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Conserved domains on  [gi|157821763|ref|NP_001099803|]
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galectin-12 [Rattus norvegicus]

Protein Classification

galectin family protein( domain architecture ID 10658251)

galectin family protein may exclusively bind beta-galactosides such as lactose in a manner independent of metal ions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Gal-bind_lectin smart00908
Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are ...
 33-158 1.22e-44

Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction.


:

Pssm-ID: 214904  Cd Length: 122  Bit Score: 148.12  E-value: 1.22e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763    33 GGLYAGKMIMLQGVVPRHARRFQVDFQCGcclhPRPDVAFHFSPRFytVKPHVICNTLQGGLWQKEVRWPGIALQKGASF 112
Cdd:smart00908   2 GGLSPGSSITIRGIVLPDAKRFSINLQCG----PNADIALHFNPRF--DEGTIVRNSKQNGKWGKEERSGGFPFQPGQPF 75

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 157821763   113 LILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLDISGDILVKAV 158
Cdd:smart00908  76 ELEILVEEDEFKVAVNGQHFLEFPHRLPLESIDTLEISGDVQLTSV 121
Gal-bind_lectin smart00908
Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are ...
 195-313 4.67e-19

Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction.


:

Pssm-ID: 214904  Cd Length: 122  Bit Score: 81.10  E-value: 4.67e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763   195 PRGLWPGQVIVVRGLVLKEPKDFTLSLRDGA-THVPVTLRASFTDRTL---AWVS-SWGRKKlISAPFLFYPQRFFEVLL 269
Cdd:smart00908   1 PGGLSPGSSITIRGIVLPDAKRFSINLQCGPnADIALHFNPRFDEGTIvrnSKQNgKWGKEE-RSGGFPFQPGQPFELEI 79

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 157821763   270 LCQEGGLKLALNGHGLGATSLdQKALEQLRDLRISGSVHLYCVH 313
Cdd:smart00908  80 LVEEDEFKVAVNGQHFLEFPH-RLPLESIDTLEISGDVQLTSVQ 122
 
Name Accession Description Interval E-value
Gal-bind_lectin smart00908
Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are ...
 33-158 1.22e-44

Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction.


Pssm-ID: 214904  Cd Length: 122  Bit Score: 148.12  E-value: 1.22e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763    33 GGLYAGKMIMLQGVVPRHARRFQVDFQCGcclhPRPDVAFHFSPRFytVKPHVICNTLQGGLWQKEVRWPGIALQKGASF 112
Cdd:smart00908   2 GGLSPGSSITIRGIVLPDAKRFSINLQCG----PNADIALHFNPRF--DEGTIVRNSKQNGKWGKEERSGGFPFQPGQPF 75

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 157821763   113 LILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLDISGDILVKAV 158
Cdd:smart00908  76 ELEILVEEDEFKVAVNGQHFLEFPHRLPLESIDTLEISGDVQLTSV 121
Gal-bind_lectin pfam00337
Galactoside-binding lectin; This family contains galactoside binding lectins. The family also ...
 33-158 1.50e-43

Galactoside-binding lectin; This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5).


Pssm-ID: 459768  Cd Length: 124  Bit Score: 145.48  E-value: 1.50e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763   33 GGLYAGKMIMLQGVVPRHARRFQVDFQCGccLHPRPDVAFHFSPRFYtvKPHVICNTLQGGLWQKEVRWPGIALQKGASF 112
Cdd:pfam00337   2 GGLQPGSSLTIKGIVLPDAQRFSINLQTG--VGPSDDIALHFNPRFD--ENVIVRNSRQNGQWGQEEREGGFPFQPGQPF 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 157821763  113 LILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLDISGDILVKAV 158
Cdd:pfam00337  78 ELTILVGDDHFKIYVNGQHFTTFKHRLPPEDIDALQVRGDVKLTSV 123
GLECT cd00070
Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as ...
 26-158 4.13e-43

Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.


Pssm-ID: 238025  Cd Length: 127  Bit Score: 144.31  E-value: 4.13e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763  26 PYVTTIFGGLYAGKMIMLQGVVPRHARRFQVDFQCGCclhprPDVAFHFSPRFytVKPHVICNTLQGGLWQKEVRWPGIA 105
Cdd:cd00070    1 PYKLPLPGGLKPGSTLTVKGRVLPNAKRFSINLGTGS-----SDIALHFNPRF--DENVIVRNSFLNGNWGPEERSGGFP 73

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 157821763 106 LQKGASFLILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLDISGDILVKAV 158
Cdd:cd00070   74 FQPGQPFELTILVEEDKFQIFVNGQHFFSFPHRLPLESIDYLSINGDVSLTSV 126
Gal-bind_lectin smart00908
Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are ...
 195-313 4.67e-19

Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction.


Pssm-ID: 214904  Cd Length: 122  Bit Score: 81.10  E-value: 4.67e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763   195 PRGLWPGQVIVVRGLVLKEPKDFTLSLRDGA-THVPVTLRASFTDRTL---AWVS-SWGRKKlISAPFLFYPQRFFEVLL 269
Cdd:smart00908   1 PGGLSPGSSITIRGIVLPDAKRFSINLQCGPnADIALHFNPRFDEGTIvrnSKQNgKWGKEE-RSGGFPFQPGQPFELEI 79

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 157821763   270 LCQEGGLKLALNGHGLGATSLdQKALEQLRDLRISGSVHLYCVH 313
Cdd:smart00908  80 LVEEDEFKVAVNGQHFLEFPH-RLPLESIDTLEISGDVQLTSVQ 122
GLECT cd00070
Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as ...
 193-313 1.43e-06

Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.


Pssm-ID: 238025  Cd Length: 127  Bit Score: 46.47  E-value: 1.43e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763 193 ALPRGLWPGQVIVVRGLVLKEPKDFTLSLRDGATHVPVTLRASFTDRTL---AWVS-SWGRKKlISAPFLFYPQRFFEVL 268
Cdd:cd00070    5 PLPGGLKPGSTLTVKGRVLPNAKRFSINLGTGSSDIALHFNPRFDENVIvrnSFLNgNWGPEE-RSGGFPFQPGQPFELT 83

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 157821763 269 LLCQEGGLKLALNGHGLgaTSLDQKA-LEQLRDLRISGSVHLYCVH 313
Cdd:cd00070   84 ILVEEDKFQIFVNGQHF--FSFPHRLpLESIDYLSINGDVSLTSVE 127
Gal-bind_lectin pfam00337
Galactoside-binding lectin; This family contains galactoside binding lectins. The family also ...
 195-313 2.67e-05

Galactoside-binding lectin; This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5).


Pssm-ID: 459768  Cd Length: 124  Bit Score: 43.01  E-value: 2.67e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763  195 PRGLWPGQVIVVRGLVLKEPKDFTLSLRDGA---THVPVTLRASFTDRTL---AWVS-SWGRkKLISAPFLFYPQRFFEV 267
Cdd:pfam00337   1 PGGLQPGSSLTIKGIVLPDAQRFSINLQTGVgpsDDIALHFNPRFDENVIvrnSRQNgQWGQ-EEREGGFPFQPGQPFEL 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 157821763  268 LLLCQEGGLKLALNGHgLGATSLDQKALEQLRDLRISGSVHLYCVH 313
Cdd:pfam00337  80 TILVGDDHFKIYVNGQ-HFTTFKHRLPPEDIDALQVRGDVKLTSVL 124
 
Name Accession Description Interval E-value
Gal-bind_lectin smart00908
Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are ...
 33-158 1.22e-44

Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction.


Pssm-ID: 214904  Cd Length: 122  Bit Score: 148.12  E-value: 1.22e-44
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763    33 GGLYAGKMIMLQGVVPRHARRFQVDFQCGcclhPRPDVAFHFSPRFytVKPHVICNTLQGGLWQKEVRWPGIALQKGASF 112
Cdd:smart00908   2 GGLSPGSSITIRGIVLPDAKRFSINLQCG----PNADIALHFNPRF--DEGTIVRNSKQNGKWGKEERSGGFPFQPGQPF 75

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 157821763   113 LILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLDISGDILVKAV 158
Cdd:smart00908  76 ELEILVEEDEFKVAVNGQHFLEFPHRLPLESIDTLEISGDVQLTSV 121
Gal-bind_lectin pfam00337
Galactoside-binding lectin; This family contains galactoside binding lectins. The family also ...
 33-158 1.50e-43

Galactoside-binding lectin; This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5).


Pssm-ID: 459768  Cd Length: 124  Bit Score: 145.48  E-value: 1.50e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763   33 GGLYAGKMIMLQGVVPRHARRFQVDFQCGccLHPRPDVAFHFSPRFYtvKPHVICNTLQGGLWQKEVRWPGIALQKGASF 112
Cdd:pfam00337   2 GGLQPGSSLTIKGIVLPDAQRFSINLQTG--VGPSDDIALHFNPRFD--ENVIVRNSRQNGQWGQEEREGGFPFQPGQPF 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 157821763  113 LILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLDISGDILVKAV 158
Cdd:pfam00337  78 ELTILVGDDHFKIYVNGQHFTTFKHRLPPEDIDALQVRGDVKLTSV 123
GLECT cd00070
Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as ...
 26-158 4.13e-43

Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.


Pssm-ID: 238025  Cd Length: 127  Bit Score: 144.31  E-value: 4.13e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763  26 PYVTTIFGGLYAGKMIMLQGVVPRHARRFQVDFQCGCclhprPDVAFHFSPRFytVKPHVICNTLQGGLWQKEVRWPGIA 105
Cdd:cd00070    1 PYKLPLPGGLKPGSTLTVKGRVLPNAKRFSINLGTGS-----SDIALHFNPRF--DENVIVRNSFLNGNWGPEERSGGFP 73

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 157821763 106 LQKGASFLILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLDISGDILVKAV 158
Cdd:cd00070   74 FQPGQPFELTILVEEDKFQIFVNGQHFFSFPHRLPLESIDYLSINGDVSLTSV 126
GLECT smart00276
Galectin; Galectin - galactose-binding lectin
 27-160 8.54e-32

Galectin; Galectin - galactose-binding lectin


Pssm-ID: 214596  Cd Length: 128  Bit Score: 115.02  E-value: 8.54e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763    27 YVTTIFGGLYAGKMIMLQGVVPRHARRFQVDFQCGcclhpRPDVAFHFSPRFYtvKPHVICNTLQGGLWQKEVRWPGIAL 106
Cdd:smart00276   1 FTLPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTG-----GDDIALHFNPRFN--ENKIVCNSKLNGSWGSEEREGGFPF 73

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 157821763   107 QKGASFLILFLFDNEEVKVSVNGQHFLHYRYRLPLSRVDTLDISGDILVKAVGF 160
Cdd:smart00276  74 QPGQPFDLTIIVQPDHFQIFVNGVHITTFPHRLPLESIDYLSINGDVQLTSVSF 127
Gal-bind_lectin smart00908
Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are ...
 195-313 4.67e-19

Galactoside-binding lectin; Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction.


Pssm-ID: 214904  Cd Length: 122  Bit Score: 81.10  E-value: 4.67e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763   195 PRGLWPGQVIVVRGLVLKEPKDFTLSLRDGA-THVPVTLRASFTDRTL---AWVS-SWGRKKlISAPFLFYPQRFFEVLL 269
Cdd:smart00908   1 PGGLSPGSSITIRGIVLPDAKRFSINLQCGPnADIALHFNPRFDEGTIvrnSKQNgKWGKEE-RSGGFPFQPGQPFELEI 79

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 157821763   270 LCQEGGLKLALNGHGLGATSLdQKALEQLRDLRISGSVHLYCVH 313
Cdd:smart00908  80 LVEEDEFKVAVNGQHFLEFPH-RLPLESIDTLEISGDVQLTSVQ 122
GLECT smart00276
Galectin; Galectin - galactose-binding lectin
 192-313 7.14e-08

Galectin; Galectin - galactose-binding lectin


Pssm-ID: 214596  Cd Length: 128  Bit Score: 50.30  E-value: 7.14e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763   192 RALPRGLWPGQVIVVRGLVLKEPKDFTLSLRDGATHVPVTLRASFTDRTL---AWV-SSWGRKKLISApFLFYPQRFFEV 267
Cdd:smart00276   3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNENKIvcnSKLnGSWGSEEREGG-FPFQPGQPFDL 81

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 157821763   268 LLLCQEGGLKLALNGHGLgaTSLDQKA-LEQLRDLRISGSVHLYCVH 313
Cdd:smart00276  82 TIIVQPDHFQIFVNGVHI--TTFPHRLpLESIDYLSINGDVQLTSVS 126
GLECT cd00070
Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as ...
 193-313 1.43e-06

Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.


Pssm-ID: 238025  Cd Length: 127  Bit Score: 46.47  E-value: 1.43e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763 193 ALPRGLWPGQVIVVRGLVLKEPKDFTLSLRDGATHVPVTLRASFTDRTL---AWVS-SWGRKKlISAPFLFYPQRFFEVL 268
Cdd:cd00070    5 PLPGGLKPGSTLTVKGRVLPNAKRFSINLGTGSSDIALHFNPRFDENVIvrnSFLNgNWGPEE-RSGGFPFQPGQPFELT 83

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 157821763 269 LLCQEGGLKLALNGHGLgaTSLDQKA-LEQLRDLRISGSVHLYCVH 313
Cdd:cd00070   84 ILVEEDKFQIFVNGQHF--FSFPHRLpLESIDYLSINGDVSLTSVE 127
Gal-bind_lectin pfam00337
Galactoside-binding lectin; This family contains galactoside binding lectins. The family also ...
 195-313 2.67e-05

Galactoside-binding lectin; This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5).


Pssm-ID: 459768  Cd Length: 124  Bit Score: 43.01  E-value: 2.67e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821763  195 PRGLWPGQVIVVRGLVLKEPKDFTLSLRDGA---THVPVTLRASFTDRTL---AWVS-SWGRkKLISAPFLFYPQRFFEV 267
Cdd:pfam00337   1 PGGLQPGSSLTIKGIVLPDAQRFSINLQTGVgpsDDIALHFNPRFDENVIvrnSRQNgQWGQ-EEREGGFPFQPGQPFEL 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 157821763  268 LLLCQEGGLKLALNGHgLGATSLDQKALEQLRDLRISGSVHLYCVH 313
Cdd:pfam00337  80 TILVGDDHFKIYVNGQ-HFTTFKHRLPPEDIDALQVRGDVKLTSVL 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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