NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2099348487|ref|NP_001035797|]
View 

TALPID3 protein [Gallus gallus]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
TALPID3 super family cl25881
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ...
 151-1369 0e+00

Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.


The actual alignment was detected with superfamily member pfam15324:

Pssm-ID: 434634 [Multi-domain]  Cd Length: 1288  Bit Score: 1291.38  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  151 DVLISRYPTGQKEALRAVLKQKTRSAPVFKEVKVQLLGNASPErKESVGQDPILTHREADSATTIAAATAAAIATTAPLL 230
Cdd:pfam15324    1 DIFISQYSAGQKDAVRAVLKQRAQSAPVFKEVKVQLLDDACSE-KDAVGPEVQPSPSGIDSATTVAAATAAAIATTAPLI 79

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  231 KVQNDLQAKVNCVSTLLHKLQETDKQLQRVAEQQTNTRTQHEKPHCHERvselEKQMNAFMLQRIHHLEKLQEHQMNIQS 310
Cdd:pfam15324   80 KVQSDLEAKVNSVSELLKKLQETDKQLQRVTEQQTSIQAKQEKSCCHDH----EKQMNAFMEQRLRHLEKIQQQQIDIQT 155

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  311 HFISSAVNMGGLQQTHMPSSSLLTKQSEKAEEQLLNNGISSSQKNFFPSSGLPT-------------------------- 364
Cdd:pfam15324  156 HLIGSALKAVSLQPSSVTSSRAVEKSGNSSEDESPAVGSASTSHHTFAPKQAPLaevrdtqfdrqkspletpaprrfapv 235

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  365 --------------------------QGDGRHLEHILNPQAAPWGQMESSEKTMLTNDKMSWHSEIERPTALQTdscPAY 418
Cdd:pfam15324  236 pvsrdakiskreppkeekenmetsssKGNGRLLEQILNNQDSPTRKSESSVVTSLAMATVGWQPERSRESQPLE---PQS 312

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  419 ENSSQNCNSIEKTVKKADDLLQVLGQLRKEMHDMLQEASSWKS-----DMNDLIKSKPATIASDPP-------------- 479
Cdd:pfam15324  313 FPSSEEPETASVTVQKASDVLQDLGQLKKEMRSLLQTADAFPVpnaksTRSSQSSRSLSPLPTPPPpppapismppvtav 392

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  480 EYNHLVKPSVLQNVKAPNSILSDAKRVLREVQSRKKVLEENLEAVLRAKGGGAMSAFINALTTNRDALEKIRIRKAVDER 559
Cdd:pfam15324  393 SLAALSSPSVLQSTQPPRSMLKDAEKILRQVQNNKKVLEENLEAIIRAKDGAALHSFINALSTNRDMSEEIRIRKTVDEW 472

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  560 IKAISAEIQAEMARNDMEQVKYDQKVPWIKRAQNIKA---MKNSKEIKAKTQKIQGCSTKKPlsaAKSLRNHVEDNISKE 636
Cdd:pfam15324  473 IKTISKEIQDELARKDYEQKRFDQKNRRTAKAQAAKKtsvRRQSKDIKANAQSKTPNKSVIP---RKHFQKQAEEHFRKP 549

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  637 GFRTYFSSESLQRnrkgtDEPMSGCAMVQNEEYLSQIYGKPIYQGHRSTLKKAPYLRFNSPSPKSKLQRPRVIEYVRGTK 716
Cdd:pfam15324  550 PVRSMPASSLQKK-----EGPLKSTTSLQDEDYLLQVYGKAVYQGHRSTLKKGPYLRFNSPSPKSKPQRPKVIESVKGTK 624

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  717 VKSAGTQTCSRAQKAVIS-SKKQHPLYALAQENQYFFSPNRDVPADCGPLEGHLIPMAVPLGQTQINDISVQPAGVVMCK 795
Cdd:pfam15324  625 VKSARTQTDLHATKPVKTdSKMQHSVTAPHQEQQYLFSPSREMPSQSGTLEGHLIPMAIPLGQTQSDSDSPPPAGVIVSK 704

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  796 PHPVTVTTSIPQVPPKPPTEVKKPKVAVIEMRSEKKDPPQLSVQVLPNVDIDSISGGSVSVNH--VLPEPKPARCP-ADA 872
Cdd:pfam15324  705 PHPVTVTTSIPPSSRKPEPGVKKPNIALLEMKSEKKDPPQLTVQVLPSVDIDSVSCSSRDSSPspVLPSPSEASPPlIQT 784

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  873 VIQAPEDIQSEEEDVKFPGTNFTDVTDVVQDqEEERDEIPEFTEPLLEINGHFRVAEPTYNGPSFPPVASAPQQSCDVLD 952
Cdd:pfam15324  785 WIQTPELMKEDEEEVKFPGTNFDEVIDVIQD-EEKEDEIPEFSEPPLEFNRSVKPPSTKYNGPPFPPVVSQPQPTTDILD 863

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  953 EWIERRETIENRLINWVEQEIMAKIISEMYPVQRETVPSVSTSEGEDSETVTSDIVEAAGGGGFQLFIDAGVPVDSEMIS 1032
Cdd:pfam15324  864 KVIEQRETLENRLVDWVEQEIMARIISGMFPQQAQADPDASVSESEPSEPSTSDIVEAAGGGGLQLFVDAGVPVDSEMIR 943

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1033 HLVNEVLSETIATMLGNRQAQEAVPATNLLPSTTAVMEPL-VPTPLPTPQATPPQTPPSEKEMPPVQTPESSPSITELSG 1111
Cdd:pfam15324  944 HFVNEALAETIAIMLGDREAQREPPVAASVPGDLPTKETLlPTPVPTPQPTPPCSPPSPLKEPSPVKTPDSSPCVSEHDF 1023

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1112 DVReQEKMKEAGSDIPAAVSRVGTPVITPISTPPEIITPSPPASEAA----KMENPAPLNPWDDAELPLEEEKPSPLAEE 1187
Cdd:pfam15324 1024 FPV-KEIPPEKGADTGPAVSLVITPTVTPIATPPPAATPTPPLSENSidklKSPSPELPKPWEDSDLPLEEENPNSEQEE 1102

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1188 TfNPKAVEMSVANDEEPEALILPSWQSSPKPFQSLPCEPEAPS--AAPTDSSEQSTQESSLTPTETETADRPISEGEVLF 1265
Cdd:pfam15324 1103 L-HPRAVVMSVARDEEPESVVLPASPPEPKPLAPPPLGAAPPSppQSPSSSSSTLESSSSLTVTETETADRPISEGEILF 1181

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1266 SCDQMLAGR---EGGLSFPNLTESLTSTLQDANEMDYDPPSEGQVVRRSHKGYHRDPVLALLAKLNQAPVAVQEGGYHLE 1342
Cdd:pfam15324 1182 SYGQMLAVRaleEGGLFLPNLNDSLSSSLHDAQEMDYDPPSEGQVIRRPHKKAHHDPILSLLAKMNQGPLSSQQAVYHSE 1261

                         1290      1300
                   ....*....|....*....|....*..
gi 2099348487 1343 DSDSSVGELSEGQRPRLTRAAERILMG 1369
Cdd:pfam15324 1262 DLENSVGELSEGQRPRLTAAAENVLTG 1288
 
Name Accession Description Interval E-value
TALPID3 pfam15324
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ...
 151-1369 0e+00

Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.


Pssm-ID: 434634 [Multi-domain]  Cd Length: 1288  Bit Score: 1291.38  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  151 DVLISRYPTGQKEALRAVLKQKTRSAPVFKEVKVQLLGNASPErKESVGQDPILTHREADSATTIAAATAAAIATTAPLL 230
Cdd:pfam15324    1 DIFISQYSAGQKDAVRAVLKQRAQSAPVFKEVKVQLLDDACSE-KDAVGPEVQPSPSGIDSATTVAAATAAAIATTAPLI 79

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  231 KVQNDLQAKVNCVSTLLHKLQETDKQLQRVAEQQTNTRTQHEKPHCHERvselEKQMNAFMLQRIHHLEKLQEHQMNIQS 310
Cdd:pfam15324   80 KVQSDLEAKVNSVSELLKKLQETDKQLQRVTEQQTSIQAKQEKSCCHDH----EKQMNAFMEQRLRHLEKIQQQQIDIQT 155

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  311 HFISSAVNMGGLQQTHMPSSSLLTKQSEKAEEQLLNNGISSSQKNFFPSSGLPT-------------------------- 364
Cdd:pfam15324  156 HLIGSALKAVSLQPSSVTSSRAVEKSGNSSEDESPAVGSASTSHHTFAPKQAPLaevrdtqfdrqkspletpaprrfapv 235

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  365 --------------------------QGDGRHLEHILNPQAAPWGQMESSEKTMLTNDKMSWHSEIERPTALQTdscPAY 418
Cdd:pfam15324  236 pvsrdakiskreppkeekenmetsssKGNGRLLEQILNNQDSPTRKSESSVVTSLAMATVGWQPERSRESQPLE---PQS 312

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  419 ENSSQNCNSIEKTVKKADDLLQVLGQLRKEMHDMLQEASSWKS-----DMNDLIKSKPATIASDPP-------------- 479
Cdd:pfam15324  313 FPSSEEPETASVTVQKASDVLQDLGQLKKEMRSLLQTADAFPVpnaksTRSSQSSRSLSPLPTPPPpppapismppvtav 392

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  480 EYNHLVKPSVLQNVKAPNSILSDAKRVLREVQSRKKVLEENLEAVLRAKGGGAMSAFINALTTNRDALEKIRIRKAVDER 559
Cdd:pfam15324  393 SLAALSSPSVLQSTQPPRSMLKDAEKILRQVQNNKKVLEENLEAIIRAKDGAALHSFINALSTNRDMSEEIRIRKTVDEW 472

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  560 IKAISAEIQAEMARNDMEQVKYDQKVPWIKRAQNIKA---MKNSKEIKAKTQKIQGCSTKKPlsaAKSLRNHVEDNISKE 636
Cdd:pfam15324  473 IKTISKEIQDELARKDYEQKRFDQKNRRTAKAQAAKKtsvRRQSKDIKANAQSKTPNKSVIP---RKHFQKQAEEHFRKP 549

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  637 GFRTYFSSESLQRnrkgtDEPMSGCAMVQNEEYLSQIYGKPIYQGHRSTLKKAPYLRFNSPSPKSKLQRPRVIEYVRGTK 716
Cdd:pfam15324  550 PVRSMPASSLQKK-----EGPLKSTTSLQDEDYLLQVYGKAVYQGHRSTLKKGPYLRFNSPSPKSKPQRPKVIESVKGTK 624

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  717 VKSAGTQTCSRAQKAVIS-SKKQHPLYALAQENQYFFSPNRDVPADCGPLEGHLIPMAVPLGQTQINDISVQPAGVVMCK 795
Cdd:pfam15324  625 VKSARTQTDLHATKPVKTdSKMQHSVTAPHQEQQYLFSPSREMPSQSGTLEGHLIPMAIPLGQTQSDSDSPPPAGVIVSK 704

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  796 PHPVTVTTSIPQVPPKPPTEVKKPKVAVIEMRSEKKDPPQLSVQVLPNVDIDSISGGSVSVNH--VLPEPKPARCP-ADA 872
Cdd:pfam15324  705 PHPVTVTTSIPPSSRKPEPGVKKPNIALLEMKSEKKDPPQLTVQVLPSVDIDSVSCSSRDSSPspVLPSPSEASPPlIQT 784

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  873 VIQAPEDIQSEEEDVKFPGTNFTDVTDVVQDqEEERDEIPEFTEPLLEINGHFRVAEPTYNGPSFPPVASAPQQSCDVLD 952
Cdd:pfam15324  785 WIQTPELMKEDEEEVKFPGTNFDEVIDVIQD-EEKEDEIPEFSEPPLEFNRSVKPPSTKYNGPPFPPVVSQPQPTTDILD 863

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  953 EWIERRETIENRLINWVEQEIMAKIISEMYPVQRETVPSVSTSEGEDSETVTSDIVEAAGGGGFQLFIDAGVPVDSEMIS 1032
Cdd:pfam15324  864 KVIEQRETLENRLVDWVEQEIMARIISGMFPQQAQADPDASVSESEPSEPSTSDIVEAAGGGGLQLFVDAGVPVDSEMIR 943

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1033 HLVNEVLSETIATMLGNRQAQEAVPATNLLPSTTAVMEPL-VPTPLPTPQATPPQTPPSEKEMPPVQTPESSPSITELSG 1111
Cdd:pfam15324  944 HFVNEALAETIAIMLGDREAQREPPVAASVPGDLPTKETLlPTPVPTPQPTPPCSPPSPLKEPSPVKTPDSSPCVSEHDF 1023

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1112 DVReQEKMKEAGSDIPAAVSRVGTPVITPISTPPEIITPSPPASEAA----KMENPAPLNPWDDAELPLEEEKPSPLAEE 1187
Cdd:pfam15324 1024 FPV-KEIPPEKGADTGPAVSLVITPTVTPIATPPPAATPTPPLSENSidklKSPSPELPKPWEDSDLPLEEENPNSEQEE 1102

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1188 TfNPKAVEMSVANDEEPEALILPSWQSSPKPFQSLPCEPEAPS--AAPTDSSEQSTQESSLTPTETETADRPISEGEVLF 1265
Cdd:pfam15324 1103 L-HPRAVVMSVARDEEPESVVLPASPPEPKPLAPPPLGAAPPSppQSPSSSSSTLESSSSLTVTETETADRPISEGEILF 1181

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1266 SCDQMLAGR---EGGLSFPNLTESLTSTLQDANEMDYDPPSEGQVVRRSHKGYHRDPVLALLAKLNQAPVAVQEGGYHLE 1342
Cdd:pfam15324 1182 SYGQMLAVRaleEGGLFLPNLNDSLSSSLHDAQEMDYDPPSEGQVIRRPHKKAHHDPILSLLAKMNQGPLSSQQAVYHSE 1261

                         1290      1300
                   ....*....|....*....|....*..
gi 2099348487 1343 DSDSSVGELSEGQRPRLTRAAERILMG 1369
Cdd:pfam15324 1262 DLENSVGELSEGQRPRLTAAAENVLTG 1288
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 1126-1234 2.85e-04

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 45.49  E-value: 2.85e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1126 IPAAVSRVGTPVITP---ISTPPEIITPSP-PASEAAKMENPAPLNPWDDAELPLEEEKPSPLAEETFNPkAVEMSVAND 1201
Cdd:PHA03269    15 INLIIANLNTNIPIPelhTSAATQKPDPAPaPHQAASRAPDPAVAPTSAASRKPDLAQAPTPAASEKFDP-APAPHQAAS 93

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 2099348487 1202 EEPEALILPSWQSSPKP-----FQSLPCEPEAPSAAPT 1234
Cdd:PHA03269    94 RAPDPAVAPQLAAAPKPdaaeaFTSAAQAHEAPADAGT 131
 
Name Accession Description Interval E-value
TALPID3 pfam15324
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ...
 151-1369 0e+00

Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.


Pssm-ID: 434634 [Multi-domain]  Cd Length: 1288  Bit Score: 1291.38  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  151 DVLISRYPTGQKEALRAVLKQKTRSAPVFKEVKVQLLGNASPErKESVGQDPILTHREADSATTIAAATAAAIATTAPLL 230
Cdd:pfam15324    1 DIFISQYSAGQKDAVRAVLKQRAQSAPVFKEVKVQLLDDACSE-KDAVGPEVQPSPSGIDSATTVAAATAAAIATTAPLI 79

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  231 KVQNDLQAKVNCVSTLLHKLQETDKQLQRVAEQQTNTRTQHEKPHCHERvselEKQMNAFMLQRIHHLEKLQEHQMNIQS 310
Cdd:pfam15324   80 KVQSDLEAKVNSVSELLKKLQETDKQLQRVTEQQTSIQAKQEKSCCHDH----EKQMNAFMEQRLRHLEKIQQQQIDIQT 155

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  311 HFISSAVNMGGLQQTHMPSSSLLTKQSEKAEEQLLNNGISSSQKNFFPSSGLPT-------------------------- 364
Cdd:pfam15324  156 HLIGSALKAVSLQPSSVTSSRAVEKSGNSSEDESPAVGSASTSHHTFAPKQAPLaevrdtqfdrqkspletpaprrfapv 235

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  365 --------------------------QGDGRHLEHILNPQAAPWGQMESSEKTMLTNDKMSWHSEIERPTALQTdscPAY 418
Cdd:pfam15324  236 pvsrdakiskreppkeekenmetsssKGNGRLLEQILNNQDSPTRKSESSVVTSLAMATVGWQPERSRESQPLE---PQS 312

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  419 ENSSQNCNSIEKTVKKADDLLQVLGQLRKEMHDMLQEASSWKS-----DMNDLIKSKPATIASDPP-------------- 479
Cdd:pfam15324  313 FPSSEEPETASVTVQKASDVLQDLGQLKKEMRSLLQTADAFPVpnaksTRSSQSSRSLSPLPTPPPpppapismppvtav 392

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  480 EYNHLVKPSVLQNVKAPNSILSDAKRVLREVQSRKKVLEENLEAVLRAKGGGAMSAFINALTTNRDALEKIRIRKAVDER 559
Cdd:pfam15324  393 SLAALSSPSVLQSTQPPRSMLKDAEKILRQVQNNKKVLEENLEAIIRAKDGAALHSFINALSTNRDMSEEIRIRKTVDEW 472

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  560 IKAISAEIQAEMARNDMEQVKYDQKVPWIKRAQNIKA---MKNSKEIKAKTQKIQGCSTKKPlsaAKSLRNHVEDNISKE 636
Cdd:pfam15324  473 IKTISKEIQDELARKDYEQKRFDQKNRRTAKAQAAKKtsvRRQSKDIKANAQSKTPNKSVIP---RKHFQKQAEEHFRKP 549

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  637 GFRTYFSSESLQRnrkgtDEPMSGCAMVQNEEYLSQIYGKPIYQGHRSTLKKAPYLRFNSPSPKSKLQRPRVIEYVRGTK 716
Cdd:pfam15324  550 PVRSMPASSLQKK-----EGPLKSTTSLQDEDYLLQVYGKAVYQGHRSTLKKGPYLRFNSPSPKSKPQRPKVIESVKGTK 624

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  717 VKSAGTQTCSRAQKAVIS-SKKQHPLYALAQENQYFFSPNRDVPADCGPLEGHLIPMAVPLGQTQINDISVQPAGVVMCK 795
Cdd:pfam15324  625 VKSARTQTDLHATKPVKTdSKMQHSVTAPHQEQQYLFSPSREMPSQSGTLEGHLIPMAIPLGQTQSDSDSPPPAGVIVSK 704

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  796 PHPVTVTTSIPQVPPKPPTEVKKPKVAVIEMRSEKKDPPQLSVQVLPNVDIDSISGGSVSVNH--VLPEPKPARCP-ADA 872
Cdd:pfam15324  705 PHPVTVTTSIPPSSRKPEPGVKKPNIALLEMKSEKKDPPQLTVQVLPSVDIDSVSCSSRDSSPspVLPSPSEASPPlIQT 784

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  873 VIQAPEDIQSEEEDVKFPGTNFTDVTDVVQDqEEERDEIPEFTEPLLEINGHFRVAEPTYNGPSFPPVASAPQQSCDVLD 952
Cdd:pfam15324  785 WIQTPELMKEDEEEVKFPGTNFDEVIDVIQD-EEKEDEIPEFSEPPLEFNRSVKPPSTKYNGPPFPPVVSQPQPTTDILD 863

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487  953 EWIERRETIENRLINWVEQEIMAKIISEMYPVQRETVPSVSTSEGEDSETVTSDIVEAAGGGGFQLFIDAGVPVDSEMIS 1032
Cdd:pfam15324  864 KVIEQRETLENRLVDWVEQEIMARIISGMFPQQAQADPDASVSESEPSEPSTSDIVEAAGGGGLQLFVDAGVPVDSEMIR 943

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1033 HLVNEVLSETIATMLGNRQAQEAVPATNLLPSTTAVMEPL-VPTPLPTPQATPPQTPPSEKEMPPVQTPESSPSITELSG 1111
Cdd:pfam15324  944 HFVNEALAETIAIMLGDREAQREPPVAASVPGDLPTKETLlPTPVPTPQPTPPCSPPSPLKEPSPVKTPDSSPCVSEHDF 1023

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1112 DVReQEKMKEAGSDIPAAVSRVGTPVITPISTPPEIITPSPPASEAA----KMENPAPLNPWDDAELPLEEEKPSPLAEE 1187
Cdd:pfam15324 1024 FPV-KEIPPEKGADTGPAVSLVITPTVTPIATPPPAATPTPPLSENSidklKSPSPELPKPWEDSDLPLEEENPNSEQEE 1102

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1188 TfNPKAVEMSVANDEEPEALILPSWQSSPKPFQSLPCEPEAPS--AAPTDSSEQSTQESSLTPTETETADRPISEGEVLF 1265
Cdd:pfam15324 1103 L-HPRAVVMSVARDEEPESVVLPASPPEPKPLAPPPLGAAPPSppQSPSSSSSTLESSSSLTVTETETADRPISEGEILF 1181

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1266 SCDQMLAGR---EGGLSFPNLTESLTSTLQDANEMDYDPPSEGQVVRRSHKGYHRDPVLALLAKLNQAPVAVQEGGYHLE 1342
Cdd:pfam15324 1182 SYGQMLAVRaleEGGLFLPNLNDSLSSSLHDAQEMDYDPPSEGQVIRRPHKKAHHDPILSLLAKMNQGPLSSQQAVYHSE 1261

                         1290      1300
                   ....*....|....*....|....*..
gi 2099348487 1343 DSDSSVGELSEGQRPRLTRAAERILMG 1369
Cdd:pfam15324 1262 DLENSVGELSEGQRPRLTAAAENVLTG 1288
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 1126-1234 2.85e-04

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 45.49  E-value: 2.85e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2099348487 1126 IPAAVSRVGTPVITP---ISTPPEIITPSP-PASEAAKMENPAPLNPWDDAELPLEEEKPSPLAEETFNPkAVEMSVAND 1201
Cdd:PHA03269    15 INLIIANLNTNIPIPelhTSAATQKPDPAPaPHQAASRAPDPAVAPTSAASRKPDLAQAPTPAASEKFDP-APAPHQAAS 93

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 2099348487 1202 EEPEALILPSWQSSPKP-----FQSLPCEPEAPSAAPT 1234
Cdd:PHA03269    94 RAPDPAVAPQLAAAPKPdaaeaFTSAAQAHEAPADAGT 131
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH