NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|119874205|ref|NP_001073308|]
View 

OCIA domain-containing protein 1 isoform 1 [Homo sapiens]

Protein Classification

OCIA domain-containing protein( domain architecture ID 10537162)

OCIA domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
OCIA pfam07051
Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian ...
24-109 7.40e-44

Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian carcinoma immunoreactive antigen (OCIA) and related eukaryotic sequences. The function of this family is unknown.


:

Pssm-ID: 462073  Cd Length: 87  Bit Score: 142.82  E-value: 7.40e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119874205   24 DYIPTEEERRVFAECNDESFWFRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKFK 103
Cdd:pfam07051   2 YYIFSEEERKVLRECNEESFWQRSLPLSLMSGLVTYALVNKGYLSSSPRFGALPKVVFAGLLGYFGGKLSYQKCCAEKFM 81

                  ....*.
gi 119874205  104 KLENSP 109
Cdd:pfam07051  82 RLPNSP 87
 
Name Accession Description Interval E-value
OCIA pfam07051
Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian ...
24-109 7.40e-44

Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian carcinoma immunoreactive antigen (OCIA) and related eukaryotic sequences. The function of this family is unknown.


Pssm-ID: 462073  Cd Length: 87  Bit Score: 142.82  E-value: 7.40e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119874205   24 DYIPTEEERRVFAECNDESFWFRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKFK 103
Cdd:pfam07051   2 YYIFSEEERKVLRECNEESFWQRSLPLSLMSGLVTYALVNKGYLSSSPRFGALPKVVFAGLLGYFGGKLSYQKCCAEKFM 81

                  ....*.
gi 119874205  104 KLENSP 109
Cdd:pfam07051  82 RLPNSP 87
 
Name Accession Description Interval E-value
OCIA pfam07051
Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian ...
24-109 7.40e-44

Ovarian carcinoma immunoreactive antigen (OCIA); This family consists of several ovarian carcinoma immunoreactive antigen (OCIA) and related eukaryotic sequences. The function of this family is unknown.


Pssm-ID: 462073  Cd Length: 87  Bit Score: 142.82  E-value: 7.40e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119874205   24 DYIPTEEERRVFAECNDESFWFRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKFK 103
Cdd:pfam07051   2 YYIFSEEERKVLRECNEESFWQRSLPLSLMSGLVTYALVNKGYLSSSPRFGALPKVVFAGLLGYFGGKLSYQKCCAEKFM 81

                  ....*.
gi 119874205  104 KLENSP 109
Cdd:pfam07051  82 RLPNSP 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH