1252 seisPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVP 1331
Cdd:PRK07994 440 ----KSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAK 515
|
|
| PRK12373 |
PRK12373 |
NADH-quinone oxidoreductase subunit E; |
1205-1363 |
9.02e-04 |
|
NADH-quinone oxidoreductase subunit E;
Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 44.02 E-value: 9.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1205 ISPSPKKTSKTAAPKENSATLppkrspKTAAPKETPATSSEGVTAVpseispSPPTPASKGVPVTLTPKGAPNAlAESPA 1284
Cdd:PRK12373 177 VKPGPQIGRYASEPAGGLTSL------TEEAGKARYNASKALAEDI------GDTVKRIDGTEVPLLAPWQGDA-APVPP 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1285 SPKKVPKTAAPEETST--TPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPK 1362
Cdd:PRK12373 244 SEAARPKSADAETNAAlkTPATAPKAAAKNAKAPEAQPVSGTAAAEPAPKEAAKAAAAAAKPALEDKPRPLGIARPGGAD 323
|
.
gi 163965357 1363 E 1363
Cdd:PRK12373 324 D 324
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
964-1209 |
9.39e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.15 E-value: 9.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 964 PPPKGPPATLAETPTYPKK-SPKPAASKKTPATPSPEGVTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKT-AVSKE 1041
Cdd:PLN03209 328 VPPKESDAADGPKPVPTKPvTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTPPSSSPASSKSVdAVAKP 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1042 IPSKGVTAVPLEISLPLKETSKSATPGEKSASSPKRSPKTAGPKETPPGGVTAVPPEISLPPKETPQNATPNESLAASSQ 1121
Cdd:PLN03209 408 AEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVPDTAPATAATDAA 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1122 KRSPKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAVPKqipTPEDAVTILAGSPLSPKKASKTAAPKEAPATPSVGVIAV 1201
Cdd:PLN03209 488 APPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSS---TNEVVKVGNSAPPTALADEQHHAQPKPRPLSPYTMYEDL 564
|
....*...
gi 163965357 1202 SGEISPSP 1209
Cdd:PLN03209 565 KPPTSPTP 572
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
1273-1515 |
9.69e-04 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 44.28 E-value: 9.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1273 KGAPNALAESPASPKKVPKTAAPE--ETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPP 1350
Cdd:PHA03379 406 EKASEPTYGTPRPPVEKPRPEVPQslETATSHGSAQVPEPPPVHDLEPGPLHDQHSMAPCPVAQLPPGPLQDLEPGDQLP 485
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1351 SPRKAPKTAApkeTPAPSPEGATTAPVQipPSPRKGSKKAgsketPTTPSPEGVTAAPLEIPISSKKTSKMASPKETLVT 1430
Cdd:PHA03379 486 GVVQDGRPAC---APVPAPAGPIVRPWE--ASLSQVPGVA-----FAPVMPQPMPVEPVPVPTVALERPVCPAPPLIAMQ 555
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1431 psskklsqtvGPKETSLEGATAVpleippSHKKAPKTVDPKQVPLTPSPKDAPTTLaESPSSPKKAPKTAAPPseRVTTV 1510
Cdd:PHA03379 556 ----------GPGETSGIVRVRE------RWRPAPWTPNPPRSPSQMSVRDRLARL-RAEAQPYQASVEVQPP--QLTQV 616
|
....*
gi 163965357 1511 PPEKP 1515
Cdd:PHA03379 617 SPQQP 621
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1869-1989 |
9.84e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.32 E-value: 9.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1869 SPKGPVGSQVATPLAAFTSDKVPPEAVSASVAPKPAPAASLTLAPSPVAPLPPKQPLLESAPGSVLESPSKLPVPAEEDE 1948
Cdd:PRK14951 372 AAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAP 451
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 163965357 1949 LPPLiPPEAVSGGEPFQP-ILVNMPAPKPAGTPAPAPSAKQP 1989
Cdd:PRK14951 452 PAQA-APETVAIPVRVAPePAVASAAPAPAAAPAAARLTPTE 492
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
88-626 |
1.08e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.54 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 88 PSGTAPPTPTFLP-HLIGPPISPAALALASPMIGLAQKGARSSSAPLSlvALAPHSVQKSSVCPPHPLTSPPSAAgAELG 166
Cdd:PHA03247 2509 PPAPSRLAPAILPdEPVGEPVHPRMLTWIRGLEELASDDAGDPPPPLP--PAAPPAAPDRSVPPPRPAPRPSEPA-VTSR 2585
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 167 ALTASIPPLEPKTSTSQVPSQGTLNLKGTAPCPPDVVRAFPshlenPLASVQPGLMSCPQTLSNTSPVKGVPISSAltqs 246
Cdd:PHA03247 2586 ARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDP-----PPPSPSPAANEPDPHPPPTVPPPERPRDDP---- 2656
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 247 rlslnlKGPVSPPARNTAAPSIPLAPStslgchlpllhhssvdSPIQPPGQSGLavsNPTSVGHSGIAASCPPERCVVPA 326
Cdd:PHA03247 2657 ------APGRVSRPRRARRLGRAAQAS----------------SPPQRPRRRAA---RPTVGSLTSLADPPPPPPTPEPA 2711
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 327 LPSRLLAVDSGAAPSDDKGSSAVTNELCSPPGSSNVAGTSLSPKASLVPKGSNVALQPLVTQVPAS-QKTGLKEIPVSCI 405
Cdd:PHA03247 2712 PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAgPPRRLTRPAVASL 2791
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 406 GATHHALDNPSAISVAPATHVPPPTSSGLVSSKDPASPVTSLVVPAAHKQFPAPPA-SATLGVPVSPlPATEGLKNLPIS 484
Cdd:PHA03247 2792 SESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPpSLPLGGSVAP-GGDVRRRPPSRS 2870
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 485 ALVNVGAPVSPAQAGL---PTRKDTTLQPLAPIALKESPSSQSASSLEVLSEDTVTKKTTGGPAPVVRPAIAGVATTTSL 561
Cdd:PHA03247 2871 PAAKPAAPARPPVRRLarpAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPA 2950
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 163965357 562 RADSPPAVIRADSCVSPNTVSQPLKRSVTDPAMAPRTAknTAPSTTSPLVPLASEGCPVASSMAL 626
Cdd:PHA03247 2951 GAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREA--PASSTPPLTGHSLSRVSSWASSLAL 3013
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1231-1371 |
1.18e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.93 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1231 PKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPkTAAPEETSTTPSPQKIPKV 1310
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAP-VAAPAAAAPAAAPAAAPAA 444
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 163965357 1311 AGPKEASATPPSKKTpkTAVPKETSapsegvtavPLEIPPSPRKAPKTAAPKETPAPSPEG 1371
Cdd:PRK14951 445 VALAPAPPAQAAPET--VAIPVRVA---------PEPAVASAAPAPAAAPAAARLTPTEEG 494
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1202-1326 |
1.21e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.93 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1202 SGEISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEgVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAE 1281
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAAS-APAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVAL 447
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 163965357 1282 SPASPKKVPKTAAPEETSTTPSPQkiPKVAGPKEASATPPSKKTP 1326
Cdd:PRK14951 448 APAPPAQAAPETVAIPVRVAPEPA--VASAAPAPAAAPAAARLTP 490
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
1268-1508 |
1.66e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 43.54 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1268 VTLTPKGAP--NALAESPASPKKVPKTAAPEETSTTPSPQKIPKvagpKEASATPPSkktpktaVPKETSAPSEGVTAVP 1345
Cdd:PRK08691 356 LAFAPLAAAscDANAVIENTELQSPSAQTAEKETAAKKPQPRPE----AETAQTPVQ-------TASAAAMPSEGKTAGP 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1346 LEIPPSPRKAPKTAAPKETPAPSPEGATTApvqippsprkgsKKAGSKETPTTPSPEGVTAAPLEIPISSKKTSKMASPK 1425
Cdd:PRK08691 425 VSNQENNDVPPWEDAPDEAQTAAGTAQTSA------------KSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSEN 492
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1426 ETLVTPSSKKLSQTVGPKETSlegATAVPLEIPPSHKKAPKtvDPKQVPLTPSPKDAPTTLAES-------PSSPKKAPK 1498
Cdd:PRK08691 493 PIQATPNDEAVETETFAHEAP---AEPFYGYGFPDNDCPPE--DGAEIPPPDWEHAAPADTAGGgadeeaeAGGIGGNNT 567
|
250
....*....|
gi 163965357 1499 TAAPPSERVT 1508
Cdd:PRK08691 568 PSAPPPEFST 577
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
944-1344 |
1.72e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 43.60 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 944 PPTSPPKSPVSDTLSGALTSPPPKGPPATLAETPTYPKKSPKPAASKKTPATPSPEGVTAVPLEIPPCSKKAPKTAAPKE 1023
Cdd:pfam03154 146 PSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTA 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1024 SSATSSSKRAPKTAVSKEIPSKGVTAVPLEISLPLKETSKSATPGEKSASSPKRSPKTAGPKETPPGGvtaVPPEISLPP 1103
Cdd:pfam03154 226 APHTLIQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPV---PPQPFPLTP 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1104 KETPQNATPNESLAASSQKRS-PKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAVPKQIPTPEDAVTILAGSPLSPKKAS 1182
Cdd:pfam03154 303 QSSQSQVPPGPSPAAPGQSQQrIHTPPSQSQLQSQQPPREQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPS 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1183 KTAAPKEAPATPSVGVI-AVSGEISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSE-----GVTAVPSEiSP 1256
Cdd:pfam03154 383 PFQMNSNLPPPPALKPLsSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAAShpptsGLHQVPSQ-SP 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1257 SPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPeeTSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSA 1336
Cdd:pfam03154 462 FPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPPSSASV--SSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRS 539
|
....*...
gi 163965357 1337 PSEGVTAV 1344
Cdd:pfam03154 540 PSPEPTVV 547
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1096-1261 |
1.85e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1096 PPEISLPPKETPQNATPNESLAASSQKRSPKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAVPKQIPTPEDavtilAGSP 1175
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQR-----AQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1176 LSPKKASKTAAPKEAPATPSVGVIAvsgEISPSPKKTSKTAAPKENSatlPPKRSPKTAAPKETPATSSEGVTAVPSEIS 1255
Cdd:PRK07994 436 TKAKKSEPAAASRARPVNSALERLA---SVRPAPSALEKAPAKKEAY---RWKATNPVEVKKEPVATPKALKKALEHEKT 509
|
....*.
gi 163965357 1256 PSPPTP 1261
Cdd:PRK07994 510 PELAAK 515
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1873-1990 |
1.89e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1873 PVGSQVATPLAAfTSDKVPPEAVSASVAPKPAPA-ASLTLAPSPVAPLPPKQPLLESAPGSVLESPSKLPVPAEEDELPP 1951
Cdd:PRK14951 366 PAAAAEAAAPAE-KKTPARPEAAAPAAAPVAQAAaAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 163965357 1952 LIPPEAVSggEPFQPILVNMP---APKPAGTPAPAPSAKQPV 1990
Cdd:PRK14951 445 VALAPAPP--AQAAPETVAIPvrvAPEPAVASAAPAPAAAPA 484
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
1261-1342 |
1.94e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.34 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1261 PASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPsPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEG 1340
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAA-PAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116
|
..
gi 163965357 1341 VT 1342
Cdd:PRK12270 117 VT 118
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
1346-1583 |
2.09e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 42.99 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1346 LEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTAAPLEIPISSKKTSKMASPK 1425
Cdd:PLN03209 320 LAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTPPSSSPASSK 399
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1426 EtlVTPSSKKLSQTVGPKETSLEGATAVPLEIPPSHKKAPKTVDPKQVPLTPspkdapttlaesPSSPKKAPKTAAPPSE 1505
Cdd:PLN03209 400 S--VDAVAKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKP------------PTSPSPTAPTGVSPSV 465
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 163965357 1506 RVTTVPPEKPATPQKASATTASKVPVPAETQEVAVSSRETPVTPAVPPVKNPSSHKKTSKTIELKEAPATLPPSPTKS 1583
Cdd:PLN03209 466 SSTSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALAD 543
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
852-1209 |
2.13e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.24 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 852 PPKAPVAPSNEATIVPTEIPTSLKNALAAATPKETlatsiPKVTSPSPQKTPKSVSLKGAPAMTSKKATEIAASKDVSPS 931
Cdd:PHA03307 71 PPPGPGTEAPANESRSTPTWSLSTLAPASPAREGS-----PTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 932 QFPKEVPLLPHVPPTSPPKSPVSDTLSGALTSPPPKGPPATLAETPTYPKKSPKPAASKKTPATPSPEGVTAVPLEIPPC 1011
Cdd:PHA03307 146 PPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1012 SKKAPKTAAPKESSATSSSKR---APKTAVSKEIPSKGVTAVPLEISLPLKETSKSATPGEKSASSPKRSPKTAGPKETP 1088
Cdd:PHA03307 226 RSAADDAGASSSDSSSSESSGcgwGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1089 PGGVTAVPPEISLPPKETPQNATPNESLAASSQKRSPKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAVPKQIPTPEDAV 1168
Cdd:PHA03307 306 GPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRP 385
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 163965357 1169 TILAGSPLSPKKASKTAAPKEAPATPSVGVIAVSGEISPSP 1209
Cdd:PHA03307 386 TRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAF 426
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
1186-1433 |
2.49e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 43.16 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1186 APKEAPATPSVGVIAVSGEISPSPKKTSKTAAPKEnsatlpPKRSPKTAAPKETPATSSEgvTAVPSEispspptpASKG 1265
Cdd:PRK08691 359 APLAAASCDANAVIENTELQSPSAQTAEKETAAKK------PQPRPEAETAQTPVQTASA--AAMPSE--------GKTA 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1266 VPVTLtpkgapNALAESPaspkkvPKTAAPEETSTTPSPQKIPK--VAGPKEASATPPSKKTPKTAVPKETSAPSEGVta 1343
Cdd:PRK08691 423 GPVSN------QENNDVP------PWEDAPDEAQTAAGTAQTSAksIQTASEAETPPENQVSKNKAADNETDAPLSEV-- 488
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1344 vpleippsPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTAAPLEIPISSKKTSKMAS 1423
Cdd:PRK08691 489 --------PSENPIQATPNDEAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADTAGGGADEEAEAG 560
|
250
....*....|
gi 163965357 1424 PKETLVTPSS 1433
Cdd:PRK08691 561 GIGGNNTPSA 570
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
1116-1631 |
2.61e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 43.12 E-value: 2.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1116 LAASSQKRSPKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAvPKQIPTPEDAVTILAGSPLSPKKASKTAAPKEAPATPS 1195
Cdd:PHA03377 354 LATGGEPRGDATSETSSDEDTGRQGSDVELESSDDELPYID-PNMEPVQQRPVMFVSRVPWRKPRTLPWPTPKTHPVKRT 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1196 VGVIAVSGEISPSPKKTSKTAAPKENSatlppkrSPKTAAPKETPAtssEGVTAVPSEISPSPPTPASKGVPVTL-TPKG 1274
Cdd:PHA03377 433 LVKTSGRSDEAEQAQSTPERPGPSDQP-------SVPVEPAHLTPV---EHTTVILHQPPQSPPTVAIKPAPPPSrRRRG 502
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1275 APNALAESPASPKKVPKTAAPEETSTTPSPQKIP----KVAGPKEASATP----PSKKTPKTAVPKETSAPSEGVTAVPL 1346
Cdd:PHA03377 503 ACVVYDDDIIEVIDVETTEEEESVTQPAKPHRKVqdgfQRSGRRQKRATPpkvsPSDRGPPKASPPVMAPPSTGPRVMAT 582
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1347 EIPPSPRKAPKTAAPKE-------TPAPSPEGAT---TAPVQIPPSPRKGSKKAGSKETPTTPSPEGV--TAAPLEIPIS 1414
Cdd:PHA03377 583 PSTGPRDMAPPSTGPRQqakckdgPPASGPHEKQppsSAPRDMAPSVVRMFLRERLLEQSTGPKPKSFweMRAGRDGSGI 662
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1415 SKKTSKMASPKETLVTPSSKKL-SQTVGPketSLEGATAVPLEIPPSHKKAPKTVDPKQVPLTPSPKDAPTTLAESPSsp 1493
Cdd:PHA03377 663 QQEPSSRRQPATQSTPPRPSWLpSVFVLP---SVDAGRAQPSEESHLSSMSPTQPISHEEQPRYEDPDDPLDLSLHPD-- 737
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1494 kkapkTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAETQEVAVSSRETPVTPAVPPVKNPSSHKKTSKTIELKEAP 1573
Cdd:PHA03377 738 -----QAPPPSHQAPYSGHEEPQAQQAPYPGYWEPRPPQAPYLGYQEPQAQGVQVSSYPGYAGPWGLRAQHPRYRHSWAY 812
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1574 ATLPP--SPTKSPKIPSSKKAPRTSAPKEFPASPSIKPVTTSLAQTAPPSLQKAPSTTIP 1631
Cdd:PHA03377 813 WSQYPghGHPQGPWAPRPPHLPPQWDGSAGHGQDQVSQFPHLQSETGPPRLQLSQVPQLP 872
|
|
| UBA_HYPK |
cd14361 |
UBA-like domain found in Huntingtin-interacting protein K (HYPK) and similar proteins; HYPK, ... |
2148-2186 |
2.66e-03 |
|
UBA-like domain found in Huntingtin-interacting protein K (HYPK) and similar proteins; HYPK, also called Huntingtin yeast partner K or Huntingtin yeast two-hybrid protein K, is an intrinsically unstructured Huntingtin (HTT)-interacting protein with chaperone-like activity. It is involved in regulating cell growth, cell cycle, unfolded protein response, and cell death. All members in this subfamily contain an N-terminal ubiquitin-associated (UBA) that shows high sequence similarity with that of eukaryotic nascent polypeptide-associated complex proteins (NAC) which is one of the cytosolic chaperones that contact the nascent polypeptide chains as they emerge from the ribosome and assist in post-translational processes.
Pssm-ID: 270544 Cd Length: 41 Bit Score: 37.49 E-value: 2.66e-03
10 20 30
....*....|....*....|....*....|....*....
gi 163965357 2148 VEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186
Cdd:cd14361 3 VKKEDVELIVNELEVSKAQAERALREHNGDVVKALRALI 41
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
1302-1406 |
2.75e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.96 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1302 PSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPP 1381
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
90 100 110
....*....|....*....|....*....|.
gi 163965357 1382 SPRKGSKKA------GSKETPTTPSPEGVTA 1406
Cdd:PRK12270 118 TPLRGAAAAvaknmdASLEVPTATSVRAVPA 148
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1252-1632 |
2.81e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 2.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1252 SEISPSPPTPASKGVPVTLTpkGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVP 1331
Cdd:PHA03307 18 GEFFPRPPATPGDAADDLLS--GSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1332 KETSAPSEGvtavpleippSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPEGVTAAPLEI 1411
Cdd:PHA03307 96 APASPAREG----------SPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASD 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1412 PISSKKTSKMASPKETLVTPSSKKLSQTVGPKETSLEGATAVPLEIPPSHKKAPKTVDPKQVPLTPSPKDAPTTLAESPS 1491
Cdd:PHA03307 166 AASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1492 SPKKAPKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAETQEVAVSSRETPVTPAVPPVKNPSSHKKTSKTIELKE 1571
Cdd:PHA03307 246 GCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESS 325
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 163965357 1572 APATLPPSPTKSPKIPSSKKAPRTSAPKEFPASPSikpvTTSLAQTAPPSLQKAPSTTIPK 1632
Cdd:PHA03307 326 SSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPA----DPSSPRKRPRPSRAPSSPAASA 382
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
1278-1390 |
3.12e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.49 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1278 ALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAvpketSAPSEGVTAVPLEIPPSPrkaPK 1357
Cdd:PRK14950 354 AVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRE-----TATPPPVPPRPVAPPVPH---TP 425
|
90 100 110
....*....|....*....|....*....|...
gi 163965357 1358 TAAPKETPAPSPegATTAPVQIPPSPRKGSKKA 1390
Cdd:PRK14950 426 ESAPKLTRAAIP--VDEKPKYTPPAPPKEEEKA 456
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1283-1671 |
3.45e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1283 PASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPktaAPK 1362
Cdd:PRK07764 387 VAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAA---APS 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1363 ETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPE--GVTAAPLE---------IPISSKKTSKMASPKETLVTP 1431
Cdd:PRK07764 464 AQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPagADDAATLRerwpeilaaVPKRSRKTWAILLPEATVLGV 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1432 SSKKLsqTVGPKETSLEGATAVPlEIPPSHKKAPKTVDPKQVPLTPSPKDAPTTLAESPSSPKKAPKTAAPPSERVTTVP 1511
Cdd:PRK07764 544 RGDTL--VLGFSTGGLARRFASP-GNAEVLVTALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAA 620
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1512 PEKPATPQKASATTASKVPVPAETQEVAVSSReTPVTPAVPPVKNPSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSKK 1591
Cdd:PRK07764 621 PAAPAAPAPAGAAAAPAEASAAPAPGVAAPEH-HPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPA 699
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1592 APRTSAPKEFPASPSIKPVTTSLAQT---APPSLQKAPSTTIPKENLAAPAVLPVSSKSPAAPAAASASLSPATAAPQTA 1668
Cdd:PRK07764 700 QPAPAPAATPPAGQADDPAAQPPQAAqgaSAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
...
gi 163965357 1669 PKE 1671
Cdd:PRK07764 780 SEE 782
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1089-1435 |
3.65e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.47 E-value: 3.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1089 PGGVTAVPPEISLPPKETPQNATPNESLAASSQKRSPKTSVPKETPPGGVTAMPLEIPSA-PQKAPKTAVPKQIPTPEDA 1167
Cdd:PHA03307 27 TPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRStPTWSLSTLAPASPAREGSP 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1168 VTILAGSPLSPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGV 1247
Cdd:PHA03307 107 TPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAP 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1248 TAVPSEISPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPK 1327
Cdd:PHA03307 187 SSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1328 TavpketsAPSEGVTAVPLEIPPSPRkAPKTAAPKETPAPSPEGATTAPVqiPPSPRKGSKKAGSKET---PTTPSPEGV 1404
Cdd:PHA03307 267 T-------RIWEASGWNGPSSRPGPA-SSSSSPRERSPSPSPSSPGSGPA--PSSPRASSSSSSSRESsssSTSSSSESS 336
|
330 340 350
....*....|....*....|....*....|.
gi 163965357 1405 TAAPLEIPISSKKTSKMASPKETLVTPSSKK 1435
Cdd:PHA03307 337 RGAAVSPGPSPSRSPSPSRPPPPADPSSPRK 367
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
1148-1355 |
3.68e-03 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 42.54 E-value: 3.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1148 APQKAPKTAVPKQIPTPEDAVTILAGS---------PLSPKK--ASKTAAPKEAPATPSVGVIAVSGE------ISPSPK 1210
Cdd:PLN03237 1201 APKKPAPKKTTKKASESETTEETYGSSametenvaeVVKPKGraGAKKKAPAAAKEKEEEDEILDLKDrlaaynLDSAPA 1280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1211 KTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKG-VPVTLTPKGAPNALAESPASPKKV 1289
Cdd:PLN03237 1281 QSAKMEETVKAVPARRAAARKKPLASVSVISDSDDDDDDFAVEVSLAERLKKKGGrKPAAANKKAAKPPAAAKKRGPATV 1360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1290 PKTA-------APEETSTTPSPQKIPKVAgpkeasATPPSKKTP----KTAVPKET-----SAPSEGVTAVPLEIPPSPR 1353
Cdd:PLN03237 1361 QSGQklltemlKPAEAIGISPEKKVRKMR------ASPFNKKSGsvlgRAATNKETessenVSGSSSSEKDEIDVSAKPR 1434
|
..
gi 163965357 1354 KA 1355
Cdd:PLN03237 1435 PQ 1436
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
747-1112 |
3.85e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 3.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 747 PTPPSSKGAPVPSTGAPPSPKGAPIVPTESSISSKQVPAEILPSPQKTPEVTASRLISAVQSPKVDPIMSDVTPTSPKKT 826
Cdd:PRK07764 418 AAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAP 497
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 827 SATAVPKDTSATLSL------------KSVPAVTSLSPPKAPVAPSNEATIVPTEIPTSLKNALAAATPKETLATSIPKV 894
Cdd:PRK07764 498 AAPAAPAGADDAATLrerwpeilaavpKRSRKTWAILLPEATVLGVRGDTLVLGFSTGGLARRFASPGNAEVLVTALAEE 577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 895 TSPSPQKT------PKSVSLKGAPAMTSKKATEIAASKDVSPSQFPKEVPllphvPPTSPPKSPVSDTLSGALTSPPPKG 968
Cdd:PRK07764 578 LGGDWQVEavvgpaPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAP-----APAGAAAAPAEASAAPAPGVAAPEH 652
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 969 PPATLAETPTYPKKSPKPA-ASKKTPATPSPEGVTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSKEIPSKGV 1047
Cdd:PRK07764 653 HPKHVAVPDASDGGDGWPAkAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPS 732
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 163965357 1048 TAVPLEISLPLKETSKSATPGEKSASSPKRSPKTAGPKETPPGGVTAVPPEISLPPKETPQNATP 1112
Cdd:PRK07764 733 PAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDED 797
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2-269 |
4.55e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 4.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 2 PGEATETVPATEQELPQPQAETAvlPMSSAlkvAAVGQPGPTPPSSLGPQQSPIVTAHQPSPLPSSVSSTPFEVPFAQPI 81
Cdd:PHA03247 2743 AVPAGPATPGGPARPARPPTTAG--PPAPA---PPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAA 2817
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 82 TAETALPSGTAPPTPTFLPhlIGPPISPAALALASPMIGLAQKGARSSSAPlslvalAPHSVQKSSVCPPHPLTSPPSAA 161
Cdd:PHA03247 2818 LPPAASPAGPLPPPTSAQP--TAPPPPPGPPPPSLPLGGSVAPGGDVRRRP------PSRSPAAKPAAPARPPVRRLARP 2889
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 162 GAELGALTASIPPLEP-KTSTSQVPSQGTlnlkgTAPCPPDVVRAFPSHLENPLASVQPGLMSCPQTLSNTSPVKGVPIS 240
Cdd:PHA03247 2890 AVSRSTESFALPPDQPeRPPQPQAPPPPQ-----PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWL 2964
|
250 260 270
....*....|....*....|....*....|
gi 163965357 241 SALTQSRLSL-NLKGPVSPPARNTAAPSIP 269
Cdd:PHA03247 2965 GALVPGRVAVpRFRVPQPAPSREAPASSTP 2994
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
1450-1598 |
4.63e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.33 E-value: 4.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1450 ATAVPLEIPPSHKKAPKTVDPKQVPLTPSPKDAPTTLAESPSsPKKAPKTAAPP--SERVTTVPPE--KPATPQKASATT 1525
Cdd:PRK10811 877 AAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPE-VIAAPVTEQPQviTESDVAVAQEvaEHAEPVVEPQDE 955
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 163965357 1526 ASKVPVPAETQEVAVSSRETPVTPAVPPVKNPSSHKKTSKTIELKEAPATLPPSPTKSpkipSSKKAPRTSAP 1598
Cdd:PRK10811 956 TADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEH----NHATAPMTRAP 1024
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
728-870 |
4.66e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 42.07 E-value: 4.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 728 LPEAGLAVQGPKGSLNKLSPTPPSSKGAPVPSTGAPPSPKgapivPTESSISSKQVPAEILPSPQKTPEvtasrlisAVQ 807
Cdd:PRK14971 362 LTQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPS-----PSQSSAAAQPSAPQSATQPAGTPP--------TVS 428
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 163965357 808 SPKVDPIMSDVTPTSPKKTSATAVPKDTSATLSLKSVPAVTSLSPPKAPVA-PSNEATIVPTEI 870
Cdd:PRK14971 429 VDPPAAVPVNPPSTAPQAVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEqATGNIKEAPTGT 492
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
729-1158 |
4.71e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 4.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 729 PEAGLAVQGPKGSlnklsPTPPSSKGAPVPSTGAPPSPKGAPIVPTESSISSKQVPAeilPSPQKTPEVTASRLISAVQS 808
Cdd:PRK07764 381 LERRLGVAGGAGA-----PAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPA---PAPAPAPAPPSPAGNAPAGG 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 809 PKVDPIMSDVTPTSpkkTSATAVPKDTSATLSLKSVPAVTSLSPPKAPVAPSNEATIVPTEIPTSLKNALAAATPKETLA 888
Cdd:PRK07764 453 APSPPPAAAPSAQP---APAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPKRSRK 529
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 889 TSIPKVTSPSPQKTPKSVSLKG------APAMTSKKATEI--AASKDVSPSQFPKEVPLLPHVPPTSPPKSPVSDTLSGA 960
Cdd:PRK07764 530 TWAILLPEATVLGVRGDTLVLGfstgglARRFASPGNAEVlvTALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPP 609
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 961 LTSPPPKGPPATlaetptypkKSPKPAASKKTPATPSPEGVTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSK 1040
Cdd:PRK07764 610 EEAARPAAPAAP---------AAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAA 680
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1041 EIPSKGVTAVPLEISLPLKETSKSATPGEKSASSPKRSPKTAGPKETPPGGVTAVPPEISLPPketpqnaTPNESLAASS 1120
Cdd:PRK07764 681 PPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPP-------EPDDPPDPAG 753
|
410 420 430
....*....|....*....|....*....|....*...
gi 163965357 1121 QKRSPKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAVP 1158
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAP 791
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
1465-1559 |
4.75e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.18 E-value: 4.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1465 PKTVDPK--------QVPLTPSPKDAPTTLAESPSSPKKAPKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAEtq 1536
Cdd:PRK12270 22 PNSVDPSwreffadyGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAP-- 99
|
90 100
....*....|....*....|...
gi 163965357 1537 evavsSRETPVTPAVPPVKNPSS 1559
Cdd:PRK12270 100 -----PAAAAAAAPAAAAVEDEV 117
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
1097-1519 |
5.28e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 5.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1097 PEISLPPKETPQNATPNESLAASSQKRSPKTSVPKETPpggvtAMPLEIPSAPQKAPKTAVPKQIPTPEDAVTIlagSPL 1176
Cdd:PHA03378 565 PAPGLGPLQIQPLTSPTTSQLASSAPSYAQTPWPVPHP-----SQTPEPPTTQSHIPETSAPRQWPMPLRPIPM---RPL 636
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1177 SPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSsegvtAVPSEISP 1256
Cdd:PHA03378 637 RMQPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTP-----MRPPAAPP 711
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1257 SPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPkvagpkeasaTPPSKKTPKTAVPKEtsa 1336
Cdd:PHA03378 712 GRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGR----------ARPPAAAPGAPTPQP--- 778
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1337 psegvtavPLEIPPSPRKAPKTAApkeTPAPSPEGATTAPVQIPPSPrkgskkAGSKETPTTPSPEGVTAAPLEIPISSK 1416
Cdd:PHA03378 779 --------PPQAPPAPQQRPRGAP---TPQPPPQAGPTSMQLMPRAA------PGQQGPTKQILRQLLTGGVKRGRPSLK 841
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1417 KTSKMASPKETLVTPSskklsqtvgPKETSLEGATAVPLEIPPSHK--KAPKTVDPKQVPLTPSPKDAPTTLAESPSSPK 1494
Cdd:PHA03378 842 KPAALERQAAAGPTPS---------PGSGTSDKIVQAPVFYPPVLQpiQVMRQLGSVRAAAASTVTQAPTEYTGERRGVG 912
|
410 420
....*....|....*....|....*
gi 163965357 1495 KAPKTAAPPSERVTTVPPEKPATPQ 1519
Cdd:PHA03378 913 PMHPTDIPPSKRAKTDAYVESQPPH 937
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1204-1361 |
5.39e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.77 E-value: 5.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1204 EISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPNALAES- 1282
Cdd:PRK07994 363 APLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSe 442
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 163965357 1283 PASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPrkAPKTAAP 1361
Cdd:PRK07994 443 PAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPEL--AAKLAAE 519
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1891-1990 |
5.57e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.76 E-value: 5.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1891 PPEAVSASVAPKPAPAASLTLAPSPVAPLPPKQPLLESAPGSVLESPSKLPVPAEEDELPPLIPPEAVSGGEPFQPILVN 1970
Cdd:PRK07003 367 APGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGD 446
|
90 100
....*....|....*....|
gi 163965357 1971 MPAPKPAGTPAPAPSAKQPV 1990
Cdd:PRK07003 447 APVPAKANARASADSRCDER 466
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1483-1622 |
5.62e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.77 E-value: 5.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1483 PTTLAESPSSPK---KAPKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAET----QEVAVSSRETPVTPAVPPVK 1555
Cdd:PRK07994 361 PAAPLPEPEVPPqsaAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPettsQLLAARQQLQRAQGATKAKK 440
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 163965357 1556 N-PSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSKKAPR--TSAPKEFPASPSIKP--VTTSLAQTAPPSL 1622
Cdd:PRK07994 441 SePAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRwkATNPVEVKKEPVATPkaLKKALEHEKTPEL 512
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
929-1519 |
5.72e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 41.99 E-value: 5.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 929 SPSQFPKEVPLLPHVPPTSPPKSPVSDTLS----GALTSPPPKGPPATLAETP-TYPKKSPKPAASKKTPA---TPSPEG 1000
Cdd:PRK10263 300 TQPEYDEYDPLLNGAPITEPVAVAAAATTAtqswAAPVEPVTQTPPVASVDVPpAQPTVAWQPVPGPQTGEpviAPAPEG 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1001 VTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSKEIPSKGVTAVPLEISLPLKETSKSATPGEKSASSPKRSPK 1080
Cdd:PRK10263 380 YPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQ 459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1081 -TAGPKETPPGGVTAVPPEISLPPKETPQNATPNESLAASSQKRSPKTSVPKetppggvtampLEIPSAPQKAPKTAVPK 1159
Cdd:PRK10263 460 sTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEE-----------VEEKRAREREQLAAWYQ 528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1160 QIPTPEDAvtilagsplsPKKASKTAAPKEAPATPSVGVIAVSGEISPSPKKtsktaapkensATLPPKRSPKTAAPKET 1239
Cdd:PRK10263 529 PIPEPVKE----------PEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKK-----------ATLATGAAATVAAPVFS 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1240 PATSSEGVTAVPSEISPSPPTPASKGVPVTltpkgapnalAESPASPKKVPKTAAPEEtsttpspqkipkvagpKEASAT 1319
Cdd:PRK10263 588 LANSGGPRPQVKEGIGPQLPRPKRIRVPTR----------RELASYGIKLPSQRAAEE----------------KAREAQ 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1320 PPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAapKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTP 1399
Cdd:PRK10263 642 RNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQ--HDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGA 719
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1400 SPEGVTaaplEIPISSKKTSKMASPKETLVTPSSKKLSQTVGPKETSLEGATAVPLEIPPSHKKAPK-TVDPKQVPLTPS 1478
Cdd:PRK10263 720 NPFSLD----DFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQqPVAPQPQYQQPQ 795
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 163965357 1479 PKDAPTTLAESPSSPKKAPKTAAPPSERVTTVP----PEKPATPQ 1519
Cdd:PRK10263 796 QPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPqyqqPQQPVAPQ 840
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
743-1090 |
6.74e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 6.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 743 NKLSPTPPSSKGAPVPSTGAPPSPKGAPIVPTESSISSKQVPAEILPSPqktPEVTASRLISAVQSPKVDPIMSDVTPTS 822
Cdd:PHA03307 82 NESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSP---APDLSEMLRPVGSPGPPPAASPPAAGAS 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 823 PKKTSATAVPKDTSATLSLKSVPAVTSLSPPKAPVAPSNEAtivpteiptslknALAAATPKETLATSIPKVTSPSPQKT 902
Cdd:PHA03307 159 PAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPP-------------AAASPRPPRRSSPISASASSPAPAPG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 903 PKSVSLKGAPAMTSkKATEIAASKDVSPSQFPKEVPLLPHVPPTSPPKSPVSDTLSGALTSPPPKGPPAtlaetptyPKK 982
Cdd:PHA03307 226 RSAADDAGASSSDS-SSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE--------RSP 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 983 SPKPAASKKTPATPSPegvTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSkeiPSKGVTAVPLEISLPLKETS 1062
Cdd:PHA03307 297 SPSPSSPGSGPAPSSP---RASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRS---PSPSRPPPPADPSSPRKRPR 370
|
330 340
....*....|....*....|....*...
gi 163965357 1063 KSATPGEKSASSPKRSPKTAGPKETPPG 1090
Cdd:PHA03307 371 PSRAPSSPAASAGRPTRRRARAAVAGRA 398
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
1484-1583 |
6.89e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.33 E-value: 6.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1484 TTLAESPSSPKKAPKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAETQEVAVSsretPVTPAVPPVKnPSSHKKT 1563
Cdd:PRK14950 358 ALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPR----PVAPPVPHTP-ESAPKLT 432
|
90 100
....*....|....*....|
gi 163965357 1564 SKTIELKEAPATLPPSPTKS 1583
Cdd:PRK14950 433 RAAIPVDEKPKYTPPAPPKE 452
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
1237-1372 |
6.92e-03 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 41.61 E-value: 6.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1237 KETPATSSEGVTAVPSeispspptpasKGVPVTltpkgaPNALAESPASPKKVPKTAAPE----ETSTTPSPQKIPKVAG 1312
Cdd:PLN02217 537 KFTPAQYIQGDAWIPG-----------KGVPYI------PGLFAGNPGSTNSTPTGSAASsnttFSSDSPSTVVAPSTSP 599
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1313 PKEASATPPSkkTPKTAVPKETSAPsEGVTAVPLEIPPSPRKAPKTAApkeTPAPSPEGA 1372
Cdd:PLN02217 600 PAGHLGSPPA--TPSKIVSPSTSPP-ASHLGSPSTTPSSPESSIKVAS---TETASPESS 653
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
1255-1336 |
7.00e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.80 E-value: 7.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1255 SPSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKvagPKEASATPPSKKTPKTAVPKET 1334
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAA---AAAAPAAPPAAAAAAAPAAAAV 113
|
..
gi 163965357 1335 SA 1336
Cdd:PRK12270 114 ED 115
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1206-1426 |
7.22e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 7.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1206 SPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPsPPTPASKGVPVTLTPKGAPNALAESPAS 1285
Cdd:PHA03247 256 APPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAP-LALPAPPDPPPPAPAGDAEEEDDEDGAM 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1286 PKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETP 1365
Cdd:PHA03247 335 EVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPAS 414
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 163965357 1366 APSPeGATTAPVQIPPSPrkgskkAGSKETPTTPSPEGVTAAPLEIPISSKKTSKMASPKE 1426
Cdd:PHA03247 415 VPTP-APTPVPASAPPPP------ATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDD 468
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1226-1559 |
7.28e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 41.52 E-value: 7.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1226 PPKRSP----KTAAPKETpATSSEGVTAVPSEISPSPPTPASKGVPVTLTPKGAPnalaeSPASPKKVPktaapEETSTT 1301
Cdd:TIGR00927 79 PPKSSSemegEMLAPQAT-VGRDEATPSIAMENTPSPPRRTAKITPTTPKNNYSP-----TAAGTERVK-----EDTPAT 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1302 PS--PQKIPKVAG-PKEASATPPSKKTPKTAVPKETSAPSEGVTAVPL------EIPPSPRKAPKTAA--PKETPAPSPE 1370
Cdd:TIGR00927 148 PSraLNHYISTSGrQRVKSYTPKPRGEVKSSSPTQTREKVRKYTPSPLgrmvnsYAPSTFMTMPRSHGitPRTTVKDSEI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1371 GATTAPVQIPPSPRKGSKkagsketpTTPSP-EGVTAAPLEIPISSKKTSKMASP-----KETLVTP------SSKKLSQ 1438
Cdd:TIGR00927 228 TATYKMLETNPSKRTAGK--------TTPTPlKGMTDNTPTFLTREVETDLLTSPrsvveKNTLTTPrrvesnSSTNHWG 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1439 TVG------PKETSLEGATAVPLE---------IPPSHKKAP----KTVDPKQVPLTPSPKDAPTTLAESPSSPKKAPKT 1499
Cdd:TIGR00927 300 LVGknnlttPQGTVLEHTPATSEGqvtisimtgSSPAETKAStaawKIRNPLSRTSAPAVRIASATFRGLEKNPSTAPST 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1500 AAPPseRVTTVPpekpaTPQKASATTASKVPVPAETQEVAVSSRETPVTPAVPPVKNPSS 1559
Cdd:TIGR00927 380 PATP--RVRAVL-----TTQVHHCVVVKPAPAVPTTPSPSLTTALFPEAPSPSPSALPPG 432
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
1187-1281 |
7.75e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.41 E-value: 7.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1187 PKEAPATPSVGVIAVSGEISPSPKKTSKTAAPkenSATLPPKRSPKTAAPKetPATSSEGVTAVPSEISPSPPT-PASKG 1265
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAA---PAPAPPAAAAPAAPPK--PAAAAAAAAAPAAPPAAAAAAaPAAAA 112
|
90
....*....|....*..
gi 163965357 1266 VPVTLTP-KGAPNALAE 1281
Cdd:PRK12270 113 VEDEVTPlRGAAAAVAK 129
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1516-1711 |
7.93e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 7.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1516 ATPQKASATTASKVPVPAETQEVAVSSRETPV-TPAVPPVKNPSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSKKAPr 1594
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPaAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP- 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1595 tsapkefPASPSIKPVTTSLAQTAPPSLQKAPSTTIPKENLAAPAVLPVSSKSPAAPAAASASLSPATAAPQTAPKEATT 1674
Cdd:PRK12323 451 -------APAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVA 523
|
170 180 190
....*....|....*....|....*....|....*..
gi 163965357 1675 IPSCKKAAATETPIETSTAPSLEGAPKETSETSVSKV 1711
Cdd:PRK12323 524 ESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV 560
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
745-884 |
8.10e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.33 E-value: 8.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 745 LSPTPPSSKGAPVPSTGAPPSPKGAPIVPTESSISSKQVPAEILPSPQkTPEVTASRlisavqspkvdPIMSDVTPTSPk 824
Cdd:PRK14950 360 LVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETA-TPPPVPPR-----------PVAPPVPHTPE- 426
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 825 ktsatAVPKDTSATLSLKSVPAVTSLSPPKAPVAPSNEATIVPTEIPTSLKNALAAATPK 884
Cdd:PRK14950 427 -----SAPKLTRAAIPVDEKPKYTPPAPPKEEEKALIADGDVLEQLEAIWKQILRDVPPR 481
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
947-1051 |
8.43e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.41 E-value: 8.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 947 SPPKSPVSDTLSGALTSPPPKGPPATLAETPTYPkkSPKPAASKKTPATPSPEGVTAVPLEIPPCSKKAPKTAAPKESSA 1026
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAP--APAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114
|
90 100 110
....*....|....*....|....*....|...
gi 163965357 1027 TSSSK-RAPKTAVSK------EIPS-KGVTAVP 1051
Cdd:PRK12270 115 DEVTPlRGAAAAVAKnmdaslEVPTaTSVRAVP 147
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
1422-1549 |
8.51e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 41.30 E-value: 8.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1422 ASPKETLVTPSSKKLSQTVGPKETSlegATAVPLEIPPSHKKAPKTVDPKQVPltpSPKDAPTTLAESPSSPKKA-PKTA 1500
Cdd:PRK14971 369 ASGGRGPKQHIKPVFTQPAAAPQPS---AAAAASPSPSQSSAAAQPSAPQSAT---QPAGTPPTVSVDPPAAVPVnPPST 442
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 163965357 1501 APPSERVTTVPPEKPATPQKASATTAS-KVPVPAETQEVAVSSRETPVTP 1549
Cdd:PRK14971 443 APQAVRPAQFKEEKKIPVSKVSSLGPStLRPIQEKAEQATGNIKEAPTGT 492
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1256-1567 |
9.13e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 9.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1256 PSPPTPASKGVPVTLTPKGAPNALAESPASPKKVPKTAA--PEETSTTPSPQKIPKVAGPKEAS-ATPPSKKTPKTAVPK 1332
Cdd:PHA03247 209 PGPAAPADLTAAALHLYGASETYLQDEPFVERRVVISHPlrGDIAAPAPPPVVGEGADRAPETArGATGPPPPPEAAAPN 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1333 ETSAPSEGVTAV-----PLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPSPegvtaA 1407
Cdd:PHA03247 289 GAAAPPDGVWGAalagaPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPLPRPRQHYPLGFPKRRRPTWTPP-----S 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1408 PLEIPISSKKTSKMASPKETlvtpsskklsqtvgPKETSLEGATAVPLEIPPSHKKAPKTVDPKQVPlTPSPkdaPTTLA 1487
Cdd:PHA03247 364 SLEDLSAGRHHPKRASLPTR--------------KRRSARHAATPFARGPGGDDQTRPAAPVPASVP-TPAP---TPVPA 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1488 ESPSSPKKAPKTAAPPSERVTTVPPEkPATPQKASATTASKVPVPAETQEVAVSSRETPVTPAVPPVKNPSSHKKTSKTI 1567
Cdd:PHA03247 426 SAPPPPATPLPSAEPGSDDGPAPPPE-RQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLGRHPDTAGTV 504
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
1278-1424 |
9.35e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.00 E-value: 9.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1278 ALAESPASPKKVPkTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKA-- 1355
Cdd:PRK07994 356 MLAFHPAAPLPEP-EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAqg 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1356 ---PKTAAPKETPAPSPEGATTAPV-QIPPSPRKGSKKAGSKET--------PTTPSPEGVTAAPLEIPISSKKTSKMAS 1423
Cdd:PRK07994 435 atkAKKSEPAAASRARPVNSALERLaSVRPAPSALEKAPAKKEAyrwkatnpVEVKKEPVATPKALKKALEHEKTPELAA 514
|
.
gi 163965357 1424 P 1424
Cdd:PRK07994 515 K 515
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
892-1068 |
9.43e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.00 E-value: 9.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 892 PKVTSPSPQKTPKSVSLKGAPAMTSKKATEIAASKDVSPSQFPKEVPLlphVPPTSPPKSPVSDtLSGALTSPPPKGPPA 971
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQ---QAPAVPLPETTSQ-LLAARQQLQRAQGAT 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 972 TlaetptyPKKSPKPAASKKTPATPSPEGVTAVPLEIPPCSKKAPK--------TAAPKESSATSSSKRAPKTAVSKEIP 1043
Cdd:PRK07994 437 K-------AKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKkeayrwkaTNPVEVKKEPVATPKALKKALEHEKT 509
|
170 180
....*....|....*....|....*...
gi 163965357 1044 SKGVTAVPLEISLP---LKETSKSATPG 1068
Cdd:PRK07994 510 PELAAKLAAEAIERdpwAALVSQLGLPG 537
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
1311-1412 |
9.89e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.03 E-value: 9.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163965357 1311 AGPKEASATPPSKKTPKTAVPKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKA 1390
Cdd:PRK12270 34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
90 100
....*....|....*....|....*.
gi 163965357 1391 GSKETPTTpSPEGVTA----APLEIP 1412
Cdd:PRK12270 114 EDEVTPLR-GAAAAVAknmdASLEVP 138
|
|
| |
